association	dataset	threshold value	standardized value
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855231
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03884
NCIH661	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54051
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05017
HS 578T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64824
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7518
NUDUL1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.03501
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70848
KYSE-70	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.943812
KYSE180	CCLE Cell Line Gene CNV Profiles	1.0	1.84843
A-431	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03884
BICR18	CCLE Cell Line Gene CNV Profiles	1.0	1.69791
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23239
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28144
NCIH23	CCLE Cell Line Gene CNV Profiles	-1.0	-2.26206
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29805
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23412
NCIH1755	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33392
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991807
NCI-H520	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
lung	GTEx Tissue Gene Expression Profiles	1.0	0.913029
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56709
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8533
LP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855231
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48302
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04839
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851963
SNU1214	CCLE Cell Line Gene CNV Profiles	1.0	1.63648
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29805
HGC27	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49024
OCIM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70708
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851963
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991807
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35768
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.11034
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851963
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10131
EFO21	CCLE Cell Line Gene CNV Profiles	1.0	1.54778
LC-1-SQ	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.99285
T84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27897
HCC15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65802
U-937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05704
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05704
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15884
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15884
SNU475	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54445
pancreas	GTEx Tissue Gene Expression Profiles	-1.0	-0.825391
OVKATE	CCLE Cell Line Gene CNV Profiles	1.0	1.79899
KASUMI2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04322
spleen	GTEx Tissue Gene Expression Profiles	1.0	0.850678
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.898767
NCI-H460	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.99285
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13728
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.930149
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64824
UACC-257	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
Nrf-2	MotifMap Predicted Transcription Factor Targets	1.0	null
CTF1	MotifMap Predicted Transcription Factor Targets	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39035
NCI-H520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44722
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991807
liver	GTEx Tissue Gene Expression Profiles	-1.0	-1.09029
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15884
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834093
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-2.10021
fallopian tube	GTEx Tissue Gene Expression Profiles	1.0	0.837436
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04839
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39035
OVCAR-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928188
HCC1897	CCLE Cell Line Gene CNV Profiles	1.0	1.73259
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8533
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
TE5	CCLE Cell Line Gene CNV Profiles	1.0	1.36706
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03284
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8533
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12094
KYSE-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
NU-DUL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.23271
RERF-LC-SQ1	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
SNU626	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49024
TE-10	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
BGC823	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37455
MDA-MB-134-VI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.21031
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48302
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62857
HPAF-II	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64824
NCIH2170	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41411
SC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.897266
NCIH650	CCLE Cell Line Gene CNV Profiles	-1.0	-2.57875
AP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.87157
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18583
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.99285
VMRCLCP	CCLE Cell Line Gene CNV Profiles	1.0	2.00624
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35768
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23307
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04839
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.59626
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27897
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60009
KNS62	CCLE Cell Line Gene CNV Profiles	1.0	1.33709
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80131
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39035
SKHEP1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45398
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.99285
pituitary	GTEx Tissue Gene Expression Profiles	1.0	2.10979
IGROV-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10094
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991807
TE10	CCLE Cell Line Gene CNV Profiles	1.0	2.58967
CAOV3	CCLE Cell Line Gene CNV Profiles	1.0	1.75713
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
LC1SQSF	CCLE Cell Line Gene CNV Profiles	1.0	1.73196
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855231
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05017
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
NCI-H1648	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
EMX2	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.81926
CAL-85-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
NCIH1648	CCLE Cell Line Gene CNV Profiles	1.0	1.42919
RAMOS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.997182
HS 294T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
RERFLCSQ1	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48302
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29805
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991807
HCC95	CCLE Cell Line Gene CNV Profiles	1.0	2.11186
TE441T	CCLE Cell Line Gene CNV Profiles	-1.0	-2.87011
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17294
NF-E2	MotifMap Predicted Transcription Factor Targets	1.0	null
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.997182
LUDLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.3758
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58027
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18583
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35768
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44722
TT	CCLE Cell Line Gene CNV Profiles	1.0	1.45216
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35768
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17294
BFTC-905	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851963
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	-1.0	-2.27201
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
SNU503	CCLE Cell Line Gene CNV Profiles	1.0	1.80924
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
DB	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77085
NCI-H1304	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.49241
A549	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36554
DOV13	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78233
NCIH1435	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76397
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002
RDES	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46306
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869329
KARPAS-422	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.897266
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61615
MC116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.897266
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.991807
TLX1::NFIC	MotifMap Predicted Transcription Factor Targets	1.0	null
ISTMES2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.93104
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05017
Evx-1	MotifMap Predicted Transcription Factor Targets	1.0	null
NCIH520	CCLE Cell Line Gene CNV Profiles	1.0	2.06218
NFE2L2	MotifMap Predicted Transcription Factor Targets	1.0	null
T47D	CCLE Cell Line Gene CNV Profiles	1.0	1.52822
JHH6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6181
PANC 04.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05704
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15884
SNU899	CCLE Cell Line Gene CNV Profiles	1.0	1.34271
KYSE70	CCLE Cell Line Gene CNV Profiles	1.0	1.95914
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00069
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851963
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
nicotine_rattus norvegicus_gpl2896_gse13311	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SNU-423	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.901002