association dataset threshold value standardized value Lung adenocarcinoma_LUAD_TCGA-78-7542-01A-21R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_HepG2_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_11103_KO_Depdc5_SRP219943 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.06194 primary visual cortex (striate cortex, area V1/17)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.88021 Perturb_6864_KO_CDK8_SRP299261 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Perturb_9005_KD_GATA6_SRP014027 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 12.7123 H3K4me3_fibroblast of lung_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null GTEX-POMQ-1926-SM-3NB1Y GTEx Tissue Sample Gene Expression Profiles 1.0 0.895741 COLO320 CCLE Cell Line Gene CNV Profiles 1.0 1.62566 H3K4me1_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ATF3_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null single-organism cellular process GO Biological Process Annotations 2015 1.0 null GTEX-POMQ-0326-SM-2I5FO GTEx Tissue Sample Gene Expression Profiles 1.0 0.9658 ZBTB7A ENCODE Transcription Factor Targets 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I7-01A-21R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TP63_01_329 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 0.59086 GTEX-RVPU-0011-R9A-SM-3NM8E GTEx Tissue Sample Gene Expression Profiles -1.0 -1.98062 16273092-TableS1c GeneSigDB Published Gene Signatures 1.0 null TG(20:1(11Z)/20:1(11Z)/20:1(11Z)) HMDB Metabolites of Enzymes 1.0 null baicalein CTD Gene-Chemical Interactions 1.0 null POLR2A_lung_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-POMQ-2126-SM-2S1OJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.17072 20081105-ST-1 GeneSigDB Published Gene Signatures 1.0 null SW 1463 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.894387 H3K9ac_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76323 CTCF_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:0/18:0/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-RTLS-2626-SM-46MUJ GTEx Tissue Sample Gene Expression Profiles 1.0 2.44974 GTEX-SUCS-1426-SM-4DM5W GTEx Tissue Sample Gene Expression Profiles -1.0 -0.903842 MAX_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_U-87 MG_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TSE9-0526-SM-3DB7Z GTEx Tissue Sample Gene Expression Profiles 1.0 1.94241 Hypercholesterolemia CTD Gene-Disease Associations 1.0 1.30208 PPARG ChEA Transcription Factor Targets 1.0 null NCI-H358 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.23256 BACH1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null esophagus HPA Tissue Protein Expression Profiles 1.0 0.776827 H3K4me3_SK-N-SH_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null 3t3-l1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.510992 mononuclear cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.272649 EGR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RFX5_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7437-01A-21R-2132-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-4652-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 TRIM28_U2OS_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null lateral nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.35217 hsa-miR-4708-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 H2AFZ_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X4XX-0011-R6B-SM-46MWP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.947279 A-375 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.6085 Perturb_15192_OE_LEF1_SRP406316 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -5.67853 H3K4me3_fibroblast of lung_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null prdm1_00000000_e9dot5_placenta_lof_mouse_gpl6887_gse39584 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.866266 GTEX-X261-0011-R6B-SM-4E3J8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.65584 H3K4me2_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WYBS-0426-SM-3NM9M GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04136 Infralimbic area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15448 EZH2_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null central nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.04436 superficial stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04805 OVMANA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.10324 Perturb_1240_KD_SRSF3_SRP033393 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 8.20229 Anterior cingulate area, dorsal part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26512 facial motor nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.0011 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6959-11A-01R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-TSE9-0626-SM-3DB8B GTEx Tissue Sample Gene Expression Profiles 1.0 1.90964 posterior (caudal) superior temporal cortex (area 22c)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.99711 excretory gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null MYC_UP.V1 MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations -1.0 null intracellular membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.375818 Perturb_14282_KD_NUAK1_ERP105393 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 H3K9ac_Colon Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SW962 COSMIC Cell Line Gene Mutation Profiles 1.0 null Perturb_18150_KO_Shp2_SRP285005 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 Perturb_6564_KO_Gja1_SRP377031 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.20902 nucleus accumbens, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.845877 Perturb_4401_KO_STING1_SRP191307 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 NCI-H1435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 3.05305 acquired immunodeficiency syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.416521 HCC366 CCLE Cell Line Gene CNV Profiles 1.0 1.63111 GTEX-U3ZN-2226-SM-3DB88 GTEx Tissue Sample Gene Expression Profiles 1.0 0.969818 Simian Acquired Immune Deficiency Syndrome_T lymphocyte_GSE4785 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.61826 GTEX-P44H-0011-R4A-SM-2XCEW GTEx Tissue Sample Gene Expression Profiles -1.0 -2.23344 H3K4me3_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Micronuclei, Chromosome-Defective CTD Gene-Disease Associations 1.0 1.72758 Weight Gain CTD Gene-Disease Associations 1.0 2.02361 TG(16:1(9Z)/16:1(9Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K4me3_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QVUS-0011-R6A-SM-3GACX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0107 amygdaloid complex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.959796 NCIH358 CCLE Cell Line Gene CNV Profiles 1.0 1.32763 TG(18:1(9Z)/16:0/20:2(11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null cortico-medial group, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.887005 GTEX-NL3H-0011-R1a-SM-48TDJ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.98217 H3K9ac_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-P4QS-1326-SM-3NMCD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.44508 MKN-45 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10515 MAFK_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55F-0011-R6A-SM-2TF4L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.61578 GTEX-VUSG-1426-SM-3GIJN GTEx Tissue Sample Gene Expression Profiles 1.0 2.49988 H1_Derived_Neuronal_Progenitor_Cultured_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -0.892085 POLR2A_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_2143_KO_ASCC3_SRP282634 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Perturb_17817_KO_Nr1d1_ERP120331 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.0941 Fatty acid, triacylglycerol, and ketone body metabolism Reactome Pathways 2014 1.0 null Precancerous Conditions CTD Gene-Disease Associations 1.0 1.86602 duodenum HPA Tissue Protein Expression Profiles 1.0 0.776827 hsa-miR-495 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 KMS11 CCLE Cell Line Gene CNV Profiles 1.0 1.41589 GTEX-S341-0008-SM-4AD6D GTEx Tissue Sample Gene Expression Profiles -1.0 -1.43112 Urogenital Abnormalities CTD Gene-Disease Associations 1.0 1.28456 FOS_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NPJ8-0011-R6a-SM-2HMKB GTEx Tissue Sample Gene Expression Profiles -1.0 -0.873081 OCILY10 CCLE Cell Line Gene CNV Profiles -1.0 -1.96513 G112 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.942947 Perturb_3784_KD_TGM5_SRP041162 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 Tetracosanoyl-CoA HMDB Metabolites of Enzymes 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A6B1-01A-12R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TG(18:1(11Z)/18:0/18:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Ovarian Neoplasms CTD Gene-Disease Associations 1.0 1.17034 OCT4_KD_GDS1824_135_mouse_embryonic stem (ES) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Perturb_14964_KO_Zfp30_ERP109794 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -3.42934 POLR2AphosphoS5_SK-N-MC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null rectum HPA Tissue Protein Expression Profiles 1.0 0.776827 TG(16:1(9Z)/18:1(9Z)/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null RUNX1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-POYW-1326-SM-48TCG GTEx Tissue Sample Gene Expression Profiles 1.0 1.67305 E2F6_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.253127 TAF1 ENCODE Transcription Factor Targets 1.0 null Perturb_3162_KO_Smarcd3_SRP044338 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -13.5609 GTEX-TMMY-1326-SM-4DXU9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12142 Infralimbic area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.9716 ChIP_H3K9me3_19884255_mouseESC ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-S4P3-0006-SM-3K2AW GTEx Tissue Sample Gene Expression Profiles 1.0 1.63913 GTEX-XUJ4-0004-SM-4BOQE GTEx Tissue Sample Gene Expression Profiles -1.0 -2.48955 GTEX-RUSQ-1926-SM-2TF6K GTEx Tissue Sample Gene Expression Profiles -1.0 -0.832164 hsa-miR-4778-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 GTEX-XPT6-0126-SM-4B65S GTEx Tissue Sample Gene Expression Profiles 1.0 0.906066 GTEX-P4QR-0726-SM-2I5GO GTEx Tissue Sample Gene Expression Profiles 1.0 2.0424 H3K27ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null lung cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.065658 rosiglitazone_mus musculus_gpl1261_gse11343 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null GTEX-TKQ2-0006-SM-33HBH GTEx Tissue Sample Gene Expression Profiles 1.0 0.849983 DICER1_Deficiency_GDS3685_518_mouse_Hepatocytes GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-V1D1-0006-SM-3NMCE GTEx Tissue Sample Gene Expression Profiles 1.0 0.988342 TG(18:3(9Z,12Z,15Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso6] HMDB Metabolites of Enzymes 1.0 null MXI1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ChIP_SUZ12_16625203 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null ventricular (matrix) zone of cerebellum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.01097 RCOR1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null organ system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.276514 cerebellar cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.55473 H3K4me3_H7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:5(7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Perturb_130_KD_Tcf7l2_SRP100171 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.43745 zona incerta Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06892 GTEX-UPK5-0003-SM-3NMDI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.27879 TG(18:3(9Z,12Z,15Z)/18:2(9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A118-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Coenzyme A HMDB Metabolites of Enzymes 1.0 null H3K4me1_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mediodorsal nucleus of thalamus_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.17035 Atherosclerosis CTD Gene-Disease Associations 1.0 1.63049 EZH2-18974828-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Arthritis, Experimental CTD Gene-Disease Associations 1.0 1.12391 GTEX-XXEK-0004-SM-4BRWO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1188 MYB_01_48 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 2.63801 Brain Lower Grade Glioma_LGG_TCGA-DU-5872-02A-21R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HA-E2F1_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA_MEF2C_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null H3K4me1_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null periventricular stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.80854 H3K27ac_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-N7MS-0011-R4a-SM-2HMKW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0291 H3K4me1_Fetal Lung Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SW 780 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.19937 POLR2AphosphoS5_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null fasciola cinerea Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18414 Perturb_785_OE_Irf3_SRP074478 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.15283 cellular process GO Biological Process Annotations 2015 1.0 null HT115 CCLE Cell Line Gene CNV Profiles -1.0 -1.68293 CHK1_KD_GSE54267_672_human_U2OS GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null TG(18:1(9Z)/18:1(11Z)/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null NMCG1 CCLE Cell Line Gene Expression Profiles 1.0 1.42054 2-Methylhexanoyl-CoA HMDB Metabolites of Enzymes 1.0 null TG(16:1(9Z)/14:0/16:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-SJXC-0526-SM-2XCFG GTEx Tissue Sample Gene Expression Profiles 1.0 1.24565 OV7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25384 GTEX-NL3H-0011-R7a-SM-2I3G5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12881 H3K4me3_Brain Mid Frontal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Hyperglycemia CTD Gene-Disease Associations 1.0 1.41285 H3K4me3_SK-N-SH_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WHWD-0005-SM-3LK7D GTEx Tissue Sample Gene Expression Profiles 1.0 1.95563 Perturb_3689_KD_NUF2_SRP352847 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 ventrolateral prefrontal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.914787 H3K4me3_A549_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null hsa-let-7d TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 NCI-H441 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.865188 urogenital system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.23362 AHR ChEA Transcription Factor Targets 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.08309 Perturb_6094_KD_ZNF207_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 MTF2-20144788-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null H2AFZ_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_Peripheral Blood Mononuclear Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null nasopharynx HPA Tissue Protein Expression Profiles 1.0 0.776827 H3K4me3_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RM2N-1826-SM-2TF5B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22064 PHF8 ENCODE Transcription Factor Targets 1.0 null GTEX-XOTO-0011-R6B-SM-4B65X GTEx Tissue Sample Gene Expression Profiles -1.0 -1.34327 pyrazinamide_mus musculus_gpl6246_gse48027 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-PLZ6-0006-SM-33HBZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.19086 RNF2 ChEA Transcription Factor Targets 1.0 null POLR2A_A549_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null choroid plexus of the lateral ventricle Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.837164 gpat3 GeneRIF Biological Term Annotations 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/16:0/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null cerebellar cortex_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.22798 H3K4me1_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_foreskin fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WM-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Carcinoma, Squamous Cell CTD Gene-Disease Associations 1.0 1.20196 Dorsal peduncular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.55981 ventral posterolateral nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16644 daudi HPA Cell Line Gene Expression Profiles -1.0 -1.22085 primary somatosensory cortex (area S1, areas 3,1,2)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.09473 GTEX-X8HC-0526-SM-4E3JA GTEx Tissue Sample Gene Expression Profiles 1.0 0.876438 16728581-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null tachyzoite TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.69102 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10U-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pancreatitis CTD Gene-Disease Associations 1.0 1.05052 GTEX-WL46-0011-R5A-SM-3LK6V GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0232 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null emboliform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.872678 TG(16:0/20:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_GM06990_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null ventrolateral prefrontal cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.963699 Retrosplenial area, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.32419 CHD1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_8500_OE_RAS_SRP150620 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 9.73011 Perturb_1702_KI_HMGA2_SRP128920 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 9.76065 TG(15:0/16:0/20:2(11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-PSDG-0526-SM-2S1OH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.914688 hsa-miR-3679-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 TG(18:1(11Z)/16:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null hsa-miR-4646-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 GTEX-W5X1-1426-SM-3GIKH GTEx Tissue Sample Gene Expression Profiles 1.0 3.22733 TG(15:0/18:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2885-03A-01T-0735-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A54R-11A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null progesterone_homo sapiens_gpl570_gse29437 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null ZKSCAN1 ENCODE Transcription Factor Targets 1.0 null cos cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.219485 hMPV_12Hour_18234263_GSE8961 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 3.30995 cdp-diacylglycerol biosynthetic process GO Biological Process Annotations 2015 1.0 null Interposed nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.17086 H3K4me3_fibroblast of skin of abdomen_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Butyryl-CoA HMDB Metabolites of Enzymes 1.0 null Kidney Neoplasms CTD Gene-Disease Associations 1.0 1.17431 H3K4me3_CD4+ CD25- CD45RA+ Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-GL-6846-11A-01R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-XV7Q-0826-SM-4BRV7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.18039 Diarrhea CTD Gene-Disease Associations 1.0 1.38752 ZBTB33 ENCODE Transcription Factor Targets 1.0 null GTEX-XLM4-0426-SM-4AT54 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.859061 Entorhinal area, medial part, dorsal zone, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.02062 15273739-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null SUM 229PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.98936 H3K9ac_Muscle Satellite Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MYC_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_A549_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null SRY ChEA Transcription Factor Targets 1.0 null H3K4me3_keratinocyte_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null metastasis GeneRIF Biological Term Annotations 1.0 null cellular_component COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.511233 H3K4me3_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5882-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPA ChEA Transcription Factor Targets 1.0 null TG(18:1(9Z)/18:1(9Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-V955-0426-SM-3GAEL GTEx Tissue Sample Gene Expression Profiles 1.0 1.41046 GTEX-XPT6-0008-SM-4B64Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.83868 toxoplasmosis DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.62381 intracellular membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 H3K4me3_epithelial cell of esophagus_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null AP-1 MotifMap Predicted Transcription Factor Targets 1.0 null TG(16:0/18:0/18:0)[iso3] HMDB Metabolites of Enzymes 1.0 null TG(15:0/18:1(9Z)/16:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null STAT3_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GABPA ENCODE Transcription Factor Targets 1.0 null digestive gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052837 subcallosal cingulate gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.48136 H3K9me3_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null Perturb_12264_KD_DDX18_SRP385779 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 TG(18:2(9Z,12Z)/20:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null ARNT ChEA Transcription Factor Targets 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7183-11A-01R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CEBPB_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_3761_KD_VPS28_SRP325061 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.52294 Vascular Diseases CTD Gene-Disease Associations 1.0 1.31656 CTCF_GM12878_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_1192_KO_NRF2_SRP235550 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 posterodorsal tegmental nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.50407 H3K4me1_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null TG(16:1(9Z)/18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-O5YV-0008-SM-4E3HP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36158 MOLM-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.840231 Uterine Carcinosarcoma_UCS_TCGA-ND-A4WC-01A-21R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-UTHO-0726-SM-3GAEN GTEx Tissue Sample Gene Expression Profiles 1.0 1.27006 mantle zone of r9Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16018 lateral medullary reticular group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.04389 TG(20:0/20:1(11Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null hsa-miR-4489 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 H3K4me3_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null cell part GO Cellular Component Annotations 2015 1.0 null BMI1 ChEA Transcription Factor Targets 1.0 null POLR2A_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CUX1 ENCODE Transcription Factor Targets 1.0 null H3K27ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-O5YW-0008-SM-4E3IE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03305 Neoplasm Invasiveness CTD Gene-Disease Associations 1.0 1.14404 CEBPB_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-1236 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 MAX_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Nausea CTD Gene-Disease Associations 1.0 1.45141 TG(18:0/16:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-U4B1-1926-SM-3DB9E GTEx Tissue Sample Gene Expression Profiles -1.0 -0.853613 Entorhinal area, medial part, dorsal zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.4763 H3K9me3_G1E-ER4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPB_myocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MO-0226-SM-32QOL GTEx Tissue Sample Gene Expression Profiles 1.0 1.45246 H3K4me2_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(18:2(9Z,12Z)/18:2(9Z,12Z)/18:2(9Z,12Z)) HMDB Metabolites of Enzymes 1.0 null AHR-22903824-MCF7-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Duodenum Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-RU72-0011-R7A-SM-2TF5U GTEx Tissue Sample Gene Expression Profiles -1.0 -1.87004 external granular (germinal) layer of lower rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.02519 adult stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.119991 GTEX-S341-0626-SM-4AD5T GTEx Tissue Sample Gene Expression Profiles 1.0 1.13058 genetic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.042981 leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.073789 SIN3A_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null neoplasm by anatomical site GWASdb SNP-Phenotype Associations 1.0 0.045118 hsa-let-7a TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 GTEX-QDT8-0011-R4A-SM-32PKM GTEx Tissue Sample Gene Expression Profiles -1.0 -0.874456 H3K9ac_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null FARAGE COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K27ac_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null excretory gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.297447 RELA JASPAR Predicted Transcription Factor Targets 1.0 null medial habenular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.22224 principal sensory nucleus of trigeminal nerve, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.16899 FOXL1 JASPAR Predicted Transcription Factor Targets 1.0 null 18614019-TableS4c GeneSigDB Published Gene Signatures 1.0 null episupraoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05967 KDM4A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARS-ddORF6_72Hour_23935999_GSE47961 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.61858 claustrum, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.938022 SIN3A_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_H1 BMP4 Derived Trophoblast Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ribavirin_homo sapiens_gpl570_gds4391 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null JEKO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.09184 Perturb_16657_OE_MIR200C_SRP308493 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.85233 SNU423 CCLE Cell Line Gene CNV Profiles -1.0 -1.63715 Perturb_16521_KD_ASXL3_SRP247927 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 TG(16:0/16:1(9Z)/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null SP in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.971302 BHLHE40_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_H7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6961-01A-21R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CEBPB_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null IGROV-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.05827 Perturb_5968_KD_SUV39H1_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -13.456 breast carcinoma GWASdb SNP-Phenotype Associations 1.0 0.486163 EP300_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null bounding membrane of organelle GO Cellular Component Annotations 2015 1.0 null embryo TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.060963 nucleus accumbens, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.08398 Sarcoma_SARC_TCGA-K1-A3PO-01A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S33H-1226-SM-4AD69 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29591 hsa-miR-936 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 pou5f1_16518401_mesc_lof_mouse_gpl1261_gds1824 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.377293 TG(18:3(9Z,12Z,15Z)/18:2(9Z,12Z)/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null retrohypothalamic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.42805 Anterior hypothalamic nucleus, anterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.57645 PPARG-20887899-3T3-L1 PREADIPOCYTE CELLS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Cystitis CTD Gene-Disease Associations 1.0 1.21599 GTEX-RTLS-2326-SM-46MUH GTEx Tissue Sample Gene Expression Profiles 1.0 0.919603 GTEX-UPK5-0008-SM-4IHJD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01622 pretectal nuclear complex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.939769 GTEX-WYJK-1626-SM-3NM9J GTEx Tissue Sample Gene Expression Profiles 1.0 0.909243 globose nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.02476 DAOY CCLE Cell Line Gene CNV Profiles -1.0 -1.48661 GTEX-XUW1-0005-SM-4BOQ7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.943188 H3K4me3_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-3613-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 Perturb_11257_KO_Pparg_SRP294559 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -13.363 Skin Diseases CTD Gene-Disease Associations 1.0 1.17333 H3K4me3_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null igg immunoglobulin complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.405971 ETS2_KD_GSE43459_687_human_H441 lung cancer cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Primary somatosensory area, upper limb, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.46165 TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Perturb_15030_Mut_Csf33_SRP347624 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 GTEX-NPJ7-0011-R5a-SM-33HBK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.37613 LN-229 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.34126 FOSL2_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_HCT116_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null kidney_c HPA Tissue Sample Gene Expression Profiles 1.0 1.16348 head of caudate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.29402 CTCF_GM06990_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SK-MEL-31 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.04935 Perturb_14234_KO_Rtcb_SRP350289 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 Kidney renal clear cell carcinoma_KIRC_TCGA-B8-4619-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r4 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.34106 H3K4me3_Jurkat_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCIH146 CCLE Cell Line Gene CNV Profiles -1.0 -2.62272 GTEX-WWYW-0826-SM-3NB2X GTEx Tissue Sample Gene Expression Profiles 1.0 1.28344 DU4475 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.56712 choroid plexus of the fourth ventricle Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.9339 Perturb_17296_KO_Sox8/Sox9_ERP014609 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 A-Vietnam-1203_CIP048_RG3-2004(H5N1)_24Hour_None_GSE43203 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.61428 TG(20:4(5Z,8Z,11Z,14Z)/18:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-77-7140-01A-41R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of p2B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11172 dorsal raphe nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03959 TG(16:0/18:2(9Z,12Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null SUZ12-18692474-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null Anterior cingulate area, ventral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60504 GTEX-U3ZH-1926-SM-4DXTR GTEx Tissue Sample Gene Expression Profiles 1.0 1.07823 WSU-NHL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.895955 H3K27me3_iPS DF 19.11 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me1_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.363567 Fibrosis CTD Gene-Disease Associations 1.0 2.20752 Perturb_17699_KO_Pds5a_SRP365503 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 11.8459 anterior (rostral) cingulate (medial prefrontal) cortex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.860561 H3K4me3_astrocyte of the cerebellum_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TG(15:0/20:1(11Z)/14:0)[iso6] HMDB Metabolites of Enzymes 1.0 null carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.054865 Neoplasms CTD Gene-Disease Associations 1.0 2.14317 SIN3A_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/18:1(11Z)/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(18:1(9Z)/18:2(9Z,12Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-SNMC-0008-SM-4DM5A GTEx Tissue Sample Gene Expression Profiles -1.0 -0.836529 Perturb_6370_KD_ETV1_SRP124661 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.69008 encephalitis DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.745172 rostral ventral respiratory cell group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.6126 periaqueductal gray substance, ventral portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.32027 HS-SULTAN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.962372 H3K4me3_HepG2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2803 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.948077 ventrolateral preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10628 direct GeneRIF Biological Term Annotations 1.0 null testis TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null autosomal genetic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.044448 Brain Lower Grade Glioma_LGG_TCGA-DU-7007-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:1(9Z)/18:1(9Z)/22:1(13Z))[iso3] HMDB Metabolites of Enzymes 1.0 null ovary GTEx Tissue Gene Expression Profiles 1.0 0.88789 RNF2-18974828-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null TG(16:1(9Z)/20:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_astrocyte of the cerebellum_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Posterolateral visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03028 SETDB1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIG-M5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.874341 Kidney renal clear cell carcinoma_KIRC_TCGA-B8-4622-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_epithelial cell of proximal tubule_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QMRM-0005-SM-3NB2A GTEx Tissue Sample Gene Expression Profiles 1.0 1.41433 Brain Lower Grade Glioma_LGG_TCGA-P5-A5F6-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_astrocyte of the spinal cord_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null paraterminal gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.5065 GTEX-QMR6-0011-R6A-SM-32PKP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.1885 POLR2A ENCODE Transcription Factor Targets 1.0 null Crotonoyl-CoA HMDB Metabolites of Enzymes 1.0 null TG(20:1(11Z)/20:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K27ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XMK1-0008-SM-4GICF GTEx Tissue Sample Gene Expression Profiles -1.0 -2.27424 primary metabolic process GO Biological Process Annotations 2015 1.0 null catalytic activity GO Molecular Function Annotations 2015 1.0 null H3K27ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null OLIG2-23332759-OLIGODENDROCYTES-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null TYK-NU Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.56774 lung giant cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.908965 Cardiomegaly CTD Gene-Disease Associations 1.0 1.27039 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7429-01A-11R-2132-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-T2IS-0626-SM-32QP6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.844854 H3K4me3_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TG(16:1(9Z)/14:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-X4XX-0011-R5A-SM-46MWN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0061 Pristanoyl-CoA HMDB Metabolites of Enzymes 1.0 null microenvironment GeneRIF Biological Term Annotations 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7146-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PHGDH_KO_GDS2874_125_mouse_embryonic head tissue GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null intermediate (interpositus) cerebellar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0395 progesterone_homo sapiens_gpl570_gse29435 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-T5JC-1526-SM-4DM68 GTEx Tissue Sample Gene Expression Profiles 1.0 1.14229 TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:3(9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null apical part of cell COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.182723 Cholestasis CTD Gene-Disease Associations 1.0 1.68889 mRNA_EOMES_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-U3ZG-0001-SM-47JYF GTEx Tissue Sample Gene Expression Profiles -1.0 -2.50348 TFAP2C_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:1(9Z)/16:1(9Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null hsa-miR-4773 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 Perturb_100_KD_Pabpn1_SRP318863 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.40667 Lung adenocarcinoma_LUAD_TCGA-73-4666-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Uterine Cervical Neoplasms CTD Gene-Disease Associations 1.0 1.48993 ben cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.1585 MAX ENCODE Transcription Factor Targets 1.0 null TOLEDO CCLE Cell Line Gene CNV Profiles 1.0 1.43419 GSK3_INHIBITION_GDS4043_459_human_MLL leukemia cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null familial adenomatous polyposis DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.359657 Perturb_13713_KO_ASXL2_SRP360138 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.77111 PML ENCODE Transcription Factor Targets 1.0 null NOTCH1_Deficiency_GDS2848_635_mouse_Hair follicles GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-T6MO-0006-SM-32QOU GTEx Tissue Sample Gene Expression Profiles 1.0 1.45255 SNU886 CCLE Cell Line Gene CNV Profiles -1.0 -1.85619 GTEX-U8T8-2326-SM-3DB96 GTEx Tissue Sample Gene Expression Profiles 1.0 0.957538 SIN3A_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-let-7g TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 GTEX-P4QS-0008-SM-48TDY GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09116 CHD4 ENCODE Transcription Factor Targets 1.0 null Poisoning CTD Gene-Disease Associations 1.0 1.74721 H3K9me3_G1E_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null SIN3A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMARCC1 ENCODE Transcription Factor Targets 1.0 null hsa-miR-3129-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5877-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF384_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NR3C1 ENCODE Transcription Factor Targets 1.0 null H3K4me1_Brain Mid Frontal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ZNF143_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_13090_KO_Atm_SRP062722 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5978-01A-11R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null peripheral nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null hsa-miR-23c TargetScan Predicted Conserved microRNA Targets 1.0 0.828473 RCOR1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null biological_process GO Biological Process Annotations 2015 1.0 null TG(18:1(11Z)/16:0/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null JUN ENCODE Transcription Factor Targets 1.0 null Prostatic Neoplasms CTD Gene-Disease Associations 1.0 1.01062 hsa-miR-3117-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 BHLHE40_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_astrocyte of the spinal cord_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] HMDB Metabolites of Enzymes 1.0 null SK-MEL-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.975068 H3K4me3_iPS DF 6.9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null hsa-miR-3675-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 urogenital system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null r10 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30097 GTEX-RWS6-0001-SM-3NMAL GTEx Tissue Sample Gene Expression Profiles -1.0 -1.5675 GTEX-XUJ4-0005-SM-4BOQ6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.11549 intermediate stratum of PcPL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21684 amygdaloid complex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.55471 GTEX-RN64-0626-SM-2TC5V GTEx Tissue Sample Gene Expression Profiles 1.0 0.839616 Perturb_6743_OE_jouvence_SRP288327 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 arcuate nucleus of medulla, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.55347 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7044-11A-01R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PX3G-1026-SM-48TZW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.835636 PHF8_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r7 part of the dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09899 eGFP-GATA2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:2(9Z,12Z)/18:1(9Z)/18:3(6Z,9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null COLO-678 COSMIC Cell Line Gene Mutation Profiles 1.0 null adiposetissue BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.46784 NUGC-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 OCIMY5 CCLE Cell Line Gene CNV Profiles -1.0 -1.42723 Parasubiculum, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03184 H2AFZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:2(9Z,12Z)/18:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null intermediate stratum of JcPL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21978 CTCF_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Hyperplasia CTD Gene-Disease Associations 1.0 2.30123 GTEX-X4XY-0006-SM-46MV2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.853863 CDK9_knockdown_71_GSE21751 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -3.21172 19489030-SuppTable7 GeneSigDB Published Gene Signatures 1.0 null medial mammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.831639 Brain Injuries CTD Gene-Disease Associations 1.0 1.0561 urinary bladder HPA Tissue Protein Expression Profiles 1.0 0.776827 UBTF_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC2_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1581 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.50854 nucleus sagulum, superficial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05468 TG(16:0/18:1(9Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null PANC 04.03 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.11942 H3K27me3_cardiac mesoderm_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null phosphate-containing compound metabolic process GO Biological Process Annotations 2015 1.0 null H3K27ac_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCC461 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.86383 Retrosplenial area, ventral part, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 4.39072 H3K4me2_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null A-Vietnam-1203_CIP048_RG3-2004(H5N1)mutPB1-F2del_24Hour_None_GSE43203 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.46312 POLR2A_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1648 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null Cardiovascular Abnormalities CTD Gene-Disease Associations 1.0 1.12219 CTCF_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CA4 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.44444 POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:1(11Z)/14:0/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-X4XY-0008-SM-46MVL GTEx Tissue Sample Gene Expression Profiles -1.0 -1.44857 Gastrointestinal Diseases CTD Gene-Disease Associations 1.0 1.01249 GTEX-XQ3S-1426-SM-4BOPR GTEx Tissue Sample Gene Expression Profiles -1.0 -0.832847 H3K4me3_CD4+ CD25+ CD127- Treg Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ETS2_KD_GDS5040_129_human_H441 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null H3K27me3_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XPT6-2026-SM-4B64V GTEx Tissue Sample Gene Expression Profiles 1.0 1.80399 H3K4me3_MEL cell line_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null ZNF143_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA_CDX2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null CTCF_mammary epithelial cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WRHU-1026-SM-4E3ID GTEx Tissue Sample Gene Expression Profiles 1.0 2.10513 H3K4me3_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-PWOO-0006-SM-2I3E3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.05239 Perturb_12263_KD_DDX18_SRP385779 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 urinary tract TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null claustrum, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.17062 SW872 COSMIC Cell Line Gene Mutation Profiles 1.0 null TRIM28_knockout_302_GSE32224 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.57381 ChIP_PHC1_16625203 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Perturb_9766_KO_Shp2_SRP285005 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 10.6458 hsa-miR-4720-5p TargetScan Predicted Conserved microRNA Targets 1.0 1.26663 GTEX-OXRP-0326-SM-33HBJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.12756 Right_Ventricle Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 0.89441 CBX3_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/18:1(9Z)/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(16:0/16:0/16:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(18:0/18:1(9Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null whole body TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.23362 GTEX-WL46-0626-SM-3LK7R GTEx Tissue Sample Gene Expression Profiles 1.0 0.925981 GTEX-U4B1-0726-SM-4DXUA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03169 MYC ENCODE Transcription Factor Targets 1.0 null BRAF_overexpression_180_GSE46801 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 0.675401 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-WVLH-0011-R7A-SM-3MJFB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.4705 HMGN3 ENCODE Transcription Factor Targets 1.0 null deferasirox_homo sapiens_gpl570_gds3558 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Perturb_11086_KO_Atf6_SRP332137 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 8.07938 Perturb_13645_OE_miR23_SRP067253 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.77308 BMI1-23680149-NPCS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null MAFK_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r11 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76323 Hypertrophy CTD Gene-Disease Associations 1.0 1.89216 Entorhinal area, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.96559 GTEX-OHPL-0006-SM-3MJHB GTEx Tissue Sample Gene Expression Profiles 1.0 0.885072 Pneumonia CTD Gene-Disease Associations 1.0 1.73698 H3K4me2_H1 BMP4 Derived Trophoblast Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ChIP_K27me3_17603471_mouseNPC ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null CHD2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null epithelial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.05741 thyroid gland HPA Tissue Protein Expression Profiles 1.0 0.776827 USF2 JASPAR Predicted Transcription Factor Targets 1.0 null Field CA3, stratum lacunosum-moleculare Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05794 POLR2A_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R53T-0926-SM-3GADH GTEx Tissue Sample Gene Expression Profiles 1.0 0.926952 cos-7 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.326067 Perturb_11606_KD_ALOX5_SRP113334 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.96373 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5435-01A-01R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_5714_KO_Dgcr8_SRP043436 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 dorsolateral part of Med Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10282 Acute Myeloid Leukemia_LAML_TCGA-AB-2859-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COLO-783 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null CTCF_GM12864_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-DA-A3F5-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:0/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null hsa-miR-4463 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 Perturb_4600_KO_Mettl3_SRP048598 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 GTEX-X4XY-0826-SM-4E3JM GTEx Tissue Sample Gene Expression Profiles 1.0 0.95582 TCF12_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_GM12867_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TEAD4_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null LPA(0:0/16:0) HMDB Metabolites of Enzymes 1.0 null parolfactory gyri, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.19706 Liver Neoplasms CTD Gene-Disease Associations 1.0 2.04892 epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.054565 GTEX-SN8G-0001-SM-3NM8L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.61769 GTEX-P78B-1626-SM-2S1O1 GTEx Tissue Sample Gene Expression Profiles 1.0 0.932916 CREM-20920259-GC1-SPG-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null TG(18:1(11Z)/16:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null POLR2A_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTF2F1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null parasitic infectious disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.946186 MXI1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-NL4W-0011-R4a-SM-2I5GZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02472 hsa-let-7f TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 GTEX-WFJO-0226-SM-3GIKW GTEx Tissue Sample Gene Expression Profiles 1.0 1.43262 UM-UC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10515 POLR2A_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null KARPAS422 CCLE Cell Line Gene CNV Profiles -1.0 -1.73231 TG(18:0/18:2(9Z,12Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null 20081105-ST-2 GeneSigDB Published Gene Signatures 1.0 null GTEX-NL3H-0011-R4a-SM-2I3GK GTEx Tissue Sample Gene Expression Profiles -1.0 -0.842436 oculomotor nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.09727 layer 1 of ERCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.14946 r9 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.024 LPA(0:0/18:0) HMDB Metabolites of Enzymes 1.0 null Perturb_8748_OE_SRC_SRP131095 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -12.1862 Immune System Diseases CTD Gene-Disease Associations 1.0 1.69846 gpat4 GeneRIF Biological Term Annotations 1.0 null YY1_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_6430_KD_FUBP1_SRP110582 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -14.4414 CPC-N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.14757 H3K27me3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X585-2426-SM-46MW2 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.962915 Lung squamous cell carcinoma_LUSC_TCGA-63-A5MJ-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-O5YT-0007-SM-32PK7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.851944 MAX_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OIZG-0226-SM-2TC5L GTEx Tissue Sample Gene Expression Profiles 1.0 1.43664 head of caudate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.50048 breast cancer GWASdb SNP-Disease Associations 1.0 0.570595 POLR2AphosphoS5_neural cell_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_BE2C_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H2AFZ_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 2-Methylbutyryl-CoA HMDB Metabolites of Enzymes 1.0 null posteromedial visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25817 H3K27me3_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5891-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PML_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XBEC-0008-SM-4AT3X GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39131 cell culture TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.390799 marrow cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.155774 H3K27ac_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Exanthema CTD Gene-Disease Associations 1.0 1.30727 esr1_21299862_mcf7_lof_human_gpl570_gds4065 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.088178 Thyroid Diseases CTD Gene-Disease Associations 1.0 1.2437 RT-112 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.53819 exons GeneRIF Biological Term Annotations 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3387-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-P78B-0008-SM-48TE1 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.889233 TG(18:1(9Z)/18:1(9Z)/18:1(9Z))[iso] HMDB Metabolites of Enzymes 1.0 null hsa-miR-498 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 TCC-PAN2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.853309 Anterolateral visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.39266 TG(18:2(9Z,12Z)/18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Acetyl-CoA HMDB Metabolites of Enzymes 1.0 null gallbladder HPA Tissue Protein Expression Profiles 1.0 0.776827 spinal column TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.214576 H3K4me3_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null EB1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.29712 CA2 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07915 PEER CCLE Cell Line Gene CNV Profiles 1.0 2.22021 Hyperalgesia CTD Gene-Disease Associations 1.0 1.72137 Bladder Urothelial Carcinoma_BLCA_TCGA-ZF-AA4N-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QV44-0526-SM-2S1RE GTEx Tissue Sample Gene Expression Profiles 1.0 0.919635 Nephritis CTD Gene-Disease Associations 1.0 1.08019 NRL_Deficiency_GDS1693_239_mouse_Photoreceptors cells of retinas at 4 weeks GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Pyramus (VIII), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05912 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null Lung adenocarcinoma_LUAD_TCGA-62-A471-01A-12R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RB1_KD_GSE50532_627_human_OSTEOBLASTS GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Sarcoma_SARC_TCGA-DX-A2J4-01A-32R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null embryonic kidney cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.313683 H3K27me3_cardiac mesoderm_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XBEW-0008-SM-4AT3Y GTEx Tissue Sample Gene Expression Profiles -1.0 -1.2912 personality disorder GWASdb SNP-Disease Associations 1.0 0.937304 putamen, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.10088 GTEX-X261-0011-R7A-SM-4E3JJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.7299 Perturb_11252_KO_Med13_SRP302233 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 7.3645 GTEX-QEG4-0426-SM-33HC3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.33391 3Z-dodecenoyl-CoA HMDB Metabolites of Enzymes 1.0 null Perturb_10872_KO_fatp2_SRP229353 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 7.14563 GTEX-R53T-1626-SM-3GAEW GTEx Tissue Sample Gene Expression Profiles 1.0 0.980836 effects GeneRIF Biological Term Annotations 1.0 null H3K4me3_Adipose Nuclei Roadmap Epigenomics Histone Modification Site Profiles 1.0 null mRNA_MYOD1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null RMUG-S Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.09184 A673 CCLE Cell Line Gene CNV Profiles -1.0 -1.71362 TG(16:0/20:1(11Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null PANC0403 CCLE Cell Line Gene CNV Profiles 1.0 1.43921 PAX5_GM12892_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_BJ_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5890-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Paraflocculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04805 GATA3_T47D_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null RERF-LC-MS Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.994125 H3K4me3_cardiac mesoderm_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null 17483317-TableS5 GeneSigDB Published Gene Signatures 1.0 null DOK COSMIC Cell Line Gene Mutation Profiles 1.0 null Perturb_16937_KO_An_SRP287147 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -12.6046 H3K4me3_ES-E14_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null LPA(0:0/18:2(9Z,12Z)) HMDB Metabolites of Enzymes 1.0 null hsa-miR-4509 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 Kidney Diseases CTD Gene-Disease Associations 1.0 2.15055 Perturb_6438_KD_BAT1_SRP191579 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 CEBPB_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r7 part of cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30765 kidney TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 GTEX-XOTO-0011-R5A-SM-4B657 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.97938 GTEX-WHPG-0626-SM-3NMBD GTEx Tissue Sample Gene Expression Profiles 1.0 1.54941 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7055-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cellular biosynthetic process GO Biological Process Annotations 2015 1.0 null Perturb_10270_KO_Camk2d_SRP281889 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -4.97512 Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3443-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_5351_KO_Dux_SRP201141 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.29516 H3K9ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MXI1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Retrosplenial area, dorsal part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.63977 GTEX-P4PQ-0005-SM-2HMKJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.5001 G120 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.0731 GTEX-XUYS-0326-SM-47JX2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.0812 Kidney Tubular Necrosis, Acute CTD Gene-Disease Associations 1.0 1.13586 endoplasmic reticulum LOCATE Curated Protein Localization Annotations 1.0 null Thrombosis CTD Gene-Disease Associations 1.0 1.13621 H3K27ac_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TG(18:1(9Z)/18:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null G111 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.69831 Migraine Disorders CTD Gene-Disease Associations 1.0 1.01739 NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.945885 CTNNB1-20460455-HCT116-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Perturb_158_KD_Prmt1_SRP360688 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -12.5923 Tachycardia, Ventricular CTD Gene-Disease Associations 1.0 1.15055 H3K4me3_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ELF1 ENCODE Transcription Factor Targets 1.0 null OVCA 420 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.28883 sirolimus_homo sapiens_gpl6244_gse15703 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null COLO 829 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.80377 TG(12:0/12:0/12:0) HMDB Metabolites of Enzymes 1.0 null Glycerol 3-phosphate HMDB Metabolites of Enzymes 1.0 null HCC2108 CCLE Cell Line Gene Expression Profiles 1.0 1.64939 H3K4me3_CD14-positive monocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null played GeneRIF Biological Term Annotations 1.0 null inner SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.876994 FOS_MCF 10A_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null Acrylyl-CoA HMDB Metabolites of Enzymes 1.0 null Heart Diseases CTD Gene-Disease Associations 1.0 1.88688 Perturb_8806_KD_SON_SRP279434 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 Acute Myeloid Leukemia_LAML_TCGA-AB-2943-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ELK1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO 699 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.28133 H3K4me3_fibroblast of lung_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XUZC-0126-SM-4BOO6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.854863 GTEX-OHPM-2626-SM-33HC5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.37658 SMAD2 ChEA Transcription Factor Targets 1.0 null Pleural Effusion CTD Gene-Disease Associations 1.0 1.1437 Perturb_8983_KD_MEOX2_SRP362177 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 phospholipid metabolic process GO Biological Process Annotations 2015 1.0 null TRIM21 Hub Proteins Protein-Protein Interactions 1.0 null Hyperlipidemias CTD Gene-Disease Associations 1.0 1.1786 cochlear nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.5837 GTEX-PWO3-0926-SM-2I5EY GTEx Tissue Sample Gene Expression Profiles -1.0 -0.979292 TG(18:1(11Z)/16:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null immunoglobulin complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.380429 in situ carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.210589 HDAC2_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10R-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null microsomal GeneRIF Biological Term Annotations 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7238-11A-01R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S4Z8-0006-SM-3K2AQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.26337 H3K4me1_Neurosphere Cultured Cells Ganglionic Eminence Derived Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-4115-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Anemia CTD Gene-Disease Associations 1.0 1.30299 bronchus HPA Tissue Protein Expression Profiles 1.0 0.776827 NCI-H1648 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.39733 Coma CTD Gene-Disease Associations 1.0 1.07199 TG(20:4(5Z,8Z,11Z,14Z)/14:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null protozoan form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.30253 C-33-A COSMIC Cell Line Gene Mutation Profiles 1.0 null HCC2279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.94205 Perturb_10656_OE_Gdf2_SRP244969 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 11.05 nes HPA Cell Line Gene Expression Profiles -1.0 -1.33818 H3K27me3_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3374-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-SIU7-0926-SM-4BRX1 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11903 fastigial nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.978025 TG(16:0/16:0/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-WYBS-1926-SM-3NM8N GTEx Tissue Sample Gene Expression Profiles 1.0 0.932207 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5985-11A-01R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBP_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_Adipose Nuclei Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null cytoplasmic part LOCATE Curated Protein Localization Annotations 1.0 null sporozoan form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.44543 Sleep Initiation and Maintenance Disorders CTD Gene-Disease Associations 1.0 1.12872 CTCF_GM12871_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null insulin GeneRIF Biological Term Annotations 1.0 null Edema CTD Gene-Disease Associations 1.0 2.23527 H3K4me3_cardiac muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null tissues GeneRIF Biological Term Annotations 1.0 null Prostate adenocarcinoma_PRAD_TCGA-2A-A8VT-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null organism form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.611346 mediodorsal nucleus of thalamus_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.846753 H3K9ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QV44-2226-SM-447A3 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.850268 primary motor cortex (area M1, area 4)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.849819 intermediate stratum of r9Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04643 UACC-257 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 SK-N-FI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.05729 GTEX-RVPU-0011-R3A-SM-2XCAE GTEx Tissue Sample Gene Expression Profiles -1.0 -4.12799 L-363 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.899091 TG(18:1(9Z)/18:1(9Z)/20:3(8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-RWSA-0626-SM-2XCBD GTEx Tissue Sample Gene Expression Profiles 1.0 1.20677 TG(16:0/20:0/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null KU812 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.1483 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null acylglycerol metabolic process GO Biological Process Annotations 2015 1.0 null UBTF ENCODE Transcription Factor Targets 1.0 null 18614019-TableS4d GeneSigDB Published Gene Signatures 1.0 null GTEX-WFG7-0008-SM-4LMKB GTEx Tissue Sample Gene Expression Profiles -1.0 -0.966619 CAL-12T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.09392 H3K4me3_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mRNA_T_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null nih-3t3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.193702 Rectum adenocarcinoma_READ_TCGA-AH-6547-01A-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_12663_KD_SLNCR1_SRP070082 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -8.6315 Cerebral Hemorrhage CTD Gene-Disease Associations 1.0 1.16434 ChIP_EED_16625203 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Perturb_383_KD_NFE2L2_SRP158498 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.8216 H3K4me3_Caco-2_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null ERG ChEA Transcription Factor Targets 1.0 null Pruritus CTD Gene-Disease Associations 1.0 1.44436 membrane part GO Cellular Component Annotations 2015 1.0 null posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.951806 TG(20:4(5Z,8Z,11Z,14Z)/18:2(9Z,12Z)/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null fulvestrant_homo sapiens_gpl570_gse22533 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null raw-264.7 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.333763 GTEX-Q2AI-0006-SM-2I3FG GTEx Tissue Sample Gene Expression Profiles 1.0 1.39791 GTEX-W5WG-1126-SM-4LMK4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.899492 GTEX-PLZ4-2826-SM-3P617 GTEx Tissue Sample Gene Expression Profiles 1.0 1.13587 H3K4me3_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-HZ-7924-01A-11R-2156-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cytoplasmic vesicle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.078036 Entorhinal area, medial part, dorsal zone, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.2528 NALM-6 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.5212 female reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null H3K4me3_bronchial epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_megakaryocyte_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null FOS_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Decanoyl-CoA (n-C10:0CoA) HMDB Metabolites of Enzymes 1.0 null Paraventricular hypothalamic nucleus, magnocellular division Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.73644 H3K9ac_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Uterine Carcinosarcoma_UCS_TCGA-NA-A4QW-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H1915 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.872658 Perturb_10778_KO_Xbp1_SRP051964 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 3.84558 GTEX-PW2O-0826-SM-48TC5 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.893225 TG(18:1(9Z)/16:0/20:5(5Z,8Z,11Z,14Z,17Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Breast Neoplasms CTD Gene-Disease Associations 1.0 1.82901 TG(15:0/18:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of the aortic adventitia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/18:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Mesothelioma_MESO_TCGA-NQ-A57I-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mediodorsal nucleus of thalamus_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.40756 Entorhinal area, medial part, dorsal zone, layer 6 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10437 PANC 04.03 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.07656 MAX_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null integument TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053312 Nerve Degeneration CTD Gene-Disease Associations 1.0 1.63317 ELK1 ENCODE Transcription Factor Targets 1.0 null SMAD2-18955504-HaCaT-human ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-R55E-0011-R5A-SM-2TC5N GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06564 Perturb_7836_KD_SOD1_SRP135989 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 Dorsal peduncular area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.41044 TP63_01_326 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 0.59086 medial ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.897532 GTEX-WXYG-0005-SM-3NB3M GTEx Tissue Sample Gene Expression Profiles 1.0 0.921296 H3K9ac_Stomach Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null glycerolipid metabolic process GO Biological Process Annotations 2015 1.0 null Dizziness CTD Gene-Disease Associations 1.0 1.08301 H3K4me1_Duodenum Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ATF3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_CH12.LX_mm9_5 ENCODE Histone Modification Site Profiles 1.0 null duodenum HPA Tissue Gene Expression Profiles 1.0 0.952608 STAT3_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPIB JASPAR Predicted Transcription Factor Targets 1.0 null HCFC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null parolfactory gyri, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.2953 Perturb_3299_KO_Bmpr1a_SRP116199 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -3.78743 glycerolipid biosynthetic process GO Biological Process Annotations 2015 1.0 null posterior (caudal) superior temporal cortex (area 22c)_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.22633 Brain Lower Grade Glioma_LGG_TCGA-DU-7290-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAFK_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SPI1 ChEA Transcription Factor Targets 1.0 null body wall TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.67984 H3K27ac_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EZH2_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary auditory cortex (core)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.302 NCI-H1092 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.893117 H4K20me1_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null prepositus hypoglossal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.38019 CEBPB_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55C-0005-SM-3GAE9 GTEx Tissue Sample Gene Expression Profiles 1.0 0.929167 Isovaleryl-CoA HMDB Metabolites of Enzymes 1.0 null CREB1 ENCODE Transcription Factor Targets 1.0 null H3K4me3_fibroblast of upper leg skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Pedunculopontine nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34564 TG(18:2(9Z,12Z)/20:1(11Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null 18818702-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null TYK-NU.CP-R Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.909538 EZH2_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_kidney_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-X4XX-0008-SM-46MVK GTEx Tissue Sample Gene Expression Profiles -1.0 -0.910245 connective tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.288514 ubiquitously GeneRIF Biological Term Annotations 1.0 null ESR2_01_229 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 1.71 TG(20:4(5Z,8Z,11Z,14Z)/18:2(9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-66-2766-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null eGFP-FOS_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Anterior pretectal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13238 Lung squamous cell carcinoma_LUSC_TCGA-56-7223-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2M5-06A-12R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_12613_KD_SON_SRP278179 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 cyst TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.801459 H3K4me3_HL-60_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_WI38_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null TG(18:0/16:0/18:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null NR1H3-23393188-ATHEROSCLEROTIC-FOAM-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me2_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null A-Netherlands-602-2009(H1N1)_36Hour_None_GSE40844 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 3.0726 r3 part of magnocellular medial vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03758 CHD2 ENCODE Transcription Factor Targets 1.0 null H3K4me3_cardiac fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null MAFK_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null lipogenic GeneRIF Biological Term Annotations 1.0 null H3K4me3_cardiac mesoderm_hg19_8 ENCODE Histone Modification Site Profiles 1.0 null doxorubicin_homo sapiens_gpl6947_gse25741 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null FOXA2_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 16365179-TableA2 GeneSigDB Published Gene Signatures 1.0 null p1 part of the substantia nigra reticulata Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.50509 H4K5ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null cytoplasmic part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 Perturb_155_OE_Tmbim1_SRP319129 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 SC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.873811 H3K4me1_Brain Inferior Temporal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ChIP_H3K27me3_17603471_mouseESC ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null POLR2AphosphoS5_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:2(9Z,12Z)/18:1(11Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null CAMA-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.951674 GTEX-R55E-0011-R6A-SM-2TC5T GTEx Tissue Sample Gene Expression Profiles -1.0 -0.829157 POLR2A_HeLa-S3_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-N7MT-0011-R3a-SM-2I3GC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.896975 SIRT1_KO_GDS3666_295_mouse_liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null NCI-H1373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.80039 Urinary Bladder Neoplasms CTD Gene-Disease Associations 1.0 1.83717 HDAC2 ENCODE Transcription Factor Targets 1.0 null Orbital area, ventrolateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07167 TG(16:0/18:1(9Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null Polyuria CTD Gene-Disease Associations 1.0 1.17893 TG(18:2(9Z,12Z)/18:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null SIN3A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA_FOXJ2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null oocyte BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.4016 H3K9me3_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_SK-N-MC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-Q1-A73P-01A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.995523 viscus TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Prostatic Diseases CTD Gene-Disease Associations 1.0 1.13793 breast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.057594 CAL 27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.33605 cochlear nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.828 Inflammation CTD Gene-Disease Associations 1.0 2.39446 membrane GO Cellular Component Annotations 2015 1.0 null HCC1954 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.02064 embryoday10.5 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.928087 GTEX-XGQ4-1026-SM-4AT4L GTEx Tissue Sample Gene Expression Profiles 1.0 1.40279 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A44O-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.885848 GTEX-S7PM-0011-R5A-SM-3NM8G GTEx Tissue Sample Gene Expression Profiles -1.0 -1.66055 PHC1-16625203-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null H513 COSMIC Cell Line Gene Mutation Profiles 1.0 null FLI1-21571218-MEGAKARYOCYTES-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null RARG ChEA Transcription Factor Targets 1.0 null cytoplasm COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.446069 H3K4me3_MCF-7_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null lateral part of JcP Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00852 superior olivary complex, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.20249 periventricular stratum of PO1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16342 H3K4me1_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null amygdaloid complex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.43314 H3K27me3_cardiac mesoderm_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QMR6-0008-SM-447AV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.937426 CTCF_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Intracranial Hypertension CTD Gene-Disease Associations 1.0 1.06771 primary auditory cortex (core)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.848271 GTEX-NL3H-0011-R6a-SM-2I3G8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.46118 eGFP-JUNB_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SARS-BatSRBD_48Hour_23935999_GSE47960 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.55286 viscus TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 Abdominal Pain CTD Gene-Disease Associations 1.0 1.06188 H3K4me3_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null regulation of intracellular signal transduction GO Biological Process Annotations 2015 1.0 null H3K27ac_CD4 Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-WFG8-0008-SM-4LVN6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0952 Perturb_5154_KO_Dcr_SRP038929 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 4.9444 Medial preoptic nucleus, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0514 CP67-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-WYBS-1226-SM-3NM9N GTEx Tissue Sample Gene Expression Profiles 1.0 1.51493 TG(18:1(11Z)/18:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null UBTF_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null body of caudate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.857906 mRNA_GADD45A_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null KMS-12-PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.09465 gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null fertilizedegg BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.946379 layer IIIu of area 35r Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.07589 Perturb_10621_OE_Mst1_SRP398098 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 HDAC2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null adaptation GeneRIF Biological Term Annotations 1.0 null Perturb_16455_KO_CHUK_SRP229998 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 biosynthetic process GO Biological Process Annotations 2015 1.0 null H3K4me3_brain microvascular endothelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A4-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null smallintestine_4a HPA Tissue Sample Gene Expression Profiles 1.0 1.0376 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5887-11A-01R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LIN28A_01_215 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 2.84178 GTEX-RU72-0326-SM-2TF5T GTEx Tissue Sample Gene Expression Profiles 1.0 0.902759 TG(8:0/8:0/8:0) HMDB Metabolites of Enzymes 1.0 null Liver Diseases CTD Gene-Disease Associations 1.0 2.20832 GTEX-NL4W-0011-R5a-SM-2I3GD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.946416 GTEX-WRHK-0005-SM-3MJF5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.34438 Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3B6-01A-21R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PDK1_knockout_80_GSE26290 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 0.0844 TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) HMDB Metabolites of Enzymes 1.0 null TG(16:0/16:0/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null E2F1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRN-1326-SM-3LK5V GTEx Tissue Sample Gene Expression Profiles 1.0 0.978937 RNF2-16625203-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null principal sensory nucleus of trigeminal nerve Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.988279 internal granular layer of CbHCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03505 Cardiomyopathies CTD Gene-Disease Associations 1.0 1.42101 GTEX-V1D1-0226-SM-4JBHG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28941 H3K4me3_Brain Germinal Matrix Roadmap Epigenomics Histone Modification Site Profiles 1.0 null POLR2A_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null r10 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18751 behavioral abnormality GWASdb SNP-Phenotype Associations 1.0 0.123679 head TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.279307 FLI1 ChEA Transcription Factor Targets 1.0 null nucleus coeruleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.857709 Neurologic Manifestations CTD Gene-Disease Associations 1.0 1.04868 H3K4me1_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of pedal digit skin_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ZMIZ1 ENCODE Transcription Factor Targets 1.0 null not applicable_cell type comparison_GSE49439_365_human_podocytes and progenitors GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null lung epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.362273 HIF1A_DEPLETION_GDS2760_642_human_Hypoxic MCF-7 breast cancer cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null MS751 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.00167 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null hsa-miR-455-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 posterior (caudal) superior temporal cortex (area 22c)_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.888972 TG(18:3(9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null male reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null 20174566-TableS1 GeneSigDB Published Gene Signatures 1.0 null GTEX-XV7Q-1726-SM-4BRUU GTEx Tissue Sample Gene Expression Profiles 1.0 2.24999 E2F6_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SRF-21415370-HL-1-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Perturb_688_KD_ASAP2_SRP406127 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 TCF7L2 ENCODE Transcription Factor Targets 1.0 null Phospholipid/glycerol acyltransferase InterPro Predicted Protein Domain Annotations 1.0 null PHC1 ChEA Transcription Factor Targets 1.0 null UBTF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_148_KD_Zfp407_SRP051775 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 personality disorder GWASdb SNP-Phenotype Associations 1.0 0.825497 embryonic fibroblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.10059 Parasubiculum, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.74936 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5696-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null secretory cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.261284 Rectum adenocarcinoma_READ_TCGA-CI-6622-01A-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Entorhinal area, medial part, dorsal zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14475 regulation of cellular process GO Biological Process Annotations 2015 1.0 null internal male genital organ TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null TG(16:0/16:0/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-5678-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OHPN-0011-R4A-SM-2I5FD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.89907 Lung adenocarcinoma_LUAD_TCGA-78-7220-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WH7G-0008-SM-4LVNM GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28146 primary auditory cortex (core)_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.04815 CEBPA-23403033-LIVER-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null CA SKI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.84105 monocytic leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.196246 phosphatidic acid metabolic process GO Biological Process Annotations 2015 1.0 null MDA-MB-435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.893677 Retrochiasmatic area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34564 cellular_component GO Cellular Component Annotations 2015 1.0 null MAZ ENCODE Transcription Factor Targets 1.0 null MAX_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_bone marrow macrophage_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-39-5037-01A-01R-1443-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-128 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 phosphatidic acid biosynthetic process GO Biological Process Annotations 2015 1.0 null RI-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.01341 TG(18:0/18:0/18:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TFAP2C ENCODE Transcription Factor Targets 1.0 null Urinary Bladder Diseases CTD Gene-Disease Associations 1.0 1.03678 KE39 CCLE Cell Line Gene CNV Profiles 1.0 1.96166 cdp-diacylglycerol metabolic process GO Biological Process Annotations 2015 1.0 null hsa-miR-137 TargetScan Predicted Conserved microRNA Targets 1.0 0.336728 H3K4me3_retinal pigment epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null EBC1 CCLE Cell Line Gene Expression Profiles 1.0 1.35508 CEBPB_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV1-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Rectum adenocarcinoma_READ_TCGA-AF-2689-11A-01R-A32Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cytoplasmic part LOCATE Predicted Protein Localization Annotations 1.0 null intermediate stratum of r10Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.42614 POLR2A_heart_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XYKS-0008-SM-4BRW6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.18883 superficial stratum of r9Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.5261 GTEX-S3XE-0008-SM-3NM8O GTEx Tissue Sample Gene Expression Profiles -1.0 -0.924493 r9 part of spinal vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04643 primary motor cortex (area M1, area 4)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.47898 GTEX-WRHK-1726-SM-3MJFK GTEx Tissue Sample Gene Expression Profiles -1.0 -0.860106 YY1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null fibroblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.082591 Perturb_16535_KO_Repin1_SRP108279 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 19.0 CTCF_GM12869_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Retrosplenial area, ventral part, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09301 CAL-148 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.939934 GTEX-S4P3-0226-SM-3K2BD GTEx Tissue Sample Gene Expression Profiles 1.0 1.62782 H3K9ac_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_CD8 Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null paclitaxel_homo sapiens_gpl570_gse11550 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null TG(20:4(5Z,8Z,11Z,14Z)/16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-58-A46K-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:1(9Z)/16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null U266B1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.49919 LMO2-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null IZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.967529 GTEX-Q2AG-0011-R4A-SM-2HMKA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36257 parataenial nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.837232 GTEX-WVLH-0011-R5A-SM-3MJFW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39219 H3K4me2_H1 BMP4 Derived Mesendoderm Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(16:1(9Z)/18:0/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-92-7341-01A-31R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K4me1_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Ventral posterolateral nucleus of the thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28825 TG(22:5(7Z,10Z,13Z,16Z,19Z)/18:2(9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H2AFZ_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_8825_KD_KCNN4_SRP313537 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 GTEX-X261-0011-R5A-SM-3NMB4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30074 GTEX-QV44-0826-SM-2S1RG GTEx Tissue Sample Gene Expression Profiles 1.0 1.2385 GTEX-WYVS-0326-SM-3NM9V GTEx Tissue Sample Gene Expression Profiles 1.0 1.06922 TG(16:0/16:1(9Z)/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null smallintestine_4d HPA Tissue Sample Gene Expression Profiles 1.0 1.02157 MHH-NB-11 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.3998 H3K4me1_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_Pancreatic Islets Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Memory Disorders CTD Gene-Disease Associations 1.0 1.60524 GTEX-TML8-0001-SM-3NMAF GTEx Tissue Sample Gene Expression Profiles -1.0 -1.79194 SRF ChEA Transcription Factor Targets 1.0 null subcallosal cingulate gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.01417 r5 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31646 Adult_Liver Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.08093 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10W-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AP-2rep MotifMap Predicted Transcription Factor Targets 1.0 null GTEX-S341-0226-SM-2XCAX GTEx Tissue Sample Gene Expression Profiles 1.0 1.0496 coccidiosis DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.53833 STAT3_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null GTEX-XPT6-0006-SM-4B66Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.0351 neutral lipid biosynthetic process GO Biological Process Annotations 2015 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5894-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-VJWN-0426-SM-3GIJI GTEx Tissue Sample Gene Expression Profiles 1.0 1.35787 TG(18:2(9Z,12Z)/20:0/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null DMRT1 ChEA Transcription Factor Targets 1.0 null SJRH30 CCLE Cell Line Gene CNV Profiles 1.0 1.91658 GATA1 ChEA Transcription Factor Targets 1.0 null ursodeoxycholic acid_mus musculus_gpl6246_gse22608 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.079309 LMO2 ChEA Transcription Factor Targets 1.0 null GTEX-X15G-0526-SM-3NMB7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.868698 ctnnb1_19652203_myeloma_lof_human_gpl570_gds3578 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.252204 ChIP_RNF2_22325148 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-77-6845-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_15628_KO_Mbnl1/Mbnl2_SRP103934 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.95304 E2F4 ENCODE Transcription Factor Targets 1.0 null A-CA-04-2009(H1N1)_36Hour_None_GSE37571 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.265 Kidney renal clear cell carcinoma_KIRC_TCGA-CW-6090-11A-01R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abnormality of the genitourinary system GWASdb SNP-Phenotype Associations 1.0 0.053308 CA3 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.83446 Dorsal peduncular area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12656 mRNA_RXRA_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null TG(16:0/18:2(9Z,12Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null COR-L32 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me2_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CX-7086-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAUZ-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hel HPA Cell Line Gene Expression Profiles -1.0 -2.39936 periventricular stratum of Hb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19454 GTEX-WVLH-0626-SM-3MJG7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.6631 FOSL2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAZ_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_Penis Foreskin Fibroblast Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null superficial stratum of r1Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14475 Pain CTD Gene-Disease Associations 1.0 1.82673 21205295-TableS1 GeneSigDB Published Gene Signatures 1.0 null tissues, cell types and enzyme sources TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.783972 Nephritis, Interstitial CTD Gene-Disease Associations 1.0 1.3231 H3K4me3_mammary epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-WEY5-0001-SM-3P61Z GTEx Tissue Sample Gene Expression Profiles -1.0 -1.04725 H3K9ac_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_6330_KO_Lonp1_SRP304502 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 3.94351 r5 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.53341 phosphorylation GeneRIF Biological Term Annotations 1.0 null PGC-1alpha_Deficiency_GDS4904_311_mouse_Aged gastrocnemius muscle - 24 months GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/16:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null superficial stratum of the IG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04233 Prostate adenocarcinoma_PRAD_TCGA-EJ-5514-01A-01R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_10860_KO_Med13_SRP302233 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 10.903 WHSC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7633-01A-11R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-P44H-0426-SM-2XCEZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.26675 Acute Myeloid Leukemia_LAML_TCGA-AB-2988-03B-01T-0748-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_BE2C_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null organic substance biosynthetic process GO Biological Process Annotations 2015 1.0 null blood TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.325335 HS 852.T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.989529 MAZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PX3G-0006-SM-33HBQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.985517 GTEX-S7SF-0001-SM-3K2BE GTEx Tissue Sample Gene Expression Profiles -1.0 -0.972706 18787218-tableS1 GeneSigDB Published Gene Signatures 1.0 null FOSL1_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-68-A59J-01A-21R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SIN3A_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_cardiac mesoderm_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_1701_OE_CLK3_SRP128920 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 14.0593 organelle membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 TG(16:1(9Z)/18:1(9Z)/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Metabolism Reactome Pathways 2014 1.0 null H3K4me1_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S7SE-0011-R6A-SM-2XCD9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07736 TG(16:1(9Z)/16:1(9Z)/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K27ac_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null male reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Seizures CTD Gene-Disease Associations 1.0 1.30117 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Cardiovascular Diseases CTD Gene-Disease Associations 1.0 1.5678 EN1 JASPAR Predicted Transcription Factor Targets 1.0 null Gustatory areas, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.06825 H3K4me1_iPS DF 6.9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-VUSG-0726-SM-3GIK1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.01446 Orbital area, medial part, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.82563 Adrenocortical carcinoma_ACC_TCGA-OR-A5LH-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null USF2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/18:1(9Z)/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null CHL-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null Carcinoma, Hepatocellular CTD Gene-Disease Associations 1.0 1.96388 Craniofacial Abnormalities CTD Gene-Disease Associations 1.0 1.41559 GTEX-WRHK-0826-SM-3MJFG GTEx Tissue Sample Gene Expression Profiles 1.0 0.88172 Perturb_2831_KO_CEBPB_ERP133601 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.44107 medial mammillary nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.14992 medial vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.52338 TG(18:0/18:1(9Z)/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null urinary tract TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 Ventral posteromedial nucleus of the thalamus, parvicellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02043 Palmityl-CoA HMDB Metabolites of Enzymes 1.0 null Perturb_7070_KO_Lmna_SRP173589 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -11.0094 E2F6_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null E2F6 ENCODE Transcription Factor Targets 1.0 null implicated GeneRIF Biological Term Annotations 1.0 null GTEX-POMQ-0006-SM-33HBY GTEx Tissue Sample Gene Expression Profiles 1.0 0.902931 GTF2F1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Fundus of striatum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18414 TG(18:2(9Z,12Z)/16:0/20:5(5Z,8Z,11Z,14Z,17Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me2_Muscle Satellite Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-T5JW-1226-SM-3GACY GTEx Tissue Sample Gene Expression Profiles 1.0 1.00769 intracellular organelle LOCATE Predicted Protein Localization Annotations 1.0 null MDA-MB-361 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.947241 CTBP2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null monogenic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.043739 ZNF143_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDK8_knockdown_163_GSE38061 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 0.970008 prostate_4a HPA Tissue Sample Gene Expression Profiles -1.0 -0.851059 GTEX-XXEK-0008-SM-4BRW7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22048 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6010-01A-11R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Proteinuria CTD Gene-Disease Associations 1.0 1.60827 BFTC-905 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.25951 GTEX-SIU7-0006-SM-2XCE6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.994181 POLR2A_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null Myocardial Ischemia CTD Gene-Disease Associations 1.0 1.13109 TG(18:1(9Z)/18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K9ac_Duodenum Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null COLO 320DM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.50708 Perturb_7116_OE_Sirt5_SRP364867 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.8998 neutral lipid metabolic process GO Biological Process Annotations 2015 1.0 null H3K9ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MAZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KDM4C_natural variation_GSE41040_590_human_fibroblasts fron neonatal foreskin GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null KLF4_01_339 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.59372 Neoplasm Metastasis CTD Gene-Disease Associations 1.0 1.49609 SK-MES-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.83537 mapped GeneRIF Biological Term Annotations 1.0 null GTEX-OXRL-1826-SM-2YUMV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.937738 GTEX-QEG4-0626-SM-2S1OY GTEx Tissue Sample Gene Expression Profiles 1.0 0.890792 H3K4me3_GM12865_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Perturb_3567_KD_CA2_SRP336886 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 8.77795 ELK1 ChEA Transcription Factor Targets 1.0 null H3K4me1_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_HepG2_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null miR-124_OE_GDS2657_770_human_HepG2 cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null POLR2AphosphoS5_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9ac_Colonic Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null monocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.219707 (2E)-Hexadecenoyl-CoA HMDB Metabolites of Enzymes 1.0 null CREM ChEA Transcription Factor Targets 1.0 null GTEX-XMD1-0011-R3B-SM-4AT5R GTEx Tissue Sample Gene Expression Profiles -1.0 -0.91368 H3K4me3_WI38_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null TG(18:1(9Z)/18:2(9Z,12Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null abducens nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.38681 primary auditory cortex (core)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.55581 TG(16:1(9Z)/16:1(9Z)/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null TBP ENCODE Transcription Factor Targets 1.0 null JEKO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.25776 TG(16:0/18:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null medial subhabenular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.20143 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:3(9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null hsa-miR-1229 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 neoplasm GWASdb SNP-Phenotype Associations 1.0 0.043802 NCI-H2135 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.35399 CTCF_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:2(9Z,12Z)/18:2(9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K27ac_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MAFK_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H2AFZ_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null male reproductive organ cancer GWASdb SNP-Disease Associations 1.0 0.34435 Perturb_13133_KO_Pnpt1_SRP134850 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 10.3042 endoplasmic reticulum COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 H3K4me2_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-U412-0326-SM-3DB9L GTEx Tissue Sample Gene Expression Profiles 1.0 1.53988 Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZS-06A-12R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/22:5(7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-T6MN-0626-SM-32PM9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.23327 viral infectious disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.056344 H3K4me3_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null phenotypic abnormality GWASdb SNP-Phenotype Associations 1.0 0.032445 GTEX-XQ8I-1926-SM-4BOOK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.61243 intracellular part LOCATE Curated Protein Localization Annotations 1.0 null hematopoietic stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.145867 amygdalohippocampal transition zone, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.1476 Hemolysis CTD Gene-Disease Associations 1.0 1.58842 NCIH1373 CCLE Cell Line Gene CNV Profiles 1.0 2.16206 H3K27ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-V1D1-0926-SM-4JBHQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.945889 mediodorsal nucleus of thalamus_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.24769 SNU-423 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 H3K9ac_Rectal Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null hsa-miR-588 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 STAT4 MotifMap Predicted Transcription Factor Targets 1.0 null intracellular membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null CD40LG Hub Proteins Protein-Protein Interactions 1.0 null spinal (inferior) vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.957918 HCC366 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.28685 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A110-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null A2780 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.01483 ChIP_MTF2_20144788 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null TCF12_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Panc1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null PE01 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.23256 Neutropenia CTD Gene-Disease Associations 1.0 1.03901 H2AFZ_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cellular metabolic process GO Biological Process Annotations 2015 1.0 null H3K4me3_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of r2BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13172 H2AFZ_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null (2E)-Tetradecenoyl-CoA HMDB Metabolites of Enzymes 1.0 null brain_3b HPA Tissue Sample Gene Expression Profiles -1.0 -1.67966 H3K4me1_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null hsa-let-7b TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 BJAB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.17022 SNU-1040 COSMIC Cell Line Gene Mutation Profiles 1.0 null MAFK_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ventral reuniens nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.97171 Liver Neoplasms, Experimental CTD Gene-Disease Associations 1.0 2.08835 H3K4me3_epithelial cell of proximal tubule_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null NCI-H1623 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.1783 H3K27me3_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GATA2-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null LPA(18:0e/0:0) HMDB Metabolites of Enzymes 1.0 null Perturb_4614_KD_Etv5_SRP231452 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.26163 SETDB1 ENCODE Transcription Factor Targets 1.0 null hsa-let-7c TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 Prelimbic area, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13534 Perturb_2125_KO_AMBRA1_SRP288295 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 9.70779 PK45H CCLE Cell Line Gene CNV Profiles -1.0 -1.5566 GTEX-X4XX-0011-R2A-SM-3P623 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25545 organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 LC1F CCLE Cell Line Gene Expression Profiles 1.0 1.3756 FOSL1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Synthesis of PA Reactome Pathways 2014 1.0 null H3K4me3_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mRNA_ASCL1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null H3K4me3_NB4_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-8107-01A-13R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_WI38_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null kidney_d HPA Tissue Sample Gene Expression Profiles 1.0 2.74889 SYNCRIP_02_10 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.5927 phospholipid biosynthetic process GO Biological Process Annotations 2015 1.0 null bradyzoite TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 2.17343 peritoneal macrophage TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.32205 Sarcoma_SARC_TCGA-DX-A3UB-01A-11R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Vomiting CTD Gene-Disease Associations 1.0 1.48633 19605494-TableS3 GeneSigDB Published Gene Signatures 1.0 null HCC1493 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.41998 posteroventral (inferior) parietal cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.866592 TG(16:0/14:0/18:0)[iso6] HMDB Metabolites of Enzymes 1.0 null lung cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.257907 Perturb_7085_KO_Mrtfa/Mrtfb_SRP059315 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.94945 inner SZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.01951 H3K4me3_Rectal Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-PWCY-1026-SM-48TD4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.04985 GTEX-N7MT-0011-R7a-SM-2I3FZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03102 HCC366 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.32316 sevoflurane_homo sapiens_gpl570_gds2772 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Kidney Chromophobe_KICH_TCGA-KN-8419-11A-01R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH1373 CCLE Cell Line Gene Expression Profiles 1.0 1.79916 disease of mental health GWASdb SNP-Disease Associations 1.0 0.052672 KDM1A ENCODE Transcription Factor Targets 1.0 null NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.00167 Perturb_14562_KD_SULF2_SRP361678 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 SG in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.846028 pancreas_6b HPA Tissue Sample Gene Expression Profiles -1.0 -0.95981 periventricular nucleus, preoptic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.952648 H3K4me3_fibroblast of pedal digit skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-UPK5-0226-SM-3GAEV GTEx Tissue Sample Gene Expression Profiles 1.0 1.21073 H3K27me3_erythroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.5503 COV413B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.00253 induseum griseum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04328 H3K4me2_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_15133_OE_Klf10_SRP360603 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 H3K4me3_Fetal Brain Roadmap Epigenomics Histone Modification Site Profiles 1.0 null cellular_component COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 integral component of membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 mediodorsal nucleus of thalamus_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.17279 Brain Lower Grade Glioma_LGG_TCGA-DU-7012-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-WWYW-0011-R6A-SM-3NB3G GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05457 Perturb_4643_KO_Wwc2_SRP151543 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 4.03578 metabolic process GO Biological Process Annotations 2015 1.0 null Perturb_13895_KD_BRCA1_SRP135799 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 5.27431 outer SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.934032 GTEX-S4Q7-1526-SM-3K2AG GTEx Tissue Sample Gene Expression Profiles 1.0 1.72942 H3K4me2_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cell COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 RUNX1 ChEA Transcription Factor Targets 1.0 null trochlear nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.25016 interstitial nucleus of Cajal, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.52768 Entorhinal area, lateral part, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76323 Nervous System Diseases CTD Gene-Disease Associations 1.0 1.83042 GTEX-XMK1-1126-SM-4IHJ8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.855776 abnormality of the prostate GWASdb SNP-Phenotype Associations 1.0 0.486163 H3K4me1_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K27ac_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null U266B1 CCLE Cell Line Gene CNV Profiles -1.0 -1.94901 (2E)-Decenoyl-CoA HMDB Metabolites of Enzymes 1.0 null GTEX-OIZG-0426-SM-3LK5W GTEx Tissue Sample Gene Expression Profiles -1.0 -0.881661 LPA(0:0/18:1(9Z)) HMDB Metabolites of Enzymes 1.0 null ES7 COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-PSDG-0726-SM-2I5FN GTEx Tissue Sample Gene Expression Profiles 1.0 1.22805 CAPAN-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.36954 Perturb_6613_KD_ATF2WT_SRP072851 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 blastocysts BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.22899 ZNF263_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_CD34 Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SUPHD1 CCLE Cell Line Gene CNV Profiles -1.0 -1.63492 NCIH2066 CCLE Cell Line Gene CNV Profiles 1.0 1.89356 Heptanoyl-CoA HMDB Metabolites of Enzymes 1.0 null intracellular organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 TG(18:2(9Z,12Z)/18:1(9Z)/20:2(11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null importance GeneRIF Biological Term Annotations 1.0 null abnormality of the genital system GWASdb SNP-Phenotype Associations 1.0 0.083746 H3K4me1_ES-E14_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null COR-L279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.894387 Lung squamous cell carcinoma_LUSC_TCGA-98-A53A-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RBBP5_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null OLIG2 ChEA Transcription Factor Targets 1.0 null primary motor cortex (area M1, area 4)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.7037 ACADM_KO_GDS4546_512_mouse_liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null TG(16:0/16:0/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null CHD2_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver Cirrhosis, Experimental CTD Gene-Disease Associations 1.0 1.58184 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7418-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-SNOS-0226-SM-32PLR GTEx Tissue Sample Gene Expression Profiles 1.0 1.08784 HDAC2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMAD3 ChEA Transcription Factor Targets 1.0 null H3K4me1_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null HMGN3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null indusium griseum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.30576 H3K4me3_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null organelle part GO Cellular Component Annotations 2015 1.0 null mantle zone of ERCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.72234 TG(16:0/16:0/18:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null layer 5 of CCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0519 CBX3 ENCODE Transcription Factor Targets 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null YAP1-20516196-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null TG(18:1(9Z)/16:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null rnf2_20805357_u2os_osteosarcoma_lof_human_gpl570_gse23035 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.618112 soft tissue HPA Tissue Protein Expression Profiles -1.0 -1.14713 Myocardial Infarction CTD Gene-Disease Associations 1.0 1.49635 GTEX-U3ZM-0126-SM-3DB8M GTEx Tissue Sample Gene Expression Profiles 1.0 1.02612 intercalated nucleus of medulla Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.947684 Non-alcoholic Fatty Liver Disease CTD Gene-Disease Associations 1.0 1.15022 MZ7-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null chromosome GeneRIF Biological Term Annotations 1.0 null GTEX-WL46-0126-SM-3TW8I GTEx Tissue Sample Gene Expression Profiles 1.0 0.948222 VZ in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.09877 H3K9ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_BJ_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null PAX5 ENCODE Transcription Factor Targets 1.0 null H3K4me3_bronchial epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Infralimbic area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.91952 Fetal Growth Retardation CTD Gene-Disease Associations 1.0 1.40486 Primary somatosensory area, barrel field, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12421 ZMIZ1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OHPM-0008-SM-4E3IP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.8295 mediodorsal nucleus of thalamus_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 3.4231 GTEX-T6MO-0003-SM-3NMAG GTEx Tissue Sample Gene Expression Profiles -1.0 -2.47793 TE15 CCLE Cell Line Gene CNV Profiles 1.0 1.5493 EZH2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/16:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null EP300 ENCODE Transcription Factor Targets 1.0 null PcPL part of the periaqueductal gray Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.33589 breast carcinoma in situ DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.253127 Copula pyramidis, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.49974 HCC2270 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-50-6592-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF750_KD_GSE38039_696_human_HaCaT keratinocytes GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null inner CP in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.971312 H3K4me1_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_Brain Substantia Nigra Roadmap Epigenomics Histone Modification Site Profiles 1.0 null female reproductive gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.230931 EZH2_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null paraventricular nucleus, cap part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.33002 hsa-miR-4531 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 mantle zone of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13533 layer 2 of ERCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.02062 H3K4me1_Muscle Satellite Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-U8T8-1226-SM-4E3IH GTEx Tissue Sample Gene Expression Profiles 1.0 0.905121 intracellular COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.470005 PBX3 ENCODE Transcription Factor Targets 1.0 null Perturb_3256_KD_EED_SRP044056 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 posteroventral (inferior) parietal cortex_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.64922 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5982-11A-01R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ARID3A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_mammary epithelial cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/16:0/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K27me3_erythroblast_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null COV413A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05031 CHD2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_LNCaP clone FGC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ENG Hub Proteins Protein-Protein Interactions 1.0 null hsa-miR-23a TargetScan Predicted Conserved microRNA Targets 1.0 0.766596 vomeralnasalorgan.VMO. BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.07473 GTEX-WFG7-0005-SM-3GIKM GTEx Tissue Sample Gene Expression Profiles 1.0 1.1564 ZNF750_KD_GDS4599_177_human_HaCaT keratinocytes GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-OOBJ-0006-SM-2I3F4 GTEx Tissue Sample Gene Expression Profiles 1.0 0.885717 EP300_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF12_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_cardiac mesoderm_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMAD4-21741376-HESC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null Ventral tegmental nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.14522 ATF3_02_54 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.61235 VCAP CCLE Cell Line Gene CNV Profiles 1.0 1.3587 EBF1_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RM2N-0006-SM-2TF5H GTEx Tissue Sample Gene Expression Profiles 1.0 1.7511 TEAD4_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Mesothelioma_MESO_TCGA-LK-A4O4-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FXR MotifMap Predicted Transcription Factor Targets 1.0 null TG(18:1(9Z)/18:1(9Z)/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-S7SE-0011-R4A-SM-2XCDB GTEx Tissue Sample Gene Expression Profiles -1.0 -2.63863 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:3(9Z,12Z,15Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] HMDB Metabolites of Enzymes 1.0 null intracellular membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null TG(16:1(9Z)/16:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(16:0/18:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me1_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/14:0/16:0)[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-UPIC-0226-SM-3GADO GTEx Tissue Sample Gene Expression Profiles 1.0 1.48629 Headache CTD Gene-Disease Associations 1.0 1.59381 Gustatory areas Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.5598 carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.059072 H3K4me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCC1493 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.60571 COLO 678 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.81109 GTEX-RN64-0326-SM-2TC5J GTEx Tissue Sample Gene Expression Profiles 1.0 1.02551 USF2 ENCODE Transcription Factor Targets 1.0 null intermediate stratum of TSPaA Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.23074 cerebellum_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.882801 Acute Myeloid Leukemia_LAML_TCGA-AB-2889-03A-01T-0735-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_1343_OE_GPD1_SRP405996 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Perturb_16963_OE_RAB44_SRP305964 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.55058 Perturb_1783_KO_Msi2_SRP201799 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.78916 Perturb_4265_KD_CHD7_SRP160423 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.98541 Perturb_17334_OE_NANOS3_SRP216951 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 Perturb_12060_KO|KO_Stat5a|Stat5b_SRP012574 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 16.5345 SIN3A ENCODE Transcription Factor Targets 1.0 null abnormality of the nervous system GWASdb SNP-Phenotype Associations 1.0 0.047687 Perturb_7806_KD_WRAP53_SRP070122 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 3.19591 GTEX-VUSH-0004-SM-3P61T GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48921 endoplasmic reticulum membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 Perturb_15238_KD_TINCR_SRP082178 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 4.65938 H3K4me3_fibroblast of villous mesenchyme_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OHPN-0008-SM-4E3HW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28672 MAFA MotifMap Predicted Transcription Factor Targets 1.0 null KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.06039 Perturb_15681_KD_NR2F2_ERP124128 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -3.76185 GTEX-PLZ5-0326-SM-3P614 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.924394 Neuro D MotifMap Predicted Transcription Factor Targets 1.0 null basolateral nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.21874 Disease Models, Animal CTD Gene-Disease Associations 1.0 1.82185 H3K4me3_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(18:1(11Z)/16:1(9Z)/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null DMS-79 COSMIC Cell Line Gene Mutation Profiles 1.0 null LPA(18:0/0:0) HMDB Metabolites of Enzymes 1.0 null Perturb_6025_KD_KAP1_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 8.70908 TG(15:0/18:1(9Z)/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(18:2(9Z,12Z)/18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K27ac_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TG(20:0/20:0/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-S7SE-0011-R5A-SM-2XCDA GTEx Tissue Sample Gene Expression Profiles -1.0 -0.976576 15273739-Table2 GeneSigDB Published Gene Signatures 1.0 null TG(18:2(9Z,12Z)/18:1(9Z)/22:4(7Z,10Z,13Z,16Z))[iso6] HMDB Metabolites of Enzymes 1.0 null dentate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.47009 hsa-miR-199b-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 hematopoietic cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.28107 Perturb_12579_KD_SMO_SRP254554 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 H3K4me3_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null nanog_16518401_mesc_lof_mouse_gpl1261_gds1824 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.135776 TG(16:1(9Z)/16:1(9Z)/18:0)[iso3] HMDB Metabolites of Enzymes 1.0 null JUND_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_14644_KO_PC_SRP388542 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 9.13957 hsa-miR-134 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 SNU-387 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 Neurobehavioral Manifestations CTD Gene-Disease Associations 1.0 1.89829 MG-63 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.98512 H3K4me1_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null blood cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.063888 H3K27ac_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null KMS-21BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.833045 59M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.21644 anteroventral nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01135 ZBTB33_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TNIK_knockdown_297_GSE17623 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.90695 GATA3 ENCODE Transcription Factor Targets 1.0 null posterior (caudal) superior temporal cortex (area 22c)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.80526 TG(18:3(9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_Panc1_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NPJ7-0008-SM-4E3JS GTEx Tissue Sample Gene Expression Profiles -1.0 -0.843302 H3K4me3_H1 BMP4 Derived Trophoblast Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null NCIH2073 CCLE Cell Line Gene CNV Profiles -1.0 -2.19275 organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 thoracic cancer GWASdb SNP-Disease Associations 1.0 0.414722 H2AFZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Microcephaly CTD Gene-Disease Associations 1.0 1.10211 parasitic protozoa infectious disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.01427 brain disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.048572 REST ENCODE Transcription Factor Targets 1.0 null mantle zone of JcPL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00993 Perturb_7991_KO_Dnmt3a_ERP107945 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 8.43966 JUND_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_2138_KO_ASCC3_SRP282634 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 H3K4me3_fibroblast of villous mesenchyme_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P4QT-2426-SM-3NMCL GTEx Tissue Sample Gene Expression Profiles 1.0 1.50697 GTEX-PWO3-0011-R1A-SM-2I5EW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00159 H3K4me3_fibroblast of gingiva_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_HepG2_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null immune system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.043153 TG(18:1(9Z)/18:1(9Z)/22:4(7Z,10Z,13Z,16Z))[iso3] HMDB Metabolites of Enzymes 1.0 null biosynthesis GeneRIF Biological Term Annotations 1.0 null C32 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.963306 GTEX-WFG7-2226-SM-3GIKP GTEx Tissue Sample Gene Expression Profiles 1.0 0.973578 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A1Q6-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CA1 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.16021 GTEX-S7SF-0526-SM-3K2BC GTEx Tissue Sample Gene Expression Profiles 1.0 0.93269 Adrenocortical carcinoma_ACC_TCGA-OR-A5LL-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LP-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.02916 CAL27 CCLE Cell Line Gene CNV Profiles -1.0 -1.50001 H3K9ac_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MDA-MB-231 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.00935 GTEX-RVPV-1226-SM-2TF73 GTEx Tissue Sample Gene Expression Profiles 1.0 1.33697 CCNT2 ENCODE Transcription Factor Targets 1.0 null H3K27me3_CH12.LX_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RWS6-2326-SM-2XCB4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.990056 SKLU1 CCLE Cell Line Gene CNV Profiles 1.0 3.2803 GTEX-U3ZM-0008-SM-4DXTQ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.79522 GTEX-RU72-1326-SM-2TF6T GTEx Tissue Sample Gene Expression Profiles 1.0 0.85026 GTEX-XBED-0226-SM-47JY8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.29091 cellular lipid metabolic process GO Biological Process Annotations 2015 1.0 null Congenital Abnormalities CTD Gene-Disease Associations 1.0 1.15627 Bladder Urothelial Carcinoma_BLCA_TCGA-FT-A61P-01A-11R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K9me3_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null intracellular part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 periventricular stratum of PcPL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.33443 H3K4me3_GM12864_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TET2_KO_GDS4287_429_mouse_LSK - bone marrow progenitor population GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null TG(18:2(9Z,12Z)/14:0/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(16:1(9Z)/18:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-21-1072-01A-01R-0692-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_fibroblast of foreskin _hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_HL-60_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null OC-314 COSMIC Cell Line Gene Mutation Profiles 1.0 null Bronchitis CTD Gene-Disease Associations 1.0 1.01025 intracellular organelle part GO Cellular Component Annotations 2015 1.0 null CTCF_keratinocyte_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF263_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S33H-0008-SM-4AD6C GTEx Tissue Sample Gene Expression Profiles -1.0 -0.839936 TG(15:0/18:2(9Z,12Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null r2 part of ventral lateral lemniscal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13172 MITF ChEA Transcription Factor Targets 1.0 null JURKAT, CLONE E6-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null TG(18:2(9Z,12Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null RBBP5 ENCODE Transcription Factor Targets 1.0 null hsa-miR-3118 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 Perturb_6879_KD_LINC00857_SRP371132 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 4.60839 GABPA_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-P4QT-0008-SM-48TDZ GTEx Tissue Sample Gene Expression Profiles -1.0 -0.850472 intracellular non-membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.052057 RPMI 2650 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.94903 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A901-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null urinary system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.236921 Infertility, Female CTD Gene-Disease Associations 1.0 1.34111 regulation of response to stimulus GO Biological Process Annotations 2015 1.0 null H3K27me3_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null red nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.42255 TG(18:1(11Z)/16:1(9Z)/18:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Rectum adenocarcinoma_READ_TCGA-AF-5654-11A-11R-1660-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso6] HMDB Metabolites of Enzymes 1.0 null NCI-H187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.69959 TG(16:1(9Z)/16:0/18:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null 17616640-TableS1 GeneSigDB Published Gene Signatures 1.0 null H3K9ac_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.934122 H3K4me1_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of the aortic adventitia_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-DZ-6131-11A-01R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3ac_C2C12_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SKM-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.871168 HDAC2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null adrenal_4d HPA Tissue Sample Gene Expression Profiles -1.0 -0.975138 TCF7L2_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_GM12866_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null AKT2_knockout_221_GSE19079 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.4458 Lung adenocarcinoma_LUAD_TCGA-38-4631-01A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:1(11Z)/14:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null all GWASdb SNP-Phenotype Associations 1.0 0.032381 GTEX-N7MT-0011-R5a-SM-2I3G6 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.928385 RFX5 ENCODE Transcription Factor Targets 1.0 null eGFP-JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMARCC1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 18450603-Table3S GeneSigDB Published Gene Signatures 1.0 null KAT2B_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF3_01_116 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 1.97299 Brain Lower Grade Glioma_LGG_TCGA-HT-7882-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-TKQ2-0226-SM-4DM6V GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30123 smallintestine BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 2.09859 Drug-Induced Liver Injury CTD Gene-Disease Associations 1.0 2.51418 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null regulation of biological process GO Biological Process Annotations 2015 1.0 null MYC_OE_GDS4763_332_human_MCF10A - immortalized breast epithelial cell line GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-XLM4-0008-SM-4AT4W GTEx Tissue Sample Gene Expression Profiles -1.0 -1.66655 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7248-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H2AFZ ENCODE Transcription Factor Targets 1.0 null NCI-H1573 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.50752 Perturb_3772_KD_BEGAIN_SRP041162 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 p2 portion of the substantia nigra pars reticulata Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30316 SK-MES-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.08104 GTEX-NPJ8-0011-R5a-SM-2HMJY GTEx Tissue Sample Gene Expression Profiles -1.0 -0.838125 SK-MM-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.831371 body of caudate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.14469 HDAC2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null thyroid GTEx Tissue Gene Expression Profiles 1.0 1.10348 H3K4me3_Stomach Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ChIP_EZH2_18974828 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Perturb_814_KD_Dnmt3a_SRP119259 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -10.5667 NCI-H716 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.86383 GTEX-OXRO-0011-R9A-SM-3NB1X GTEx Tissue Sample Gene Expression Profiles -1.0 -0.847918 NRL_Deficiency_GDS1693_237_mouse_Photoreceptors cells of retinas at P6 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null H3K4me1_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null Perturb_1351_OE_TRAF4_SRP292631 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 5.58822 GTEX-RUSQ-0226-SM-47JWT GTEx Tissue Sample Gene Expression Profiles -1.0 -0.82621 cell part LOCATE Predicted Protein Localization Annotations 1.0 null dorsal juxtacommissural pretectal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.36541 Nucleus of reunions Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19942 limitans nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.891484 H3K4me1_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null lung cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.357446 H3K4me3_fibroblast of upper leg skin_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null BACH1 ENCODE Transcription Factor Targets 1.0 null cetuximab_homo sapiens_gpl570_gse21483 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Adenocarcinoma CTD Gene-Disease Associations 1.0 1.07732 Nanog_KD_GDS1824_134_mouse_embryonic stem cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null NCI-N87 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.02916 Lung adenocarcinoma_LUAD_TCGA-78-7150-01A-21R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SRY-25088423-EMBRYONIC GONADS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null FOS_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7156-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null abducens nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.82514 H3K4me3_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CHD1_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SIN3A_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:2(9Z,12Z)/20:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null TG(16:0/16:1(9Z)/18:0)[iso6] HMDB Metabolites of Enzymes 1.0 null OPM-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.30487 Perturb_7362_KD_KDM5A_SRP325972 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 H3K9ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5458-11A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mRNA_ASCL2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3328-01A-01R-0864-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_bone marrow_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WH7G-0826-SM-4LVMR GTEx Tissue Sample Gene Expression Profiles -1.0 -1.12271 SMC3_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTNNB1 ChEA Transcription Factor Targets 1.0 null CTCF_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-R55D-1426-SM-48FEN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.868854 EP300_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XV7Q-0326-SM-4BRVM GTEx Tissue Sample Gene Expression Profiles 1.0 0.989507 abnormality of nervous system physiology GWASdb SNP-Phenotype Associations 1.0 0.068916 Growth Disorders CTD Gene-Disease Associations 1.0 1.26886 TG(20:4(5Z,8Z,11Z,14Z)/18:1(9Z)/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null superficial stratum of PO2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56774 Liver hepatocellular carcinoma_LIHC_TCGA-ZS-A9CF-02A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CA3 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.60097 Lung squamous cell carcinoma_LUSC_TCGA-46-6025-01A-11R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null transferase activity, transferring acyl groups other than amino-acyl groups GO Molecular Function Annotations 2015 1.0 null hsa-let-7i TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 periventricular stratum of r1BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.11493 MDA-MB-436 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 H3K9ac_Adult Liver Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_Treg Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-R55D-1826-SM-48FEF GTEx Tissue Sample Gene Expression Profiles 1.0 1.01115 GTEX-REY6-2426-SM-48FF5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.19356 GTEX-XUW1-0126-SM-4BOOQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.08115 EBF1 ENCODE Transcription Factor Targets 1.0 null Peripheral Nervous System Diseases CTD Gene-Disease Associations 1.0 1.23042 GTEX-P44H-0011-R5A-SM-2XCEX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.40641 TG(16:1(9Z)/18:2(9Z,12Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null Perturb_4403_KO_STING1_SRP191307 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 10.2244 GTEX-P4PP-1026-SM-3NM9O GTEx Tissue Sample Gene Expression Profiles -1.0 -1.67242 cuneate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.12674 hematopoietic cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.358919 H3K4me3_fibroblast of mammary gland_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null SAP30 ENCODE Transcription Factor Targets 1.0 null Cell Transformation, Neoplastic CTD Gene-Disease Associations 1.0 2.01608 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/22:4(7Z,10Z,13Z,16Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CW-5589-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-XUW1-1726-SM-4BOOZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24961 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null LOX-1_OE_GDS4262_435_human_HAECT - aortic endothelial cell line - 24 Hours GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5706-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QEL4-1326-SM-447AD GTEx Tissue Sample Gene Expression Profiles -1.0 -2.1187 GTEX-U3ZN-0826-SM-4DXSZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.21461 ELF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null brain_a HPA Tissue Sample Gene Expression Profiles -1.0 -1.83402 Hematuria CTD Gene-Disease Associations 1.0 1.15661 TG(18:1(9Z)/16:0/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-NPJ8-0011-R4a-SM-2HML3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.78737 RARG-19884340-MEF-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me2_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H4K20me1_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2073 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.08852 H3K27me3_H7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Neurosphere Cultured Cells Cortex Derived Roadmap Epigenomics Histone Modification Site Profiles 1.0 null NFKB1 JASPAR Predicted Transcription Factor Targets 1.0 null REST_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_Brain Inferior Temporal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null CTCF_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null heart_5a HPA Tissue Sample Gene Expression Profiles 1.0 0.89278 medial superior olive Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.63411 Perturb_18149_KO_Ikbkb/Shp2_SRP285005 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 HCC2302 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.86383 GTEX-V955-0004-SM-3NMDH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.39168 Kidney Chromophobe_KICH_TCGA-KL-8337-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-603 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 H3K4me1_Brain Substantia Nigra Roadmap Epigenomics Histone Modification Site Profiles 1.0 null FGFR3_KD_GDS4454_79_human_RT112 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null CTCF_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Hypotension CTD Gene-Disease Associations 1.0 1.01625 TG(16:0/18:1(9Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null NCI-H847 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.27237 GTEX-XV7Q-0008-SM-4BRWL GTEx Tissue Sample Gene Expression Profiles -1.0 -2.27098 H3K27ac_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U8XE-0008-SM-4E3K4 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.905763 CTCF_embryonic fibroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me2_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RWSA-0526-SM-2XCBC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.839807 Kidney Chromophobe_KICH_TCGA-KL-8332-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SK-N-SH Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.39055 hippocampus (hippocampal formation)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.20049 TEAD4_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-4451 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 r10 part of spinal vestibular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.4287 SP1_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver Failure, Acute CTD Gene-Disease Associations 1.0 1.22534 TG(16:1(9Z)/18:2(9Z,12Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(16:0/16:0/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(18:0/18:0/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null ARID3A_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null central nucleus of inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.43439 mantle zone of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30765 H3K4me3_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_12030_KD_ADORA1_SRP215261 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 Taenia tecta, dorsal part, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07068 EZH2_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H226 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.868936 lung large cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.5645 POLR2AphosphoS5_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UTHO-1826-SM-3GAFE GTEx Tissue Sample Gene Expression Profiles 1.0 0.886794 TG(18:0/14:0/18:0)[iso3] HMDB Metabolites of Enzymes 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5359-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EZH2 ChEA Transcription Factor Targets 1.0 null Perturb_10866_KO_Hsf1_SRP116890 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 7.74993 Depressive Disorder CTD Gene-Disease Associations 1.0 1.65952 Perturb_6890_KD_E2F1_SRP238361 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 GTEX-X62O-1626-SM-46MW9 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01804 Hexanoyl-CoA HMDB Metabolites of Enzymes 1.0 null cancer GWASdb SNP-Disease Associations 1.0 0.054759 Perturb_9617_KD_LKB1_SRP045048 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 EED-16625203-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null HCC364 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.869849 NCI-H292 COSMIC Cell Line Gene Mutation Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Oligospermia CTD Gene-Disease Associations 1.0 1.1529 acylglycerol o-acyltransferase activity GO Molecular Function Annotations 2015 1.0 null GTEX-PW2O-0226-SM-48TC7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38036 glycerolipid GeneRIF Biological Term Annotations 1.0 null SOCS3_DELETION_GDS1254_80_mouse_ES (embryonic stems cells) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Brain Diseases CTD Gene-Disease Associations 1.0 1.49762 H3K27me3_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cellular GeneRIF Biological Term Annotations 1.0 null KDM5B_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:2(9Z,12Z)/14:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null adipocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.485935 Perturb_11964_KO_BATF_SRP401628 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-5324-01A-01R-1686-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null apical complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.187333 basolateral nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.11661 single-organism metabolic process GO Biological Process Annotations 2015 1.0 null TG(18:2(9Z,12Z)/14:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Lung adenocarcinoma_LUAD_TCGA-50-5072-01A-21R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-V955-0005-SM-3P5ZC GTEx Tissue Sample Gene Expression Profiles 1.0 1.26331 GTEX-XUW1-0008-SM-4BOQH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42167 NCIH28 CCLE Cell Line Gene CNV Profiles -1.0 -1.40095 SAP30_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null organic substance metabolic process GO Biological Process Annotations 2015 1.0 null Brain_Germinal_Matrix Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -1.04136 Propionyl-CoA HMDB Metabolites of Enzymes 1.0 null GTEX-T6MN-0011-R4A-SM-32QPG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.75638 Acute Myeloid Leukemia_LAML_TCGA-AB-2929-03A-01T-0735-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null prostate neoplasm GWASdb SNP-Phenotype Associations 1.0 0.486163 Perturb_9653_KD_HAND1_SRP306591 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 GTEX-S3XE-0526-SM-4AD4G GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20842 motor nucleus of trigeminal nerve Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.97073 POLR2A_embryonic fibroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SKNO1 CCLE Cell Line Gene CNV Profiles 1.0 1.64029 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5878-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OPM2 CCLE Cell Line Gene CNV Profiles 1.0 1.37209 YY1 MotifMap Predicted Transcription Factor Targets 1.0 null TG(18:3(9Z,12Z,15Z)/14:0/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Movement Disorders CTD Gene-Disease Associations 1.0 1.35299 TG(18:3(9Z,12Z,15Z)/14:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null primary motor cortex (area M1, area 4)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.16991 JUN_K562_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Field CA2, pyramidal layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28775 chorioretinitis DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.752492 phagocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.166034 TG(18:0/18:0/18:0) HMDB Metabolites of Enzymes 1.0 null PK-45P Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.992941 Lung squamous cell carcinoma_LUSC_TCGA-18-3411-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_6369_KD_HAND1_SRP264999 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 10.3757 TAF1_PFSK-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null intermediate stratum of m2Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06812 magnocellular division of VA Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.982796 MYC_NB4_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null wehi-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.1483 Nucleus of the lateral lemniscus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14663 foxa1_21151129_mcfdash7_lof_human_gpl10558_gse25315 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.421084 ZFP281-18757296-E14-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] HMDB Metabolites of Enzymes 1.0 null placenta_6c HPA Tissue Sample Gene Expression Profiles -1.0 -1.04503 eye disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.043342 GTEX-NPJ8-0011-R7a-SM-2HMJV GTEx Tissue Sample Gene Expression Profiles -1.0 -0.921323 SMARCB1 ENCODE Transcription Factor Targets 1.0 null Perturb_12538_KO_FBXO11_SRP278534 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 layer 4 of PaS Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35277 TBP_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Thromboembolism CTD Gene-Disease Associations 1.0 1.09751 POLR2AphosphoS5_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null OAW42 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25384 o-acyltransferase activity GO Molecular Function Annotations 2015 1.0 null TG(16:1(9Z)/18:0/18:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null CDP-diacylglycerol biosynthesis HumanCyc Pathways 1.0 null amygdalohippocampal transition zone, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07776 RT11284 CCLE Cell Line Gene CNV Profiles -1.0 -1.37955 EZH2_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:0/20:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null embryonic cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.092174 PANC 02.03 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.17214 TG(18:1(9Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-SUCS-0006-SM-4DM59 GTEx Tissue Sample Gene Expression Profiles 1.0 0.996181 TG(20:0/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null r10 part of the vestibular column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.17355 primary visual cortex (striate cortex, area V1/17)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.1322 H3K4me3_choroid plexus epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null ChIP_RNF2_16625203 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null COR-L23 COSMIC Cell Line Gene Mutation Profiles 1.0 null RNF2 ENCODE Transcription Factor Targets 1.0 null HNF4A-19822575-HepG2-human ChEA Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7254-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cerebellar cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.07875 NCI-H460 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.00234 H3K9ac_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null DOK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null Brain Edema CTD Gene-Disease Associations 1.0 1.11325 Respiratory Hypersensitivity CTD Gene-Disease Associations 1.0 1.04465 GTEX-XMD1-0011-R6A-SM-4AT5K GTEx Tissue Sample Gene Expression Profiles -1.0 -1.03967 TG(18:3(9Z,12Z,15Z)/18:3(9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-S7SE-0011-R7A-SM-2XCDI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11674 TEAD4_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-PWCY-1326-SM-48TCU GTEx Tissue Sample Gene Expression Profiles 1.0 1.94155 Nonanoyl-CoA HMDB Metabolites of Enzymes 1.0 null H3K4me2_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H2AFZ_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null triglyceride metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-OIZG-0008-SM-4E3J2 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.40969 Perturb_13728_KD_KRAS_SRP116072 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 cuneate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06033 GTEX-RU1J-0826-SM-46MUU GTEx Tissue Sample Gene Expression Profiles 1.0 1.52317 KMS-28BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.869849 TG(18:2(9Z,12Z)/16:0/20:2(11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me1_Stomach Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null cerebellar cortex_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.861178 POLR2A_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7059-11A-01R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Ataxia CTD Gene-Disease Associations 1.0 1.27689 abducens nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.63615 posteromedial visual area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29665 GABPA_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TET2_KO_GDS4287_430_mouse_CMP - bone marrow progenitor population GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null 20937356-TableS2 GeneSigDB Published Gene Signatures 1.0 null fat_a.V1 HPA Tissue Sample Gene Expression Profiles 1.0 1.0478 GTEX-XXEK-1026-SM-4BRUW GTEx Tissue Sample Gene Expression Profiles 1.0 0.832462 GTEX-SNMC-0006-SM-2XCFE GTEx Tissue Sample Gene Expression Profiles 1.0 2.02463 MITF-21258399-MELANOMA-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null kidney_a HPA Tissue Sample Gene Expression Profiles 1.0 1.52119 Anterolateral visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16982 Sarcoma_SARC_TCGA-DX-AB2X-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:0/20:0/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null embryonic fibroblast cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.10303 anterior pretectal nucleus, dorsal core part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21633 POLR2AphosphoS5_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SW 837 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.951674 liver HPA Tissue Protein Expression Profiles -1.0 -1.14713 Perturb_1355_KO_circSCL38A1_SRP342299 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -9.20478 CTCF_GM19239_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null layer 4 of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02874 ChIP_H3K27me3_20682450_humanESC ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-OHPM-0006-SM-2HMKU GTEx Tissue Sample Gene Expression Profiles 1.0 1.02326 Neuralgia CTD Gene-Disease Associations 1.0 1.15627 TG(16:0/16:1(9Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null organophosphate biosynthetic process GO Biological Process Annotations 2015 1.0 null TG(18:0/14:0/18:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Neural Tube Defects CTD Gene-Disease Associations 1.0 1.58421 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K27me3_mononuclear cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CI-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HT-115 COSMIC Cell Line Gene Mutation Profiles 1.0 null KDM4A ENCODE Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CW-5585-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SMARCB1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null superior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.00955 gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.419623 SP1 ENCODE Transcription Factor Targets 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DG-A2KH-01A-21R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SPI1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_14101_KO_ARID1A_SRP355686 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 17.857 Perturb_6583_KO_Setd1b_SRP308727 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 12.4855 A-673 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.45801 TG(18:0/18:2(9Z,12Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null frontal pole, left, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.905047 TK10 COSMIC Cell Line Gene Mutation Profiles 1.0 null reticular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.849955 GTEX-UPJH-0526-SM-4IHK8 GTEx Tissue Sample Gene Expression Profiles 1.0 1.18552 HCC2885 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 MTF2 ChEA Transcription Factor Targets 1.0 null H3K9ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_15475_OE_Bhlhe22_SRP371884 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/20:3(8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-QCQG-0126-SM-48U27 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.36922 RAJI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.924927 Adenoma, Liver Cell CTD Gene-Disease Associations 1.0 1.57498 ets_00000000_2008_ovarian_cancer_cells_gof_human_gpl6244_gse21129 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 1.0331 Epilepsy, Tonic-Clonic CTD Gene-Disease Associations 1.0 1.13245 Perturb_16454_KO_CHUK_SRP229998 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 JUN_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Chromosome Aberrations CTD Gene-Disease Associations 1.0 1.25028 GTEX-S7SF-0226-SM-3K2BI GTEx Tissue Sample Gene Expression Profiles 1.0 0.926657 TCF7L2_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XLM4-0726-SM-4AT64 GTEx Tissue Sample Gene Expression Profiles 1.0 2.89796 GTEX-WHPG-0004-SM-3NMDO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.07793 urinary system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null H3K27ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MIA PACA-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.971615 intracellular COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 NCI-H28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 amygdaloid complex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.72915 GTEX-RU72-0008-SM-46MV8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.37763 Undecanoyl-CoA HMDB Metabolites of Enzymes 1.0 null mRNA_KLF4_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null hsa-miR-4728-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 adrenal_4a HPA Tissue Sample Gene Expression Profiles -1.0 -1.02608 H3K9me3_G1E_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null KMS-12-BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.00167 KARPAS-1106P Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.28427 r6 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04643 SMAD3-21741376-HESC-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me3_skeletal muscle cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MCAD_KO_GDS4546_423_mouse_liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-WVLH-0011-R6A-SM-3MJFZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00903 fallopian tube HPA Tissue Protein Expression Profiles 1.0 0.776827 GTEX-Q2AH-0126-SM-48U2B GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52374 H3K27me3_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2970-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-69-8255-01A-11R-2287-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lymph node disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.263722 superficial stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32077 decitabine_homo sapiens_gpl570_gse30985 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-TKQ1-0006-SM-33HBI GTEx Tissue Sample Gene Expression Profiles 1.0 2.55489 trunk TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.244545 MYC_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNF4A ChEA Transcription Factor Targets 1.0 null Perturb_3258_KD_EZH2_SRP044056 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 GTEX-P4QT-1326-SM-3NMD3 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.73321 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5879-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null small intestine HPA Tissue Gene Expression Profiles 1.0 0.926361 GTEX-TMMY-0426-SM-33HBB GTEx Tissue Sample Gene Expression Profiles 1.0 1.246 NCI-H292 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null organelle membrane GO Cellular Component Annotations 2015 1.0 null GTEX-QDT8-0011-R5A-SM-32PKN GTEx Tissue Sample Gene Expression Profiles -1.0 -0.841383 KDM5B ENCODE Transcription Factor Targets 1.0 null H3K4me3_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null hsa-miR-4263 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 Perturb_15277_OE_Foxa1_SRP189075 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -3.44175 VZ in subcallosal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.09038 Pheochromocytoma and Paraganglioma_PCPG_TCGA-PR-A5PG-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TCF12_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1MN-01A-11R-A14Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZBTB7A_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/18:0/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_HeLa-S3_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null HD-MY-Z COSMIC Cell Line Gene Mutation Profiles 1.0 null Fatty Liver CTD Gene-Disease Associations 1.0 2.37058 putamen, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07628 lung TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.284607 cytoplasmic part GO Cellular Component Annotations 2015 1.0 null TG(16:0/18:0/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H4K20me1_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null fat pad TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.473092 Eye Diseases CTD Gene-Disease Associations 1.0 1.54184 SKBR3 CCLE Cell Line Gene CNV Profiles 1.0 1.38387 cv-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.193235 Retrosplenial area, dorsal part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.85052 GTEX-PLZ4-1226-SM-2I5FE GTEx Tissue Sample Gene Expression Profiles 1.0 1.71924 liver TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.219485 Lung squamous cell carcinoma_LUSC_TCGA-85-8072-01A-31R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_SK-N-MC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-P44H-0008-SM-48TDW GTEx Tissue Sample Gene Expression Profiles -1.0 -0.824324 macrophage cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.622639 H3K9ac_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(16:1(9Z)/18:0/18:0)[iso3] HMDB Metabolites of Enzymes 1.0 null G121 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.894387 DOT1L_DELETION_GDS4295_428_mouse_AF9 - Mixed Lineage Leukemia (MLL) cells - 7 days GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-X4EP-0326-SM-3P5Z6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.04722 Disseminated Intravascular Coagulation CTD Gene-Disease Associations 1.0 1.12117 OVTOKO CCLE Cell Line Gene Expression Profiles 1.0 1.40313 JUN_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SU-DHL-6 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.49919 HT-115 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.71951 respiratory system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.335046 EZH2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null skeletal system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.05143 GTEX-OIZI-0726-SM-2XCEI GTEx Tissue Sample Gene Expression Profiles 1.0 1.54331 nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.042333 periventricular stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09899 TRIM28_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/14:0/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null CTCF_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:1(9Z)/18:1(9Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null TG(18:2(9Z,12Z)/18:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null RPMI8402 CCLE Cell Line Gene CNV Profiles 1.0 2.26916 H3K4me3_Jurkat_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null TEAD4_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PU.1 MotifMap Predicted Transcription Factor Targets 1.0 null ERG-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null ZNF384 ENCODE Transcription Factor Targets 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) HMDB Metabolites of Enzymes 1.0 null YY1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lauroyl-CoA HMDB Metabolites of Enzymes 1.0 null GTEX-R53T-1526-SM-48FEK GTEx Tissue Sample Gene Expression Profiles 1.0 2.05028 Rif1_KD_GDS4943_243_mouse_F1 embryonic stem cell (ESCs) line GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-RNOR-0926-SM-2TF56 GTEx Tissue Sample Gene Expression Profiles 1.0 0.898405 H3K27me3_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_11632_KD_HSPC182_SRP113334 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.67432 Pseudotumor Cerebri CTD Gene-Disease Associations 1.0 1.12254 GTEX-S7SF-2026-SM-3K2AS GTEx Tissue Sample Gene Expression Profiles 1.0 3.55389 primary motor-sensory cortex (samples)_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.871789 17616640-TableS3 GeneSigDB Published Gene Signatures 1.0 null HCC202 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.00977 H3K4me1_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null CLDN1_OE_GDS3510_393_human_CL1-5 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null excretory gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 GTEX-QMR6-0011-R7A-SM-32PKL GTEx Tissue Sample Gene Expression Profiles -1.0 -1.15281 Liver hepatocellular carcinoma_LIHC_TCGA-G3-A5SL-01A-11R-A27V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SMARCC2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:1(9Z)/14:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null r5 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35277 H3K4me3_Mobilized CD34 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null LPA(18:1(9Z)/0:0) HMDB Metabolites of Enzymes 1.0 null GTEX-OHPN-0011-R2A-SM-2I5FB GTEx Tissue Sample Gene Expression Profiles -1.0 -0.984388 GTEX-RM2N-0326-SM-48FD8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01513 MYC_OE_GSE43730_684_human_MCF10A cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null ventromedial preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.91748 GTEX-Q734-0426-SM-48TZX GTEx Tissue Sample Gene Expression Profiles -1.0 -1.61171 Isobutyryl-CoA HMDB Metabolites of Enzymes 1.0 null eye and adnexa disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.042806 H3K4me1_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null tardbp_19910924_hek293e_lof_human_gpl570_gds3730 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.483805 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5988-11A-01R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_cardiac fibroblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null macrophage TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.383637 GATA2 JASPAR Predicted Transcription Factor Targets 1.0 null hek293t GeneRIF Biological Term Annotations 1.0 null Retrosplenial area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.82119 Infralimbic area, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.14925 dorsal cochlear nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.37748 Prenatal Injuries CTD Gene-Disease Associations 1.0 1.68506 UBC Pathway Commons Protein-Protein Interactions 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A3WC-01A-31R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral medullary reticular group, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.0752 primary auditory cortex (core)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.939437 GTEX-QDT8-0011-R1A-SM-32PKS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.41921 ZNF384_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.54555 Lung squamous cell carcinoma_LUSC_TCGA-18-3408-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Copula pyramidis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18514 Muscular Diseases CTD Gene-Disease Associations 1.0 1.755 H3K4me1_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TG(16:0/20:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K9ac_Adipose Nuclei Roadmap Epigenomics Histone Modification Site Profiles 1.0 null RUNX2 ChEA Transcription Factor Targets 1.0 null JUND_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-XPVG-0008-SM-4GICH GTEx Tissue Sample Gene Expression Profiles -1.0 -0.892111 ZNF281 ChEA Transcription Factor Targets 1.0 null H3K4me2_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null BHLHE40_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null tail of caudate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.88684 GATA2-19941826-K562-human ChEA Transcription Factor Binding Site Profiles 1.0 null transferase activity GO Molecular Function Annotations 2015 1.0 null H3K4me3_endothelial cell of umbilical vein_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Drug-Related Side Effects and Adverse Reactions CTD Gene-Disease Associations 1.0 2.01992 lysophosphatidic acid acyltransferase activity GO Molecular Function Annotations 2015 1.0 null TG(16:0/18:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null bmi1_17452456_medulloblastoma_lof_human_gpl570_gds2724 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.769888 TG(16:1(9Z)/18:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null CTCF_GM12873_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null leukocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.271952 posterior (caudal) superior temporal cortex (area 22c)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.28901 TG(18:1(11Z)/16:1(9Z)/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me1_GM12878_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NPJ7-0011-R4a-SM-2I3GJ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.68127 GTEX-OOBJ-1026-SM-3NB2L GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20066 HCC1143 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10515 GTEX-UTHO-0011-R1A-SM-3GIJO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.66105 LPA(P-16:0e/0:0) HMDB Metabolites of Enzymes 1.0 null membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.375818 GTEX-T6MN-0011-R7A-SM-32QP5 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.948188 GTEX-T6MO-1226-SM-4DM5S GTEx Tissue Sample Gene Expression Profiles 1.0 0.927341 TG(20:0/20:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null POLR2A_HGPS cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_4387_KO_STAG2_SRP348449 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 10.3786 H3K4me3_GM12864_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-W5WG-0006-SM-3GIJT GTEx Tissue Sample Gene Expression Profiles 1.0 0.95912 Lung squamous cell carcinoma_LUSC_TCGA-O2-A52S-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null periventricular stratum of m2Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51239 Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3440-01A-02R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Necrosis CTD Gene-Disease Associations 1.0 2.43825 their GeneRIF Biological Term Annotations 1.0 null Pancreatic Neoplasms CTD Gene-Disease Associations 1.0 1.33995 gigantocellular reticular nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.30733 intracellular organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.343421 H3K4me1_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_brain microvascular endothelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null E2F4_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SMC3 ENCODE Transcription Factor Targets 1.0 null ChIP_RNF2_18974828 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-NFK9-0008-SM-4E3JE GTEx Tissue Sample Gene Expression Profiles -1.0 -2.12892 MYC_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null layer 1 of PaS Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0383 Perturb_11551_OE_SIRT6_SRP394380 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -3.27745 H3K27me3_bronchial epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SPSB1 Hub Proteins Protein-Protein Interactions 1.0 null pronephros TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.381755 GTEX-U4B1-0006-SM-3DB8E GTEx Tissue Sample Gene Expression Profiles 1.0 1.90315 A549 Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 0.944175 H3K4me3_cardiac fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6325-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of the Fc Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18414 CA4 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.43405 SUZ12 ChEA Transcription Factor Targets 1.0 null membrane part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 microneme COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 1.20189 TG(18:2(9Z,12Z)/18:1(9Z)/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null FOXA2 ENCODE Transcription Factor Targets 1.0 null CHD1_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AI-0226-SM-48U1D GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13686 TG(18:1(9Z)/18:1(11Z)/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null ZNF143 ENCODE Transcription Factor Targets 1.0 null GTEX-VUSH-0005-SM-3NB2H GTEx Tissue Sample Gene Expression Profiles 1.0 1.96959 Perturb_12245_KD_EglN2_SRP325972 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Perturb_6095_KD_ZNF207_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 YY1_K562_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null adrenal gland GTEx Tissue Gene Expression Profiles -1.0 -1.40802 H3K4me3_GM12878_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null kidney TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.243294 regulation of tor signaling GO Biological Process Annotations 2015 1.0 null endomembrane system COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 GTEX-WEY5-0008-SM-4LMKC GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28536 consisted GeneRIF Biological Term Annotations 1.0 null GTEX-OHPN-0011-R7A-SM-2I5FI GTEx Tissue Sample Gene Expression Profiles -1.0 -0.931696 (2E)-Dodecenoyl-CoA HMDB Metabolites of Enzymes 1.0 null ELAVL1 Pathway Commons Protein-Protein Interactions 1.0 null microcellular tegmental nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13718 H3K4me3_Adipose Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null neoplasm of the breast GWASdb SNP-Phenotype Associations 1.0 0.486163 posterior part of Int Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.65658 KAT2B ENCODE Transcription Factor Targets 1.0 null MCC13 COSMIC Cell Line Gene Mutation Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A2QG-01A-11R-A18M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:1(9Z)/18:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-XMK1-0926-SM-4B66X GTEx Tissue Sample Gene Expression Profiles 1.0 1.4888 MCF10DCIS.COM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.00045 TP53 JASPAR Predicted Transcription Factor Targets 1.0 null POLR2A_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_16453_KO_CHUK_SRP229998 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 abnormal internal genitalia GWASdb SNP-Phenotype Associations 1.0 0.13744 hESC_Derived_CD184+_Endoderm_Cultured_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -0.869398 oval paracentral nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.14122 CEBPD_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPB_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intrinsic component of membrane GO Cellular Component Annotations 2015 1.0 null Paraventricular hypothalamic nucleus, parvicellular division, medial parvicellular part, dorsal zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34564 H3K4me1_CD4+ CD25- CD45RA+ Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(16:0/16:0/16:0)[iso] HMDB Metabolites of Enzymes 1.0 null SW156 COSMIC Cell Line Gene Mutation Profiles 1.0 null striatum_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.916492 GTEX-N7MT-0011-R4a-SM-2I3G9 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.955271 H3K4me1_CD4+ CD25+ CD127- Treg Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null KMS-26 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.00253 H3K79me2_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QVUS-0226-SM-3GIJY GTEx Tissue Sample Gene Expression Profiles 1.0 1.1762 Perturb_6518_KD_S100A4_SRP105051 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 NCI-H748 COSMIC Cell Line Gene Mutation Profiles 1.0 null TG(16:1(9Z)/20:1(11Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null parasubicular cortex (parasubiculum) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.879671 ARNT-22903824-MCF7-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null 1-acylglycerol-3-phosphate o-acyltransferase activity GO Molecular Function Annotations 2015 1.0 null REST_01_338 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.74071 intermediate stratum of r3Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03806 prostate cancer GWASdb SNP-Disease Associations 1.0 0.570595 GTEX-SN8G-1526-SM-4DM79 GTEx Tissue Sample Gene Expression Profiles 1.0 0.895669 H3K27me3_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9me3_G1E_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null TAL1 ENCODE Transcription Factor Targets 1.0 null EED ChEA Transcription Factor Targets 1.0 null RCOR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_cardiac mesoderm_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XMK1-0626-SM-4B65A GTEx Tissue Sample Gene Expression Profiles 1.0 1.13272 GTEX-WVLH-0011-R4A-SM-3MJFS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.86453 Tremor CTD Gene-Disease Associations 1.0 1.1403 PANC0203 CCLE Cell Line Gene CNV Profiles 1.0 1.41657 POLR2AphosphoS5_neural cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_15741_KO_Nr2e3_SRP086591 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 H3K4me3_keratinocyte_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null RAD21_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null motor nucleus of trigeminal nerve, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.909106 ETS2_KD_GDS5040_9_human_H441 lung cancer cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null H3K4me3_CD19 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(16:0/16:1(9Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null bounding membrane of organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.002908 TBP_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null tumour GeneRIF Biological Term Annotations 1.0 null H3K4me1_CD8 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null hsa-let-7e TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 anteroventral periventricular preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77958 hsa-miR-4500 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 r4 part of pontine raphe cell population Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30405 Prostate adenocarcinoma_PRAD_TCGA-G9-6373-01A-11R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-3074-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 hsa-miR-1284 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 EZH2_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null CCNT2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cell part LOCATE Curated Protein Localization Annotations 1.0 null GTEX-NFK9-0526-SM-2YUNL GTEx Tissue Sample Gene Expression Profiles -1.0 -0.880042 duodenum_4c HPA Tissue Sample Gene Expression Profiles 1.0 1.10559 TFAP2A ENCODE Transcription Factor Targets 1.0 null GTEX-P44H-0011-R1A-SM-3NM8J GTEx Tissue Sample Gene Expression Profiles -1.0 -1.85974 GTEX-XLM4-2026-SM-4AT4X GTEx Tissue Sample Gene Expression Profiles 1.0 0.941847 Gustatory areas, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21339 C-33 A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null SUZ12_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null nervous system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.357058 NCI-H2347 COSMIC Cell Line Gene Mutation Profiles 1.0 null ILF3_02_94 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.58636 Perturb_6260_KD_NDP_SRP188348 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 10.204 trans-2-Hexenoyl-CoA HMDB Metabolites of Enzymes 1.0 null Hepatomegaly CTD Gene-Disease Associations 1.0 2.13469 GTEX-U3ZN-0006-SM-3DB7Y GTEx Tissue Sample Gene Expression Profiles 1.0 1.04952 Perturb_126_KD_Tcf7l2_SRP100171 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -7.75575 layer 4 of ERCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.05005 Adrenocortical carcinoma_ACC_TCGA-OR-A5J6-01A-31R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-24 TargetScan Predicted Conserved microRNA Targets 1.0 0.90397 Hypersensitivity CTD Gene-Disease Associations 1.0 1.09857 GTEX-RVPU-0011-R1A-SM-2XCAI GTEx Tissue Sample Gene Expression Profiles -1.0 -3.19705 TG(18:2(9Z,12Z)/18:2(9Z,12Z)/18:3(6Z,9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Perturb_15223_KD_FOXC1_SRP276213 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 4.542 H3K4me3_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_WERI-Rb-1_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-60-2722-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K9ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null EGR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XUZC-1426-SM-4BRV3 GTEx Tissue Sample Gene Expression Profiles 1.0 0.852363 H3K27me3_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null miR-124_OE_GDS2657_771_human_HepG2 cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Perturb_9187_OE_NeuroD4_SRP390425 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 basomedial nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.12488 GTEX-XLM4-0004-SM-4AT5I GTEx Tissue Sample Gene Expression Profiles -1.0 -1.38811 hsa-miR-583 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 uterine cervix TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null NR1H3 ChEA Transcription Factor Targets 1.0 null H3K4me1_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null GTEX-R55E-0011-R7A-SM-2TC5Z GTEx Tissue Sample Gene Expression Profiles -1.0 -0.836561 H3K4me1_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null u87 HPA Cell Line Gene Expression Profiles 1.0 0.976142 NCI-H889 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.841458 H3K27me3_BJ_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RWSA-1426-SM-47JXA GTEx Tissue Sample Gene Expression Profiles 1.0 1.54887 GTEX-OOBK-0005-SM-2YUMG GTEx Tissue Sample Gene Expression Profiles 1.0 1.10015 SU-DHL-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.42992 brown adipose tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.561245 corticoid layer of TuPal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.4533 Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-5629-01A-01R-1873-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intracellular organelle LOCATE Curated Protein Localization Annotations 1.0 null H3K4me1_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null cell part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 GTEX-OOBJ-1626-SM-2I3F7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.88993 SW48 COSMIC Cell Line Gene Mutation Profiles 1.0 null SUDHL6 CCLE Cell Line Gene CNV Profiles -1.0 -1.71497 GTEX-S3XE-0006-SM-3K2AA GTEx Tissue Sample Gene Expression Profiles 1.0 1.18668 facial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.63453 GTEX-XOT4-0526-SM-4B66O GTEx Tissue Sample Gene Expression Profiles 1.0 1.0151 H3K9ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TBL1XR1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-21-1075-01A-01R-0692-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of the Fc Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18414 RCOR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EZH2_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S32W-0126-SM-4AD61 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.42035 r10 part of spinal trigeminal nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.39266 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null NCI-H2122 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.08429 NCI-H1373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.66187 GTEX-OIZF-0006-SM-2I5GQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.60792 primary visual cortex (striate cortex, area V1/17)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.1251 erg_19359602_huvec_lof_human_gpl570_gds3557 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -1.18724 H3K4me3_HeLa-S3_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A20O-01A-21R-A14Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nuclear outer membrane-endoplasmic reticulum membrane network COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 H3K4me3_foreskin fibroblast_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H2AFZ_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HIF-2alpha_DEPLETION_GDS2760_643_human_Hypoxic MCF-7 breast cancer cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null H3K4me3_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null NCIH1355 CCLE Cell Line Gene CNV Profiles 1.0 1.51575 HS 69ST Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.36476 TG(18:3(9Z,12Z,15Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso6] HMDB Metabolites of Enzymes 1.0 null dentate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.37187 non-small cell lung carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.138994 H3K4me3_fibroblast of pulmonary artery_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null KDM1A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:0/18:1(9Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null r11 part of spinal trigeminal nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76323 POLR2AphosphoS2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Substance Withdrawal Syndrome CTD Gene-Disease Associations 1.0 1.41257 autosomal dominant disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.050263 RBBP5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_14323_KD_PDK1_SRP234024 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 single-organism biosynthetic process GO Biological Process Annotations 2015 1.0 null reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052117 TRIM28 ENCODE Transcription Factor Targets 1.0 null Metabolism of lipids and lipoproteins Reactome Pathways 2014 1.0 null POLR2A_cerebellum_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null gracile nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.21784 pcgf2_17452456_medulloblastoma_lof_human_gpl570_gds2724 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.451591 ETV5_01_304 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 1.69982 Cognition Disorders CTD Gene-Disease Associations 1.0 1.80548 RH-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-22-5477-01A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Eicosanoyl-CoA HMDB Metabolites of Enzymes 1.0 null TFAP2A_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-N417 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.50708 GTEX-SN8G-0326-SM-32PLG GTEx Tissue Sample Gene Expression Profiles 1.0 2.54614 nucleus incertus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06054 Retrosplenial area, dorsal part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13973 pancreas GTEx Tissue Gene Expression Profiles -1.0 -1.27443 small cell lung cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.317315 TG(20:1(11Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(15:0/20:0/14:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Perturb_1995_KD_Sun1/Sun2_SRP354599 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -6.20277 GTEX-WFJO-0005-SM-3GIKY GTEx Tissue Sample Gene Expression Profiles 1.0 0.835869 TG(16:1(9Z)/14:0/18:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null disease of cellular proliferation GWASdb SNP-Disease Associations 1.0 0.053689 Heart Defects, Congenital CTD Gene-Disease Associations 1.0 1.7181 Retrosplenial area, ventral part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.14925 GTEX-WL46-0011-R2A-SM-3LK6O GTEx Tissue Sample Gene Expression Profiles -1.0 -0.913314 GTEX-WY7C-0226-SM-3NB37 GTEx Tissue Sample Gene Expression Profiles 1.0 1.33709 H3K4me1_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null 50nM_dasatinib vs ctrl_K562 (Human) [19651622] SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs -1.0 null MAX_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PHF8_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Primary somatosensory area, mouth, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02081 TG(20:0/20:0/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-R53T-1826-SM-3GIJX GTEx Tissue Sample Gene Expression Profiles 1.0 1.0395 GTEX-OIZH-0005-SM-2HMJN GTEx Tissue Sample Gene Expression Profiles 1.0 1.16468 FOS ENCODE Transcription Factor Targets 1.0 null disease GWASdb SNP-Disease Associations 1.0 0.030984 bone marrow HPA Tissue Protein Expression Profiles -1.0 -1.14713 GTEX-QDVN-2426-SM-2S1Q4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.15925 RFX5_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_U-87 MG_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TCF7L2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_8418_KO_Yap1/Wwtr1_SRP143461 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 16.6874 Perturb_10910_KO_Thbs1_SRP276889 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 8.64589 mRNA_SOX9_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null EP300_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MAX_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_6612_KD_ATF2SV5_SRP072851 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 12.5084 CHD1 ENCODE Transcription Factor Targets 1.0 null Perturb_1989_KO|OE_Trp53|Fos_SRP091903 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 3.40191 CTCF_WERI-Rb-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_iPS DF 6.9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-XBED-0006-SM-47JXO GTEx Tissue Sample Gene Expression Profiles 1.0 0.942953 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:3(9Z,12Z,15Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-QEG5-0426-SM-2I5GJ GTEx Tissue Sample Gene Expression Profiles 1.0 0.965637 TBL1XR1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2228 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.852321 hsa-miR-4799-3p TargetScan Predicted Conserved microRNA Targets 1.0 0.997906 POLR2A_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Paraventricular hypothalamic nucleus, magnocellular division, medial magnocellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.45616 mantle zone of r10Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.17169 organophosphate metabolic process GO Biological Process Annotations 2015 1.0 null GTEX-V955-0726-SM-3GAFG GTEx Tissue Sample Gene Expression Profiles 1.0 0.842519 ULK1_knockout_198_GSE60778 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.16839 GTEX-SNOS-0006-SM-32PLH GTEx Tissue Sample Gene Expression Profiles 1.0 1.31718 prostate cancer GWASdb SNP-Phenotype Associations 1.0 0.486163 YY1 ENCODE Transcription Factor Targets 1.0 null GTEX-QV31-0008-SM-447AT GTEx Tissue Sample Gene Expression Profiles -1.0 -0.97143 Perturb_1789_KO_Irf8_SRP265303 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 7.32324 Heptadecanoyl CoA HMDB Metabolites of Enzymes 1.0 null dactinomycin_mus musculus_gpl1261_wild type_gds2456 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K27me3_cardiac mesoderm_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_megakaryocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Ventromedial hypothalamic nucleus, anterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.87238 TG(15:0/16:0/20:3(8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Perturb_6170_KD_PROX1_SRP073100 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 4.44353 Liver hepatocellular carcinoma_LIHC_TCGA-FV-A3I0-11A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null reuniens nucleus (medioventral nucleus) of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.09719 p70s6k GeneRIF Biological Term Annotations 1.0 null Perturb_11605_KD_ALOX5_SRP113334 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.67868 TG(10:0/10:0/10:0)[iso] HMDB Metabolites of Enzymes 1.0 null ventral pallidum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.20988 Perturb_3585_OE_CBFBMYH11_SRP312248 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 other source TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.389666 monocytic leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.220152 smooth muscle HPA Tissue Protein Expression Profiles -1.0 -1.14713 TG(18:0/14:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-WL46-0011-R7A-SM-3LK7X GTEx Tissue Sample Gene Expression Profiles -1.0 -1.06299 pancreas HPA Tissue Protein Expression Profiles 1.0 0.776827 GTEX-UTHO-0011-R4A-SM-3GIJP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01367 TG(18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-TMMY-0008-SM-4DXU3 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.950475 H3K4me3_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CFPAC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.02558 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A73D-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(20:4(5Z,8Z,11Z,14Z)/18:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null TROVE2 Hub Proteins Protein-Protein Interactions 1.0 null protein complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.041396 Hearing Loss CTD Gene-Disease Associations 1.0 1.05757 Perturb_10395_KD_USP11_SRP200727 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 9.80529 H3K4me1_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-LA-A446-01A-21R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_339_KD_EIF4A1_SRP072285 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 10.5246 GTEX-XUJ4-0126-SM-4BOP7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00919 Lung squamous cell carcinoma_LUSC_TCGA-77-6843-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5JV-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HT-115 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6940-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsal thalamus_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.11135 RCOR1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null kidney_b HPA Tissue Sample Gene Expression Profiles 1.0 1.58639 H3K4me1_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-X88G-0006-SM-47JX5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.22502 GTEX-RU1J-0006-SM-2TF6M GTEx Tissue Sample Gene Expression Profiles 1.0 1.31735 cervical carcinoma cell TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null H3K9ac_Brain Cingulate Gyrus Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-Q734-0006-SM-2I3FJ GTEx Tissue Sample Gene Expression Profiles 1.0 1.10713 TG(16:0/14:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K9ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-5899-01A-11R-1628-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-FV-A3R3-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IMR-32 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.65421 SW 1573 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.948077 intracellular part LOCATE Predicted Protein Localization Annotations 1.0 null Ectorhinal area/Layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.62147 mRNA_TCF3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null RARRES1_KD_GDS4818_314_human_SUM149 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null HCC2911 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.14551 mediodorsal nucleus of thalamus_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.23252 raphe magnus nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.1048 CREB1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WH7G-0526-SM-3NMBI GTEx Tissue Sample Gene Expression Profiles 1.0 1.34831 tissues, cell types and enzyme sources TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 Perturb_5969_KD_SUV39H2_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.38507 Perturb_16365_KO_Auf1_SRP076844 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.54783 kidney HPA Tissue Gene Expression Profiles 1.0 1.65943 GTEX-WFG8-2426-SM-3GILL GTEx Tissue Sample Gene Expression Profiles 1.0 1.37243 TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null hsa-miR-4777-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 ductal carcinoma in situ DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.257358 GTEX-S32W-1226-SM-4AD67 GTEx Tissue Sample Gene Expression Profiles 1.0 1.19714 SMAD3-18955504-HaCaT-human ChEA Transcription Factor Binding Site Profiles 1.0 null H3K4me3_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null EFM-19 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.865188 epithelioma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.054666 GTEX-TML8-1826-SM-32QOR GTEx Tissue Sample Gene Expression Profiles 1.0 1.64085 animal TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 1.0758 H3K4me3_fibroblast of lung_hg19_7 ENCODE Histone Modification Site Profiles 1.0 null CAPAN-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.37478 SKMES1 CCLE Cell Line Gene CNV Profiles 1.0 1.42338 Perturb_17422_KO_Mbnl1_SRP225192 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 11.1699 H3K27ac_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Q-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null triacylglycerol biosynthesis HumanCyc Pathways 1.0 null substantia nigra, reticular part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06263 Liver hepatocellular carcinoma_LIHC_TCGA-G3-A5SK-01A-11R-A27V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OHPM-1026-SM-3LK74 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.905119 Perturb_12741_KD_WDR5_SRP261594 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -14.5025 COLO 678 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null H3K4me3_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SNU-601 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 GTEX-OXRK-0526-SM-3NB2F GTEx Tissue Sample Gene Expression Profiles -1.0 -0.98959 TG(18:2(9Z,12Z)/16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me1_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ATR_knockdown_120_GSE27869 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.89511 SMARCC2 ENCODE Transcription Factor Targets 1.0 null gonad TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null superficial stratum of ERCx (cortical plate/marginal zone) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.72234 TG(18:1(9Z)/14:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Perturb_4551_KD_Kdm1a_SRP126769 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.3694 endocrine gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.352227 mRNA_ZSCAN4C_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-WL46-0011-R9A-SM-3MJFP GTEx Tissue Sample Gene Expression Profiles -1.0 -0.866431 ovary BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.868511 POLR2A_HeLa-S3_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null MCAD_KO_GDS4546_422_mouse_liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null FOSL2_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null VZ in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.33713 endoplasmic reticulum GO Cellular Component Annotations 2015 1.0 null Infertility, Male CTD Gene-Disease Associations 1.0 1.55648 cell lysate TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.677395 COLO-783 COSMIC Cell Line Gene Mutation Profiles 1.0 null TG(16:1(9Z)/20:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null introns GeneRIF Biological Term Annotations 1.0 null RCOR1 ENCODE Transcription Factor Targets 1.0 null GTEX-O5YV-2026-SM-2D7VS GTEx Tissue Sample Gene Expression Profiles 1.0 1.004 H3K27me3_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CHD2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UTHO-0011-R6A-SM-3GIJW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01088 GTEX-WEY5-2126-SM-3GILK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.24866 TG(18:1(9Z)/20:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null epidermal lamellar body COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 1.10868 19331821-SuppTable5 GeneSigDB Published Gene Signatures 1.0 null CHD4_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:1(9Z)/14:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-TMZS-0006-SM-3DB8G GTEx Tissue Sample Gene Expression Profiles 1.0 1.04008 H3K9ac_Rectal Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-3168 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 CEBPB_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null HDAC1 ENCODE Transcription Factor Targets 1.0 null 16166618-SuppTable4 GeneSigDB Published Gene Signatures 1.0 null H2AFZ_B cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_Panc1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SU-DHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.895023 Left_Ventricle Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.20515 GTEX-XBEW-0002-SM-4AT5O GTEx Tissue Sample Gene Expression Profiles -1.0 -2.63469 TG(22:5(7Z,10Z,13Z,16Z,19Z)/18:3(9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-S4P3-0926-SM-4AD54 GTEx Tissue Sample Gene Expression Profiles 1.0 1.80347 striatum_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.00356 POLR2A_HCT116_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/14:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Lung adenocarcinoma_LUAD_TCGA-78-7154-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null TG(16:0/16:1(9Z)/16:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null TG(16:1(9Z)/18:1(9Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null TG(18:0/18:0/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K4me2_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XGQ4-0004-SM-4AT5S GTEx Tissue Sample Gene Expression Profiles -1.0 -1.98067 H3K4me3_cardiac muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-22-5479-01A-31R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_choroid plexus epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null hematopoietic system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.314772 mediodorsal nucleus of thalamus_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.74291 H3K9ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ATF3 ENCODE Transcription Factor Targets 1.0 null JUND_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r4 part of cochlear sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13533 GTEX-TSE9-0011-R6A-SM-3DB7L GTEx Tissue Sample Gene Expression Profiles -1.0 -0.905711 dorsal lateral geniculate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.15193 Weight Loss CTD Gene-Disease Associations 1.0 1.99062 link GeneRIF Biological Term Annotations 1.0 null H3K4me1_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CHD2_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Psoas_Muscle Roadmap Epigenomics Cell and Tissue Gene Expression Profiles 1.0 1.24849 Lung Diseases CTD Gene-Disease Associations 1.0 1.88277 H3K27ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me1_Brain Germinal Matrix Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(18:1(9Z)/18:1(9Z)/20:2(11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null ELF1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_Penis Foreskin Fibroblast Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_LNCaP clone FGC_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null 18381423-SuppTable1c GeneSigDB Published Gene Signatures 1.0 null TG(18:1(9Z)/20:1(11Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null COLO678 CCLE Cell Line Gene CNV Profiles -1.0 -1.77295 rhoptry COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.561358 EOL1 CCLE Cell Line Gene CNV Profiles 1.0 1.71476 TG(16:1(9Z)/20:0/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7242-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null breast epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.269521 CTCF_GM12873_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Anemia, Hemolytic CTD Gene-Disease Associations 1.0 1.58771 MYC_MCF-7_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null hmc1 HPA Cell Line Gene Expression Profiles 1.0 0.856322 Psychomotor Disorders CTD Gene-Disease Associations 1.0 1.052 Pancreatic adenocarcinoma_PAAD_TCGA-HZ-7926-01A-11R-2156-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-S341-1226-SM-4AD5S GTEx Tissue Sample Gene Expression Profiles 1.0 0.903205 NCI-H146 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.0991 Prostate adenocarcinoma_PRAD_TCGA-EJ-7315-01A-31R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_GM12865_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null intracellular part GO Cellular Component Annotations 2015 1.0 null trochlear nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.16281 lateral septal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.844939 GTEX-RWS6-0626-SM-2XCAS GTEx Tissue Sample Gene Expression Profiles 1.0 0.945615 H3K4me3_fibroblast of skin of abdomen_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.21831 viscus TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.316951 ZNF263 ENCODE Transcription Factor Targets 1.0 null H3K4me3_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_9485_KD_Appbp2_SRP359770 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 13.4659 MOLP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.09593 MHH-ES-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.943656 lipid metabolic process GO Biological Process Annotations 2015 1.0 null liminal reticular formation of m2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06645 CTCF_MCF-7_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-5965-02B-11R-A29R-07,TCGA-FG-5965-02A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:2(9Z,12Z)/18:2(9Z,12Z)/20:2(11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null biological regulation GO Biological Process Annotations 2015 1.0 null Thrombocytopenia CTD Gene-Disease Associations 1.0 1.10424 stomach HPA Tissue Protein Expression Profiles 1.0 0.776827 ventral posterior lateral nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.942954 H3K4me3_Neurosphere Cultured Cells Ganglionic Eminence Derived Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Koelliker-Fuse nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0415 H3K4me3_K562_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-J1-A4AH-01A-31R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null STAT3 ENCODE Transcription Factor Targets 1.0 null Lung Injury CTD Gene-Disease Associations 1.0 1.34955 POLR2A_GM18951_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null liminal periaqueductal gray of m2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51064 H3K4me3_HEK293_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(15:0/18:1(9Z)/16:0)[iso6] HMDB Metabolites of Enzymes 1.0 null TG(20:0/20:0/20:0) HMDB Metabolites of Enzymes 1.0 null MAX_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_MCF-7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_CD8 Memory Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MAZ_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/18:2(9Z,12Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null EMX2_Deficiency_GDS3173_607_mouse_Embryonic urogenital epithelium - day 10.5 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-TKQ1-0126-SM-33HB3 GTEx Tissue Sample Gene Expression Profiles 1.0 0.905734 small molecule metabolic process GO Biological Process Annotations 2015 1.0 null hsa-miR-4639-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 mRNA_NR2F2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null r6 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.69721 vestibular nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.911998 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7424-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null uterus TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null TG(16:1(9Z)/18:0/18:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null TOV-112D Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.46297 abnormal genital system morphology GWASdb SNP-Phenotype Associations 1.0 0.095824 abnormality of male internal genitalia GWASdb SNP-Phenotype Associations 1.0 0.486163 Perturb_11199_KD_Scap_SRP311091 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 9.80754 Phospholipid metabolism Reactome Pathways 2014 1.0 null Gustatory areas, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32963 H3K4me3_Stomach Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GLI2_01_143 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.59602 GTEX-X5EB-0008-SM-46MU3 GTEx Tissue Sample Gene Expression Profiles -1.0 -3.02128 mRNA_GATA3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null primary auditory cortex (core)_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.44611 HS 294T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.46915 GTEX-XV7Q-0226-SM-4BRVL GTEx Tissue Sample Gene Expression Profiles -1.0 -2.32424 cochlear nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.81657 Perturb_16549_KO_Cdk8_SRP061642 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 Heart Failure CTD Gene-Disease Associations 1.0 1.52566 EP300_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null lateral nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.44601 endoplasmic reticulum part GO Cellular Component Annotations 2015 1.0 null mantle zone of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.52977 GTEX-U3ZM-0226-SM-4DXTA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.3339 TG(18:3(9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-S7PM-0011-R6A-SM-3NM8F GTEx Tissue Sample Gene Expression Profiles -1.0 -2.03043 brain TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.2779 hsa-miR-4328 TargetScan Predicted Conserved microRNA Targets 1.0 0.23348 whole body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.758673 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5469-11A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:1(9Z)/18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null KLE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.947241 Liver Cirrhosis CTD Gene-Disease Associations 1.0 1.32458 FOXP2 ENCODE Transcription Factor Targets 1.0 null lung HPA Tissue Protein Expression Profiles -1.0 -1.14713 GTEX-N7MS-0011-R1a-SM-2HMJG GTEx Tissue Sample Gene Expression Profiles -1.0 -1.53442 GTEX-QDVJ-1126-SM-48U1U GTEx Tissue Sample Gene Expression Profiles -1.0 -1.37031 H3K27ac_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_5935_KD_MYBBP1A_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -14.2997 GTEX-XGQ4-1326-SM-4GIDU GTEx Tissue Sample Gene Expression Profiles 1.0 1.24919 TG(18:2(9Z,12Z)/18:1(9Z)/20:3(8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Hepatic Encephalopathy CTD Gene-Disease Associations 1.0 1.24528 GTEX-OXRK-0126-SM-3NB1E GTEx Tissue Sample Gene Expression Profiles -1.0 -2.20795 NCI-H2373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25384 GTF2F1 ENCODE Transcription Factor Targets 1.0 null NCI-H146 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.72197 11906190-Table1a-1 GeneSigDB Published Gene Signatures 1.0 null female reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052981 Paraflocculus, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3122 MYC_MCF-7_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null cytoplasmic membrane-bounded vesicle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.079454 CEBPB_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_3376_KO_Kat6a_SRP081081 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -3.48142 SIN3A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_NT2-D1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null HOP-62 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.925704 TAL1_megakaryocyte_mm9_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-4458 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 NCI-H2196 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.948077 H3K9me3_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-T7-A92I-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:0/14:0/16:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_Brain Substantia Nigra Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2838-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Ectorhinal area/Layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.6915 NR3C1_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CDK4_knockdown_225_GSE8866 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.14179 GTEX-WHWD-0826-SM-3LK6R GTEx Tissue Sample Gene Expression Profiles 1.0 1.39604 vestibular nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.910343 TG(18:2(9Z,12Z)/20:0/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null TG(18:1(9Z)/18:1(9Z)/20:3(5Z,8Z,11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Neoplasms, Experimental CTD Gene-Disease Associations 1.0 1.7562 H3K4me3_skeletal muscle cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Pheochromocytoma and Paraganglioma_PCPG_TCGA-SQ-A6I4-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-PLZ4-0926-SM-2S1OI GTEx Tissue Sample Gene Expression Profiles 1.0 1.27959 myeloid progenitor cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.154322 H3K4me3_cardiac mesoderm_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2828-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H2AFZ_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Dyslipidemias CTD Gene-Disease Associations 1.0 1.61667 Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -2.47221 GTEX-SIU7-1126-SM-2XCDW GTEx Tissue Sample Gene Expression Profiles 1.0 1.20107 superficial stratum of POH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05628 intracellular organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 H3K4me3_HEK293_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T5JC-0001-SM-3NMAK GTEx Tissue Sample Gene Expression Profiles -1.0 -1.80484 organelle LOCATE Curated Protein Localization Annotations 1.0 null AN3-CA COSMIC Cell Line Gene Mutation Profiles 1.0 null abnormality of the breast GWASdb SNP-Phenotype Associations 1.0 0.359386 CTCF_fibroblast of upper leg skin_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null UBTF_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 triglyceride biosynthetic process GO Biological Process Annotations 2015 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null WHSC1 ENCODE Transcription Factor Targets 1.0 null animal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.767783 Perturb_3775_KD_DPPA5_SRP041162 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 TG(22:5(7Z,10Z,13Z,16Z,19Z)/18:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H4K8ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null FOSL2_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null vesicle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.076068 Hyperkinesis CTD Gene-Disease Associations 1.0 1.41174 Renal Insufficiency CTD Gene-Disease Associations 1.0 1.38641 KDM5A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SUZ12 ENCODE Transcription Factor Targets 1.0 null TG(18:1(9Z)/20:0/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null SUZ12-18974828-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null TAF7L ChEA Transcription Factor Targets 1.0 null BRCA1 ENCODE Transcription Factor Targets 1.0 null CEBPB_C2C12_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:0/20:1(11Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null Perturb_3077_KO_Dct_ERP017365 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -3.46413 GTEX-X88G-0008-SM-47JWN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.57667 hsa-miR-4448 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 posteroventral (inferior) parietal cortex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.2588 TG(18:1(9Z)/18:1(9Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null MAX_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Rectum adenocarcinoma_READ_TCGA-AF-2691-11A-01R-A32Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lymph node HPA Tissue Protein Expression Profiles -1.0 -1.14713 H3K4me3_astrocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Neurotoxicity Syndromes CTD Gene-Disease Associations 1.0 1.95239 TG(22:5(7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null r7 part of the posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.80034 GTEX-WHPG-2226-SM-3NMBO GTEx Tissue Sample Gene Expression Profiles 1.0 0.928693 kidney cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.286381 H3K4me3_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RSV-A2_24Hour-B6.129PF1_J_None_GSE18170 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 2.16448 GTEX-RU72-0011-R6A-SM-2TF71 GTEx Tissue Sample Gene Expression Profiles -1.0 -2.20358 embryonic structure TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.057633 H3K4me3_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-5557-01A-01R-1514-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-OHPN-0011-R5A-SM-2I5FF GTEx Tissue Sample Gene Expression Profiles -1.0 -0.957338 HNT-34 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.75672 dorsolateral prefrontal cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.831651 Anteroventral periventricular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.49169 MAX_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2A_H54_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_2381_KO_ZEB1_ERP019883 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 FOSL1 ENCODE Transcription Factor Targets 1.0 null TEAD4 ENCODE Transcription Factor Targets 1.0 null TG(18:1(11Z)/16:0/18:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null COR-L88 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.84105 GTEX-PWCY-2326-SM-2I3EQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.14062 Perturb_3847_KD_HPSE_SRP185818 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -6.29288 primary auditory cortex (core)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.912593 TG(16:1(9Z)/16:1(9Z)/16:1(9Z))[iso] HMDB Metabolites of Enzymes 1.0 null Perturb_4651_KO_Tip55_SRP134924 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 4.57019 GTEX-NPJ8-1626-SM-2HMIY GTEx Tissue Sample Gene Expression Profiles 1.0 0.94741 Perturb_11619_KD_CTDSPL_SRP113334 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.02028 Skin Cutaneous Melanoma_SKCM_TCGA-GF-A3OT-06A-23R-A239-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null olfactory tubercle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.828735 rosiglitazone_homo sapiens_gpl570_gds2453 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me1_lung_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Transposition of Great Vessels CTD Gene-Disease Associations 1.0 1.12703 H3K27ac_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null YAP1 ChEA Transcription Factor Targets 1.0 null GTEX-REY6-0826-SM-2TF4S GTEx Tissue Sample Gene Expression Profiles 1.0 1.33508 POLR2A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTBP2 ENCODE Transcription Factor Targets 1.0 null TAF1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/14:0/16:1(9Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-OIZF-1526-SM-3MJGY GTEx Tissue Sample Gene Expression Profiles 1.0 0.829823 Perturb_13064_KO_Bak/Bax_SRP055036 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 hsa-miR-409-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 reveal GeneRIF Biological Term Annotations 1.0 null GTEX-P4QT-1626-SM-2S1NP GTEx Tissue Sample Gene Expression Profiles 1.0 1.17703 H3K9ac_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Hypertriglyceridemia CTD Gene-Disease Associations 1.0 1.21599 cellular_component LOCATE Curated Protein Localization Annotations 1.0 null Ectorhinal area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.4235 GTEX-U8T8-0008-SM-4DXSP GTEx Tissue Sample Gene Expression Profiles -1.0 -1.43234 H3K4me3_H7_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null EP300_ES-Bruce4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1693 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 H3K4me3_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(18:0/18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null LTBR_INHIBITION - 35 Day_GDS2005_732_mouse_Lymph nodes (MG-430B) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null TG(16:1(9Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-WWYW-0011-R7A-SM-3NB3H GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30679 GTEX-WZTO-0011-R4A-SM-3NMC7 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05663 organelle LOCATE Predicted Protein Localization Annotations 1.0 null TG(16:1(9Z)/18:1(9Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null primary motor cortex (area M1, area 4)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.853377 H2AFZ_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UJMC-0226-SM-4IHLH GTEx Tissue Sample Gene Expression Profiles -1.0 -1.0339 Perturb_5901_KD_CUX1_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -5.49431 reticular formation of JcPL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26112 cell part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.473215 GTEX-XUZC-0008-SM-4BOQG GTEx Tissue Sample Gene Expression Profiles -1.0 -0.837081 Retrosplenial area, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30705 Lung adenocarcinoma_LUAD_TCGA-38-4625-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CW-5581-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH1435 CCLE Cell Line Gene Expression Profiles 1.0 2.31801 TG(18:0/20:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Prelimbic area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.39937 intracellular part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.497015 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DS-A7WH-01A-22R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QDT8-0526-SM-3NMD8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.889731 Perturb_10920_KO_fatp2_SRP229353 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.9019 EZH2 ENCODE Transcription Factor Targets 1.0 null disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.594064 Median preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03663 SUM 1315M02 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.36155 dorsolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.18791 SUZ12_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPD ENCODE Transcription Factor Targets 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A57G-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(15:0/18:2(9Z,12Z)/16:0)[iso6] HMDB Metabolites of Enzymes 1.0 null NFIC_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EKVX Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.95366 JUND_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null CLDN1_OE_GDS3510_31_human_CL1-5 cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null NRL_Deficiency_GDS1693_238_mouse_Photoreceptors cells of retinas at P10 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-XUW1-1026-SM-4BONY GTEx Tissue Sample Gene Expression Profiles 1.0 0.937623 Lung squamous cell carcinoma_LUSC_TCGA-18-3412-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null induce GeneRIF Biological Term Annotations 1.0 null endoplasmic reticulum part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 GTEX-T5JC-0226-SM-32PMA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48427 GTEX-X4XX-0011-R4B-SM-46MWL GTEx Tissue Sample Gene Expression Profiles -1.0 -1.127 H3K4me3_WERI-Rb-1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null rosiglitazone_mus musculus_gpl1261_control_gds4036 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CHD7 ENCODE Transcription Factor Targets 1.0 null lipid particle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.63544 Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A2PC-01A-11R-A206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.23978 FOXP2_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QV44-2026-SM-2S1RD GTEx Tissue Sample Gene Expression Profiles 1.0 0.971819 GTEX-RU72-0126-SM-2TF6Z GTEx Tissue Sample Gene Expression Profiles 1.0 1.21002 GTEX-XGQ4-0226-SM-4GIDS GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10329 H4K20me1_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_CD4+ CD25- Th Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-TKQ2-0426-SM-4DXUO GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02701 adrenal gland HPA Tissue Gene Expression Profiles -1.0 -0.830196 H3K4me3_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLR2AphosphoS2_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF143_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27ac_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-85-7698-01A-11R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r1 part of principal trigeminal sensory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14853 H3K9ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPB_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung Neoplasms CTD Gene-Disease Associations 1.0 1.82185 H3K27me3_megakaryocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null trophozoite TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.32416 GTEX-XXEK-0005-SM-4BRWJ GTEx Tissue Sample Gene Expression Profiles 1.0 0.859246 H3K4me1_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null TG(16:0/18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null r9 part of spinal trigeminal nucleus, interpolar part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.43689 ChIP_SUZ12_18692474 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null E2F6_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane region COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.008503 SPI1 ENCODE Transcription Factor Targets 1.0 null JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RUNX2-22187159-PCA-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null SMAD4 ChEA Transcription Factor Targets 1.0 null Stevens-Johnson Syndrome CTD Gene-Disease Associations 1.0 1.07625 GTEX-PWOO-0326-SM-48TDB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20286 gland TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 SAP30_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Glucose Intolerance CTD Gene-Disease Associations 1.0 1.42454 Perturb_14022_KD_SPI1_SRP090090 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 7.12806 GTEX-U4B1-0126-SM-4DXSN GTEx Tissue Sample Gene Expression Profiles -1.0 -1.63181 Lung squamous cell carcinoma_LUSC_TCGA-33-4532-01A-01R-1201-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_CD4 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_11643_KD_KCNQ4_SRP113334 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.73486 cytoplasmic part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.378507 FOS_MCF 10A_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUND_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K23me2_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_12246_KD_EglN2_SRP325972 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 pallidal islands of Calleja Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.47046 TG(18:0/18:0/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H4K20me1_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null medial intermediate part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.846331 Splenomegaly CTD Gene-Disease Associations 1.0 1.04831 GTEX-O5YV-1126-SM-3LK73 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.872127 TG(20:5(5Z,8Z,11Z,14Z,17Z)/18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null respiratory epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.077541 H3K4me1_Colonic Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null rhombomere 11 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.98667 GTEX-TSE9-0008-SM-4DXT8 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.00624 GTEX-X5EB-0004-SM-46MWA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.20037 single-organism process GO Biological Process Annotations 2015 1.0 null mRNA_SMAD7_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-63-A5M9-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null layer 2 of RSC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.82492 CTCF_fibroblast of lung_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO 792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.935671 GTEX-XV7Q-2926-SM-4BRUL GTEx Tissue Sample Gene Expression Profiles 1.0 0.989297 GTEX-S32W-0726-SM-2XCBL GTEx Tissue Sample Gene Expression Profiles 1.0 1.05998 GTEX-UTHO-1026-SM-3GAF7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.10758 MAFK ENCODE Transcription Factor Targets 1.0 null glycerol-3-phosphate o-acyltransferase activity GO Molecular Function Annotations 2015 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-34-2596-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-XJ-A9DI-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary auditory cortex (core)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.884233 ZNF384_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B8-4619-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null central nervous system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.310421 acylglycerol biosynthetic process GO Biological Process Annotations 2015 1.0 null GTEX-SSA3-0002-SM-3P61R GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22799 TG(18:1(9Z)/18:2(9Z,12Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null mitochondrion LOCATE Predicted Protein Localization Annotations 1.0 null Hepatitis CTD Gene-Disease Associations 1.0 1.29317 anterior (rostral) cingulate (medial prefrontal) cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.939183 Perturb_15810_KD_Gnat1rd17_ERP131240 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.75746 Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.98633 Infralimbic area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.78218 H3K9ac_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Anorexia CTD Gene-Disease Associations 1.0 1.43401 Fever CTD Gene-Disease Associations 1.0 1.46041 female reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Paraventricular hypothalamic nucleus, magnocellular division, posterior magnocellular part, lateral zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.98802 GTEX-SJXC-0726-SM-2XCFJ GTEx Tissue Sample Gene Expression Profiles 1.0 0.952061 TG(18:1(9Z)/20:0/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null KARPAS-422 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.57973 COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.998164 caudal prosubiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.833463 mRNA_DLX3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null H3K4me3_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-38-4629-01A-02R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null raphe obscurus nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.921039 pyramidal layer of IG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04139 TG(18:1(9Z)/14:0/18:1(9Z))[iso3] HMDB Metabolites of Enzymes 1.0 null MOLM-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.856338 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7046-11A-01R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null arcuate nucleus of medulla, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.5846 TG(18:1(9Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso3] HMDB Metabolites of Enzymes 1.0 null abnormality of the male genitalia GWASdb SNP-Phenotype Associations 1.0 0.190753 H3K4me3_cardiac mesoderm_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null MAX_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-OXRL-2626-SM-2I3F1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.13037 H3K4me1_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HCC1187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.11699 GATA3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Entorhinal area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.08194 CTCF_GM12873_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null periventricular stratum of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.34567 Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3358-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CW-5587-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-QXCU-0326-SM-2TC63 GTEx Tissue Sample Gene Expression Profiles 1.0 0.938258 KMS-26 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.27932 POLR2AphosphoS5_PFSK-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_SK-N-SH_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mantle zone of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.70323 TG(18:0/20:0/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null Dorsal tegmental nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18663 overexpression GeneRIF Biological Term Annotations 1.0 null Perturb_4237_OE_ERG/FLI1_SRP403488 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -8.64525 human immunodeficiency virus infectious disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.323365 GTEX-P4PP-0005-SM-2HMKX GTEx Tissue Sample Gene Expression Profiles 1.0 1.00349 merozoite TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.77178 lamellar body COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.244962 Perturb_12992_KD_MAFB_SRP276044 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 3.72899 GTEX-XXEK-1426-SM-4BRW1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.05363 H3K4me1_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-VUSG-2626-SM-4KKZI GTEx Tissue Sample Gene Expression Profiles 1.0 1.13566 internal segment of globus pallidus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.978413 vero cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.236921 MAZ_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_fibroblast of gingiva_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null HIF1A_01_86 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 1.43513 Cerebellar Diseases CTD Gene-Disease Associations 1.0 1.07199 H3K4me1_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null 15467184-Table3a GeneSigDB Published Gene Signatures 1.0 null KMS-11 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.44977 hsa-miR-199a-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 TG(20:4(5Z,8Z,11Z,14Z)/18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.948077 lipid biosynthetic process GO Biological Process Annotations 2015 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5466-11A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18751 H3K4me3_cardiac mesoderm_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null EGR1 ENCODE Transcription Factor Targets 1.0 null hsa-miR-4668-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 H3K4me1_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null CUX1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_cardiac mesoderm_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null bcl11b_18199763_brain_lof_mouse_gpl1261_gds3178 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -1.21162 LPA(18:2(9Z,12Z)/0:0) HMDB Metabolites of Enzymes 1.0 null regulation of signal transduction GO Biological Process Annotations 2015 1.0 null TG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null periventricular stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35277 CTCF_MCF-7_hg19_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null intrinsic component of membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 Perturb_12058_KO_Stat5a/Stat5b_SRP012574 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 5.30316 DMRT1-23473982-TESTES-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null r11 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.4703 H3K27ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45W-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-TMZS-0001-SM-3P61Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.13109 amygdaloid complex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.47482 HUP-T3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.09184 Glutaconyl-CoA HMDB Metabolites of Enzymes 1.0 null Perturb_7478_KO_PTEN_SRP147969 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -13.3333 Prostate adenocarcinoma_PRAD_TCGA-G9-6338-01A-12R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H1435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.16478 H3K4me3_fibroblast of mammary gland_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_MEL cell line_mm9_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null MXI1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:1(11Z)/18:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null ChIP_SUZ12_18974828 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-QDVN-0426-SM-48TZ6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.33701 GTEX-T6MN-0011-R5A-SM-32QPD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.879082 H3K4me3_HCT116_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(16:0/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-X3Y1-0726-SM-3P5YU GTEx Tissue Sample Gene Expression Profiles -1.0 -1.52304 H2AFZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Glioblastoma CTD Gene-Disease Associations 1.0 1.02971 PK-45H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.47528 Glycerophospholipid biosynthesis Reactome Pathways 2014 1.0 null H3K27ac_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H4K20me1_myotube_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null hek-293 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.314772 HCC1395 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.35632 Octanoyl-CoA HMDB Metabolites of Enzymes 1.0 null u698 HPA Cell Line Gene Expression Profiles -1.0 -0.941387 hsa-miR-571 TargetScan Predicted Conserved microRNA Targets 1.0 0.997906 NFIC ENCODE Transcription Factor Targets 1.0 null H3K4me1_Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null r9 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16018 thyroid BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.18793 GTEX-TKQ1-0003-SM-3NMAE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.19027 Perturb_11967_OE_BATF_SRP401628 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 periventricular stratum of RtC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4299 GTEX-WEY5-1326-SM-3GILS GTEx Tissue Sample Gene Expression Profiles 1.0 0.854298 Perturb_3778_KD_JAK2_SRP041162 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 Blood Coagulation Disorders CTD Gene-Disease Associations 1.0 1.5555 endoplasmic reticulum membrane GO Cellular Component Annotations 2015 1.0 null GTEX-OHPK-0008-SM-4E3JL GTEx Tissue Sample Gene Expression Profiles -1.0 -1.01007 glycerophospholipid metabolic process GO Biological Process Annotations 2015 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-46-3768-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAX_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SW780 CCLE Cell Line Gene CNV Profiles -1.0 -2.86495 FURIN_Deficiency_GDS3512_568_mouse_T-cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null H3K9ac_Fetal Lung Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SW1573 CCLE Cell Line Gene CNV Profiles -1.0 -1.35391 TG(15:0/18:1(9Z)/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2IR-01A-11R-A180-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_14100_KO_ARID1A_SRP355686 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 15.0827 GTEX-T6MO-0726-SM-4DM58 GTEx Tissue Sample Gene Expression Profiles 1.0 0.864079 EBC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.41893 lung carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.13211 outer SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.855374 lysophospholipid acyltransferase activity GO Molecular Function Annotations 2015 1.0 null NTERA-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.11967 Perturb_15278_OE_Foxa1_SRP189075 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -9.01476 TG(16:0/16:1(9Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-S33H-1326-SM-4AD6A GTEx Tissue Sample Gene Expression Profiles -1.0 -0.917348 Cardiomyopathy, Hypertrophic CTD Gene-Disease Associations 1.0 1.02634 GTEX-REY6-0005-SM-2TF54 GTEx Tissue Sample Gene Expression Profiles 1.0 0.879892 mRNA_SFPI1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null 12460921-Table2 GeneSigDB Published Gene Signatures 1.0 null TBP_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:0/14:0/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_epithelial cell of esophagus_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_GM06990_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null septopallidal core nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10527 kidney TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null H3K4me3_fibroblast of pulmonary artery_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Perturb_10396_KD_MAFB_SRP352813 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -14.1252 Perturb_13134_KO_Pnpt1_SRP134850 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 9.46338 Central amygdalar nucleus, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32369 H3K4me3_kidney epithelial cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null mRNA_ESX1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null transferase activity, transferring acyl groups GO Molecular Function Annotations 2015 1.0 null CTCF_K562_hg19_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-XMD1-0011-R2B-SM-4AT5N GTEx Tissue Sample Gene Expression Profiles -1.0 -0.836009 GTEX-QVUS-0011-R4A-SM-3GAE7 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.876835 bronchoalveolar system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.065827 hsa-miR-98 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 CTCF_fibroblast of lung_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_10682_OE_hURI_SRP026667 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.84436 CEBPB_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QXCU-1726-SM-2TC6L GTEx Tissue Sample Gene Expression Profiles 1.0 0.984732 urinary tract TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.231206 Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A2LB-11A-11R-A18C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-R55G-0126-SM-48FDS GTEx Tissue Sample Gene Expression Profiles -1.0 -0.896891 reproductive organ cancer GWASdb SNP-Disease Associations 1.0 0.194692 hsa-miR-425 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 FOXP1_01_210 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 3.4042 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GR-A4D5-01A-11R-A31O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mediodorsal nucleus of thalamus_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.03611 internal female genital organ TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null 19139136-TableS3 GeneSigDB Published Gene Signatures 1.0 null Perturb_3391_KO_G6pd1_SRP305179 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.46233 H3K4me3_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null phosphorus metabolic process GO Biological Process Annotations 2015 1.0 null Respiratory Tract Infections CTD Gene-Disease Associations 1.0 1.0561 HNF4A_KD_GDS4798_550_human_HepG2 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GR-A4D9-01B-11R-A31O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_HeLa-S3_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-VUSG-0426-SM-3GIKD GTEx Tissue Sample Gene Expression Profiles 1.0 1.43993 GTEX-RM2N-0526-SM-2TF4N GTEx Tissue Sample Gene Expression Profiles 1.0 1.17371 Perturb_13679_KD_TFEB_SRP033784 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Perturb_5905_KD_ERH_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Ventricular Fibrillation CTD Gene-Disease Associations 1.0 1.03493 Bed nuclei of the stria terminalis, anterior division, fusiform nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.42898 TCF12 ENCODE Transcription Factor Targets 1.0 null pre-malignant neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.188632 superficial stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.79259 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5884-11A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_10891_OE_Trim24_SRP355273 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -6.76259 H2BK120ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null mantle zone of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76323 H3K9ac_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null capan2 HPA Cell Line Gene Expression Profiles 1.0 1.61522 Perturb_4400_KO_STING1_SRP191307 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 16.7385 Bradycardia CTD Gene-Disease Associations 1.0 1.02225 TG(18:1(9Z)/20:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Nucleus of the lateral lemniscus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.24556 H3K4me3_fibroblast of foreskin _hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_foreskin fibroblast_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null H3K27ac_CD4 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null small intestine HPA Tissue Protein Expression Profiles 1.0 0.776827 temporal pole, right, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.926328 GTEX-TSE9-2226-SM-4DXUR GTEx Tissue Sample Gene Expression Profiles 1.0 0.999799 H3K4me3_cardiac mesoderm_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SCC-25 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.10515 59M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.889992 BRCA1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4834-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_BJ_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Entorhinal area, lateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.22125 ARID3A ENCODE Transcription Factor Targets 1.0 null GTEX-W5X1-0001-SM-3P61V GTEx Tissue Sample Gene Expression Profiles -1.0 -1.31959 CTCF ENCODE Transcription Factor Targets 1.0 null Entorhinal area, lateral part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.73497 Agranular insular area, ventral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.024 urinary system TISSUES Experimental Tissue Protein Expression Evidence Scores 1.0 0.766457 intracellular membrane-bounded organelle LOCATE Curated Protein Localization Annotations 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2888-03B-01T-0748-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CEBPB_MCF-7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-V955-0126-SM-4JBH5 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.88215 18440302-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null H3K4me2_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null JUND ENCODE Transcription Factor Targets 1.0 null POLR2A_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null posteroventral (inferior) parietal cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.98993 SP1_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Learning Disorders CTD Gene-Disease Associations 1.0 1.69448 EZH2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_H1 Derived Mesenchymal Stem Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K27ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null disease by infectious agent DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.695103 TG(16:0/20:0/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null Perturb_11965_KO_IRF4_SRP401628 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -17.6596 DAUDI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.839918 H3K9ac_Stomach Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-XOTO-0526-SM-4B662 GTEx Tissue Sample Gene Expression Profiles 1.0 0.969028 H3K4me2_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XOTO-0008-SM-4GICE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.47059 HCC2270 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.865188 Perturb_5171_KO_Sirt1_SRP075247 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 SK-N-DZ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.53516 Lung squamous cell carcinoma_LUSC_TCGA-85-8070-01A-11R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Acute Kidney Injury CTD Gene-Disease Associations 1.0 2.01472 sensory system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.042231 white adipose tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.57042 r1 part of dorsal raphe nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2769 hippocampus BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.974644 Perireunensis nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.54631 estradiol_homo sapiens_gpl570_gse5102 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null TAL1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-QLQ7-0005-SM-2S1QP GTEx Tissue Sample Gene Expression Profiles 1.0 1.41613 TG(18:0/18:0/20:0)[iso3] HMDB Metabolites of Enzymes 1.0 null cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null POLR2A_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A770-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null urogenital system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.270561 Perturb_5897_KD_CCDC86_SRP271175 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -3.51851 TG(18:0/18:1(9Z)/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Perturb_11947_KO_IRF4_SRP096865 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 H3K4me1_Brain Cingulate Gyrus Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-S7SF-0006-SM-3K2B6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.6092 (2E)-Octenoyl-CoA HMDB Metabolites of Enzymes 1.0 null 18794137-SuppTable1c GeneSigDB Published Gene Signatures 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-7210-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Parasubiculum, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.49833 H3K4me3_cardiac mesoderm_hg19_6 ENCODE Histone Modification Site Profiles 1.0 null Nervous System Malformations CTD Gene-Disease Associations 1.0 1.27533 reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null GTEX-XGQ4-0926-SM-4AT4U GTEx Tissue Sample Gene Expression Profiles 1.0 1.52395 GTEX-R55C-0626-SM-2TF4Q GTEx Tissue Sample Gene Expression Profiles 1.0 0.881425 TG(16:1(9Z)/16:1(9Z)/20:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null KDM5A ENCODE Transcription Factor Targets 1.0 null PA-TU-8902 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881986 GTEX-RNOR-0826-SM-2TF5C GTEx Tissue Sample Gene Expression Profiles 1.0 0.836392 TG(18:2(9Z,12Z)/16:0/22:5(7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Perturb_2581_KD_AHR_SRP032510 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.83817 tail of caudate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.13139 membrane COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 H3K4me3_B cell_hg19_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-RVPU-0011-R7A-SM-2XCAB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.6028 Perturb_1686_OE_Mnx1_SRP373412 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 epithelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.054532 Bed nuclei of the stria terminalis, anterior division, anterolateral area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.65543 SJCRH30 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.36801 periventricular stratum of r2BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.33298 CEBPB ENCODE Transcription Factor Targets 1.0 null 5nM_dasatinib vs ctrl_K562 (Human) [19651622] SILAC Phosphoproteomics Signatures of Differentially Phosphorylated Proteins for Drugs -1.0 null GTEX-RWS6-1026-SM-47JXD GTEx Tissue Sample Gene Expression Profiles 1.0 1.32235 placenta_3a HPA Tissue Sample Gene Expression Profiles -1.0 -1.3647 H3K4me2_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K4me3_GM12875_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null mRNA_RHOX6_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null horizontal nucleus of the diagonal band Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04317 orbital frontal cortex_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.890183 ATF3_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Venous Thrombosis CTD Gene-Disease Associations 1.0 1.15089 GTEX-S95S-0005-SM-2XCEC GTEx Tissue Sample Gene Expression Profiles 1.0 0.973315 Triglyceride Biosynthesis Reactome Pathways 2014 1.0 null H3K4me1_Fetal Brain Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GTEX-SUCS-0526-SM-4DM56 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.30794 GTEX-T6MO-0326-SM-32QOK GTEx Tissue Sample Gene Expression Profiles 1.0 1.22286 Anterolateral visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16217 TG(18:1(9Z)/18:1(9Z)/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null HA-E2F1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_Duodenum Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-73-4676-01A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5984-11A-01R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GTEX-X585-0008-SM-46MU4 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.05138 SUZ12-16625203-MESC-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null H3K9ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null YY1_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MXI1 ENCODE Transcription Factor Targets 1.0 null H3K4me3_H1 Derived Neuronal Progenitor Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null thorax TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.055861 H2AFZ_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null retina BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.58293 H3ac_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-S4UY-0008-SM-3NM8H GTEx Tissue Sample Gene Expression Profiles -1.0 -1.09718 primary visual cortex (striate cortex, area V1/17)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.2564 H3K4me3_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_kidney epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null trans-Octadec-2-enoyl-CoA HMDB Metabolites of Enzymes 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2952-03B-01T-0760-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3427-01A-01R-0864-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:2(9Z,12Z)/16:0/18:3(9Z,12Z,15Z))[iso6] HMDB Metabolites of Enzymes 1.0 null NFIC_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null PANC 02.03 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.30487 SQ1 CCLE Cell Line Gene CNV Profiles 1.0 1.77259 Fetal Death CTD Gene-Disease Associations 1.0 1.49356 H3K4me3_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_3397_KO_Tcf7_SRP077563 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 10.1216 Respiratory Distress Syndrome, Adult CTD Gene-Disease Associations 1.0 1.06008 cortico-medial group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.857697 GTEX-QMR6-0011-R1A-SM-32PKW GTEx Tissue Sample Gene Expression Profiles -1.0 -1.6284 H3K4me3_CD34 Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null secretory granule COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.124399 bronchogenic carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.060644 mtordependent GeneRIF Biological Term Annotations 1.0 null TG(18:3(9Z,12Z,15Z)/18:3(9Z,12Z,15Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null H3K4me3_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NL4W-0011-R6a-SM-2I3GA GTEx Tissue Sample Gene Expression Profiles -1.0 -1.02034 lateral subdivision of BNST Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.22932 H3K4me1_K562_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Perturb_12000_KD_SPI1_SRP090090 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 Skin Neoplasms CTD Gene-Disease Associations 1.0 1.19014 JUND_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_CD4+ CD25- Th Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K27ac_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CTCF_GM12874_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WFJO-0008-SM-4LVN7 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.830363 Perturb_8380_KD_RPS3_SRP156425 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 9.96035 principal sensory nucleus of trigeminal nerve, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.972636 H3K9ac_Adipose Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null H3K27me3_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cytoplasm COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.663342 glycerophospholipid biosynthetic process GO Biological Process Annotations 2015 1.0 null hsa-miR-4727-5p TargetScan Predicted Conserved microRNA Targets 1.0 0.199275 periventricular stratum of p3ZL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.8079 molecular_function GO Molecular Function Annotations 2015 1.0 null Mammary Neoplasms, Animal CTD Gene-Disease Associations 1.0 1.06152 FOSL2_A549_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null lymphadenitis DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.270819 OVTOKO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.27111 H3K4me1_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HCFC1 ENCODE Transcription Factor Targets 1.0 null hsa-miR-2110 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 GTEX-OIZG-1326-SM-2HMIQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.08578 H3K4me3_Penis Foreskin Keratinocyte Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null TG(15:0/16:0/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null hsa-miR-23b TargetScan Predicted Conserved microRNA Targets 1.0 0.90397 mononuclear phagocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.216933 H3K27me3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:1(9Z)/18:1(9Z)/18:3(6Z,9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null shell of p3ZL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.80662 Perturb_14963_KO_Zfp30_ERP109794 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.38282 GTEX-XUJ4-0008-SM-4BOQI GTEx Tissue Sample Gene Expression Profiles -1.0 -1.31046 Drug Hypersensitivity CTD Gene-Disease Associations 1.0 1.08301 MFM-223 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.06589 brain HPA Tissue Gene Expression Profiles -1.0 -1.06199 KDM5B_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(16:0/16:0/18:0)[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-RU72-0011-R5A-SM-2TF6U GTEx Tissue Sample Gene Expression Profiles -1.0 -1.19846 EP300_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COV434 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.21865 hsa-miR-4670-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 BFTC905 CCLE Cell Line Gene CNV Profiles -1.0 -2.35707 Acute Myeloid Leukemia_LAML_TCGA-AB-2815-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:1(11Z)/14:0/18:1(11Z))[iso3] HMDB Metabolites of Enzymes 1.0 null medial parabrachial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.931921 intracellular organelle GO Cellular Component Annotations 2015 1.0 null POLR2A_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:2(9Z,12Z)/18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z))[iso6] HMDB Metabolites of Enzymes 1.0 null Syncope CTD Gene-Disease Associations 1.0 1.04201 CEBPB_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CEBPB_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-HZ-7289-01A-11R-2156-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXC2_01_236 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.61845 mediodorsal nucleus of thalamus_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.965468 TG(16:1(9Z)/18:0/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null NCI-H2452 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.840231 SG in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.33005 Lung adenocarcinoma_LUAD_TCGA-55-8089-01A-11R-2241-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TG(18:3(9Z,12Z,15Z)/18:0/18:3(9Z,12Z,15Z))[iso3] HMDB Metabolites of Enzymes 1.0 null GTEX-WFG8-0006-SM-3GIKS GTEx Tissue Sample Gene Expression Profiles 1.0 1.73352 lateral ganglionic eminence_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.90121 Mitochondrial Diseases CTD Gene-Disease Associations 1.0 1.01928 regulation of cell communication GO Biological Process Annotations 2015 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-4864-11A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOSL1_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Autoimmune Diseases CTD Gene-Disease Associations 1.0 1.169 cuneate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.16955 superficial stratum of p1B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.59831 lymphatic system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.074848 Hemorrhage CTD Gene-Disease Associations 1.0 1.94453 Insulin Resistance CTD Gene-Disease Associations 1.0 1.21271 AN3 CA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.09465 Posterolateral visual area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20342 EJM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.91019 GTEX-POYW-0826-SM-2XCEM GTEx Tissue Sample Gene Expression Profiles 1.0 1.28107 TG(18:1(9Z)/18:1(9Z)/18:2(9Z,12Z))[iso3] HMDB Metabolites of Enzymes 1.0 null SKLU1 CCLE Cell Line Gene Expression Profiles 1.0 1.42036 organelle GO Cellular Component Annotations 2015 1.0 null H3K9ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of m2ADL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05306 Perturb_787_KD_Irf3_SRP074478 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -3.42245 REST_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Entorhinal area, medial part, dorsal zone, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.28783 lung cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.073062 regulation of signaling GO Biological Process Annotations 2015 1.0 null suprachiasmatic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.64992 mediodorsal nucleus of thalamus_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.893515 OCI-AML3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.959374 G111 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.14124 H3K27me3_cardiac mesoderm_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GATA2 ChEA Transcription Factor Targets 1.0 null GTEX-RWSA-0826-SM-2XCBF GTEx Tissue Sample Gene Expression Profiles 1.0 1.4281 Prostate adenocarcinoma_PRAD_TCGA-G9-6366-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Carcinoma CTD Gene-Disease Associations 1.0 1.07022 TAF7L-23326641-C3H10T1-2-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-S7PM-0008-SM-3NM9Q GTEx Tissue Sample Gene Expression Profiles -1.0 -1.10808 GTEX-S4Q7-0006-SM-3K2AT GTEx Tissue Sample Gene Expression Profiles 1.0 1.27062 mantle zone of the IG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04092 H3K4me1_Neurosphere Cultured Cells Cortex Derived Roadmap Epigenomics Histone Modification Site Profiles 1.0 null PBX3_A549_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null hypoglossal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.13163 Pulmonary Edema CTD Gene-Disease Associations 1.0 1.49174 Submedial nucleus of the thalamus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.31975 H3K4me3_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TG(16:1(9Z)/20:0/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null implying GeneRIF Biological Term Annotations 1.0 null GTEX-Q734-2026-SM-3GADA GTEx Tissue Sample Gene Expression Profiles 1.0 0.854912 entorhinal cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.72234 RAD21_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UTHO-0008-SM-4JBID GTEx Tissue Sample Gene Expression Profiles -1.0 -0.925265 TG(16:0/16:0/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null K029AX CCLE Cell Line Gene CNV Profiles -1.0 -1.40146 endoplasmic reticulum COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.343421 ZKSCAN1_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Atrophy CTD Gene-Disease Associations 1.0 1.7045 PL45 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.894387 H3K79me2_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null CAPAN2 CCLE Cell Line Gene CNV Profiles 1.0 1.35836 Prostate adenocarcinoma_PRAD_TCGA-YL-A8HL-01A-11R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GATA1-19941826-K562-human ChEA Transcription Factor Binding Site Profiles 1.0 null LPA(16:0/0:0) HMDB Metabolites of Enzymes 1.0 null PK-59 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.00253 H3K4me2_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Perturb_15188_KD_BRG1/BRM_SRP056637 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 H3K27ac_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_fibroblast of lung_hg19_5 ENCODE Histone Modification Site Profiles 1.0 null TBL1XR1 ENCODE Transcription Factor Targets 1.0 null respiratory system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.269174 TG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/20:4(5Z,8Z,11Z,14Z))[iso3] HMDB Metabolites of Enzymes 1.0 null ZBTB7A_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7SE-0011-R1A-SM-2XCDE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.93169 GTEX-OHPN-0011-R1A-SM-2I5GB GTEx Tissue Sample Gene Expression Profiles -1.0 -1.25192 blast cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.144514 BHLHE40 ENCODE Transcription Factor Targets 1.0 null Jaundice CTD Gene-Disease Associations 1.0 1.33995 GTEX-XQ3S-1726-SM-4BOOD GTEx Tissue Sample Gene Expression Profiles -1.0 -0.967273 Pheochromocytoma and Paraganglioma_PCPG_TCGA-SP-A6QF-01A-12R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2A_cortical plate_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_erythroblast_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null smallintestine_4b HPA Tissue Sample Gene Expression Profiles 1.0 0.841954 Abnormalities, Drug-Induced CTD Gene-Disease Associations 1.0 1.83966 RAD21 ENCODE Transcription Factor Targets 1.0 null CTCF_GM12864_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null mRNA_OTX2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null TG(16:1(9Z)/18:2(9Z,12Z)/20:1(11Z))[iso6] HMDB Metabolites of Enzymes 1.0 null FOSL2 ENCODE Transcription Factor Targets 1.0 null spleen HPA Tissue Protein Expression Profiles -1.0 -1.14713 disease of cellular proliferation DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.247852 adipose tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.632335 NCI-H1648 COSMIC Cell Line Gene Mutation Profiles 1.0 null TGBC11TKB CCLE Cell Line Gene CNV Profiles -1.0 -1.80493 Bronchial Hyperreactivity CTD Gene-Disease Associations 1.0 1.20361 Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A13I-01A-11R-A13Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PPARA_agonist activation_GSE17250_475_mouse_Isolated hepatocytes GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null r6 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.81655 SU-DHL-10 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.04893 H3K4me3_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DS-A3LQ-01A-21R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null JUN_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-RM2N-0126-SM-48FDD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.28174 membrane-bounded vesicle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.078036 Perturb_147_KD_Zfp407_SRP051775 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 GTEX-QESD-1626-SM-2S1RB GTEx Tissue Sample Gene Expression Profiles 1.0 1.55744 Hypertension CTD Gene-Disease Associations 1.0 1.46986 JUND_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null interstitial nucleus of Cajal, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.28833 GTEX-TSE9-0011-R7A-SM-3DB7P GTEx Tissue Sample Gene Expression Profiles -1.0 -0.996643 H3K4me3_WI38_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null EBF1_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null organ system cancer GWASdb SNP-Disease Associations 1.0 0.058823 Perturb_14607_KO_SMAD4_SRP255626 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -10.0375 whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-85-8277-01A-11R-2296-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_Caco-2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2985-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Perturb_14597_KD_MYEOV_SRP242311 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 5.35247 membrane-bounded organelle LOCATE Curated Protein Localization Annotations 1.0 null H3K4me3_mammary epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HCC4017 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.02952 Perturb_423_KO_TAF15_SRP388817 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -7.92726 RNF2_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null endocrine gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SFPI1-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-R3RS-0726-SM-3GIJR GTEx Tissue Sample Gene Expression Profiles 1.0 1.55514 Perturb_16642_OE_Chmp2b_SRP238748 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.4062 POLR2AphosphoS5_Panc1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-OIZH-1326-SM-3NB1H GTEx Tissue Sample Gene Expression Profiles -1.0 -1.89454 NIH:OVCAR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.23256 HNF4alpha_DEPLETION_GDS4798_91_human_HepG2 hepatocellular carcinoma cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null KMS-12-BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.25057 HNF4A_KD_GSE29084_694_human_HepG2 cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Orbital area, medial part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34516 Death CTD Gene-Disease Associations 1.0 1.41368 EP300_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null doxorubicin_homo sapiens_gpl10558_gse42531 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-WFG7-0001-SM-3P61S GTEx Tissue Sample Gene Expression Profiles -1.0 -0.979837 Prostate adenocarcinoma_PRAD_TCGA-HC-7745-11A-01R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Primary somatosensory area, barrel field Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07152 Sarcoma_SARC_TCGA-FX-A2QS-11A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MKN-74 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.26825 HDAC6 ENCODE Transcription Factor Targets 1.0 null PPARG-19300518-3T3-L1 preadipocyte cells-mouse ChEA Transcription Factor Binding Site Profiles 1.0 null TG(22:5(7Z,10Z,13Z,16Z,19Z)/18:3(9Z,12Z,15Z)/22:5(7Z,10Z,13Z,16Z,19Z))[iso3] HMDB Metabolites of Enzymes 1.0 null BACH1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null salivarygland_6b HPA Tissue Sample Gene Expression Profiles -1.0 -0.906554 MYC_MCF 10A_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Retrosplenial area, ventral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.06512 Stearoyl-CoA HMDB Metabolites of Enzymes 1.0 null WIDR Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.54028 ELK1-22589737-MCF10A-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null POLR2A_A549_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null p1 part of the substantia nigra compacta Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07652 16166618-SuppTable3 GeneSigDB Published Gene Signatures 1.0 null GTEX-QCQG-0006-SM-2S1OW GTEx Tissue Sample Gene Expression Profiles 1.0 1.23588 NCI-H82 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.896151 NCIH1435 CCLE Cell Line Gene CNV Profiles 1.0 2.45853 TG(15:0/18:1(9Z)/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null H3K27ac_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null non-membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.051187 H3K4me3_GM12878_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_retinal pigment epithelial cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Prenatal Exposure Delayed Effects CTD Gene-Disease Associations 1.0 2.34559 TAF1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PK-45P Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-US-A776-01A-13R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Entorhinal area, lateral part, layer 2b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05794 hsa-miR-4797-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 Perturb_15771_KO_Nrl_SRP219918 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 14.0378 cerebellar cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.40073 Perturb_9765_KO_Ikbkb/Shp2_SRP285005 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 6.00591 layer 1 of RSC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20148 POLR2A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-8113-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null membrane region GO Cellular Component Annotations 2015 1.0 null H3K4me3_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.09538 E2F1 ENCODE Transcription Factor Targets 1.0 null hESC_Derived_CD56+_Ectoderm_Cultured_Cells Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -1.09644 GTEX-XUYS-0008-SM-47JYZ GTEx Tissue Sample Gene Expression Profiles -1.0 -1.21727 H3K9ac_fibroblast of lung_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.88577 Pentanoyl-CoA HMDB Metabolites of Enzymes 1.0 null Retrosplenial area, ventral part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.6935 mainolfactoryepithelium.MOE. BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.959223 GTEX-WK11-0926-SM-3NMAU GTEx Tissue Sample Gene Expression Profiles 1.0 1.29136 H3K4me3_H1 Derived Mesenchymal Stem Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null fibroblast cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.090968 cell COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.473215 TG(18:0/18:2(9Z,12Z)/20:0)[iso6] HMDB Metabolites of Enzymes 1.0 null H3K4me3_K562_hg19_4 ENCODE Histone Modification Site Profiles 1.0 null disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.192971 MAX_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TG(18:3(9Z,12Z,15Z)/16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))[iso6] HMDB Metabolites of Enzymes 1.0 null integral component of membrane GO Cellular Component Annotations 2015 1.0 null HGC-27 COSMIC Cell Line Gene Mutation Profiles 1.0 null pontine nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.55513 macromolecular complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.041187 H3K79me2_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XOT4-0008-SM-4B664 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.986413 CEBPB_HCT116_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-UTHO-0011-R5A-SM-3GIJD GTEx Tissue Sample Gene Expression Profiles -1.0 -1.48916 H3K27me3_CD14-positive monocyte_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-N7MT-0011-R6a-SM-2I3G3 GTEx Tissue Sample Gene Expression Profiles -1.0 -0.886827 Confusion CTD Gene-Disease Associations 1.0 1.20064 TG(18:0/18:1(9Z)/20:4(5Z,8Z,11Z,14Z))[iso6] HMDB Metabolites of Enzymes 1.0 null GTEX-UPJH-0001-SM-3NMDE GTEx Tissue Sample Gene Expression Profiles -1.0 -1.22079 H3K9ac_keratinocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.13738 midbrain reticular formation Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.36125 Ovarian Diseases CTD Gene-Disease Associations 1.0 1.3556 CHD7_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NAMALWA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.00877 SUZ12-20075857-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null PATU8902 CCLE Cell Line Gene CNV Profiles -1.0 -1.3646 skeletal muscle HPA Tissue Protein Expression Profiles -1.0 -1.14713 EKVX CCLE Cell Line Gene CNV Profiles 1.0 1.42643 MYC_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-Q2AG-0011-R9A-SM-2HMJ6 GTEx Tissue Sample Gene Expression Profiles -1.0 -1.11535 CTCF_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null MXI1_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Neurosphere_Cultured_Cells_Cortex_Derived Roadmap Epigenomics Cell and Tissue Gene Expression Profiles -1.0 -1.44271 GTEX-WH7G-1126-SM-3NMBK GTEx Tissue Sample Gene Expression Profiles 1.0 1.54831 GTEX-X4XY-0011-R8A-SM-46MVC GTEx Tissue Sample Gene Expression Profiles -1.0 -0.928841 GTEX-X4LF-0006-SM-3NMCO GTEx Tissue Sample Gene Expression Profiles 1.0 0.898716 H3K4me3_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me3_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-W5X1-0426-SM-3GILB GTEx Tissue Sample Gene Expression Profiles 1.0 0.928736 Asthma CTD Gene-Disease Associations 1.0 1.38242 primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.5894 H3K4me3_B cell_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7406-11A-01R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_9563_KO_Ogt_SRP110508 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.48789 HDAC6_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9me3_fibroblast of lung_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null pontine nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.55639 TG(16:0/18:1(9Z)/18:2(9Z,12Z))[iso6] HMDB Metabolites of Enzymes 1.0 null