association	dataset	threshold value	standardized value
Progression Of Non-Small Cell Lung Cancer	DisGeNET Gene-Disease Associations	1.0	null
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.139
BRD-K56149020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.96796
BRD-K89837874	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.89154
VZ in posterosuperior (dorsal) parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.15132
Spindle pole body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.311
abnormal response to infection	MPO Gene-Phenotype Associations	1.0	null
extracellular region part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041277
BRD-K09499853_KU 0060648 trihydrochloride_RMUGS_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K53110645	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23353
Primary visual area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23003
Respiratory mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.05
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.8534
BRD-K19036695	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.21951
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.1946
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
Bed nuclei of the stria terminalis, anterior division, anterolateral area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0333
Nasal polyp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.219
Pulmonary vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.72
POGLUT2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00544671
BRD-K52163391_NCGC00165208-01_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Field CA1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10683
EPHA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00714512
BRD-K64052750_gefitinib_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
layer III of rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.49881
regulation of sodium ion transport	GO Biological Process Annotations 2025	1.0	null
KM-12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46888
SG in ventrolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.20896
BRD-K25465939	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17763
Apical complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.023
Cancer Of Nasopharynx	DisGeNET Gene-Disease Associations	1.0	null
Prelimbic area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.31133
Airway Disease	DisGeNET Gene-Disease Associations	1.0	null
CRCGN009_HEPG2_24H:N03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.06571
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.245
nasopharyngeal	GeneRIF Biological Term Annotations	1.0	null
PMC3804941-supp_jem.20122709_JEM_20122709_TableS1.xlsx-Suppl_Table_1C-1772_genes-Table_S1_C_1_772_significantly_overexpressed_genes_during_AR_when_combining_p-values_at_FDR_20_AR	Rummagene Transcription Factor Associations 2026	1.0	null
sweat gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.192854
BRD-K78431006_crizotinib_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DNMT3L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00436737
BRD-K87433679	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27721
FHL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00664684
BRD-K20435953	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4848
PMC7021771-41467_2020_14684_MOESM7_ESM.xlsx-CASZ1_ChIPseq_in_SMS-CTR_MEKi-Nearest_Ensembl_CASZ1	Rummagene Transcription Factor Associations 2026	1.0	null
ANKRD11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00557041
Pharyngeal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.624
Shell gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.974
lateral preoptic nucleus, PO2 part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.43053
NCI-H292 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.515
SNU81	CCLE Cell Line Gene Expression Profiles	-1.0	-1.82955
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.29781
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.984
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	53.073
Atf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.8629
BRD-K88378636_withaferin-a_HME1_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
bronchus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.247719
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.02783
there	GeneRIF Biological Term Annotations	1.0	null
Lung adenocarcinoma_LUAD_TCGA-05-4420-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MRPL16	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00659564
BRD-K45713337	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02601
ermes complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.26445
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.64327
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6535
promethazine-6477	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5235
capacity	GeneRIF Biological Term Annotations	1.0	null
posterior triangular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.69566
BRD-K74056311	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60646
GSE153757,GSE153758_1_v_3_ftsj1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5621
MFSD2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0074487
changes	GeneRIF Biological Term Annotations	1.0	null
POLB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0062073
mantle zone of AStr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26014
most	GeneRIF Biological Term Annotations	1.0	null
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
Gingival fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.245
turn	GeneRIF Biological Term Annotations	1.0	null
BRD-K05561348	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07099
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4817-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
lung	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.868511
klf4_17017123_rko_gof_human_gpl96_gds1942	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.289749
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892794
gastrointestinal stromal tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.171785
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892794
TBC1D7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00588385
Field CA2, stratum oriens	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12398
proliferation	GeneRIF Biological Term Annotations	1.0	null
BRD-K37865854	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0342
superficial stratum of r2Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10503
BRD-K20028734	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.33141
terminal bronchiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.437205
striatum_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.973744
GP5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00505222
WAOSEL	DepMap CRISPR Gene Dependency	1.0	10.2885
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.6048
vomeralnasalorgan.VMO.	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.959225
Motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.13
BRD-K88485670	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08786
CA5B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00626866
GSE174701_5_v_8_maml3_human	RummaGEO Gene Perturbation Signatures	1.0	null
RBPJ-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Pharyngeal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.74
Supraoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14377
BRD-A71765365_Reserpine_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Liver Cirrhosis	CTD Gene-Disease Associations	1.0	1.03493
retina	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.12588
superficial stratum of THyB-D	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.68906
primary visual cortex (striate cortex, area V1/17)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.32399
Kidney Chromophobe_KICH_TCGA-KM-8442-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Epithelial stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.784
BRD-A35869383_ibrutinib_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SkeletalMuscle	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.869571
bacterial	GeneRIF Biological Term Annotations	1.0	null
BRD-K36493118	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07571
Anterolateral visual area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.18781
Lung squamous cell carcinoma_LUSC_TCGA-39-5029-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LS	DepMap CRISPR Gene Dependency	1.0	2.16499
BRD-K50859531	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.52223
significant	GeneRIF Biological Term Annotations	1.0	null
SPTLC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00663731
hsa-miR-4726-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
LSR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00431986
inner CP in rostral cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.903396
OVKATE	COSMIC Cell Line Gene Mutation Profiles	1.0	null
differentially	GeneRIF Biological Term Annotations	1.0	null
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.4539
CD34	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00514918
MICALL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0047549
interleukin-4 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.646
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1606
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24651
HEL9217	CCLE Cell Line Gene CNV Profiles	1.0	1.4222
BRD-K58041870	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.3274
Mucoepidermoid carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.255
layer V of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0201
BRD-A62184259_Cycloheximide_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.107
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.4815
preoptic area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.17109
fetal alcohol syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.477909
SNU449	DepMap CRISPR Gene Dependency	1.0	2.62557
BRD-K12184916_-666_THP1_6.0_h_0.63_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Posterior parietal association areas	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.35924
Vaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.248
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.55785
BRD-A45498368_WYE-125132_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.28098
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2681
parvocellular part of the r9LRt	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.74949
BRD-A34774643	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25748
Lung-respiratory mucous cell	Tabula Sapiens Gene-Cell Associations	1.0	0.13451
LN235	CCLE Cell Line Gene Expression Profiles	-1.0	-1.86034
SB-228357	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19319
major	GeneRIF Biological Term Annotations	1.0	null
PMC9302041-DataSheet_1.docx-0-BACH2_BACH2	Rummagene Transcription Factor Associations 2026	1.0	null
NPR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0054523
Nasal cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.997
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4887-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ear	GeneRIF Biological Term Annotations	1.0	null
NCI-H1650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41343
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892794
dorsomedial preoptic area, superficial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.33437
BRD-K55510118	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44106
PMC3644282-1471-2164-14-110-S3.xls-Contextual_Gene_Set_Ref_Can-SIX3_SIX3	Rummagene Transcription Factor Associations 2026	1.0	null
ATP5F1C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00431414
NO-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
polysensory temporal cortex (area 22p)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.849346
Neoplasms	CTD Gene-Disease Associations	1.0	1.17399
Pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.248
MAPK1IP1L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00542961
Nasal lavage fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.318
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.33184
Posterior complex of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.01865
thereby	GeneRIF Biological Term Annotations	1.0	null
PMC9396374-Table_4.XLSX-AR_related_genes_from_GeneCards-gene_symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GSE217071_3_v_0_ythdf2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
SLR26	DepMap CRISPR Gene Dependency	1.0	2.89714
KLM1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.46227
BRD-A03898562	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0018
23132-87	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Heart Diseases	CTD Gene-Disease Associations	1.0	1.05461
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892794
pharynx	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
clinical	GeneRIF Biological Term Annotations	1.0	null
BRD-K49865102_PD-0325901_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K34787855	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54131
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3226
increased interleukin-1 alpha secretion	MPO Gene-Phenotype Associations	1.0	null
YH13	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38661
RARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4783
Field CA1, stratum radiatum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08479
oocytes	GeneRIF Biological Term Annotations	1.0	null
BRD-K36198653	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.39389
BRD-A19037878_trichostatin A_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K32269272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22986
PMC4521181-oncsis201520x8.pdf-29-TBX18_TBX18	Rummagene Transcription Factor Associations 2026	1.0	null
NCKAP1L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00729281
infection	GeneRIF Biological Term Annotations	1.0	null
BRD-K57537921	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05112
Posterior pharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.16
PMS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00615582
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.1241
Poisoning	CTD Gene-Disease Associations	1.0	1.06625
BRD-K48803730_-666_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.4502
CRCGN015_MCF10A.WT.HP_24H:A16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.33739
BRD-K71210410	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.03442
SK-N-DZ	Sanger Dependency Map Cancer Cell Line Proteomics	-1.0	-2.91848
NCI-H2196	GDSC Cell Line Gene Expression Profiles	1.0	1.64241
three	GeneRIF Biological Term Annotations	1.0	null
palate	GeneRIF Biological Term Annotations	1.0	null
interleukin-5 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.643
nucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.099829
mantle zone of THyB-P	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1261
BRD-K02113016_olaparib_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00351
BRD-K70792160_Akt inhibitor X_HT29_24.0_h_24.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EPN2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00440921
NOL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.9248
BANK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00700613
BRD-K50000283_PHA-767491_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
posterior (caudal) superior temporal cortex (area 22c)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.56048
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.67122
MOLT4	BioGPS Cell Line Gene Expression Profiles	1.0	1.271
organelle outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.113737
BRD-K34456337	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54943
GSE145215_0_v_1_krt13_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
purification	GeneRIF Biological Term Annotations	1.0	null
OAS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00739074
NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.1888
epithelia	GeneRIF Biological Term Annotations	1.0	null
abnormal interleukin-1 secretion	MPO Gene-Phenotype Associations	1.0	null
Clara cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.844
Type IV pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.303
NDFIP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00496391
CRCGN014_HEPG2_24H:M15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.17199
EPHA10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00850729
BRD-K15290974	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18509
KU812	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32409
MECP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00465726
BRD-K55852567	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17461
Tympanum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.836
BRD-A61304759_tanespimycin_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Palatine tonsil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.881
Motor nucleus of trigeminal	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.3636
MRTO4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00624688
Upper respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.362
BRD-K59709341	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.64714
BRD-K44894536	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06494
salivary gland adenoid cystic carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.282225
BRD-U64521890_XMD16-144_HS578T_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NDUFB8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00491805
humoral immune response	GO Biological Process Annotations 2015	1.0	null
BRD-K81220870	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12079
lung	GTEx Tissue Gene Expression Profiles	1.0	1.49709
Alveolar macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.565
BRD-K73149920	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1985
Primary somatosensory area, unassigned, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.52368
DBTRG05MG	CCLE Cell Line Gene Expression Profiles	-1.0	-1.5343
19658189-TableS3	GeneSigDB Published Gene Signatures	1.0	null
molecular	GeneRIF Biological Term Annotations	1.0	null
BRD-A75144621_digoxin_VCAP_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kco	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.553
Perturb_13387_OE_p73_SRP069085	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
pathological	GeneRIF Biological Term Annotations	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02469
NKX3-1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00692946
BRD-K36363294_I-BET151_PC3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.005
BRD-K52340217	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14821
Gastric Hepatoid Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
Nitrate reductase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.704
SARS-CoV_84Hour_23935999_GSE47960	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.66218
multicellular organismal-level water homeostasis	GO Biological Process Annotations 2025	1.0	null
xenopus	GeneRIF Biological Term Annotations	1.0	null
BRD-K99964838_bosutinib_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IgA immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.629
MCAS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ITPKB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00707998
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
procainamide-2618	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K75529374	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13891
LXF289	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75883
airway	GeneRIF Biological Term Annotations	1.0	null
less	GeneRIF Biological Term Annotations	1.0	null
BRD-K12396271	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38175
Creb3l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.2598
BRD-K70923850	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10365
BRD-K16526787	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3021
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.2373
stratum radiatum of rostral CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.982601
Primary somatosensory area, trunk, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.49978
bronchiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.296013
BRD-A03997826	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2703
abnormal interleukin secretion	MPO Gene-Phenotype Associations	1.0	null
Nkx3-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.2923
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.862
BRD-K10590495	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.97928
Lung adenocarcinoma_LUAD_TCGA-05-4390-01A-02R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inflammation	GeneRIF Biological Term Annotations	1.0	null
BRD-K81709173_Halcinonide_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GPR61	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00769259
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.665
CRCGN017_MCF10A.TP53.M_24H:E13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.11105
Mucoepidermoid carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.475
HTT-18923047-STHdh-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
Lung Injury	CTD Gene-Disease Associations	1.0	1.32935
cystic fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.452208
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.1469
central nucleus of inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.71717
ZFHX3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00579573
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.9879
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892794
GSE164529_0_v_2_tamoxifen_human	RummaGEO Drug Perturbation Signatures	1.0	null
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.68992
SW1271	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
BRD-K40474424	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.74047
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7392
idiopathic pulmonary fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.483985
response to stimulus	GO Biological Process Annotations 2015	1.0	null
Primary somatosensory area, upper limb, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.37353
soluble	GeneRIF Biological Term Annotations	1.0	null
submucosal gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.39238
Outer ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.967
Vaginal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.774
NDUFA9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00789205
BRD-K12994359_Valdecoxib_LOVO_6.0_h_177.6_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
paraterete nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26786
pleomorphic adenoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.60893
NME7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00775116
trachea	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
MDAMB361	DepMap CRISPR Gene Dependency	1.0	2.64207
villus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.545342
KDELR3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00697713
PMC9181267-mmc5.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-hsapiens_homolog_associated_gene_name_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6955-11A-01R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
while	GeneRIF Biological Term Annotations	1.0	null
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.752884
BRD-K72379955	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28308
defense response to virus	GO Biological Process Annotations 2025	1.0	null
NPHS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00627772
Breast - Mammary Tissue	GTEx Tissue Gene Expression Profiles 2023	1.0	4.80265
NCIH508	CCLE Cell Line Gene CNV Profiles	1.0	1.33291
abnormal immune system physiology	MPO Gene-Phenotype Associations	1.0	null
Basolateral amygdalar nucleus, anterior part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.17817
BRD-K89232006	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.65051
homeostasis	GeneRIF Biological Term Annotations	1.0	null
BRD-K16621460	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38712
TEX14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00502745
BRD-K68300789	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.85127
BRD-K41033271	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25987
SZ in midcingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.12391
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10273
BRD-K20271299	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09535
layer VI of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.11182
mucosa	GeneRIF Biological Term Annotations	1.0	null
FZD10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00514271
Brain Lower Grade Glioma_LGG_TCGA-DB-A4XA-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7007
npc	GeneRIF Biological Term Annotations	1.0	null
BRD-K58193973	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22169
CRCGN016_MCF10A.TP53.M_24H:A17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.62873
cerebellar cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.09382
lung inflammation	MGI Mouse Phenotype Associations 2023	1.0	null
Meibomian gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.867
properties	GeneRIF Biological Term Annotations	1.0	null
Primary somatosensory area, lower limb, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.44133
sirolimus_mus musculus_gpl1261_gse21755	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K64317740	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44421
CRCGN015_MCF10A.TP53.M_24H:H22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.27325
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.1287
blood	GeneRIF Biological Term Annotations	1.0	null
saliva	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.29759
NCIH2126	DepMap CRISPR Gene Dependency	1.0	2.68621
BRD-K04336022	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14093
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.7697
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.063
Rhinitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.863
LB1047-RCC	GDSC Cell Line Gene Expression Profiles	-1.0	-2.35056
hsa-miR-4640-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.049924
Mucoepidermoid Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
GSE193993_0_v_6_sstr2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
intermediate stratum of SeStr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19255
sinus	GeneRIF Biological Term Annotations	1.0	null
Alveolar wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.554
CRCGN015_MCF10A.TP53.M_24H:F01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.07091
submandibular gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.33413
BRD-K63504496	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29881
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.1
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7388
Trachea	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	2.2603
ATP1A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0036376
defences	GeneRIF Biological Term Annotations	1.0	null
GLYATL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00483514
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.6574
CSNK1G1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00569931
Submandibular gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.667
septum (resp epith)	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.14276
Lung epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.697
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4972
BRD-K70735803	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25338
OAW42	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41308
MED12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00335019
primary somatosensory cortex (area S1, areas 3,1,2)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.955924
DU145	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45763
BRD-K19540840_saracatinib_SKBR3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.126
BL2787 (PSMC5)	NURSA Protein Complexes	1.0	null
AIF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00736915
Lung squamous cell carcinoma_LUSC_TCGA-22-5479-01A-31R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Tongue epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.721
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063844
BRD-K74632893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15699
TCF7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00542882
RERFGC1B	DepMap CRISPR Gene Dependency	1.0	3.94146
interfere	GeneRIF Biological Term Annotations	1.0	null
BRD-K93176491	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18535
Pulmonary Cystic Fibrosis	DisGeNET Gene-Disease Associations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-85-7697-01A-11R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K81669067	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20734
PMC6397348__F9	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K21025364_NVP-TAE226_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CAV2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00606372
mediated	GeneRIF Biological Term Annotations	1.0	null
NCIH1618	CCLE Cell Line Gene Expression Profiles	1.0	2.04755
Skin Cutaneous Melanoma_SKCM_TCGA-BF-A1PU-01A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K61595867	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.12377
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3371
KANK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00524606
regulation of liquid surface tension	GO Biological Process Annotations 2015	1.0	null
CRCGN017_MCF10A.WT.HP_24H:A16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.7277
response to other organism	GO Biological Process Annotations 2015	1.0	null
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892794
vertebrate muscular system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
nucleus of the inferior collicular brachium, caudal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.31128
PMC8528285-pbio.3001085.s010.xlsx-Fig_S8A-MLX_3T3_MLX	Rummagene Transcription Factor Associations 2026	1.0	null
PMC9396374-Table_4.XLSX-AR_related_target_genes-gene_symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GSE239844_6_v_0_crizotinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.36261
substantia innominata/basal nucleus, transitional part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04899
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.539667
hsa-miR-15b	TargetScan Predicted Conserved microRNA Targets	1.0	0.49473
BRD-K16247913	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34336
STARD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00587551
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Airway fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.566
Columnar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.313
OCUG1	DepMap CRISPR Gene Dependency	1.0	2.40635
Fetal Death	CTD Gene-Disease Associations	1.0	1.44382
CRCGN016_MCF10A.WT.HP_24H:P11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.9882
Mesothelioma_MESO_TCGA-SH-A7BH-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE124375_13_v_0_chd2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K70642949_GSK-2334470_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
lung	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
BRD-K01976263_Emetine Dihydrochloride Hydrate (74)_CORL23_6.0_h_0.63_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K27384243	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02791
BPIFB1	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K22778609	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.00518
PMC4831838__F4	PFOCR Pathway Figure Associations 2024	1.0	null
PPP4R2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00557471
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47617
molecular_function	GO Molecular Function Annotations 2015	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069004
COLO775	CCLE Cell Line Gene Expression Profiles	-1.0	-1.5814
monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048164
Lung non-small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.896
Palatine uvula	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.684
review	GeneRIF Biological Term Annotations	1.0	null
SW 1990	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52044
downexpressed	GeneRIF Biological Term Annotations	1.0	null
BRD-K91655763	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.79835
rnf2_21051595_92dot1_lof_human_gpl10558_gse24896	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.60161
Oligospermia	CTD Gene-Disease Associations	1.0	1.22916
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FA-A6HO-01A-11R-A31O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH146	CCLE Cell Line Gene CNV Profiles	1.0	1.64646
basic	GeneRIF Biological Term Annotations	1.0	null
defense response to virus	GO Biological Process Annotations 2023	1.0	null
PMC11982601-IMM-175-84-s005.xlsx-Fig5D_LPS-Innate_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K39460811	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.57179
BRD-A75144621_digoxin_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CRCGN017_MCF10A.WT.HP_24H:O08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0599
S117	CCLE Cell Line Gene Expression Profiles	1.0	1.92522
IL17RC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00518997
hsa-miR-1275	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
PMC9181267-mmc3.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-hsapiens_homolog_ensembl_gene_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-98-A53H-01A-12R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K19245310	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.92192
ICAM4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00655623
BRD-K24984327	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04906
surgeries	GeneRIF Biological Term Annotations	1.0	null
GSE116354,GSE117379_2_v_4_cox2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
barr	GeneRIF Biological Term Annotations	1.0	null
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.055
DUSP4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00400231
Oral epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.863
inverted papilloma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.67312
normal	GeneRIF Biological Term Annotations	1.0	null
BRD-K76251351	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43082
insight	GeneRIF Biological Term Annotations	1.0	null
BRD-K34405227	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.01062
BHY	CCLE Cell Line Gene CNV Profiles	1.0	2.0654
r10 part of the inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.03702
GSE151160_0_v_1_cd36_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K05586628	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32035
BRD-K03421365	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10799
H3K27me3_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K67075780_TGX-115_THP1_6.0_h_160.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.386273
HAL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00803459
BRD-K72519034	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.62677
SLC6A8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00708383
involvement	GeneRIF Biological Term Annotations	1.0	null
Tooth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.089
water homeostasis	GO Biological Process Annotations 2015	1.0	null
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.829274
CRCGN013_HEPG2_24H:K03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.00157
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.82
KAT2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00464277
BRD-K79090631_CGP-60474_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Primary Malignant Neoplasm Of Lung	DisGeNET Gene-Disease Associations	1.0	null
IL12B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00611191
BRD-K14117311	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.67993
biofilm	GeneRIF Biological Term Annotations	1.0	null
BRD-K49584388	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07766
BRD-A75144621_digoxin_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.8062
Hypereosinophilic syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.359
respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.981373
CTSL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00578399
rostral paraventricular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.61378
CRCGN015_HEPG2_48H:A13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.48285
Rhinitis, Allergic, Seasonal	HuGE Navigator Gene-Phenotype Associations	1.0	null
ADCY3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00421348
BL2254 (PRKRIR)	NURSA Protein Complexes	1.0	null
CRCGN017_MCF10A.WT.HP_24H:K10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.75185
BRD-K03304013	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15823
BRD-K34004579	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50653
BRD-K43389698_BMS-387032_BT20_3_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
enacin	GeneRIF Biological Term Annotations	1.0	null
BRD-U61997977_WZ-4-145_SKBR3_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Primary somatosensory area, trunk, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.07358
primary visual cortex (striate cortex, area V1/17)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.8576
BRD-U61997977_WZ-4-145_SKBR3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
outer CP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.92846
SLC19A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00491848
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.1613
SW1417	CCLE Cell Line Gene CNV Profiles	1.0	1.86682
BRD-A25170757_1-(4,5-bis(benzyloxy)-2-fluorophenyl)-2-(methylamino)ethanol KLK-33_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HDC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00609749
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.208
negative regulation of biological process	GO Biological Process Annotations 2015	1.0	null
BRD-K30214445	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.87617
BRD-A93236127_-666_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K10862230	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31271
Glaucoma_Retina_GSE3554	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.91004
antivirus	GeneRIF Biological Term Annotations	1.0	null
Orbital area, medial part, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16429
laevis	GeneRIF Biological Term Annotations	1.0	null
FGG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00740165
BRD-K20733942	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09328
Salivary gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.175
BRD-A19500257_geldanamycin_HT29_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-7815-01A-11R-2170-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
oncogenicity	GeneRIF Biological Term Annotations	1.0	null
Hand1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.6704
BRD-K23875128_Rho kinase inhibitor III [rockout]_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K01877528_TL_HRAS26_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SP in ventromedial extrastriate cortex (VP)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.925198
GSU	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34311
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00351
BRD-K06492185	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.4598
posteroventral (inferior) parietal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.24843
BRD-K87909389_alvocidib_HA1E_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ATAD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0049091
immune response in nasopharyngeal-associated lymphoid tissue	GO Biological Process Annotations 2023	1.0	null
NBN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00843258
MYO5A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0067994
Anterior olfactory nucleus, posteroventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.32039
serous cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.17624
defense response to bacterium	GO Biological Process Annotations 2015	1.0	null
CCNC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00899106
BRD-K02529187	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51571
Perturb_14214_KO_App_SRP254653	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	4.21953
BRD-K82102697	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19908
PMC9396374-Table_5.XLSX-Table_S5-AR_genes_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Anthracosis	DisGeNET Gene-Disease Associations	1.0	null
Perturb_11852_OE_Ccne1_SRP185695	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-1.44331
SG in primary somatosensory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.1008
CST7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00490983
laterorostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.860092
physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.107368
BRD-K18087940	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0087
propafenone-1722	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
multicellular organismal-level water homeostasis	GO Biological Process Annotations 2023	1.0	null
SCRT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4731
VPS13B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00623972
BRD-K50168500_canertinib_SKBR3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K42138859	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09882
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4965-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GPR157	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.007107
Calprotectin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.688
SARS-CoV_24Hour_23935999_GSE47962	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.91162
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MH-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-A63590986	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05548
trachea	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.64768
BRD-K79259477_KIN001-265_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12306
H3K27me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE183890_7_v_10_ifitm3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Calcitonin family receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.03
MZ in posteroventral (inferior) parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.21432
HS766T	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041501
CRCGN017_MCF10A.TP53.M_24H:A17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.41877
layer II of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.846428
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.062095
Nasal Polyps	DisGeNET Gene-Disease Associations	1.0	null
orbital frontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.03661
regulation of sodium ion transport	GO Biological Process Annotations 2023	1.0	null
salivary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02732
GSE188721_3_v_1_mesp1_human	RummaGEO Gene Perturbation Signatures	1.0	null
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
BDKRB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00647049
MALME 3M	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.999124
SCC-3	GDSC Cell Line Gene Expression Profiles	1.0	2.34669
Edema	CTD Gene-Disease Associations	1.0	1.2772
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.244
FUS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00554571
CMK86	CCLE Cell Line Gene Expression Profiles	-1.0	-1.68064
BRD-K78603273	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.6147
BRD-K26383086	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.83308
PSMC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10003
BRD-K81418486_vorinostat_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
defense response	GO Biological Process Annotations 2015	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.22645
stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.365633
BRD-K65875972	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04395
mantle zone of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72041
SOX10	JASPAR Predicted Transcription Factor Targets	1.0	null
mouth	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
BRD-K80819226	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01472
hsa-miR-4677-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.90397
whose	GeneRIF Biological Term Annotations	1.0	null
CDKAL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00409163
BRD-K13445266	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3424
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5456-11A-02R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-64-5774-01A-01R-1628-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-6971-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HAC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.228
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.5522
GJA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00484775
BRD-K03440991	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.02281
BRD-K86867503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2814
chronic obstructive pulmonary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.213959
BRD-K79090631_CGP-60474_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CRCGN014_HEPG2_24H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.5842
Salivary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.187
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044427
CRCGN017_MCF10A.WT.HP_24H:A14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.5192
BRD-K19687926_lapatinib_SKBR3_3_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Sputum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.042
MYBPHL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00610291
E2F1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00880693
BRD-K21620541	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0044
perform	GeneRIF Biological Term Annotations	1.0	null
BRD-K85402309_dovitinib_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K30298864	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00326
Oral mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.319
PMC11686977-12967_2024_5960_MOESM9_ESM.xlsx-Sheet1-Supplementary_Table_4_The_co-precipitated_proteins_of_the_four_RORA_promoter_probes_P1_P2_P3_and_P4_and_beads_RORA	Rummagene Transcription Factor Associations 2026	1.0	null
Ammon's horn	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0023
VZ in caudal hippocampal proper	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.857297
bacterium	GeneRIF Biological Term Annotations	1.0	null
BRD-K99749624_linifanib_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
internal iliac artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.688817
risk	GeneRIF Biological Term Annotations	1.0	null
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17792
BRD-K39915878_Loxapine succinate_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
BRD-K19220233_JNK-9L_HME1_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K27me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-3185	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
Brain Lower Grade Glioma_LGG_TCGA-FG-8185-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3772
COX6A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00425966
BRD-K83218047	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54746
SHSYSY-RA	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.38909
BRD-K28924192	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05234
Lung squamous cell carcinoma_LUSC_TCGA-85-8049-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K06765193_5663823_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
parietal cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72429
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.4228
Partial Fetal Alcohol Syndrome	DisGeNET Gene-Disease Associations	1.0	null
BRD-K01436366_-666_SKB_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MZ in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.33135
first	GeneRIF Biological Term Annotations	1.0	null
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55327
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.055276
oviduct	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.471927
Primary somatosensory area, lower limb, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.65008
PXYLP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00499113
multifunctional	GeneRIF Biological Term Annotations	1.0	null
MAFF_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
virus	GeneRIF Biological Term Annotations	1.0	null
secretions	GeneRIF Biological Term Annotations	1.0	null
EBNA2-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
BRD-A86629089	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21188
splunc1	GeneRIF Biological Term Annotations	1.0	null
regional	GeneRIF Biological Term Annotations	1.0	null
BRD-K79355381	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.5916
ANPEP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00667145
apoptosis	GeneRIF Biological Term Annotations	1.0	null
ventrolateral prefrontal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.957146
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.306632
infections	GeneRIF Biological Term Annotations	1.0	null
population	GeneRIF Biological Term Annotations	1.0	null
lymph	GeneRIF Biological Term Annotations	1.0	null
ERI1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00520284
MRGPRX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00480173
Pharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.238
increased susceptibility to Orthomyxoviridae infection induced morbidity/mortality	MGI Mouse Phenotype Associations 2023	1.0	null
FADU	CCLE Cell Line Gene Expression Profiles	1.0	1.39982
intermediate stratum of r3Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.63436
outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.0939
RSBN1L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00563448
GSE188870,GSE188871_4_v_2_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Micronuclei, Chromosome-Defective	CTD Gene-Disease Associations	1.0	1.34606
PMC12749419-41598_2025_28826_MOESM3_ESM.xlsx-RFT_iBody3_triplicate-Genes_MBD1	Rummagene Transcription Factor Associations 2026	1.0	null
MZ in posteror frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.13504
hippocampus (hippocampal formation)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855145
DNAJC5G	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00595548
BRD-K15025317_Bay 11-7821_PL21_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UterusCorpus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.02796
SETDB1	ENCODE Transcription Factor Targets	1.0	null
CELA2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0109144
r2 part of the trigeminal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10414
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.948962
BRD-K19540840_saracatinib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K83289131_CAY10618_HCT116_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Inverted Papilloma	DisGeNET Gene-Disease Associations	1.0	null
ERBB3_knockout_239_GSE32129	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.57502
gfi1b_22201127_amulv_gof_mouse_gpl6246_gds4302	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.84732
HNE-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.536
adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.574605
intermediate stratum of SePal	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.07956
CRCGN008_HEPG2_24H:J17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.4378
immune response in nasopharyngeal-associated lymphoid tissue	GO Biological Process Annotations 2025	1.0	null
BRD-K03902845	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.56481
primary somatosensory cortex (area S1, areas 3,1,2)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.882709
vitro	GeneRIF Biological Term Annotations	1.0	null
sheds	GeneRIF Biological Term Annotations	1.0	null
BRD-K92571446_WZ-3105_PC3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
formation	GeneRIF Biological Term Annotations	1.0	null
BRD-K49865102_PD-0325901_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K65814004_Diphenyleneiodonium chloride_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.2886
SG in caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.62277
BRD-K05877335	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1013
BRD-K76833108	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0132
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55327
antibacterial humoral response	GO Biological Process Annotations 2023	1.0	null
extracellular	GeneRIF Biological Term Annotations	1.0	null
BRD-A20463452	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26174
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.160456
inferolateral temporal cortex (area TEv, area 20)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10346
GPR55	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00776484
ITLN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00752699
r3 part of trigeminal transition zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.01282
Brain Lower Grade Glioma_LGG_TCGA-DU-A7T6-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KON	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
TNFSF4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00593998
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
biofilm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.835318
Disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.861
PSRC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00373284
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K78363521	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06254
OVCAR-8	COSMIC Cell Line Gene Mutation Profiles	1.0	null
skeletal muscle	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-A5R7-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.611
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A4AB-01B-12R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW1271	CCLE Cell Line Gene CNV Profiles	1.0	2.72806
Mafg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.8721
sublayer 6b of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04962
nasal lavage fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.44729
BRD-K78169765	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.88301
increased tumor necrosis factor secretion	MGI Mouse Phenotype Associations 2023	1.0	null
SOX2-21211035-LN229_GBM-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
regulation of monoatomic cation transmembrane transport	GO Biological Process Annotations 2023	1.0	null
BRD-K66848791	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35418
NCS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00717929
Tracheal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.798
Extrapulmonary bronchus_CT1_airway submucosal gland collecting duct epithelial cell	HuBMAP ASCT+B Augmented with RNA-seq Coexpression	1.0	null
subpallial amygdala	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27461
BRD-K03461876	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27378
inferolateral temporal cortex (area TEv, area 20)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.41108
binding	GO Molecular Function Annotations 2015	1.0	null
gramnegative	GeneRIF Biological Term Annotations	1.0	null
Tracheobronchial epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.89
RUSC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00547509
autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.049543
DPP9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00702868
BRD-K46924722	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.72983
Inverted Squamous Cell Papilloma	DisGeNET Gene-Disease Associations	1.0	null
ZNF768	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.5245
Lung adenocarcinoma_LUAD_TCGA-55-8203-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HDAC2	ENCODE Transcription Factor Targets	1.0	null
Sublingual gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.642
BRD-K54025526	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06645
Alcohol Related Birth Defect	DisGeNET Gene-Disease Associations	1.0	null
lower	GeneRIF Biological Term Annotations	1.0	null
Nasopharyngeal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.106
Ciliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.562
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	87.6237
Primary somatosensory area, lower limb	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.37363
BRD-K27356753	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26007
LU-65	GDSC Cell Line Gene Expression Profiles	1.0	1.98068
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5938
Ovary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.45753
BRD-K15931098	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19765
those	GeneRIF Biological Term Annotations	1.0	null
main	GeneRIF Biological Term Annotations	1.0	null
VEGFA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00597397
phenothrin	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44808
nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044215
SP in orbital frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.903952
XYLB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00517682
superficial stratum of r9BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.36486
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.4658
BL8483 (AAK1)	NURSA Protein Complexes	1.0	null
Villus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.007
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.0235
SK-LMS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TBK1_knockdown_53_GSE17643	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.57196
NCIH647	CCLE Cell Line Gene Expression Profiles	1.0	1.8502
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.18796
CIT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00536735
Apical plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.019
respiratory system phenotype	MPO Gene-Phenotype Associations	1.0	null
GSE248858_6_v_2_tcpobop_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
sublayer 6b of FCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.30915
subethmoid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15168
MAGI3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00721465
SW48	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Allergic Rhinitis (Disorder)	DisGeNET Gene-Disease Associations	1.0	null
single-organism process	GO Biological Process Annotations 2015	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JN-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UBC	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-A95513702_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SKMEL2	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.88131
developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.067782
U20S	BioGPS Cell Line Gene Expression Profiles	1.0	1.53844
BRD-K94888615	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.33679
CSNK1G2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00505782
hydroxyzine-2024	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H2AK5ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Primary somatosensory area, trunk, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.64451
NCIH889	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92034
acid	GeneRIF Biological Term Annotations	1.0	null
Cellular anatomical entity	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KCNA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00557079
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4960-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K12343256_trametinib_HS578T_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K67566344_KU-0063794_MDST8_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
superficial stratum of PO1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.336
tracheobronchial epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.650154
HTR6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00637482
TRAF3IP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0055649
RFX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0198
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.3789
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8058
HCC4006	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.896935
BRD-K57282030_JW-7-24-1_SKBR3_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
C4BPB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00597022
poliomyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.548971
BRD-K38831170	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45892
lichen planus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.250663
Lung adenocarcinoma_LUAD_TCGA-78-7159-01A-11R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RCHACV	CCLE Cell Line Gene Expression Profiles	-1.0	-1.68495
EFO-21	GDSC Cell Line Gene Expression Profiles	-1.0	-1.8248
BRD-K63354944	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06989
MZ in rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.32219
BRD-K12493093	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.5592
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-NFE2L2_NFE2L2	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF675	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.871
BRD-K98086832	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08332
dorsal raphe nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.26579
increased susceptibility to infection	MPO Gene-Phenotype Associations	1.0	null
DDX6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00801596
immune	GAD High Level Gene-Disease Associations	1.0	0.293278
AtrioventricularNode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.35829
PMC5524348-pone.0181667.s005.xlsx-Inflammation-MINT_SPEN	Rummagene Transcription Factor Associations 2026	1.0	null
SREBF1	JASPAR Predicted Transcription Factor Targets	1.0	null
NFATC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00742149
colonization	GeneRIF Biological Term Annotations	1.0	null
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.522
determinants	GeneRIF Biological Term Annotations	1.0	null
HTR4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00699034
response to biotic stimulus	GO Biological Process Annotations 2015	1.0	null
H3K27me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.173543
ADCY5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00504596
BRD-K47858507	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24507
superficial stratum of Mam	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.80608
squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.180652
increase	GeneRIF Biological Term Annotations	1.0	null
intermediate stratum of r10Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.44352
tissuespecific	GeneRIF Biological Term Annotations	1.0	null
Squamous epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.352
MAFK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4315
Bronchial epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.107
BRD-K50271780	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03004
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.1296
BRD-K72414522_AZD-5438_LNCAP_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
external part of AOV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.23565
BRD-K68985225	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.72209
integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046543
NCI-H1793	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24881
dexamethasone_rattus norvegicus_gpl1355_gds3746	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KYSE30	DepMap CRISPR Gene Dependency	1.0	2.35113
496100449_PCx_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	8.56705
when	GeneRIF Biological Term Annotations	1.0	null
rostral presubiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.897628
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JP-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3653
Perturb_11493_OE_Tnfsf15_SRP106312	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-2.46805
Perturb_17418_KO_Myd88_ERP115704	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	5.6646
trachea	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.175563
SHROOM3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00841512
Bronchial disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.179
SNU738	CCLE Cell Line Gene Expression Profiles	1.0	1.59526
sublayer 6a of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.25005
BRD-K69903198	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41767
BRD-K74963702	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07167
Omasum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.878
preoptic alar plate	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16324
Respiratory failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.291
BRD-K57200567	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.03866
antimicrobial humoral response	GO Biological Process Annotations 2025	1.0	null
allergic rhinitis	GAD Gene-Disease Associations	1.0	null
detailed	GeneRIF Biological Term Annotations	1.0	null
BRD-K01452910	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30426
BRD-K47584662	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.89846
BRD-A41250203_-666_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2464
parataenial nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.958665
chinese	GeneRIF Biological Term Annotations	1.0	null
BRD-K76674262_-666_ASC_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ROPN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00553937
BRD-K43341506	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05243
BRD-K20110031	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02424
Sweat gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.994
FBXO7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00441619
JAG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00580344
BRD-K92571446_WZ-3105_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
precommissural nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.90783
BRD-K19139070	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27298
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.556
lichen disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.24996
regulation of body fluid levels	GO Biological Process Annotations 2015	1.0	null
Lung Neoplasms	CTD Gene-Disease Associations	1.0	1.43782
OC-314	GDSC Cell Line Gene Expression Profiles	-1.0	-1.62604
Nasal epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.755
ASGR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00551953
Perturb_15284_KO_Trp73_SRP067006	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-14.4879
Eccrine sweat gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.781
enhance	GeneRIF Biological Term Annotations	1.0	null
BRD-K94962942	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.57483
BRD-K52520268	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51307
Field CA1, stratum pyramidale	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.06757
BRD-K37253987	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03562
CRCGN014_HEPG2_24H:A20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.65203
ventrolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.49175
mantle zone of PO1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0811
COLO-699 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.463
FOSL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00622863
NarGHI complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.863
CYP17A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00822969
sideroblastic anemia with spinocerebellar ataxia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.852402
amygdaloid complex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.866045
tracheobronchial epithelium	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-K75037209	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.9532
GABRA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00463347
measured	GeneRIF Biological Term Annotations	1.0	null
BRD-K34533029_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
anteroventral periventricular preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.09466
KCNA6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00524047
GPR35	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00585498
negative regulation of single-species biofilm formation in or on host organism	GO Biological Process Annotations 2025	1.0	null
BRD-A18825024	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23267
periventricular stratum of AStr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.34586
cleaved	GeneRIF Biological Term Annotations	1.0	null
Head and neck carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.029
P30-OHK	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K13514097_S1120_VCAP_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
stage	GeneRIF Biological Term Annotations	1.0	null
r3 part of the trigeminal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02031
MUTZ8	DepMap CRISPR Gene Dependency	1.0	2.79556
PPIP5K2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0057674
ID2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00497462
Neutrophil extracellular trap	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.353
vagina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.193043
GSE210885_3_v_7_klf4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CCSER1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00551797
BRD-K19216856_(-)-Gallocatechin gallate_AGS_6.0_h_88.8_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMC7021771-41467_2020_14684_MOESM7_ESM.xlsx-CASZ1_ChIPseq_in_SMS-CTR_MEKi-Gene_Name_CASZ1	Rummagene Transcription Factor Associations 2026	1.0	null
epithelial	GeneRIF Biological Term Annotations	1.0	null
AN3 CA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.854613
PMC9181267-mmc5.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-orthofinder_human_gene_names_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
Pneumonia	DisGeNET Gene-Disease Associations	1.0	null
repeated	GeneRIF Biological Term Annotations	1.0	null
FOLR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00611055
BRD-K83438939	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09128
KAT6A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00593891
CTCF_fibroblast of foreskin _hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00603365
BRD-K79946769	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37308
BRD-K20009653	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65629
BRD-K34088127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01879
Dental Caries	DisGeNET Gene-Disease Associations	1.0	null
BRD-K00313977_-666_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K62154563	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.62799
stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.18621
BRD-A19500257_geldanamycin_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A39646320_H7270_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K24133999	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19611
Apical part of cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.026
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06461
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892794
inhibitory	GeneRIF Biological Term Annotations	1.0	null
BRD-K59670689	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.30309
GSE188870,GSE188871_1_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC9437808-mmc3.xlsx-IPA_Upstream_regulators-IPA_Upstream_regulator_analysis_Up_regulated_genes_following_LPS_treatment_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
MCM4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00490909
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10273
Asthma	DisGeNET Gene-Disease Associations	1.0	null
product	GeneRIF Biological Term Annotations	1.0	null
BRD-K16079077	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2449
eosinophilic	GeneRIF Biological Term Annotations	1.0	null
SERPINB8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00557664
defense response to other organism	GO Biological Process Annotations 2015	1.0	null
BRD-A31107743_89671_HT29_24.0_h_0.09_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
increased susceptibility to Orthomyxoviridae infection	MGI Mouse Phenotype Associations 2023	1.0	null
BRD-K72807299	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35382
Obstructive lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.031
BRD-K50168500_canertinib_SKBR3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Primary somatosensory area, trunk	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.40219
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
pharynx cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.141638
BRD-K48488978_YM-201636_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SP in perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.15883
CRCGN013_HEPG2_24H:K09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.09137
Spinal nucleus of the trigeminal, oral part, rostral dorsomedial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.55688
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.58141
M14	COSMIC Cell Line Gene Mutation Profiles	1.0	null
negative regulation of single-species biofilm formation in or on host organism	GO Biological Process Annotations 2015	1.0	null
amygdaloid complex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.912333
HCT-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97689
hsa-miR-195	TargetScan Predicted Conserved microRNA Targets	1.0	0.714812
Fetal Alcohol Syndrome	DisGeNET Gene-Disease Associations	1.0	null
superficial stratum of PCx (cortical plate/marginal zone)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72299
BRD-K36099605	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1627
Extrapulmonary bronchus_CT1_airway submucosal gland collecting duct epithelial cell	HuBMAP ASCT+B Annotations	1.0	null
nsclc	GeneRIF Biological Term Annotations	1.0	null
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.1556
bronchial	GeneRIF Biological Term Annotations	1.0	null
discoveries	GeneRIF Biological Term Annotations	1.0	null
BRD-K52911425_GDC-0941_A549_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K78813464	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.92487
MKN1	GDSC Cell Line Gene Expression Profiles	-1.0	-1.48631
Common cold	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.15
BRD-K52406139	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43953
HIBCH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00483948
SREBF2	ChEA Transcription Factor Targets	1.0	null
mediodorsal nucleus of thalamus_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.19085
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4707-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ERBB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00463911
BRD-K48869804_Icilin_VCAP_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K78659596_MLN2238_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K88573743_A443654_SKBR3_3_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Tear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.957
multicellular organismal water homeostasis	GO Biological Process Annotations 2015	1.0	null
BRD-K12343256_trametinib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Hand1::Tcf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.5517
CYP1A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00854367
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.207
Arntl	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.1977
CGAS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00553574
Skin Diseases	CTD Gene-Disease Associations	1.0	1.01776
Perturb_11890_OE_Ddah1_SRP027595	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-8.81902
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.05562
BRD-U08759356_EI-346_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K56939159	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.36883
SP in dorsomedial extrastriate cortex (V2)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.909312
regulation of localization	GO Biological Process Annotations 2015	1.0	null
immune response	GO Biological Process Annotations 2015	1.0	null
Ebolavirus(ZEBOV)_1day_Liver_None_GSE57214	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.30657
Primary somatosensory area, upper limb, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.64961
Palate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.941
caudal portion of VFC (area 44)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.64507
ALDH18A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00389739
lymphoepithelioma-like carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.638676
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.0504
alltransretinoic	GeneRIF Biological Term Annotations	1.0	null
bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.85482
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7354
BRD-K83966071	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10855
CKMT1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00745437
hsa-miR-3941	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
lateral part of r10B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04644
BRD-K32896438_-666_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Sinusitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.001
MAG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00780636
Lung adenocarcinoma_LUAD_TCGA-55-7724-01A-11R-2170-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE205163,GSE205164_3_v_6_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
sinusitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.1755
BRD-K95435023_PHA-665752_SKBR3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE248858_4_v_2_tcpobop_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Lymphnode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.972472
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.3597
inner CP in orbital frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.842886
Chronic Obstructive Airway Disease	DisGeNET Gene-Disease Associations	1.0	null
island of Calleja major	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.22218
Kidney Chromophobe_KICH_TCGA-KO-8417-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Uterine Cervical Neoplasms	CTD Gene-Disease Associations	1.0	1.05972
BRD-A19500257_geldanamycin_HS578T_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KAT2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00380171
lipid binding	GO Molecular Function Annotations 2015	1.0	null
polymorphic layer of caudal subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.846428
BRD-K64840743	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29355
Inflammation	CTD Gene-Disease Associations	1.0	1.70988
diagnostic	GeneRIF Biological Term Annotations	1.0	null
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.5668
pulmonary	GeneRIF Biological Term Annotations	1.0	null
S100A9 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.777
cerebellar cortex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.835987
DMS114	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53343
Amylin receptor complex 1	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.177
KNG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00612593
UPCISCC116	DepMap CRISPR Gene Dependency	1.0	2.37341
NCI-H2029	GDSC Cell Line Gene Expression Profiles	1.0	1.82801
BRD-K88890050	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.73346
event	GeneRIF Biological Term Annotations	1.0	null
TYRO3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00456469
Cell Transformation, Neoplastic	CTD Gene-Disease Associations	1.0	1.16799
oval paracentral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.34983
TRIO	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00504586
BRD-K21864149	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05096
BRD-K81418486_vorinostat_VCAP_24.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Primary somatosensory area, lower limb, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11672
Kartagener syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.127
layer II of rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.88066
ATP2A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00740385
NZOV9	DepMap CRISPR Gene Dependency	1.0	5.6404
BRD-K81528515_nilotinib_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K72238567_656402-250MG_ASC_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
layer 5 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.35924
BRD-K27665173_PDGF Receptor Tyrosine Kinase Inhibitor I_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
vivo	GeneRIF Biological Term Annotations	1.0	null
BRD-K31342827_GF-109203X_HT29_24.0_h_12.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Bronchoalveolar system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CRCGN015_MCF10A.TP53.M_24H:D13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.05225
cervicovaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.609332
Middle ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.102
hepatoid	GeneRIF Biological Term Annotations	1.0	null
MAFK_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
retinoid	GeneRIF Biological Term Annotations	1.0	null
prognosis	GeneRIF Biological Term Annotations	1.0	null
NCI-H358 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.891
FCER1G	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00661159
BRD-K73635724	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.29384
PARP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00377236
biochemical	GeneRIF Biological Term Annotations	1.0	null
OGFR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0047051
BRD-A25869984	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.48462
BRD-K11267252_CH5424802_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
defense response to bacterium	GO Biological Process Annotations 2023	1.0	null
LCLC97TM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34714
HS766T	CCLE Cell Line Gene CNV Profiles	1.0	2.159
potently	GeneRIF Biological Term Annotations	1.0	null
IFITM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00589234
SG in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.35904
onto	GeneRIF Biological Term Annotations	1.0	null
Mucus layer	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.514
EDN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00476877
EFNA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00469785
UPB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00571624
FAAH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00514417
J82	CCLE Cell Line Gene CNV Profiles	1.0	1.84832
BRD-K57080016_-666_SNGM_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MAFK	ENCODE Transcription Factor Targets	1.0	null
superficial stratum of r6BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37777
BRD-K41859756_-666_PL21_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K11518913	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51426
BRD-K19418944	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.57745
Viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.728
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7283
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4459
nose disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.12193
BRD-K49328571_dasatinib_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A76490030_K784-3131_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OP-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SPINK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00606646
BRD-K63606607_bufalin_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K51335814	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0037
GSE205163,GSE205164_3_v_4_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-A67788537_Salermide_PC3_24.0_h_120.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Non-Small Cell Lung Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Alveolar epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.31
sensor	GeneRIF Biological Term Annotations	1.0	null
BRD-K11672894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.80162
oral	GeneRIF Biological Term Annotations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A3HF-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K43108627	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4493
HDAC11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00487776
striatal amygdala	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26014
Asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.106
CRCGN015_HEPG2_48H:I07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.20089
KINGS1	DepMap CRISPR Gene Dependency	1.0	2.18212
LPAR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00795649
Perturb_17410_KO_Kat7_SRP346205	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
r10 part of spinal vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.44191
BRD-K03884263	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34298
Secretory cell_Trachea_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
hsa-miR-625	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
Pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.802
CRCGN017_MCF10A.TP53.M_24H:E16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.49168
regulation of single-species biofilm formation in or on host organism	GO Biological Process Annotations 2023	1.0	null
volume	GeneRIF Biological Term Annotations	1.0	null
utility	GeneRIF Biological Term Annotations	1.0	null
CALB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00603805
ISLR2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00699595
Pharyngeal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.532
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.8245
GB1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.84763
Lung adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.207
posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.895739
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12306
SC-187 (ATF2)	NURSA Protein Complexes	1.0	null
BRD-K49865102_PD-0325901_MCF10A_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
intermediate stratum of r10BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04644
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.171
BRD-A39996500_radicicol_HS578T_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UO31	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.17192
obstructive lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.259124
H3K27me3_Treg Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
REXO2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00501393
BRD-K43159427	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09654
benign	GeneRIF Biological Term Annotations	1.0	null
Neuroendocrine cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.209
magnocellular division of VA	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.895778
SNB19	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.63653
channel	GeneRIF Biological Term Annotations	1.0	null
GSE239844_8_v_0_crizotinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Trachea_CT1_airway submucosal gland collecting duct epithelial cell	HuBMAP ASCT+B Annotations	1.0	null
needed	GeneRIF Biological Term Annotations	1.0	null
BRD-K49371609_528116.cdx_COV644_6.0_h_0.09_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
serous gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.75371
SG in primary auditory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.11015
preopto-hypothalamic area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10589
BRD-K14442101	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10746
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.163641
TFAP2A-17053090-MCF7-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
mantle zone of CA	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00959
Carcinoma Of Lung	DisGeNET Gene-Disease Associations	1.0	null
into	GeneRIF Biological Term Annotations	1.0	null
specifically	GeneRIF Biological Term Annotations	1.0	null
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.1702
BRD-K24132293_piperlongumine (HPLC)_NCIH1836_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K51448234	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14582
Posterior parietal association areas, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.228
GABRA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00496179
Cnida	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.082
BRD-K36997940	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43321
Signal peptidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.159
lmp1	GeneRIF Biological Term Annotations	1.0	null
periventricular stratum of PO1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.52911
CRCGN011_HEPG2_24H:D11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.2705
Liver Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.06661
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52044
neutrophil	GeneRIF Biological Term Annotations	1.0	null
Ductus Arteriosus, Patent	HuGE Navigator Gene-Phenotype Associations	1.0	null
BRD-K72029544	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14165
Fungal infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
salivary gland	GTEx Tissue Gene Expression Profiles	1.0	0.928942
PTP4A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00669655
ABL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00273752
Olfactory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.938
Clara cell_Trachea_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
MEWO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SCUBE1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00415612
Meconium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.624
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.1632
genetic	GeneRIF Biological Term Annotations	1.0	null
Trachea-tracheal goblet cell	Tabula Sapiens Gene-Cell Associations	1.0	5.64538
Kidney Chromophobe_KICH_TCGA-KL-8338-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
differences	GeneRIF Biological Term Annotations	1.0	null
BRD-K95121261	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19254
anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.929411
Chronic asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.536
Pavement epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.986
secretory granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.107846
BRD-K68303333	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1916
regulation of single-species biofilm formation in or on host organism	GO Biological Process Annotations 2015	1.0	null
increased tumor necrosis factor secretion	MPO Gene-Phenotype Associations	1.0	null
Nr1h3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3786
PECAPJ41CLONED2	DepMap CRISPR Gene Dependency	1.0	4.06886
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.729
Stat2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.8762
HT144	CCLE Cell Line Gene Expression Profiles	-1.0	-3.28647
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52044
abnormal	GeneRIF Biological Term Annotations	1.0	null
PMC11976269-41375_2025_2519_MOESM3_ESM.xlsx-ChIP_GATA2_Cluster_A-GeneName_GATA2	Rummagene Transcription Factor Associations 2026	1.0	null
Middle ear cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.938
antibacterial humoral response	GO Biological Process Annotations 2015	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A20U-01A-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K72414522_AZD-5438_MCF7_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Jun	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.2626
MAPK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00445897
GSE153124_4_v_0_dsg2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
respiratory system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
HCLS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0077758
BRD-K49328571_dasatinib_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CSF3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0074745
Field CA1, stratum oriens	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24905
Kidney renal clear cell carcinoma_KIRC_TCGA-B2-5641-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1958
Pneumonia	CTD Gene-Disease Associations	1.0	1.19607
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MK-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K81884810	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36125
HEP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.99195
TE4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38887
tissue	GeneRIF Biological Term Annotations	1.0	null
Lamellar body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.108
BRD-K72703948_ZM-447439_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE181966_5_v_3_has2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Lung	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
BRD-K12184916_NVP-BEZ235_HS578T_3_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NELL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0055544
Thymus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.16881
anterior digastric muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4425
Recurrent Tumor	DisGeNET Gene-Phenotype Associations	1.0	null
Cholesteatoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.513
SLCO1B3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00806655
TUBA3C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0052547
ALDH1A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00466937
displays	GeneRIF Biological Term Annotations	1.0	null
MRPS18A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00838377
Respiratory epithelium cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.346
hsa-miR-335-5p	MiRTarBase microRNA Targets	1.0	null
sublingual gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.456055
spleen	GTEx Tissue Gene Expression Profiles	-1.0	-1.31146
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24718
Prostate adenocarcinoma_PRAD_TCGA-HC-7745-11A-01R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9ac_Skeletal Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.919532
BMI1	ChEA Transcription Factor Targets	1.0	null
Intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.232
BRD-K13089873	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30055
BRD-K47988839	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21058
cancer	GAD High Level Gene-Disease Associations	1.0	0.293278
CLEC12B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00760597
SELE	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0061348
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.4894
BRD-K00243272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2616
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.5373
BRD-K75679095	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00635
primary auditory cortex (core)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.44193
Hyperplasia	CTD Gene-Disease Associations	1.0	1.72034
BST1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00528688
Trachea	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.177
GSE180525,GSE180528_2_v_0_tbx3_human	RummaGEO Gene Perturbation Signatures	1.0	null
PMC8612733-elife-71982-fig7-data1.xlsx-Sheet1-3xFlag-YBX1_IP-MS_from_sheet2_YBX1	Rummagene Transcription Factor Associations 2026	1.0	null
Extracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.35
Bladder Urothelial Carcinoma_BLCA_TCGA-GD-A2C5-11A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RCSD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00516624
Basolateral amygdalar nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10595
polymorphisms	GeneRIF Biological Term Annotations	1.0	null
cystic	GeneRIF Biological Term Annotations	1.0	null
Gli2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.6128
COV362	CCLE Cell Line Gene Expression Profiles	1.0	1.35026
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Esrrg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.9145
SLC12A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00655254
GSE77569_0_v_1_bexarotene_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.286
more	GeneRIF Biological Term Annotations	1.0	null
BRD-K01793276	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58808
endometrial stromal tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.418394
BRD-K72774661	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23545
PMC3245917-supp_gkr685_nar-01129-x-2011-File015.xls-ST12-Unnamed_1_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-A48237631_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Interstitial lung disease 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.335
BRD-K49159670	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42373
Biofilm matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.209
PLXNC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00502013
BRD-K67118123_MLS-0106435.0004_A375_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ORAI1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00559307
BRD-A39996500_radicicol_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K13094524_PFI-1_PC3_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
boys	GeneRIF Biological Term Annotations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-39-5028-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TSPAN7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00632138
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.468
BL6632 (FOXK1)	NURSA Protein Complexes	1.0	null
SG in posterior frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.24952
DMS53	DepMap CRISPR Gene Dependency	1.0	3.35774
BRD-K12343256_trametinib_BT20_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
nasopharynx carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.975482
BRD-K37456065_VU0365114-2_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LNX1	Pathway Commons Protein-Protein Interactions	1.0	null
IRF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00720231
Perturb_11514_KO_Il9r_SRP318774	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.24172
Smooth-surface caries	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.569897
shed	GeneRIF Biological Term Annotations	1.0	null
SREBP2-21459322-LIVER-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
PADI6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0050417
NCI-H82	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Pancreatic juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.632
BRD-K50260295	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.23948
BT-474	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969268
SLC45A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00410922
periventricular stratum of TPaA	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.61322
chronic	GeneRIF Biological Term Annotations	1.0	null
BRD-A02180903_BETAMETHASONE_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PMC4831838__F4	PFOCR Pathway Figure Associations 2023	1.0	null
BRD-K52045590	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01255
BRD-K26063034	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36662
Hepatoid adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.993
BRD-K44100512_KIN001-043_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Calu-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.173
EFO-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06461
BRD-K45859834	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16885
membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.053135
NPC-TW04 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.805
BRD-A64290322_Cyclosporin A_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K50168500_canertinib_HME1_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Nr5a1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.4341
Perturb_2816_KD_SUFU_SRP346101	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	6.01125
middle	GeneRIF Biological Term Annotations	1.0	null
SUFU	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00617152
Primary somatosensory area, trunk, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.77458
BRD-A50454580_Axon1408_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.3808
mouth	GeneRIF Biological Term Annotations	1.0	null
BRD-A45498368_WYE-125132_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Pneumonitis	DisGeNET Gene-Disease Associations	1.0	null
RDH11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00487563
Saliva	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.187
BRD-K90460185	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20157
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.94485
BRD-K05804044_HY-11004_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-8615-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXA9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0100384
Nasal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.079
amygdaloid complex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.81028
WM983B	CCLE Cell Line Gene CNV Profiles	1.0	1.52162
sublayer 6b of InsCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.38245
airways	GeneRIF Biological Term Annotations	1.0	null
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57856
inhaled	GeneRIF Biological Term Annotations	1.0	null
Lung adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.355
Lung squamous cell carcinoma_LUSC_TCGA-39-5011-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Visual areas	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.15636
ECGI10	CCLE Cell Line Gene CNV Profiles	-1.0	-2.1821
CTRC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00697716
BRD-K10882151_BO2 (inhibits RAD51)_HA1E_24.0_h_40.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PTPN12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00439752
BRD-K72156149	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12167
intermediate stratum of r10Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06116
PMC7481169-277_2020_4194_MOESM9_ESM.xlsx-RUNX1_R139G-RUNX1_R139_mutant_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
EGR1	ChEA Transcription Factor Targets	1.0	null
BRD-K71368065	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16323
SARC9371	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BMI1-19503595-MEFC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
KCNQ4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00539715
negative regulation of single-species biofilm formation	GO Biological Process Annotations 2015	1.0	null
Peptidase inhibitor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.292
Submucosal gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.63
BRD-K60188481	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.48995
ae3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.895
Severe Periodontitis	DisGeNET Gene-Disease Associations	1.0	null
Primary ciliary dyskinesia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.727
Nasal squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.195
extracellular region	GO Cellular Component Annotations 2015	1.0	null
suprachiasmatic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38423
BRD-K31269097	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09773
BRD-A19037878_trichostatin A_VCAP_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Huntington's Disease_CNS - Brain - Striatum (MMHCC)_GSE7958	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.52438
TT cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.587
intraocular retinoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.581606
mucosal	GeneRIF Biological Term Annotations	1.0	null
LN235	DepMap CRISPR Gene Dependency	1.0	3.14172
HCC4006	CCLE Cell Line Gene CNV Profiles	-1.0	-2.28521
dilution	GeneRIF Biological Term Annotations	1.0	null
Vitelline membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.362
Lung epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.854
PMC12749419-41598_2025_28826_MOESM3_ESM.xlsx-RFT_iBody3_hexaplicate-Genes_MBD1	Rummagene Transcription Factor Associations 2026	1.0	null
skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047169
superficial stratum of THyB-V	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09707
estradiol_homo sapiens_gpl570_gds3283	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Dental plaque	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.541
BRD-K06166879	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29118
lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.542379
BRD-A68009927_daunorubicin_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K04928505	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.50594
Raji	GDSC Cell Line Gene Expression Profiles	1.0	1.63072
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.995
Rfx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.8946
mRNA_SUZ12_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
surfactant homeostasis	GO Biological Process Annotations 2023	1.0	null
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.208
CRCGN015_MCF10A_48H:D19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.11262
decreased	GeneRIF Biological Term Annotations	1.0	null
mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.079699
intermediate stratum of SeDg	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03585
nasopharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.51855
Germinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.793
HEXA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00656217
BRD-K04853698_-666_COV644_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A31107743_89671_SW620_6.0_h_0.09_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
primary visual cortex (striate cortex, area V1/17)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.31689
H2591	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ITGB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00554906
BRD-K00505499	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08593
BRD-K31010207	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14977
KMBC2	CCLE Cell Line Gene CNV Profiles	1.0	1.90342
specific granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.259109
APCDD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00589606
BL3263 (NHEJ1)	NURSA Protein Complexes	1.0	null
lung	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.224645
Lung adenocarcinoma_LUAD_TCGA-55-6642-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GATM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00951247
BRD-K58853583_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.973087
SYK_knockdown_279_GDS3609	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	2.5049
endometrial cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.133575
antimicrobial	GeneRIF Biological Term Annotations	1.0	null
Keratosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.058
BRD-K07602825	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00831
ventrolateral prefrontal cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.951546
variants	GeneRIF Biological Term Annotations	1.0	null
SREBP2-21459322-LIVER-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.602
GSE149901_3_v_1_anlotinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.941
Egg white	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.391
Perturb_12121_KO_Aire_SRP250736	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
mediate	GeneRIF Biological Term Annotations	1.0	null
Pellicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.409
TM9SF4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00444999
PMC10247733-41408_2023_863_MOESM2_ESM.pdf-43-BNC1_BNC1	Rummagene Transcription Factor Associations 2026	1.0	null
GULP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00409309
imatinib_homo sapiens_gpl96_gds3044	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
A375SKINCJ3	DepMap CRISPR Gene Dependency	1.0	2.71645
Lung-respiratory goblet cell	Tabula Sapiens Gene-Cell Associations	1.0	2.34671
POLE3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00475863
accumbens nucleus, shell domain	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19103
reduced	GeneRIF Biological Term Annotations	1.0	null
BRD-K00909602	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.38947
MAFF	ENCODE Transcription Factor Targets	1.0	null
Lung adenocarcinoma_LUAD_TCGA-73-4659-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
A2058	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.854613
periventricular stratum of APal	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4161
Adenoid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.115
phsensitive	GeneRIF Biological Term Annotations	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8428-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Respiratory syncytial virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.005
BRD-K07691486_-666_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
aplastic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.140639
BRD-K95895516	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2664
CCDC50	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0088794
CYP3A7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.009468
captopril_mus musculus_gpl1261_gds3683	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
superficial stratum of THyB-P	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.96457
Alveolar cell type II	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.124
SG in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.56821
clone	GeneRIF Biological Term Annotations	1.0	null
BRD-K85965830	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1587
PMC11825621-210_2024_3353_MOESM2_ESM.xlsx-AR-IL13_AR	Rummagene Transcription Factor Associations 2026	1.0	null
KEAP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00653898
GABRA3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00552378
BRD-K24496482_SB590885_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.772
BRD-K18828858	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10927
BRD-K79576342	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05987
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.8465
Zfx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.2929
Epstein-Barr virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
against	GeneRIF Biological Term Annotations	1.0	null
primary motor-sensory cortex (samples)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.00661
BRD-K25982056	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.53503
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2048
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.049
Carpal tunnel syndrome 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
stratum pyramidale of caudal CA2	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.85153
spinalcordlower	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.00535
BRD-K49328571_dasatinib_HT29_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
forestomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.240826
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23168
nonsmokers	GeneRIF Biological Term Annotations	1.0	null
BRD-K06792661_Narciclasine_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CYP2D7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00577613
multi-organism process	GO Biological Process Annotations 2015	1.0	null
PMC4382988__F4	PFOCR Pathway Figure Associations 2023	1.0	null
protein binding	GO Molecular Function Annotations 2015	1.0	null
BRD-K44027058	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.57767
Bladder Urothelial Carcinoma_BLCA_TCGA-XF-A8HI-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
respiratory epithelium cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.752057
BRD-A46631350	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24739
orbital frontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.90688
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.58387
posteroventral (inferior) parietal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.839467
MKN74	CCLE Cell Line Gene CNV Profiles	1.0	1.79823
ENPP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00621692
BRD-K34445094	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1397
primary somatosensory cortex (area S1, areas 3,1,2)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04529
Lung bud	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.804
first (dorsal) preoptic domain	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0811
positive	GeneRIF Biological Term Annotations	1.0	null
respiratory	GeneRIF Biological Term Annotations	1.0	null
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.306632
BRD-K22633587	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.107
H3K27me3_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K46015322	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06719
papillary adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.448064
MZ in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.20455
BRD-K05221385	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40852
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.994455
BRD-K48654774_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K96120749	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.32657
intermediate stratum of LAP	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0352
H3K27me3_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K37764012_PF-3758309_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K78431006_crizotinib_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-LB-A7SX-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K21635266	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.74245
Respiratory smooth muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.353
TM31	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8522
method	GeneRIF Biological Term Annotations	1.0	null
alitretinoin_homo sapiens_gpl6480_gse43090	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Bronchoalveolar lavage fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.593
BRD-K74302837	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.6324
ARHGAP27	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00518256
Lung adenocarcinoma_LUAD_TCGA-44-8119-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bronchiolar epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.638
crucial	GeneRIF Biological Term Annotations	1.0	null
SETDB1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-22-5478-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1770	COSMIC Cell Line Gene Mutation Profiles	1.0	null
members	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-497	TargetScan Predicted Conserved microRNA Targets	1.0	0.517189
teeth hard tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.173314
septal organ	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.14276
superficial stratum of PO2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.13764
BRD-K28510065	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.86014
BRD-A16119053	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24403
OXSR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00654528
BRD-K05251963	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24377
regulation of ion transport	GO Biological Process Annotations 2015	1.0	null
Cepacia syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.101
C2BBE1	CCLE Cell Line Gene CNV Profiles	1.0	1.61339
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.066
sites	GeneRIF Biological Term Annotations	1.0	null
interface	GeneRIF Biological Term Annotations	1.0	null
BRD-A75409952_wortmannin_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Anterior olfactory nucleus, external part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.81537
SG in dysgranular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.91296
Carcinoma, Squamous Cell	HuGE Navigator Gene-Phenotype Associations	1.0	null
BRD-K85606544_neratinib_MCF10A_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
atrainduced	GeneRIF Biological Term Annotations	1.0	null
Oral squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.146
BRD-K35035851	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.48638
RNASE3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00507418
IL9R	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00578937
MDA-MB-435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69276
BRD-A55025683	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19825
BRD-K22789469	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.36667
Glandular epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.269
Nkx2-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.8045
MAFK_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-A19037878_trichostatin A_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
immunoblots	GeneRIF Biological Term Annotations	1.0	null
BRD-K12502280_TG101348_NCIH1694_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Pleomorphic adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.168
Sodium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.939
Salivarygland	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.884039
immune system phenotype	MPO Gene-Phenotype Associations	1.0	null
BRD-K79321447	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08937
negative regulation of multi-organism process	GO Biological Process Annotations 2015	1.0	null
retinoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.132931
Bronchial epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.905
Eggshell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.705
U118MG	CCLE Cell Line Gene Expression Profiles	-1.0	-1.66746
girls	GeneRIF Biological Term Annotations	1.0	null
MZ in caudal cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.874728
outer CP in posterosuperior (dorsal) parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.51286
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
primary visual cortex (striate cortex, area V1/17)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.874405
ITGA8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00584381
alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
THNSL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00482811
BRD-K80166820	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03172
Bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.36
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.4781
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.1605
BRD-K55018894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49875
Bactericidal permeability-increasing protein, alpha/beta domain	InterPro Predicted Protein Domain Annotations	1.0	null
Papillary cystadenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.488
496100572_HIP_possible Alzheimer's disease_no TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	9.08494
ETV1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00388109
BRD-K75844451	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44156
tuberal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.11231
primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.891743
primary auditory cortex (core)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.27378
CHD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00376891
DCLK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00551853
BRD-K88538240	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06946
BRD-K29652917	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01334
Anthracosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.268
regions	GeneRIF Biological Term Annotations	1.0	null
Posterior parietal association areas, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07691
SARS-CoV_24Hour_23935999_GSE47960	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.84756
ATM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00639897
Respiratory system_CT1_airway submucosal gland collecting duct epithelial cell	HuBMAP ASCT+B Augmented with RNA-seq Coexpression	1.0	null
RHEBP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00585523
hsa-miR-922	TargetScan Predicted Conserved microRNA Targets	1.0	0.670641
Field CA2, pyramidal layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19458
BRD-K28853245	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13996
BRD-K81418486_vorinostat_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
autoantibodies	GeneRIF Biological Term Annotations	1.0	null
superior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.23644
GSE183890_7_v_6_ifitm3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
nasg	GeneRIF Biological Term Annotations	1.0	null
Periodontitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.353
CRCGN011_HEPG2_24H:N20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.55235
pathogen	GeneRIF Biological Term Annotations	1.0	null
BCL2L1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00658962
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045599
SLC18A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00459933
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.0088
BRD-K11113009	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.70058
CRCGN011_HEPG2_24H:K01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.2294
SUDHL5	DepMap CRISPR Gene Dependency	1.0	3.69747
lateral ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17557
CEP43	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00720129
Bacterial pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.287
BRD-K70511574_sunitinib_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TNNC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00681881
BRD-K57497543	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04997
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.257
hsa-miR-4710	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.463
Bronchial mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.735
Pharyngeal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.738
BRD-K20831543	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1456
pharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.4011
Tracheobronchial epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.969
CISD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00699931
GSE65617_5_v_1_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Bronchoalveolar stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.924
pallidal amygdala	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.32402
GSE239844_7_v_0_crizotinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
MAP3K10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0054609
egg	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.628293
CFH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00709405
abnormal interleukin-1 beta secretion	MPO Gene-Phenotype Associations	1.0	null
GSE154074_2_v_0_bleomycin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K79090631_CGP-60474_HA1E_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ACSM5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00583819
Primary somatosensory area, upper limb	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.10109
lysates	GeneRIF Biological Term Annotations	1.0	null
epstein	GeneRIF Biological Term Annotations	1.0	null
HL60	BioGPS Cell Line Gene Expression Profiles	1.0	0.830545
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.31013
ATP1B1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00358996
TE1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50818
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.472
superficial stratum of OCx (cortical plate/marginal zone)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07178
NR1D2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3234
Lung adenocarcinoma_LUAD_TCGA-05-4384-01A-01R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.1097
PMC12700831-41594_2025_1680_MOESM4_ESM.xlsx-D9_MC_Hits_2_5FC_CRAPomeFilt-Mapped_Gene_Symbol_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
nasal	GeneRIF Biological Term Annotations	1.0	null
BRD-K87737963_CYT387_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062945
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.056
BRD-K48046422	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.50661
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4035
endometrial stromal sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.421016
stratum lacunosum-moleculare of rostral CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.07824
BRD-K86722849	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01794
provided	GeneRIF Biological Term Annotations	1.0	null
BRD-K03093950	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05126
Nkx3-2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.9626
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.161912
oral epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.262304
Myocardial Infarction	CTD Gene-Disease Associations	1.0	1.01212
away	GeneRIF Biological Term Annotations	1.0	null
CRCGN008_HEPG2_24H:M12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.12605
Parotid gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.846
NCIH747	CCLE Cell Line Gene CNV Profiles	1.0	1.35285
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4268
NTRK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00413131
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.089346
SLAMF8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0074046
BRD-K72452130	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.46023
retinal cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.129363
BRD-K26838195_AST1306_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	136.924
BRD-A85860691_chaetocin_OV7_6.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K96619480	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02272
Diabetes Mellitus	DisGeNET Gene-Disease Associations	1.0	null
BRD-K76703230_YM-155_EFO27_6.0_h_0.31_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
INPP5D	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.006868
uterine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.119564
BRD-K16485616_mocetinostat_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PRKCI	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00541529
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZB-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
lung epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.395709
CORL95	CCLE Cell Line Gene Expression Profiles	1.0	2.40867
BRD-K27147269	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13434
salivary gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.144212
BRD-K13390322_AT-7519_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Bronchitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.459
BRD-K02180800	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06169
ENAM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0054867
oral cavity cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.134423
Deuterosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.611
external granular (germinal) layer of upper rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.06026
research	GeneRIF Biological Term Annotations	1.0	null
Respiratory allergy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.844
Nasopharyngeal carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.024
regulation of sodium ion transmembrane transport	GO Biological Process Annotations 2023	1.0	null
BRD-K49659981	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59555
IZ in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.41205
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.838842
endoplasmic reticulum part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.096532
Respiratory system_CT1_airway submucosal gland collecting duct epithelial cell	HuBMAP ASCT+B Annotations	1.0	null
Chronic frontal sinusitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.047
EFM192A	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88808
COL18A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00617922
Brain Lower Grade Glioma_LGG_TCGA-DU-5851-01A-13R-1896-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
preoptic telencephalon	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16115
terete nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.96291
respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.716021
vaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.465723
TNFAIP8L2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00449746
Polyps	DisGeNET Gene-Phenotype Associations	1.0	null
CHL-1	GDSC Cell Line Gene Expression Profiles	1.0	1.47766
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6627
BRD-K56658444	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.97816
orofacial cleft	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.138712
18794137-SuppTable1c	GeneSigDB Published Gene Signatures	1.0	null
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Vehicle Emissions	CTD Gene-Chemical Interactions	1.0	null
BRD-K03063480_PF-477736_MCF10A_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
primary motor-sensory cortex (samples)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.02238
BRD-K88573743_A443654_HME1_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-22-5491-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
bone marrow disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.132052
Mucous gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.345
Pheochromocytoma and Paraganglioma_PCPG_TCGA-PR-A5PF-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CENPE	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0052777
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.0565
TNFRSF12A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00537296
mucoepidermoid carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.886799
BRD-K81418486_vorinostat_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMC6397348__F9	PFOCR Pathway Figure Associations 2023	1.0	null
chr20_33232347_A_C_b38	GTEx eQTL 2025	1.0	2.46088
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.6901
respiratory epithelium	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-A77216878_manumycin A_NCIH1836_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bronchiolitis obliterans	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.25
BRD-K43389698_BMS-387032_HME1_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lung adenocarcinoma_LUAD_TCGA-80-5608-01A-31R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_25 pcw_F_12948	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.14519
had	GeneRIF Biological Term Annotations	1.0	null
BRD-A89434049_SARMENTOGENIN_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RBPJ	ChEA Transcription Factor Targets	1.0	null
granules	GeneRIF Biological Term Annotations	1.0	null
BRD-K51313569_palbociclib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Respiratory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.817
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.8052
PMC9181267-mmc5.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-GSEA_name_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
496100579_HIP_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.91146
BRD-K84073439	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.76637
small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.190476
BRD-A75517195_thiazolopyrimidine_HA1E_24.0_h_40.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE135400_1_v_0_kdm1b_human	RummaGEO Gene Perturbation Signatures	1.0	null
Nasal cavity disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.852
BRD-A94465834	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.30221
HDLM2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.71122
VZ in caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.59018
seneciphylline-2797	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
myoepithelial carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.817565
Bronchiectasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.601
interstitial lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.192657
superficial stratum of r10BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.22001
Bronchial epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.505
layer 2 of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.16294
bacteria	GeneRIF Biological Term Annotations	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.838842
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2298
Stratum basale	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.893
ITPA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00728844
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.72514
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6447
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4804-01A-02R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TSPAN4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00435631
BRD-K42400613	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.81394
BRD-K20798215	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10783
BRD-K96096022	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.18277
HFL-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.553
Rectum adenocarcinoma_READ_TCGA-AH-6903-01A-11R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CRCGN017_MCF10A.TP53.M_24H:G13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.77958
abundant	GeneRIF Biological Term Annotations	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02381
K562	CCLE Cell Line Gene Expression Profiles	1.0	1.5466
Anterolateral visual area, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04452
lateral part of r9B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02669
CRCGN015_MCF10A.TP53.M_24H:J21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.321
FGFBP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00443911
mantle zone of r9BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02768
respiratory mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.2745
BRD-A19037878_trichostatin A_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Somatosensory areas	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.6106
biological_process	GO Biological Process Annotations 2015	1.0	null
performed	GeneRIF Biological Term Annotations	1.0	null
DRD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00568605
HTK	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74467
LTF	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K43205312	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14803
amygdaloid complex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.24499
BRD-K40001470	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09145
nasal polyp	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.30343
culture	GeneRIF Biological Term Annotations	1.0	null
CHAGOK1	CCLE Cell Line Gene Expression Profiles	1.0	1.70668
Gingival epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.785
SNU216	CCLE Cell Line Gene CNV Profiles	1.0	1.52763
sinusitis	GeneRIF Biological Term Annotations	1.0	null
WFDC2	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_11762_KO_Irgm1_ERP020504	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-1.78529
relationship	GeneRIF Biological Term Annotations	1.0	null
intermediate stratum of AStr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1772
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.423054
KDM5A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00422463
Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
intermediate stratum of ITTh	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.51013
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.4537
exposure	GeneRIF Biological Term Annotations	1.0	null
Adenoiditis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.549
CRCGN017_MCF10A.WT.HP_24H:I19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.1849
Tuberomammillary nucleus, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.49296
BRD-K49865102_PD-0325901_HS578T_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-5964-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsolateral prefrontal cortex_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.89676
BRD-K15389388	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.04561
TYKNU	CCLE Cell Line Gene Expression Profiles	1.0	1.6766
BRD-K19734887	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12907
BRD-K49865102_PD-0325901_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Candidiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
BRD-K06926592_Isotretinoin_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.033
Trachea-mucus secreting cell	Tabula Sapiens Gene-Cell Associations	1.0	2.58071
Bronchus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.277
Primary somatosensory area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.67524
FCN3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00497879
Muscle	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Kidney Chromophobe_KICH_TCGA-KN-8421-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Salivary gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.226
Posterior parietal association areas, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09261
skeletal system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Inverted papilloma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.446
bronchoalveolar system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.590036
Palisade parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.298
CD101	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00558339
17297478-SuppTable5	GeneSigDB Published Gene Signatures	1.0	null
tract	GeneRIF Biological Term Annotations	1.0	null
mammalian phenotype	MPO Gene-Phenotype Associations	1.0	null
antimicrobial humoral response	GO Biological Process Annotations 2015	1.0	null
BRD-A62184259_-666_ASC_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A63998256_Helveticoside_A375_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LY75	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00731968
TLR10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00645992
BRD-K85493820_KM 00927_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K00010082	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41698
TRPM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00550866
Primary somatosensory area, mouth, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02199
increased susceptibility to otitis media	MGI Mouse Phenotype Associations 2023	1.0	null
Nasopharyngeal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.167
20460173-ImmPortAntimicrobials	GeneSigDB Published Gene Signatures	1.0	null
Tooth enamel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.787
MCF-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20065
BRD-K78395012	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49944
BRD-K02844551	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13128
modulated	GeneRIF Biological Term Annotations	1.0	null
occipital cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07178
characterization	GeneRIF Biological Term Annotations	1.0	null
BRD-K18623962	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00536
CAL29	CCLE Cell Line Gene CNV Profiles	1.0	1.76058
BRD-K86491317	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37586
superficial stratum of r8BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06067
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.0378
MC-IXC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K36363294_I-BET151_PC3_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
sweat	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.711729
BRD-K26647686	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58332
BRD-A19500257_geldanamycin_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.608
Nasopharyngeal carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.776
pleural	GeneRIF Biological Term Annotations	1.0	null
12917485-Table8	GeneSigDB Published Gene Signatures	1.0	null
BRD-K68202742_trichostatin A_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Posterior parietal association areas, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19843
BRD-A13122391_16-HYDROXYTRIPTOLIDE_EFO27_6.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bed nuclei of the stria terminalis, anterior division, fusiform nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.08931
regulation of sodium ion transmembrane transport	GO Biological Process Annotations 2015	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7603-01A-21R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NHBE cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.129
upper respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.20526
BRD-K94385157	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01494
HCC38	DepMap CRISPR Gene Dependency	1.0	2.27323
BRD-K01806521_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2926
4-aminobutyrate transaminase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.576
superficial stratum of r9BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.69126
primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.29571
XPOT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00629518
BRD-K12929741	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4089
CRCGN015_HEPG2_48H:L03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.34206
BRD-K82919339	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.52536
ML1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.76745
Tracheal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
regulation of symbiosis, encompassing mutualism through parasitism	GO Biological Process Annotations 2015	1.0	null
regulation of single-species biofilm formation	GO Biological Process Annotations 2015	1.0	null
MAGT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00588747
GSE149901_2_v_0_anlotinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.20674
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.13744
KU812	DepMap CRISPR Gene Dependency	1.0	4.86576
TestisGermCell	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.07302
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.388158
r3 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.63557
enhanced	GeneRIF Biological Term Annotations	1.0	null
BRD-A93255169_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.550911
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A184-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Chronic Sinusitis	DisGeNET Gene-Disease Associations	1.0	null
C2BBE1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.824573
BRD-K49328571_dasatinib_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KCNQ5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00649167
layer 1 of AOV cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1464
Allergic asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.488
Neutrophilia	DisGeNET Gene-Disease Associations	1.0	null
retrotrapezoid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37831
muscular system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-K00877314	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61424
CRCGN015_MCF10A.TP53.M_24H:A24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.11995
caudal subdivision of medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.09537
RRM2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00546892
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42601
BRD-K26402831	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06777
BRD-A19500257_geldanamycin_SKMEL28_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K81647247	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2322
GRANTA519	CCLE Cell Line Gene CNV Profiles	-1.0	-2.76016
Rumen epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.627
ADH1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0084838
nodes	GeneRIF Biological Term Annotations	1.0	null
BRD-K49865102_PD-0325901_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Pulmonary Edema	CTD Gene-Disease Associations	1.0	1.07128
salivary gland carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.573828
gastric adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.266558
Primary somatosensory area, lower limb, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-3.08129
GAST	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00703408
BRD-K68185022_Ursolic Acid_LOVO_6.0_h_70.07_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K78469924	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.80846
Vertebrate muscular system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
PLAU	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00775093
Perturb_11854_KO_Fosl2_SRP131329	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.01537
parvocellular part of r8LRt	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.75169
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.378891
BRD-K57080016_selumetinib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K28347985	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.65585
hsa-miR-16	TargetScan Predicted Conserved microRNA Targets	1.0	0.632343
Posterior parietal association areas, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04709
Salivary gland mucoepidermoid carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.191
MTA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00381366
antimicrobial humoral response	GO Biological Process Annotations 2023	1.0	null
NSD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00436098
TAT protein transport complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.554
immune system process	GO Biological Process Annotations 2015	1.0	null
LU65	CCLE Cell Line Gene Expression Profiles	1.0	2.25279
BRD-K14282469_LY-165,163_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K64800655_PHA-793887_HA1E_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K76401790_JNK-IN-5A_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K70936779	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16602
PMC7252250__F4	PFOCR Pathway Figure Associations 2024	1.0	null
BRD-K49328571_dasatinib_MCF10A_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BT-474	COSMIC Cell Line Gene Mutation Profiles	1.0	null
APP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00303084
BRD-K79995507	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.88742
CT45A5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00557062
LIMS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0044038
BRD-K86677819	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07652
Craniosynostosis	DisGeNET Gene-Disease Associations	1.0	null
rostral division of OFCi (area 11)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.946343
Trachea	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
increased inflammatory response	MPO Gene-Phenotype Associations	1.0	null
H3K27me3_megakaryocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ventral tuberomammillary nucleus, superficial part (histaminergic)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09758
BRD-A19500257_geldanamycin_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CSK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00476094
Salivary duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.328
BRD-K19533706_Tranilast_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K61912055	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0112
BRD-K03662481	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60825
BRD-K96778009	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2006
Abnormalities, Drug-Induced	CTD Gene-Disease Associations	1.0	1.03382
CAOV3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.10699
BRD-K40276277	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14117
surfactant homeostasis	GO Biological Process Annotations 2025	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A25Y-01A-11R-A16W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Perturb_14839_KO_Kdm4a_SRP101992	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.55264
BRD-K06593056_-666_THP1_6.0_h_20.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A63998256_Helveticoside_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K07414059	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.00811
TMOD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00543708
FCSK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00882289
response to bacterium	GO Biological Process Annotations 2015	1.0	null
small	GeneRIF Biological Term Annotations	1.0	null
Auditory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.764
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3647
higher	GeneRIF Biological Term Annotations	1.0	null
BRD-K74486276_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMC12129841-10875_2025_1896_MOESM1_ESM.pdf-0-BACH2_BACH2	Rummagene Transcription Factor Associations 2026	1.0	null
HCT8	CCLE Cell Line Gene Expression Profiles	-1.0	-1.95246
lungs	GeneRIF Biological Term Annotations	1.0	null
BRD-K92978173	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41731
BRD-K55916310	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14391
GSE183890_7_v_0_ifitm3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K47510632	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.81191
BRD-K37131263	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29431
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.57258
BRD-K67817697	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.76564
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A67X-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE131425_2_v_3_arg2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
INKA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00709865
regulation of single-species biofilm formation in or on host organism	GO Biological Process Annotations 2025	1.0	null
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.187
tongue epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.221755
BRD-K78431006_crizotinib_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
primary motor cortex (area M1, area 4)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.11782
hsa-miR-4665-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Superior olivary complex, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.62647
Nasopharyngeal Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
iliac artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.24486
polymorphonuclear	GeneRIF Biological Term Annotations	1.0	null
BRD-K11095218	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.85266
BRD-K33272502_DG-041_HA1E_24.0_h_40.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A64761364	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08715
specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.072425
Influenza	DisGeNET Gene-Disease Associations	1.0	null
HTT	ChEA Transcription Factor Targets	1.0	null
COX7A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0064644
common cold	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.987271
correlated	GeneRIF Biological Term Annotations	1.0	null
lamina epithelialis mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.39009
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.919532
BRD-K57009782	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05785
only	GeneRIF Biological Term Annotations	1.0	null
Hypohidrotic ectodermal dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.095
Bed nuclei of the stria terminalis, anterior division, juxtacapsular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15903
superficial part of arcuate nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.71335
BRD-K13390322_AT-7519_HA1E_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K97805186	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25048
High-Grade Salivary Gland Mucoepidermoid Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
CRCGN017_MCF10A.WT.HP_24H:K18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.45645
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	13.9489
PMC11684804-jci-135-174981-s193.xlsx-DESeq2_pseudobulk_AA_Ag_vs_Pre-Gene_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
abnormal respiratory system physiology	MPO Gene-Phenotype Associations	1.0	null
BCPAP	CCLE Cell Line Gene CNV Profiles	1.0	1.59687
ASS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00359424
T-24	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Alveolar epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.635
aureus	GeneRIF Biological Term Annotations	1.0	null
Immune System	Reactome Pathways 2024	1.0	null
hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.058211
Tracheobronchial epithelium	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Oral cavity cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.282
lateral preoptic area, PO1 part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12861
Anterolateral visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.50785
BRD-K22229548	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40704
CD28	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00494685
titanium dioxide_mus musculus_gpl1261_non-pregnant_gds2878	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Thymic medullary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.629
r2 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.20638
BRD-K95016030	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21358
ZBTB32	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9899
Anteroventral periventricular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.76988
cerebellar cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.58418
L33	CCLE Cell Line Gene Expression Profiles	1.0	3.40824
respiratory system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ARHGAP9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00390089
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
gastrointestinal system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.173832
CDR2L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00563
Anterodorsal preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00033
shell part of the anterobasal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.49816
PMC10353540-Table_1.xlsx-HCC1954_AR_vs_HCC1954_A-Gene_Name_AR	Rummagene Transcription Factor Associations 2026	1.0	null
idiopathic interstitial pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.451454
altered susceptibility to bacterial infection	MPO Gene-Phenotype Associations	1.0	null
Sarcoma_SARC_TCGA-DX-A7EO-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Myoepithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.059
lung inflammation	MPO Gene-Phenotype Associations	1.0	null
CLU	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00562351
BRD-K85606544_HKI-272_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
increased interleukin-1 beta secretion	MPO Gene-Phenotype Associations	1.0	null
BRD-K30943140	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10055
nasal cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.854629
BRD-K51017127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60284
CiliaryGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.51166
single-multicellular organism process	GO Biological Process Annotations 2015	1.0	null
posterior intralaminar nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.32417
BBOX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00570885
BRD-A16700644_ISOXSUPRINE HYDROCHLORIDE_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
negative regulation of single-species biofilm formation	GO Biological Process Annotations 2025	1.0	null
MAFF_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DRD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00482605
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.411
sideroblastic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.496175
BRD-K87927290	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22365
BRD-K34604755	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.17436
Precancerous Conditions	CTD Gene-Disease Associations	1.0	1.16203
homeostatic process	GO Biological Process Annotations 2015	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DG-A2KK-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
BRD-K20879770	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.54926
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.88224
Allergic rhinitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.803
BRD-A62809825_-666_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CRCGN017_MCF10A.TP53.M_24H:A16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.17939
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10273
Club cell (Clara cell)_Lung_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
HAGH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00591695
inner CP in midinferior temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.28728
SEMA3A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0073516
HDAC6	ENCODE Transcription Factor Targets	1.0	null
PMC12700831-41594_2025_1680_MOESM4_ESM.xlsx-D9_EC_Hits_2_5FC_CRAPomeFilt-Mapped_Gene_Symbol_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
p27	GeneRIF Biological Term Annotations	1.0	null
CYTH2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00348693
BRD-K61795707	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26694
CRCGN011_HEPG2_24H:D01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.09455
pten	GeneRIF Biological Term Annotations	1.0	null
HEPACAM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00612399
elastase	GeneRIF Biological Term Annotations	1.0	null
RAJI	CCLE Cell Line Gene Expression Profiles	1.0	1.39481
lamellar body	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.318579
information	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-15a	TargetScan Predicted Conserved microRNA Targets	1.0	0.541706
BRD-K30656344	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02667
Liver Diseases	CTD Gene-Disease Associations	1.0	1.24781
NCIH3255	CCLE Cell Line Gene Expression Profiles	-1.0	-1.81638
SEMA4C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00637826
BRD-K40251180	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13882
Zfp809	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.8589
intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064955
ventrolateral prefrontal cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.951546
NOL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0045184
CYSLTR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00597142
Primary visual area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07432
BRD-K41604824	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.33871
superficial stratum of POH	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14744
primary auditory cortex (core)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.855145
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.0308
SNU869	CCLE Cell Line Gene Expression Profiles	1.0	1.66606
CRCGN015_MCF10A.TP53.M_24H:H19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.15625
cleft lip	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.235268
BRD-K81418486_vorinostat_VCAP_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Integument	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.538118
HES6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5527
MYOD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5424
BRD-K78431006_crizotinib_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PCI6A	DepMap CRISPR Gene Dependency	1.0	2.98937
TNFSF13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0046647
IKBIP	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K92571446_WZ-3105_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCIH1734	CCLE Cell Line Gene Expression Profiles	1.0	2.13763
Kidney renal clear cell carcinoma_KIRC_TCGA-CW-5585-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057692
Secretory cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.008
MAFK_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC5967331-41467_2018_4384_MOESM4_ESM.xlsx-Sup_data1_with_CCF_txt-Gene_PITX1	Rummagene Transcription Factor Associations 2026	1.0	null
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.2251
BRD-A61864215	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17245
cerebellum	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.8251
Anteroventral preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.23136
KATOIII	CCLE Cell Line Gene Expression Profiles	1.0	1.35876
transgene	GeneRIF Biological Term Annotations	1.0	null
nose	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.31352
BRD-K53561341_KIN001-220_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HUWE1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0044845
inferolateral temporal cortex (area TEv, area 20)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.827917
GSE65617_5_v_3_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
airway fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.658272
Perturb_11744_KO_Mek2_SRP321493	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.57843
superficial stratum of CA	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.01119
BRD-K70289438	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.007
Stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.032
Cystic fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.507
TRIM28_knockout_301_GSE32224	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.57064
CENPU	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00546366
BAG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00617189
ck19	GeneRIF Biological Term Annotations	1.0	null
BRD-K59369769_tozasertib_HS578T_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K26472648	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.15073
related	GeneRIF Biological Term Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A6B5-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
epithelium	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-A75409952_wortmannin_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
oropharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.65746
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.136
BRD-K44012257	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.65074
short	GeneRIF Biological Term Annotations	1.0	null
innate	GeneRIF Biological Term Annotations	1.0	null
Lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.899
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12511
LTBP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00642389
nasopharynx epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.38688
BRD-K08799216_pelitinib_MDAMB231_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
rt1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.729
Chronic purulent otitis media	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.728
multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
GPX4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00436965
fetal alcohol spectrum disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.416147
BRD-K87419143	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12386
critical	GeneRIF Biological Term Annotations	1.0	null
Alveolus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.779
BRD-K83972459_-666_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K68618894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31729
BRD-K36363294_I-BET151_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NUGC-3	GDSC Cell Line Gene Expression Profiles	-1.0	-1.44116
Oropharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.359
CRCGN016_MCF10A.TP53.M_24H:F13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.38199
SELPLG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.004927
BRD-K66715657	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22919
amygdaloid complex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.879267
Lipid-binding serum glycoprotein, N-terminal	InterPro Predicted Protein Domain Annotations	1.0	null
SARS-dORF6_0Hour_23935999_GSE47962	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.73588
ATRIP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00527492
TFAP2A	ChEA Transcription Factor Targets	1.0	null
BRD-K85606544_neratinib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4925
DPH5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00569855
OLIG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00737755
NCIH1648	DepMap CRISPR Gene Dependency	1.0	4.2443
Contact dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.089
Otitis Media	HuGE Navigator Gene-Phenotype Associations	1.0	null
P12ICHIKAWA	CCLE Cell Line Gene Expression Profiles	1.0	1.52574
BRD-K60052521	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26919
Serous cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.274
HBE cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.397
BRD-K85606544_neratinib_MCF10A_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A90451247_KU-60019_HA1E_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NFATC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00598555
BRD-K42918627_GSK-2126458_MDAMB231_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K75967530	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34969
EBNA2-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
OCUM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04989
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.97
PMC9396374-Table_4.XLSX-AR_related_genes_from_OMIM-gene_symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
increased interleukin-1 beta secretion	MGI Mouse Phenotype Associations 2023	1.0	null
Gastrointestinal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.798
BRD-K88802328	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.68034
response to external biotic stimulus	GO Biological Process Annotations 2015	1.0	null
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.429642
KLHDC7B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00430535
tongue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.09488
Artery - Aorta	GTEx Tissue Gene Expression Profiles 2023	1.0	1.6591
upregulated	GeneRIF Biological Term Annotations	1.0	null
exist	GeneRIF Biological Term Annotations	1.0	null
Extracellular space	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
IDH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0063394
GSE248858_5_v_2_tcpobop_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
negative regulation of single-species biofilm formation in or on host organism	GO Biological Process Annotations 2023	1.0	null
CRCGN013_HEPG2_24H:B13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.52141
ATP8B4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00576958
correlation	GeneRIF Biological Term Annotations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-22-4594-01A-01R-1201-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Periodontal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.367
papillary cystadenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.06816
BRD-K82637883	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.87927
ALAS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00490499
anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23296
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
BRD-A80502530_-666_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
IZ in orbital frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.20149
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.342
possess	GeneRIF Biological Term Annotations	1.0	null
PMC3117129-mp2010119x5.xls-CRS_Amg-Unnamed_5_TWIST1	Rummagene Transcription Factor Associations 2026	1.0	null
TAF1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79062
ROBO3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00527604
glimepiride-2809	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RBPJ-21746931-IB4-LCL-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047929
BRD-K45893504	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40513
Lamina epithelialis mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.629
Perturb_16729_KO_miR301a_SRP131007	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
eggshell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.14432
Perturb_6637_KO_SATB1_ERP024525	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
Infralimbic area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3595
Brain Lower Grade Glioma_LGG_TCGA-DB-A4X9-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CRCGN014_HEPG2_3H:D08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.233
bleomycin_mus musculus_gpl339_gds1492	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
rhinosinusitis	GeneRIF Biological Term Annotations	1.0	null
IgE immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.446
BRD-K49328571_dasatinib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NDUFA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00759043
frequently	GeneRIF Biological Term Annotations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-33-6738-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K90094729	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29354
FTCD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00542753
pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.440914
BRD-K56654013	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09276
BRD-K43620258_3,5-dichloro-2-hydroxy-N-(2-methoxy-5-phenylphenyl)benzenesulfonamide_NCIH1694_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.948962
BRD-K12040459_AT7867_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
particles	GeneRIF Biological Term Annotations	1.0	null
BRD-K49075727_nintedanib_SKBR3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
nasal cavity disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.699517
vitamin e_mus musculus_gpl1261_gse42813	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
periaqueductal gray substance, ventral portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.84169
BRD-K25645002	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06815
Oral epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.195
CRCGN011_HEPG2_24H:H15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.88325
differentiation	GeneRIF Biological Term Annotations	1.0	null
sensory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.062881
BRD-K87023633	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16114
Fibrosis	CTD Gene-Disease Associations	1.0	1.35328
YME1L1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00510984
Perturb_12556_KO_Sirt6_SRP302465	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-1.64585
Central amygdalar nucleus, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.3492
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92201
BRD-A20126139_MEDRYSONE_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Hyperplasia	DisGeNET Gene-Disease Associations	1.0	null
ZNF513	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00721174
STK32C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00568677
BRD-K79768278	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24178
BRD-K42828737_sutent_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K01868942_3-(piperidin-1-yl)propyl-4-amino-5-chloro-2methoxybenzoate . Hydrochloride_HT29_24.0_h_160.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
Carcinoma	CTD Gene-Disease Associations	1.0	1.1122
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9068
H3K27me3_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regulation of biological quality	GO Biological Process Annotations 2015	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HG-A2PA-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ARFGAP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00562322
PMC4382988__F4	PFOCR Pathway Figure Associations 2024	1.0	null
component	GeneRIF Biological Term Annotations	1.0	null
dental caries	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.314278
Skin	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.08783
polymorphic layer of rostral subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.34083
KLHDC8B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00796445
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9319
BRD-K83307202	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03458
BRD-K13662825_dinaciclib_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K03449891_foretinib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
family	GeneRIF Biological Term Annotations	1.0	null
Nr1h4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.4128
BRD-K51313569_palbociclib_MCF7_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.69491
PMC9181267-mmc3.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-orthofinder_human_gene_names_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
malaysian	GeneRIF Biological Term Annotations	1.0	null
parotid gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.510206
POLR2A	ENCODE Transcription Factor Targets	1.0	null
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17792
liver	GTEx Tissue Gene Expression Profiles	-1.0	-0.908454
Perturb_14215_KO_Psen2_SRP254653	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-6.54995
perimammillary part of THyB	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12455
KCNH5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00507545
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7238-11A-01R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Tsu-Pr1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.514
regulation of sodium ion transport	GO Biological Process Annotations 2015	1.0	null
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.051708
HCC202	DepMap CRISPR Gene Dependency	1.0	2.00646
BRD-K81537454	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43265
Primary somatosensory area, lower limb, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-3.66673
Tonsil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.13
BRD-K34747076	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36131
Lung	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.55362
Mucous acinar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.608
TCCSUP	CCLE Cell Line Gene Expression Profiles	-1.0	-2.20347
BRD-K72310865	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.77274
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.838842
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02644
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5094
BRD-A45498368_HY-10044_SKB_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TXNRD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00711143
BRD-K65945126	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05217
digestive	GeneRIF Biological Term Annotations	1.0	null
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
increased susceptibility to bacterial infection	MGI Mouse Phenotype Associations 2023	1.0	null
SLC5A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00508855
Sarcoma_SARC_TCGA-DX-A3UB-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K68330990	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05302
BRD-K72420232_WZ-4002_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
volumes	GeneRIF Biological Term Annotations	1.0	null
NP-69 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.276
hippocampus (hippocampal formation)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.964393
SPIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2995
medial part of MPO	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.54122
contributes	GeneRIF Biological Term Annotations	1.0	null
BRD-K96057608	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21869
Influenza A	DisGeNET Gene-Disease Associations	1.0	null
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.041387
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FA-8693-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF157	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4179
Alveolar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.571
BRD-K69147598	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.68863
epithelium	GeneRIF Biological Term Annotations	1.0	null
BRD-K60219430_-666_NCIH1694_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.27381
ADORA2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00607781
Primary somatosensory area, upper limb, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.00212
CRCGN015_MCF10A.TP53.M_24H:I04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.24963
pituitary	GTEx Tissue Gene Expression Profiles	1.0	1.34971
Mewo	Sanger Dependency Map Cancer Cell Line Proteomics	-1.0	-3.472
BRD-K12184916_-666_U937_6.0_h_0.63_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ASH3	DepMap CRISPR Gene Dependency	1.0	2.88662
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
BRD-K12513721	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49103
Infant, Premature, Diseases	HuGE Navigator Gene-Phenotype Associations	1.0	null
regulation of multi-organism process	GO Biological Process Annotations 2015	1.0	null
BRD-K24047785	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01799
BL2226 (MAPK14)	NURSA Protein Complexes	1.0	null
HOXA5	JASPAR Predicted Transcription Factor Targets	1.0	null
closely	GeneRIF Biological Term Annotations	1.0	null
BRD-K80439500	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.56508
posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.39535
extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
PMC8528285-pbio.3001085.s010.xlsx-Fig_8C-MLX_3T3_MLX	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-A85860691_chaetocin_PC3_6.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.2253
Serine protease inhibitor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.315
BRD-K60623809_SU11652_LOVO_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
layer 4 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.53098
nasopharynx	HPA Tissue Protein Expression Profiles	1.0	1.98601
BL5529 (CCDC99)	NURSA Protein Complexes	1.0	null
FLI1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00617066
Epithelial lining fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.982
OE19	Sanger Dependency Map Cancer Cell Line Proteomics	1.0	2.52498
BRD-K63716942	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.63533
recombinant	GeneRIF Biological Term Annotations	1.0	null
Pharynx cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.066
provide	GeneRIF Biological Term Annotations	1.0	null
MYOM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00538824
Protein body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.711
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054667
etoposide_mus musculus_gpl6887_gse33626	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K63008302	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02052
CRIP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00532086
BRD-K53993775	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07098
SK-MEL-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.44
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8318
rhombomere 11	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00921
Leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.195
HDAC2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MS4A13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0042933
BRD-A02481876_Importazole_HCC15_6.0_h_60.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
REPS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00554641
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.3268
BRD-K18686200	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44026
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6766
layer 1 of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1965
BRD-K52560704_methylstat_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
D-283MED	GDSC Cell Line Gene Expression Profiles	-1.0	-1.60941
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2464
Cystic Fibrosis	DisGeNET Gene-Disease Associations	1.0	null
Goblet cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.081
parietal neocortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.29102
BRD-K38081867	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37695
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.891072
Salivary gland cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.024
BRD-K32722078	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.05723
BRD-K17405621	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.99922
EGFR_druginhibition_82_GSE27638	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.41914
BRD-K56884305	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0211
CRCGN016_MCF10A.WT.HP_24H:F13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.20619
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9132
BRD-K35635390	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46325
Lung adenocarcinoma_LUAD_TCGA-55-8508-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UMC-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RIEG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00814112
HCC1187	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49358
BRD-K12502280_TG101348_HCC15_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7082
BRD-K77935284	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27738
alpha-estradiol-762	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.148
IDO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00541102
bacterial pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.281153
Neoplasm Metastasis	DisGeNET Gene-Phenotype Associations	1.0	null
AK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00522556
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06024
Presubiculum, layer 3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03942
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8676
PMC10273062-JCMM-27-1708-s001.xlsx-Sheet_1-BRCA_AND_UCEC_NOT_CESC_NOT_UCS_NR4A2	Rummagene Transcription Factor Associations 2026	1.0	null
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055352
inhibits	GeneRIF Biological Term Annotations	1.0	null
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.512264
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.5836
vagina	GTEx Tissue Gene Expression Profiles	-1.0	-1.14362
Nasopharynx epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.243
HOXB13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00557316
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.149
lateral mammillary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.80555
S100A8 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.869
response to external stimulus	GO Biological Process Annotations 2015	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-NF-A4WU-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE141726,GSE141733_1_v_0_angiotensin ii_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC12756533-mmc1.pdf-28-L3MBTL3_L3MBTL3	Rummagene Transcription Factor Associations 2026	1.0	null
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.5574
NFKB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0179078
SARS-CoV MA15_Day1-PFU-10^2_None_GSE33266	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-0.937214
BRD-K02581333_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
olfactory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.44506
SRD5A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00650127
5-8F cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.083
r9 part of the inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.56168
BRD-K87261428	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09548
NCOA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00555581
BRD-K50479239	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.10077
heterodimer	GeneRIF Biological Term Annotations	1.0	null
RPL37	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.005842
BRD-K79239947_PF 573228_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung adenocarcinoma_LUAD_TCGA-05-4396-01A-21R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K69840642_HDAC6 inhibitor ISOX_RMUGS_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
palate	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.60624
CLEC4C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00574204
BRD-K49865102_PD-0325901_HCC515_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
germinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.612152
BRD-K44131977	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23196
BRD-K85606544_neratinib_MCF10A_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K76694128_DCC-2036_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SCN4B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00572884
BRD-K95792127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58803
H3K27me3_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Lichen disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.054
protection	GeneRIF Biological Term Annotations	1.0	null
SOAT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00678422
DVL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0033488
BRD-K09560946	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42892
after	GeneRIF Biological Term Annotations	1.0	null
HCC1954	DepMap CRISPR Gene Dependency	1.0	4.76534
Respiratory epithelium	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Lichen planus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.054
governing	GeneRIF Biological Term Annotations	1.0	null
r2 part of trigeminal transition zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.56301
PMC9643473-Table1.xls-MAF_0_005-HGVS_gene_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
TCN1	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K49328571_dasatinib_HCC515_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
er-mitochondrion membrane contact site	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.26445
Medial preoptic nucleus, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.43754
Allergic contact dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.085
primary visual cortex (striate cortex, area V1/17)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.955924
stratum pyramidale of rostral CA3	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.87615
NCCSTCK140	CCLE Cell Line Gene Expression Profiles	-1.0	-2.34982
BRD-K30103771	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.77419
BRD-A35108200_betamethasone_VCAP_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
negatively	GeneRIF Biological Term Annotations	1.0	null
host	GeneRIF Biological Term Annotations	1.0	null
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K02778241	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.33266
chemotherapy	GeneRIF Biological Term Annotations	1.0	null
Corneocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.748
NCI-H2087	GDSC Cell Line Gene Expression Profiles	1.0	1.94106
BRD-K85636571	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.10006
BRD-K18208847	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27509
PMC9643473-Table1.xls-MAF_0_005-Gene_refGeneWithVer_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-A43150328_PENICILLIC ACID_A375_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
mantle zone of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07095
BRD-K02778838	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02383
BRD-K61845512	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18121
Weight Loss	CTD Gene-Disease Associations	1.0	1.30329
Nose	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.074
CLEC4A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00635011
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
BRD-K06611347	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15449
PMC3470785-NIHMS377161-supplement-3.pdf-47-ZNF645_CBLL2	Rummagene Transcription Factor Associations 2026	1.0	null
FADU	GDSC Cell Line Gene Expression Profiles	1.0	2.19836
BRD-A58767537_afatinib_HS578T_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RAB31	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00951118
NDRG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00673046
possible	GeneRIF Biological Term Annotations	1.0	null
BRD-K40645748_mefloquine_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IL13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00614383
HEK 293 T-rex    	BioGPS Cell Line Gene Expression Profiles	1.0	1.10404
RPMI8226	CCLE Cell Line Gene Expression Profiles	1.0	1.38608
CYP20A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00436434
Pseudohypoaldosteronism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.239
Medial geniculate complex, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.13804
BRD-K43390655	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07428
GSE188870,GSE188871_1_v_5_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
clorsulon-1735	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K14019014	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.61845
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.81247
GSE210885_5_v_7_klf4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
superficial stratum of r3Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.01946
degradation	GeneRIF Biological Term Annotations	1.0	null
MCCC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00590581
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048501
Primary visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.22502
CHRNA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00683072
DLAT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00901184
DGUOK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00626683
metastases	GeneRIF Biological Term Annotations	1.0	null
Otorrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
BRD-K53643174	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00189
surface	GeneRIF Biological Term Annotations	1.0	null
HTRA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00444218
TLK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00390599
PADI2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00548209
other	GeneRIF Biological Term Annotations	1.0	null
exocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.17535
BRD-K28559679	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.66836
Midface dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.072
KANK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00621176
adenocarcinoma	GeneRIF Biological Term Annotations	1.0	null
BRD-K24970278	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.47776
ocular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.067869
cea	GeneRIF Biological Term Annotations	1.0	null
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
carcinoma, squamous cell; nasopharyngeal neoplasms	GAD Gene-Disease Associations	1.0	null
mediodorsal nucleus of thalamus_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.08334
BRD-K40175214_torin-1_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
VENTX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32188
Tbx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.5517
RPS6KB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00469431
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.16866
FDCSP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00533686
Nape	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.546
KYSE140	DepMap CRISPR Gene Dependency	1.0	3.67333
Malignant Transformation	DisGeNET Gene-Phenotype Associations	1.0	null
BRD-K55763052	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27531
BRD-K57833824	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18225
OVCA420	COSMIC Cell Line Gene Mutation Profiles	1.0	null
5637	GDSC Cell Line Gene Expression Profiles	-1.0	-1.56461
SMAD9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0148668
BRD-K19237647	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16771
NDC80	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00637547
BRD-K54100199	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.5414
NCI-H508	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KMH2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74258
BRD-A28153253	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17845
BRD-K73730918	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35849
BRD-A92177080_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TRAIP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00635489
BRD-K06203932	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.62723
BRD-K91241684	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.68155
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.058
BRD-A97437073_Rosiglitazone_A549_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SETD1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00452606
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7578
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4834
horizontal nucleus of the diagonal band	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38423
HCC1143	CCLE Cell Line Gene CNV Profiles	1.0	2.36856
MHH-PREB-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
JHU022	DepMap CRISPR Gene Dependency	1.0	3.48906
SOX2	ChEA Transcription Factor Targets	1.0	null
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3982
abnormal tumor necrosis factor secretion	MPO Gene-Phenotype Associations	1.0	null
nonsmall	GeneRIF Biological Term Annotations	1.0	null
SARS-dORF6_24Hour_23935999_GSE47960	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.41015
RNF123	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00560066
RPS6KC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00454209
BRD-K99446825	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25892
layer 6 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24803
TCF25	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00444518
TM6SF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0044416
Carcinogenesis	DisGeNET Gene-Phenotype Associations	1.0	null
BB30HNC	DepMap CRISPR Gene Dependency	1.0	6.73648
sodium	GeneRIF Biological Term Annotations	1.0	null
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02356
Posterior parietal association areas, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23397
Teeth hard tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4321
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.837404
BRD-K79228133	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41965
PDE6B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00527854
LMSU	DepMap CRISPR Gene Dependency	1.0	6.95644
DDIT3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00355292
interleukin-13 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.754
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RC-K8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.94714
Tear gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.961
titanium dioxide_mus musculus_gpl1261_pregnant_gds2878	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K36055864_CYCLOHEXIMIDE_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Opportunistic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.117
extracellular region part	GO Cellular Component Annotations 2015	1.0	null
BRD-K20696416_NVP-AEW541_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mitochondrial membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.124502
BRD-A47816767_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TE1	DepMap CRISPR Gene Dependency	1.0	2.07609
episupraoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1485
E2A	MotifMap Predicted Transcription Factor Targets	1.0	null
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.57062
BRD-K72441510	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0395
increased susceptibility to bacterial infection	MPO Gene-Phenotype Associations	1.0	null
Psp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.015
BRD-K36363294_I-BET151_PC3_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K42558179	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45421
Lung squamous cell carcinoma_LUSC_TCGA-22-4591-01A-01R-1201-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MARS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00473277
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.7032
Lung squamous cell carcinoma_LUSC_TCGA-22-1005-01A-01R-0692-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Otitis Media	DisGeNET Gene-Disease Associations	1.0	null
BRD-K13211965_L-741,742 hydrochloride_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Primary somatosensory area, trunk, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.13076
BRD-K62492257	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58197
BRD-K45746021_CC-401_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Tongue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.35
mantle zone of r10BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04696
Primary visual area, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03028
NINJ1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0095205
BRD-A19500257_geldanamycin_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K09373762	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17079
BRD-K71778797	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09477
goblet cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.769027
Primary visual area, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.14884
EGR1-20690147-ERYTHROLEUKEMIA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
susceptibility	GeneRIF Biological Term Annotations	1.0	null
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059158
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5435
hsa-miR-298	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Lung squamous cell carcinoma_LUSC_TCGA-85-8355-01A-11R-2296-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K66735566	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40648
OSR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9424
Mucous cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.186
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0846
496100388_HIP_probable Alzheimer's disease_no TBI_87_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.26379
Kidney renal papillary cell carcinoma_KIRP_TCGA-B3-4104-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
secreted	GeneRIF Biological Term Annotations	1.0	null
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	60.26
BRD-K79347939	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2753
PIR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00624713
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.13744
BRD-K77625799_vandetanib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
innate immune response	GO Biological Process Annotations 2015	1.0	null
MKN7	CCLE Cell Line Gene CNV Profiles	1.0	2.76596
inhibition	GeneRIF Biological Term Annotations	1.0	null
Germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.588
septopallidal shell area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.21847
GSE138841_0_v_1_trim6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ventrolateral prefrontal cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27518
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.787213
cellular_component	GO Cellular Component Annotations 2015	1.0	null
BRD-K77290793	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.4054
marker	GeneRIF Biological Term Annotations	1.0	null
HNF4	MotifMap Predicted Transcription Factor Targets	1.0	null
MAST3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00635838
BRD-K69073616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31511
regulation of monoatomic cation transmembrane transport	GO Biological Process Annotations 2025	1.0	null
Bed nuclei of the stria terminalis, anterior division, rhomboid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03434
papilloma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.205916
BRD-K46149455	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.46581
Cervicovaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.61
BRD-A85860691_chaetocin_PL21_6.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K59460069_NP-001821_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K29246335	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18331
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3516
Olfactory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.121
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97689
Chronic Rhinosinusitis With Nasal Polyps	DisGeNET Gene-Disease Associations	1.0	null
LENEP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00611433
subcellular	GeneRIF Biological Term Annotations	1.0	null
clara cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.455284
BRD-K91370081_-666_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-FOXA1_FOXA1	Rummagene Transcription Factor Associations 2026	1.0	null
H4K20me1_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.556732
choroid plexus of the fourth ventricle	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.21606
substantianigra	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.84309
Lung squamous cell carcinoma_LUSC_TCGA-66-2783-01A-01R-1201-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K37831546	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20574
TTC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.35869
dorsolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.5253
rhinitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.699517
parasubicular cortex (parasubiculum)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.08332
VEGFC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00529031
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60627
BRD-K09499853_KU 0060648 trihydrochloride_EFO27_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BHLHE40	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00373807
BRD-K53959060_Indirubin-3-oxime_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
surfactant	GeneRIF Biological Term Annotations	1.0	null
Lung adenocarcinoma_LUAD_TCGA-86-8359-01A-11R-2326-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4316	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Nephritis	CTD Gene-Disease Associations	1.0	1.10527
polyps	GeneRIF Biological Term Annotations	1.0	null
NCIH2110	DepMap CRISPR Gene Dependency	1.0	2.56708
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.044
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.838842
hsa-miR-3153	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
concentration	GeneRIF Biological Term Annotations	1.0	null
A549	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.838842
BRD-K98008739	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.3533
female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.052461
BRD-K09951645_dabrafenib_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cytoplasmic membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.064328
abnormal cytokine secretion	MPO Gene-Phenotype Associations	1.0	null
Tumor Cell Invasion	DisGeNET Gene-Phenotype Associations	1.0	null
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.195
Extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
defense	GeneRIF Biological Term Annotations	1.0	null
Lung Diseases	CTD Gene-Disease Associations	1.0	1.55035
BRD-K05001008	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.80973
Exocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.386
pleomorphic adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.384451
BRD-U29336476_-666_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cytoplasmic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.063386
mainolfactoryepithelium.MOE.	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.64768
negative regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
peripheral	GeneRIF Biological Term Annotations	1.0	null
organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.043883
bounding membrane of organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.046654
BRD-K60587793	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10566
Skeletal system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
chlorpropamide-144	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DPP7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00533215
H3K27me3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
kda	GeneRIF Biological Term Annotations	1.0	null
CAS1	DepMap CRISPR Gene Dependency	1.0	4.04557
Mlg	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.665
NOX3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00642114
Inferior olivary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.63805
DOK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.897051
AQP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00717169
Lung squamous cell carcinoma_LUSC_TCGA-56-A5DS-01A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1171	CCLE Cell Line Gene Expression Profiles	-1.0	-1.97066
ARID1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00731254
CTCF_Caco-2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
extracellular space	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
GSE146612_1_v_3_amiodarone_human	RummaGEO Drug Perturbation Signatures	1.0	null
CRCGN010_HEPG2_24H:D11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.1896
pronucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.598538
Pleomorphic adenoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.305
Extrinsic asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.481
GSE188870,GSE188871_4_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
CDH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00831928
Adrenocortical carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.814
GSE146612_2_v_3_amiodarone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K96416345	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.22693
MBNL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00517646
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3521
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.9194
COLO792	CCLE Cell Line Gene Expression Profiles	1.0	1.87805
caused	GeneRIF Biological Term Annotations	1.0	null
Otitis media	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.059
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9669
layer I of piriform cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.9183
BRD-A19500257_geldanamycin_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SALL4-22934838-CD34+-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.063386
BRD-K03063480_PF-477736_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66068
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
bed nucleus of stria terminalis, lateral amygdaloid division	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4161
PMC10353540-Table_1.xlsx-HCC1954_AR_vs_HCC1954_A-ID_AR	Rummagene Transcription Factor Associations 2026	1.0	null
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00351
RGS5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00739075
head	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
ENTHD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00473716
SW620	BioGPS Cell Line Gene Expression Profiles	1.0	2.41625
BRD-K42805893_HG-14-8-02_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K54650634	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0098
SLC9B1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00658709
Bronchiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.002
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.003
NPC	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.757
BRD-K39617634	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17177
BRD-K15588452_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
tracheobronchial epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.516104
Dehydration	DisGeNET Gene-Phenotype Associations	1.0	null
Colorectal Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
molecule	GeneRIF Biological Term Annotations	1.0	null
SIGLEC14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00586589
r10 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06222
Head and neck cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.279
GPI	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00476176
airliquid	GeneRIF Biological Term Annotations	1.0	null
predict	GeneRIF Biological Term Annotations	1.0	null
Primary somatosensory area, lower limb, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.09593
BRD-K05096562	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00562
pseudomonas	GeneRIF Biological Term Annotations	1.0	null
PMC3348545-NIHMS263168-supplement-3.pdf-8-PLAGL2_PLAGL2	Rummagene Transcription Factor Associations 2026	1.0	null
UBQLN4	Hub Proteins Protein-Protein Interactions	1.0	null
SPATA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00808302
PMC5543043-data_sheet_2.xlsx-LPS_MDM_module-Upstream_Regulator_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.1788
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2R7-01A-11R-A18M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A8IL-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
increased interleukin-1 alpha secretion	MGI Mouse Phenotype Associations 2023	1.0	null
RL	CCLE Cell Line Gene Expression Profiles	1.0	1.42798
organelle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045193
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PMC11161988-12906_2024_4523_MOESM3_ESM.pdf-25-MYBL2_MYBL2	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K07278815	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12777
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
hippocampus (hippocampal formation)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.924834
BRD-K51313569_palbociclib_A549_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K64132098	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19799
BRD-K12097074	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.76283
mitochondrial part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.102371
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060739
PDS5A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00490009
CRCGN015_HEPG2_48H:J20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.022
nasal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.32128
H3K27me3_CH12.LX_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF85	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6558
CRCGN013_HEPG2_24H:B17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.7561
BRD-K82224868	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16696
BRD-K00337317_NU-7441_SKBR3_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Mouth	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.556
BRD-A60487173	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05292
oral mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.29673
BRD-K43000271	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21131
Thymic medullary epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.632
12640676-Table3	GeneSigDB Published Gene Signatures	1.0	null
organelle membrane contact site	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.89672
Primary somatosensory area, trunk, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.53221
medial tuberal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.69073
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
JAK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00547177
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	53.4095
BRD-K81949875	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37372
BRD-K81110981	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42855
H2AFZ_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Anterolateral visual area, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.22398
BRD-K01329192	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10661
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048656
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8133
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-A57E-11A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
periventricular stratum of PO2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1601
BRD-K51104732	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01884
posteroventral (inferior) parietal cortex_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.19353
BRD-K50168500_canertinib_SKBR3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K61978712	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0624
BRD-K02715134	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.87925
colchicine-644	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Uterine endometrium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.719
496100290_PCx_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	8.01386
BRD-K63645840	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10662
fibrosis	GeneRIF Biological Term Annotations	1.0	null
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.3365
17510389-Table3	GeneSigDB Published Gene Signatures	1.0	null
ZFAND2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00570238
BRD-K43911180	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20502
SKGIIIA	DepMap CRISPR Gene Dependency	1.0	3.31258
FHL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00501439
BRD-K06049932	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.87584
lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.407919
Primary somatosensory area, upper limb, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.94709
SP in midinferior temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.11
outer SZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.915163
PMC11932929-41388_2024_3264_MOESM4_ESM.xlsx-p_0_05_FC_0_5_n_675-Differentially_expressed_genes_in_MCF7_AR-isolated_BCSCs_after_4_days_GSK591_500nM_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Arsenic	CTD Gene-Chemical Interactions	1.0	null
fluid	GeneRIF Biological Term Annotations	1.0	null
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.13
Particulate Matter	CTD Gene-Chemical Interactions	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-HE-7130-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
salivary gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.413527
type	GeneRIF Biological Term Annotations	1.0	null
Entorhinal area, medial part, dorsal zone, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08914
ventrolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01769
LN-229	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Biofilm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.008
BRD-A36428246	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23832
BRD-K96637326	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.66774
EZH2	ENCODE Transcription Factor Targets	1.0	null
BRD-A56909893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08956
IMR-5	GDSC Cell Line Gene Expression Profiles	-1.0	-1.94037
mitochondrial membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.128538
parasubthalamic nucleus (migrated)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.44731
uterine fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.381379
showed	GeneRIF Biological Term Annotations	1.0	null
GSE158502,GSE158506_3_v_0_fat1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K42805893_HG-14-8-02_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K12955049	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42871
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12306
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.25
Prostate adenocarcinoma_PRAD_TCGA-G9-6347-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.983023
AATK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00718354
BRD-K24178822	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12333
Lung adenocarcinoma_LUAD_TCGA-78-7536-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.096239
SG in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.36901
superficial stratum of PHyB-V	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26786
Suppurative otitis media	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.727
Allergic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.713
MOLM-13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MAFK_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
AZGP1	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K84077642	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47717
abnormal interleukin-1 alpha secretion	MPO Gene-Phenotype Associations	1.0	null
rostral periolivary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.42946
BRD-A19500257_geldanamycin_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Npas2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.1879
Chronic obstructive pulmonary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.007
SNAPC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00495777
Urinary Bladder Neoplasms	CTD Gene-Disease Associations	1.0	1.13827
EDEM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00671012
H3K27me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
Nose disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.057
BRD-A60245366_AS-601245_HEPG2_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mouth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.86513
among	GeneRIF Biological Term Annotations	1.0	null
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
NEK4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00506435
SP in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.21645
intermediate stratum of r2Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.31864
SH10TC	DepMap CRISPR Gene Dependency	1.0	3.47085
CSNK1D	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00685983
LK2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35001
abnormal inflammatory response	MPO Gene-Phenotype Associations	1.0	null
BL2452 (TGFB1I1)	NURSA Protein Complexes	1.0	null
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
response to stress	GO Biological Process Annotations 2015	1.0	null
striatum_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.825312
BRD-K10398797	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.6646
BRD-K17349619_HLI 373_HCC15_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K74842791	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.80782
PMC9643473-Table1.xls-MAF_0_005-Gene_refGenecanonical_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH1373	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51441
CRCGN014_HEPG2_24H:I13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.08935
Wax gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.629
POLR2A_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K06792661_Narciclasine_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
UBQLN4	Pathway Commons Protein-Protein Interactions	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-85-A4JC-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K01296372	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.28806
Axonemal dynein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.109
serous	GeneRIF Biological Term Annotations	1.0	null
BRD-K98519785	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.60616
16-HBE14o cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.675
SLC26A9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00430932
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5677
Lhx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.2349
medial superior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.07463
regulation of transport	GO Biological Process Annotations 2015	1.0	null
BRD-K73479560	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10135
antibacteria	GeneRIF Biological Term Annotations	1.0	null
NOS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00464376
Respiratory Tract Infections	CTD Gene-Disease Associations	1.0	1.08584
HOKUG	DepMap CRISPR Gene Dependency	1.0	2.81933
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.9994
BRD-K10959171	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.36793
VMRCLCD	DepMap CRISPR Gene Dependency	1.0	7.74931
LNZ308	DepMap CRISPR Gene Dependency	1.0	4.75798
primary auditory cortex (core)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.43433
PMC9253713-mmc3.xls-sufu_KD_HCC1954_DEGs-Unnamed_2_AR	Rummagene Transcription Factor Associations 2026	1.0	null
COV413A	DepMap CRISPR Gene Dependency	1.0	3.13944
snoutepidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.13953
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.078154
BRD-K89271983_EMD 41000_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CLDND1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00467511
MANBA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00566729
striatum_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.17886
BRD-K88941096	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49128
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7589
BRD-K59019422_ED_CSC_15_SW620_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
YY1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00608944
CSF3R	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00521794
RUNX2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00489672
regulation of metal ion transport	GO Biological Process Annotations 2015	1.0	null
ATR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00618037
Intracystic papillary adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.11
BRD-K31342827_GF-109203X_NCIH1694_6.0_h_12.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CLIC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00859426
mantle zone of APal	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.32507
BRD-K94801143	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10182
paranasal sinus disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.17421
BRD-K93195215	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50726
NCI-H292	GDSC Cell Line Gene Expression Profiles	1.0	3.60177
INSC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00520265
gata4_16914500_e9dot5_atrioventricular_canal_lof_mouse_gpl1261_gds3663	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.642335
hsa-miR-424	TargetScan Predicted Conserved microRNA Targets	1.0	0.517189
Kidney Chromophobe_KICH_TCGA-KL-8345-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4268
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00351
QPCT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00519268
GSE246195,GSE246305_2_v_5_sin3a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
KIR3DL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00448913
Trachea-serous cell of epithelium of trachea	Tabula Sapiens Gene-Cell Associations	1.0	0.282635
dorsal septopreoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.33706
Stratified epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.928
SU8686	CCLE Cell Line Gene Expression Profiles	1.0	1.35627
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
tioguanine-642	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
intestinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.350372
LN340	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54894
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.6258
GHSR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00939817
CKMT1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00436265
RVH421	CCLE Cell Line Gene CNV Profiles	1.0	1.33053
MAP3K11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00616159
Adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
SALL4	ChEA Transcription Factor Targets	1.0	null
BRD-K80970344_Pyrrolidinedithiocarbamate ammonium_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K33940145	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0202
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4604
Vomeronasal organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.132
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.895907
inferolateral temporal cortex (area TEv, area 20)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.907964
second (ventral) preoptic domain	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.21208
than	GeneRIF Biological Term Annotations	1.0	null
defense response to symbiont	GO Biological Process Annotations 2023	1.0	null
regulation of ion transmembrane transport	GO Biological Process Annotations 2015	1.0	null
Primary somatosensory area, unassigned, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.99417
confer	GeneRIF Biological Term Annotations	1.0	null
PPP6R3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0077471
layer 3 of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07954
SERPINA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00673503
ZKSCAN5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.3616
huh-7	BioGPS Cell Line Gene Expression Profiles	1.0	0.947542
TNNC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00640078
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3902
TGFB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00604292
r10 part of basolateral reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04644
LGALS9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00514938
GATA3	JASPAR Predicted Transcription Factor Targets	1.0	null
Median preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.13649
BRD-A19500257_geldanamycin_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Prostate adenocarcinoma_PRAD_TCGA-FC-A66V-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NBsusSR	GDSC Cell Line Gene Expression Profiles	1.0	1.43543
cerebellar cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.920481
CISD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00720893
ventrolateral preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03685
VZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.49673
B3GAT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00536569
IZ in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.18274
CASP7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00518182
1,5-isoquinolinediol-543	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K97086564	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.45889
specific	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sequences	GeneRIF Biological Term Annotations	1.0	null
maintain	GeneRIF Biological Term Annotations	1.0	null
ENPP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0068371
VZ in dorsolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.16674
Zymogen granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.796
surfaces	GeneRIF Biological Term Annotations	1.0	null
regulate	GeneRIF Biological Term Annotations	1.0	null
Conjunctival epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.775
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.09927
NCR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00787504
NCIH2444	CCLE Cell Line Gene Expression Profiles	1.0	1.8317
VZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.27744
BRD-K36282114	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65492
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11187
BRD-K03116010	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13632
BRD-K70401845_erlotinib_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HEC59	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33028
Basal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.939
G6PC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00573873
BRD-K65182930_NVP-AUY922_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UBE2E2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0063783
hepatocellular	GeneRIF Biological Term Annotations	1.0	null
BRD-K23478508_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCKIPSD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00673519
Atopic dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.098
H3K27me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-A19500257_geldanamycin_MCF7_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
respiratory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.94935
23132/87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.948962
GSE146612_1_v_0_amiodarone_human	RummaGEO Drug Perturbation Signatures	1.0	null
Systemic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.096
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5953
BRD-K61033289_15-Deoxy-?12,14-prostaglandin J2_SKMEL1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
killing	GeneRIF Biological Term Annotations	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
MSMO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00786061
NCI-H2126	GDSC Cell Line Gene Expression Profiles	1.0	1.78035
Staphylococcus Aureus Pneumonia	DisGeNET Gene-Disease Associations	1.0	null
Respiratory mucus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.859
Mafb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.2403
Uterine fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.505
stomach carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.250311
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067733
IGSF3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00857657
medial preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.08162
allergic rhinitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.761047
Serous acinar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.201
salivary duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.369747
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5201-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TBCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15795
CTCF	ENCODE Transcription Factor Targets	1.0	null
RCCFG2	DepMap CRISPR Gene Dependency	1.0	2.28781
BRD-K01554997	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23037
at1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.218
PMC9181267-mmc3.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-GSEA_name_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
AP-2rep	MotifMap Predicted Transcription Factor Targets	1.0	null
BRD-K28953184	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40138
splitomicin-661	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hippocampus (cortex Ammonis)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00959
Infectious Otitis Media	DisGeNET Gene-Disease Associations	1.0	null
CRCGN017_MCF10A.WT.HP_24H:C23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.0954
NCI-H1573	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Learning Disorders	CTD Gene-Disease Associations	1.0	1.46754
inner CP in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.66852
BRD-K37507671	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12025
TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8632
BRD-A58955223_L-sulforophane_DV90_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K73092207	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.46434
Innate Immune System	Reactome Pathways 2024	1.0	null
GOTO	GDSC Cell Line Gene Expression Profiles	-1.0	-1.54184
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A5ZF-01A-11R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JHH-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
UACC812	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56354
MZ in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.934951
CRCGN016_MCF10A.WT.HP_24H:K06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.95901
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.116
PMC9378714-41467_2022_31999_MOESM10_ESM.xlsx-Supplementary_Data_7-Supplementary_Data_7_Collation_of_genes_possible_regulated_or_co-expressed_with_ELF5_ELF5	Rummagene Transcription Factor Associations 2026	1.0	null
IKZF3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00724708
Protease inhibitor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.307
Bhlha15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.5228
PMC9253713-mmc3.xls-sufu_KD_HCC1954_DEGs-Supplementary_Table_2_Differentially_expressed_genes_upon_knockdown_of_SUFU_compared_to_control_in_HCC1954_cells_Related_to_Figure_3_AR	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K78867378_mw-A1-12_THP1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K25931705	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44891
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.167
CRCGN011_HEPG2_24H:K18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.00315
ERMES complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.249
r3 roof plate	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.83416
HSG	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.16284
COVID-19	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
SLC1A7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00536091
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2316
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CM-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
extracellular space	GO Cellular Component Annotations 2015	1.0	null
Dental caries	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.42
SMC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0106717
RDX	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00513061
amygdalo-striatal transition	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.347
roof plate of p2 (epithalamic roofplate)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.52911
salivary gland cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.476201
regulation of transmembrane transport	GO Biological Process Annotations 2015	1.0	null
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.333
pterigoid muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.38581
receptors	GeneRIF Biological Term Annotations	1.0	null
PMC10898041-41065_2024_311_MOESM1_ESM.docx-0-FOXL2_FOXL2	Rummagene Transcription Factor Associations 2026	1.0	null
respiratory system inflammation	MPO Gene-Phenotype Associations	1.0	null
BRD-K28950508	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.32337
cerebellar cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.08861
SC-32856 (RNF14)	NURSA Protein Complexes	1.0	null
BRD-K28375929	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03996
BRD-A85860691_chaetocin_PC3_24.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.2813
AMH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00571348
BRD-K38111331	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01449
layer 1 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.8459
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.186
SRF	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00439209
posterior (caudal) superior temporal cortex (area 22c)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.67644
Pleura	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.061
retinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.117696
PABIR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0079237
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.3016
LDHA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00335526
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071591
Lung squamous cell carcinoma_LUSC_TCGA-90-7767-11A-01R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B2-3923-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hypersensitivity reaction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.045527
aeruginosa	GeneRIF Biological Term Annotations	1.0	null
Submucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.416
Sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.385
CRCGN013_HEPG2_24H:N17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.23757
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.4418
ISG15	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00714052
lung	GeneRIF Biological Term Annotations	1.0	null
Primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
Merocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.781
Short Palate	DisGeNET Gene-Disease Associations	1.0	null
SMAD6	Pathway Commons Protein-Protein Interactions	1.0	null
Interstitial lung disease 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.348
tooth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.065085
Lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.605
BRD-K48488978_YM-201636_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
labetalol-1550	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EVSAT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7484
BRD-K10269761	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11818
primary somatosensory cortex (area S1, areas 3,1,2)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.80081
BRD-K12502280_TG101348_VCAP_24.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GSE188870,GSE188871_1_v_2_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
S100A12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00512988
BRD-K19693607	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.81918
SNU738	CCLE Cell Line Gene CNV Profiles	1.0	1.43316
Antimicrobial peptides	Reactome Pathways 2024	1.0	null
PMC9181267-mmc5.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-hsapiens_homolog_ensembl_gene_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K68174511_torin-2_BT20_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
POLR2A_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
glands	GeneRIF Biological Term Annotations	1.0	null
BRD-K93310782	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.9286
Trachea_CT1_airway submucosal gland collecting duct epithelial cell	HuBMAP ASCT+B Augmented with RNA-seq Coexpression	1.0	null
mitochondrial outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.160658
PCID2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0109408
BRD-K23984367_sorafenib_HME1_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K96154586	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.81467
BRD-K80940089	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09918
Mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.615
SK-MEL-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57343
CDK12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00683194
BRD-K61033289_15-Deoxy-?12,14-prostaglandin J2_PL21_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K47212522	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50874
antimicrobial humoral immune response mediated by antimicrobial peptide	GO Biological Process Annotations 2025	1.0	null
Thymic cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.553
noneosinophilic	GeneRIF Biological Term Annotations	1.0	null
AGS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.838842
mRNA_CDX2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
PMC10170086-41598_2023_34519_MOESM6_ESM.xlsx-Shee2-The_differentially_expressed_genes_between_the_BARX2_high_and_BARX2_low_group_of_LIHC_patients_BARX2	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K37774987	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47454
Interstitial lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.583
Myoepithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.982
superficial stratum of THyB-I	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.66478
regulated	GeneRIF Biological Term Annotations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3363-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cystadenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.248203
Fetal Alcohol Spectrum Disorders	CTD Gene-Disease Associations	1.0	2.88009
BRD-K38097136	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12555
integument	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-K52836380_AZD-7545-A_A549_6.0_h_22.2_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
acinar cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.545093
Lung squamous cell carcinoma_LUSC_TCGA-43-A56U-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of single-species biofilm formation	GO Biological Process Annotations 2023	1.0	null
Amylin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.088
Creb5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.1825
hypersensitivity reaction type i disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.223165
BRD-K14282469_LY-165,163_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
central portion of GPi	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.974718
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057723
GIMAP5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00423468
Ptf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	114.354
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.52754
Nasal vestibule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.901
enac	GeneRIF Biological Term Annotations	1.0	null
RBM47	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00794477
HDAC1	ENCODE Transcription Factor Targets	1.0	null
CHRM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00567332
BRD-K70276322	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.70083
distinguishes	GeneRIF Biological Term Annotations	1.0	null
PMC3879300-pone.0084292.s002.xlsx-SPD_dataset-Gene_symbol_HOXD13	Rummagene Transcription Factor Associations 2026	1.0	null
DARS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.011651
BRD-A23340824	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.53443
abnormal immune serum protein physiology	MPO Gene-Phenotype Associations	1.0	null
Anteromedial visual area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09088
immune	GeneRIF Biological Term Annotations	1.0	null
ACVR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00669333
BRD-K35441510	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05719
evidence	GeneRIF Biological Term Annotations	1.0	null
BRD-A60245366_AS-601245_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mediodorsal nucleus of thalamus_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-3.23855
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047529
BRD-K35324337	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25139
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12306
STX4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00623798
polyp	GeneRIF Biological Term Annotations	1.0	null
SCNN1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00587517
BRD-K35727000	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42724
PMC7064149-CAM4-9-2062-s004.xlsx-Table_S5-Table_S5_DEGs_between_low-_and_high-FOXP4-AS1_expression_groups_in_PDAC_tumor_tissues_FOXP4	Rummagene Transcription Factor Associations 2026	1.0	null
BEN	GDSC Cell Line Gene Expression Profiles	1.0	1.49788
layer 3 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.93348
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.71653
BRD-K97493608	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.64498
BRD-K07551625	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32512
splicing	GeneRIF Biological Term Annotations	1.0	null
ATP5F1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00584096
Kidney Chromophobe_KICH_TCGA-KO-8409-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
transcription	GeneRIF Biological Term Annotations	1.0	null
REL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00763841
Sox3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.9501
NME3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00630667
RAD51C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00352629
Pulmonary fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.071
CDKL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00462218
PPAT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00595789
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	83.2656
primary	GeneRIF Biological Term Annotations	1.0	null
liquid	GeneRIF Biological Term Annotations	1.0	null
PDHA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00659081
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.057507
BRD-K15694916	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60413
BRD-K49328571_dasatinib_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IL17RB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00768996
reproduction	GAD High Level Gene-Disease Associations	1.0	0.293278
BRD-K24907498	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18173
Secretory cell_Lung_Human	CellMarker Gene-Cell Type Associations	1.0	null
RPMI-2650 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.195
CRCGN015_MCF10A.WT.HP_24H:B22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.31301
HCRT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00576604
BRD-K63462027	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65028
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2125
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3653
BRD-K19800225	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30428
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.5894
Brain Lower Grade Glioma_LGG_TCGA-P5-A5F4-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Perturb_13386_OE_p73_SRP069085	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	11.2335
bronchiolitis obliterans	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.31029
NCI-H1437	GDSC Cell Line Gene Expression Profiles	1.0	2.38332
BRD-K04544693	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28671
sialadenitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.482084
BRD-K19411393	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05344
Skeletal muscle	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22326
PMC11833364-tcr-14-01-340-supplementary.pdf-61-EGR1_EGR1	Rummagene Transcription Factor Associations 2026	1.0	null
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K65432894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00117
BRD-K27610371	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51937
dorsolateral prefrontal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.909487
SAEC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.906
BT474	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34253
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9575
Epithelium	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
BRD-K73769678	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.00746
Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV7-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-A19500257_geldanamycin_MCF7_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE205163,GSE205164_3_v_0_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MP-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Paranasal sinus disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.985
A204	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.96267
BRD-A19500257_geldanamycin_HS578T_3_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SP110	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00591442
HTR1D	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00510362
PDCD11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36035
upper	GeneRIF Biological Term Annotations	1.0	null
NIM1K	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00684826
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.851
region	GeneRIF Biological Term Annotations	1.0	null
orbital frontal cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.863085
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1M6-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DPYD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00707892
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6858
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34271
SNU520	CCLE Cell Line Gene Expression Profiles	-1.0	-1.4694
YDJC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00659638
CR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0048078
BRD-K76401790_JNK-IN-5A_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Head and neck squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
mucous cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.08766
IFNA10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00668844
Primary somatosensory area, upper limb, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.39828
CDC25A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00502708
Rumen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.085
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.829274
primary motor cortex (area M1, area 4)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.09883
promoter	GeneRIF Biological Term Annotations	1.0	null
BRD-K40645748_mefloquine_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MBD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00491204
Salivary gland carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.085
BRD-K45399554_CAM-9-027-3_HT115_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
antibacterial humoral response	GO Biological Process Annotations 2025	1.0	null
Plasma membrane respirasome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.853
defense response to bacterium	GO Biological Process Annotations 2025	1.0	null
Intercellular canaliculus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.637
MZ in dorsomedial extrastriate cortex (V2)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.24224
lipids	GeneRIF Biological Term Annotations	1.0	null
Respiratory Tract Diseases	CTD Gene-Disease Associations	1.0	1.10317
PMC7252250__F4	PFOCR Pathway Figure Associations 2023	1.0	null
SNU489	CCLE Cell Line Gene Expression Profiles	-1.0	-2.06937
Influenza	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.635
Secondary Malignant Neoplasm Of Lymph Node	DisGeNET Gene-Disease Associations	1.0	null
PMC9181267-mmc3.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-hsapiens_homolog_associated_gene_name_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
GP9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00529828
TDO2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00555851
BRD-K15160749	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.39537
KCIMOH1	CCLE Cell Line Gene Expression Profiles	1.0	1.38143
BRD-K04833372_GSK-1904529A_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
temporal muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.17047
deep layers of rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.27103
Kidney renal papillary cell carcinoma_KIRP_TCGA-AT-A5NU-01A-11R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tissues	GeneRIF Biological Term Annotations	1.0	null
BRD-K54132860	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4932
TNFSF15	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00595089
plunc	GeneRIF Biological Term Annotations	1.0	null
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.5533
altered susceptibility to infection	MPO Gene-Phenotype Associations	1.0	null
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.667947
SK-OV-3	GDSC Cell Line Gene Expression Profiles	1.0	1.46405
treated	GeneRIF Biological Term Annotations	1.0	null
Alveolar sac	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.778
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.260945
Specific granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.642
P2RX7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00379899
HCC2998	BioGPS Cell Line Gene Expression Profiles	-1.0	-2.83386
H3K27me3_Fetal Heart	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
chemical homeostasis	GO Biological Process Annotations 2015	1.0	null
PSG9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00542964
Medullary thyroid carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.571
mir141	GeneRIF Biological Term Annotations	1.0	null
HTRA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00556219
primary motor cortex (area M1, area 4)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05574
bacteriocidal	GeneRIF Biological Term Annotations	1.0	null
Primary somatosensory area, upper limb, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.87278
CRCGN016_MCF10A.WT.HP_24H:C11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.0933
Tuberomammillary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.57155
CHCHD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00461592
ventromedial preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.30477
light	GeneRIF Biological Term Annotations	1.0	null
Sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.61
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22326
Nasopharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.349
Mucin granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.277
BRD-A80081229	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08478
SNU349	CCLE Cell Line Gene Expression Profiles	-1.0	-1.87657
amygdaloid complex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.26873
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.538209
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4899-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K74677971	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23099
BRD-K96969336	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02277
MEFV	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0052626
sputum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.60893
Premature Birth	CTD Gene-Disease Associations	1.0	1.1529
COV644	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34271
NPBWR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00738719
Ciliopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.389
BRD-A72180425_K784-3188_ASC_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-7784-11A-01R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
biopsies	GeneRIF Biological Term Annotations	1.0	null
HAPLN2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00646554
hippocampus (hippocampal formation)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.38145
mantle zone of PO2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.20996
lunx	GeneRIF Biological Term Annotations	1.0	null
posteroventral (inferior) parietal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.29959
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9817
ethmoid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.49441
Nasopharyngeal Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	1.85468
BRD-K89459607	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.4887
Serous gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.817
Lipid pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.153
Respiratory epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.491
BRD-K47962810	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25762
nose	GeneRIF Biological Term Annotations	1.0	null
functions	GeneRIF Biological Term Annotations	1.0	null
ALDH3B2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00424657
including	GeneRIF Biological Term Annotations	1.0	null
Muscular system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
biological regulation	GO Biological Process Annotations 2015	1.0	null
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15356
Atherosclerosis	CTD Gene-Disease Associations	1.0	1.34694
Chloride channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.118
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.7629
outer SZ in midlateral extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.05236
autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.201635
PLTP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00612917
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-DDIT3_DDIT3	Rummagene Transcription Factor Associations 2026	1.0	null
artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073882
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04745
BRD-K98018160	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03304
BRD-K37277666	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.40529
BRD-K02130563_S1030_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GAS2L3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00561143
HCK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00334688
BRD-K02024244	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38946
intermediate stratum of PO2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.43
shows	GeneRIF Biological Term Annotations	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78597
COX5A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00796937
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.293
BRD-K51577368	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18252
Alveolar epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.485
A-CA-04-2009(H1N1)_Day3_22532695_GSE36328	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-3.068
embryos	GeneRIF Biological Term Annotations	1.0	null
BRD-K23478508_-666_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
suboptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.24836
BRD-K78385490_-666_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
C3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0060722
SCN9A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0101
NADK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00573016
CORL47	DepMap CRISPR Gene Dependency	1.0	6.24613
BRD-K64165176	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37796
Coronavirus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.256
DCLK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00748695
Terminal bronchiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.854
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66068
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.96305
Adrenocortical carcinoma_ACC_TCGA-OR-A5JB-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prdm14	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.3662
distant	GeneRIF Biological Term Annotations	1.0	null
Pituitary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.30399
Middle ear disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.039
layer IIIa of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.19885
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06688
BRD-K07303502_Arachidonyl trifluoro-methyl ketone_HT115_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Caries (Morphologic Abnormality)	DisGeNET Gene-Disease Associations	1.0	null
Nasopharynx carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.11
Mesenterial filament	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.619
diseases	GeneRIF Biological Term Annotations	1.0	null
HSD17B10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00354025
germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.462626
regulation of sodium ion transmembrane transport	GO Biological Process Annotations 2025	1.0	null
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.27
Respiratory bronchiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.808
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5468-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
antimicrobial humoral immune response mediated by antimicrobial peptide	GO Biological Process Annotations 2023	1.0	null
BRD-K84091085_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SIGLEC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00812696
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00351
Respiratory Hypersensitivity	CTD Gene-Disease Associations	1.0	1.07732
fractions	GeneRIF Biological Term Annotations	1.0	null
mesalazine-6162	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cuznsod	GeneRIF Biological Term Annotations	1.0	null
H2369	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RC-01A-11R-A18M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KIT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.020068
BRD-K64742599	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14187
stratum radiatum of caudal CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.5015
BRD-K97183783	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.81392
primary auditory cortex (core)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.996505
Dorsal claustrum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.840236
FOLH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00563212
CRCGN017_MCF10A.WT.HP_24H:M23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0683
BRD-K81473043_-666_DV90_6.0_h_0.35_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
system	GeneRIF Biological Term Annotations	1.0	null
layer 2 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.14989
Alcohol Related Neurodevelopmental Disorder	DisGeNET Gene-Disease Associations	1.0	null
gastric	GeneRIF Biological Term Annotations	1.0	null
Zic1::Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.4155
CATSPER2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00648371
VMRCLCP	CCLE Cell Line Gene Expression Profiles	1.0	2.65491
BRD-K38775274_dexamethasone_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CILP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00707619
BRD-K23051691	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00648
mucous gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.2671
BRD-K88378636_withaferin-a_HCC515_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lung adenocarcinoma_LUAD_TCGA-78-7161-01A-11R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cloning	GeneRIF Biological Term Annotations	1.0	null
Respiratory system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0