association	dataset	threshold value	standardized value
Sertoli cell-only syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.717
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
CRCGN016_MCF10A.TP53.M_24H:K05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	8.3213
Gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.808
SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9846
cytoplasm	LOCATE Curated Protein Localization Annotations	1.0	null
CRCGN017_MCF10A.WT.HP_24H:N22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0539
hsa-miR-1207-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
CRCGN011_HEPG2_24H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.4528
CRCGN017_MCF10A.WT.HP_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.29625
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.967
NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.2048
CRCGN016_MCF10A.WT.HP_24H:A17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.184
CRCGN016_MCF10A.TP53.M_24H:P12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.14965
hsa-miR-4446-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02912
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.917661
CRCGN016_MCF10A.TP53.M_24H:P14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.11423
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0883
496100326_TCx_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.63488
NFYA	JASPAR Predicted Transcription Factor Targets	1.0	null
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.9941
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.11928
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Cystic fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.073
Azoospermia	DisGeNET Gene-Disease Associations	1.0	null
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.759
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.7586
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14226
IM-95M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18994
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.975408
ubiquitinprotein	GeneRIF Biological Term Annotations	1.0	null
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.8916
PMC7825356-8844261.f3.docx-107-TGIF2LY_TGIF2LY	Rummagene Transcription Factor Associations 2026	1.0	null
RORB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3639
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02912
CRCGN016_MCF10A.TP53.M_24H:P20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.47306
CRCGN014_HEPG2_24H:F21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.76014
CRCGN014_HEPG2_24H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.808
Hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.377
CRCGN010_HEPG2_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.12747
CRCGN017_MCF10A.TP53.M_24H:K23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.1643
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37538
CRCGN014_HEPG2_24H:A03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.63558
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14226
spermatogonia	GeneRIF Biological Term Annotations	1.0	null
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4572
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9964
CRCGN014_HEPG2_24H:A16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.68485
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.065
SNAI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8672
CRCGN016_MCF10A.TP53.M_24H:P18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.25004
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.973048
46,XX sex reversal	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.606
Supporting cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.507
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4527
intracellular membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
496100314_HIP_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.31026
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
hect	GeneRIF Biological Term Annotations	1.0	null
496100657_FWM_probable Alzheimer's disease_no TBI_82_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.88475
CRCGN015_MCF10A.TP53.M_24H:B10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.4173
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.35035
Testicular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.701
CRCGN012_HEPG2_24H:G05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.79923
Autosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.762
496100587_FWM_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.64216
CRCGN014_HEPG2_3H:N12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.30168
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.95166
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1195
hypospermatogenesis	GeneRIF Biological Term Annotations	1.0	null
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
PPARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.4286
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.312
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7772
Gonadoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.145
PAX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3488
nucleus	LOCATE Curated Protein Localization Annotations	1.0	null
CRCGN014_HEPG2_3H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.0044
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30747
Olfactory placode	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.695
CRCGN014_HEPG2_24H:A17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.19214
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.95954
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855278
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18994
hsa-miR-4701-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
CRCGN009_HEPG2_24H:H15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.4281
cSARS Bat SRBD_30Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.62614
ZNF816	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.944
CRCGN010_HEPG2_24H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.6722
interacts	GeneRIF Biological Term Annotations	1.0	null
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0753
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9973
ZBTB11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5165
spermatocytes	GeneRIF Biological Term Annotations	1.0	null
round	GeneRIF Biological Term Annotations	1.0	null
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4193
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.973935
Spermatogenic failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.919
CLOCK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5255
CRCGN016_MCF10A.WT.HP_24H:N15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.1897
weakly	GeneRIF Biological Term Annotations	1.0	null
CRCGN009_HEPG2_24H:K13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.8188
CRCGN011_HEPG2_24H:I07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.20265
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.8989
CRCGN015_MCF10A.TP53.M_24H:L09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.06965
CRCGN017_MCF10A.WT.HP_24H:N16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.70515
COLO-704	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28208
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02912
Male infertility due to globozoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.687
Spermatocytoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.392
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17255
Disorder of sexual development	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.873
Pelvic varices	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.688
CRCGN009_HEPG2_24H:L13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	10.0
HPAF-II	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.861371
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8351
hsa-miR-200b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
CRCGN013_HEPG2_24H:N04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.62945
Epididymosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.528
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.5164
KMS-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10731
M059J	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26453
496100372_HIP_dementia_no TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	9.09546
PAX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.823
CRCGN012_HEPG2_24H:K01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.0225
testicular	GeneRIF Biological Term Annotations	1.0	null
ATF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.03
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34656
CRCGN017_MCF10A.TP53.M_24H:A13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.08208
CRCGN015_MCF10A.TP53.M_24H:M07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.5244
ATF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1891
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.973048
DMRTA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.1269
CRCGN008_HEPG2_24H:I13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0362
Persistent Mullerian duct syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.88
CRCGN015_MCF10A.WT.HP_24H:B10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.62704
CRCGN015_MCF10A_48H:C19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.09077
CRCGN014_HEPG2_3H:L01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.05353
Spindle pole body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.219
Synaptonemal complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.867
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0726
CRCGN017_MCF10A.TP53.M_24H:K03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.4131
CRCGN016_MCF10A.TP53.M_24H:O15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.33824
CRCGN012_HEPG2_24H:M13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.38791
CRCGN017_MCF10A.TP53.M_24H:M04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.11034
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.973935
FOSB::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.7809
DU-145 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.327
OLIG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.581
hsa-miR-583	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18994
Chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.548
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
CRCGN014_HEPG2_24H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.0074
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3446
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
CRCGN015_MCF10A_48H:B10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.322
icSARS CoV_24Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.64279
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02912
CRCGN015_MCF10A.TP53.M_24H:C07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.2944
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.52828
CRCGN010_HEPG2_24H:D11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.4432
hsa-miR-3192	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
hsa-miR-4727-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Sertoli cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.625
TFEC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9449
SW 48	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56175
Vas deferens	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.671
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.880838
hsa-miR-657	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919411
CRCGN015_MCF10A_48H:M07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.92065
intracellular organelle	LOCATE Curated Protein Localization Annotations	1.0	null
hsa-miR-211	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
Complete androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.061
Y-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.631
Vomeronasal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.775
Inhibin B complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.394
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.376
hsa-miR-3187-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
MCF 10A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67001
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.8922
arrest	GeneRIF Biological Term Annotations	1.0	null
CRCGN016_MCF10A.TP53.M_24H:D05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.932
PMC10247733-41408_2023_863_MOESM2_ESM.pdf-43-BNC1_BNC1	Rummagene Transcription Factor Associations 2026	1.0	null
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
PMC10794847-mmc3.xlsx-PBRM1_KD_down-Table_S2_Differentially_expressed_genes_with_PBRM1_knockdown_in_the_differentiation_state_Related_to_Figure_2_AR	Rummagene Transcription Factor Associations 2026	1.0	null
LCLC-103H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21445
Axonemal dynein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.639
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.742
hsa-miR-508-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9734
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.7937
hsa-miR-4455	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.331
Androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14226
Oligoasthenoteratozoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.726
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1722
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15635
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9347
CRCGN008_HEPG2_24H:G04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.13965
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.391
Embryonal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.006
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.05254
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.95394
Primary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.454
CL-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
CRCGN017_MCF10A.TP53.M_24H:N02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.8312
hsa-miR-885-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02912
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
G59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905918
TC-71	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.95166
Spermatid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.63
CRCGN011_HEPG2_24H:N02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.046
ligase	GeneRIF Biological Term Annotations	1.0	null
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2739
BHLHA15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.297
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.153
hsa-miR-892a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67001
CRCGN011_HEPG2_24H:A09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.66185
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47083
hsa-miR-4495	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
RUNX2	ChEA Transcription Factor Targets	1.0	null
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.861371
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.805
Synaptonemal structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.86
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9501
NCI-H2722	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905526
496100505_TCx_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.4306
SK-N-SH	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47083
Kartagener syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.212
NKX2-8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7828
CRCGN011_HEPG2_24H:C22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.7418
HNF4A	JASPAR Predicted Transcription Factor Targets	1.0	null
Male Infertility	DisGeNET Gene-Phenotype Associations	1.0	null
CRCGN008_HEPG2_24H:F01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0412
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905918
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28208
Seminiferous tubule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.734
Semen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.257
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.905
Reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.672
CRCGN011_HEPG2_24H:L12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.6902
CRCGN012_HEPG2_24H:G02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.34769
vcy2	GeneRIF Biological Term Annotations	1.0	null
UKE-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.95954
follicle-stimulating hormone complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.545
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9975
Axonemal outer doublet	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.695
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.027
496100319_HIP_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.59547
888	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47083
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.285
CRCGN016_MCF10A.WT.HP_24H:K09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.65707
Ejaculatory duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.166
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Gynecomastia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.268
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32204
Orchitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.53
Outer dense fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.872
Gonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.081
specimens	GeneRIF Biological Term Annotations	1.0	null
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21805
CRCGN015_HEPG2_48H:P06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.47401
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5969
CRCGN015_MCF10A_48H:J16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.7574
GATA3	JASPAR Predicted Transcription Factor Targets	1.0	null
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855278
CRCGN015_MCF10A_48H:H22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.84645
hsa-miR-335-5p	MiRTarBase microRNA Targets	1.0	null
MTF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7131
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4615
PE/CA-PJ15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855278
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28208
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13003
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
SU-DHL-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
NCI-H847	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15635
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.857
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5487
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3091
CRCGN017_MCF10A.TP53.M_24H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.20262
CRCGN015_MCF10A.WT.HP_24H:O11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.8361
NCI-H2126	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.880838
ZNF692	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.347
Chromosomal duplication syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.684
Ribonuclease P complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.94
CRCGN016_MCF10A.TP53.M_24H:F11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.2074
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.156
hsa-miR-200c	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
Klinefelter syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.231
CRCGN011_HEPG2_24H:L03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.9165
CRCGN011_HEPG2_24H:D11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.8358
CRCGN015_MCF10A_48H:P06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.28907
OLIG3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9265
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5114
CRCGN008_HEPG2_24H:C11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.17515
Azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.998
nucleus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
OCI-AML3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67001
CREM	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.3651
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	84.6203
Y-linked spermatogenic failure 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.879
Mixed gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.54
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.11386
Pituitary gonadotropin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.436
Inhibin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.169
CRCGN011_HEPG2_24H:H15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.5531
Spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.833
CRCGN016_MCF10A.WT.HP_24H:C07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.29694
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.9297
CRCGN014_HEPG2_24H:C01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.16309
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
Vein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.289
maturation	GeneRIF Biological Term Annotations	1.0	null
NCI-H2023	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.862296
Testicular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.541
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29375
membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.467
Oligospermia	DisGeNET Gene-Disease Associations	1.0	null
Sperm flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.182
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8191
NFKB1	JASPAR Predicted Transcription Factor Targets	1.0	null
Male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.942
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905918
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.356
hsa-miR-4792	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2842
Seminal plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.907
Spermatogenic failure 9	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.688
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.4607
Euchromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.529
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2546
NCI-H2369	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905918
CRCGN017_MCF10A.TP53.M_24H:L22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.94512
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	84.6289
hsa-miR-4755-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
immunonegative	GeneRIF Biological Term Annotations	1.0	null
Pseudohermaphroditism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.64
COLO 206F	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.902377
hsa-miR-589	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
496100281_HIP_probable Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.42429
CRCGN016_MCF10A.TP53.M_24H:K10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.22941
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.166
CRCGN011_HEPG2_24H:O05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.38785
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08493
Varicose veins	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.501
Testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.19
CAL 54	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02912
RKO-E6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.975408
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.9424
SW 982	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56332
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.737
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.0195
Cryptorchidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.82
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.0491
496100491_HIP_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.64588
Spermatogonium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.753
hsa-miR-4279	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
ZBED1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.7752
hsa-miR-204	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21705
MOR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.17377
USF2	JASPAR Predicted Transcription Factor Targets	1.0	null
Varicocele	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.82
Progressive leukoencephalopathy with ovarian failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.143
NKX2-4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9068
Scrotum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.28
CRCGN016_MCF10A.TP53.M_24H:A17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.01889
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36922
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
CRCGN014_HEPG2_24H:F03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.0198
CRCGN016_MCF10A.TP53.M_24H:D15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.08671
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4155
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1328
Sperm head	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.956
Leydig cell hypoplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.503
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.7267
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.862296
biopsy	GeneRIF Biological Term Annotations	1.0	null
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.263
Seminal vesicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.116
ATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.856
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
Primary ciliary dyskinesia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.083
Sperm midpiece	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.672
intracellular part	LOCATE Curated Protein Localization Annotations	1.0	null
spermatids	GeneRIF Biological Term Annotations	1.0	null
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.969
CRCGN017_MCF10A.WT.HP_24H:E04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.44929
e3a	GeneRIF Biological Term Annotations	1.0	null
Gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.158
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.66
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.0534
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1906
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.553
CRCGN016_MCF10A.WT.HP_24H:D07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.2246
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18994
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.973935
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.5637
Hypospadias	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.315
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.183
hsa-miR-3130-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.861371
Hypogonadotropic hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.428
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828554
SU-DHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.880838
Congenital bilateral absence of vas deferens	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.019
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.9834
Turner syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.353
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34656
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1611
CRCGN016_MCF10A.TP53.M_24H:P24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.3283
microbody	LOCATE Predicted Protein Localization Annotations	1.0	null
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1144
Germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.168
Acrosomal vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.298
496100548_HIP_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.92017
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42876
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1927
ATOH7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7344
CRCGN015_MCF10A_48H:O11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.546
Oligospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.428
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
CRCGN014_HEPG2_24H:H18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0692
CRCGN011_HEPG2_24H:G14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.8334
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.95166
Sperm flagellum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.873
NEUROG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.0949
hsa-miR-4482	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
CRCGN011_HEPG2_24H:M13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.9608
CRCGN012_HEPG2_24H:G01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.45611
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
CRCGN014_HEPG2_3H:B08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.7892
CRCGN014_HEPG2_24H:K02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.47375
CRCGN014_HEPG2_24H:A20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.43664
MEIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.3354
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.1348
peroxisome	LOCATE Predicted Protein Localization Annotations	1.0	null
hsa-miR-1286	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
hsa-miR-4693-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
organelle	LOCATE Curated Protein Localization Annotations	1.0	null
CRCGN013_HEPG2_24H:H01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.63011
Breast Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Kallmann syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.406
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08493
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.297
OV56	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0385
CRCGN009_HEPG2_24H:M19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.7619
CRCGN016_MCF10A.TP53.M_24H:L10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.00763
HCC1482	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8149
MDA-MB-435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38925
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2788
Seminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.191
Spermatozoon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.588
CRCGN017_MCF10A.TP53.M_24H:K20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.91791
NKX2-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8602
hsa-miR-429	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
CRCGN013_HEPG2_24H:O01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.8775
TFAP2A	JASPAR Predicted Transcription Factor Targets	1.0	null
CL-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0385
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-623	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6179
GP5D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67001
hsa-miR-122	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
CRCGN012_HEPG2_24H:I12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.13448
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.168
CRCGN016_MCF10A.TP53.M_24H:H08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.0102
Leydig cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.02
W chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.536
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.2028
CREB3L4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6941
CRCGN016_MCF10A.WT.HP_24H:P22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.691
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9087
CRCGN012_HEPG2_24H:J21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.14149
CW-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90037
MT-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17018
CRCGN014_HEPG2_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.701
cell part	LOCATE Curated Protein Localization Annotations	1.0	null
CRCGN016_MCF10A.TP53.M_24H:H09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.03495