association	dataset	threshold value	standardized value
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
Bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.264
BL2784 (PARK7)	NURSA Protein Complexes	1.0	null
Viscus	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Arteriole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.379
Brain microvascular endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.75
fh15	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.683
GTEX-W5WG-0006-SM-3GIJT	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.917999
BL1111 (CENPF)	NURSA Protein Complexes	1.0	null
hepg2	HPA Cell Line Gene Expression Profiles	1.0	1.53867
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.66188
GTEX-O5YT-1326-SM-3MJGR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.88031
GTEX-O5YV-1126-SM-3LK73	GTEx Tissue Sample Gene Expression Profiles	1.0	1.16869
GI-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-S4P3-1126-SM-4AD52	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.853942
Spinal cord	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.85
PMC8446806__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Movement Disorders	CTD Gene-Disease Associations	1.0	1.1122
BL5021 (CHD1)	NURSA Protein Complexes	1.0	null
PMC4252624__F6	PFOCR Pathway Figure Associations 2023	1.0	null
EM2	CCLE Cell Line Gene CNV Profiles	1.0	2.09776
OPM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.903089
PMC7997388__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BL7063 (CHUK)	NURSA Protein Complexes	1.0	null
BL6680 (SETD7)	NURSA Protein Complexes	1.0	null
multicenter	GeneRIF Biological Term Annotations	1.0	null
PMC7161485__F1	PFOCR Pathway Figure Associations 2023	1.0	null
BL2617 (EIF2AK4)	NURSA Protein Complexes	1.0	null
BL2126 (HDAC3)	NURSA Protein Complexes	1.0	null
Hepatitis B	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.894
Plague	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.327
mutants	GeneRIF Biological Term Annotations	1.0	null
GTEX-NPJ8-0007-SM-2D7VX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.67122
Retinal disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Lymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.144
immune-complex glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.602
interstitial lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.067125
PMC8444148-NIHMS1529754-supplement-1529754_Tab_S2.xlsx-downregulated_in_ATF4OE-RNA-seq_of_C3_ATF4_OE_and_C3_neurons_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
candida	GeneRIF Biological Term Annotations	1.0	null
GTEX-S33H-1626-SM-4AD68	GTEx Tissue Sample Gene Expression Profiles	1.0	1.49725
Fc receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.935
SC-67022 (SPDEF)	NURSA Protein Complexes	1.0	null
lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046505
Cerebrovascular Disorders	HuGE Navigator Gene-Phenotype Associations	1.0	null
GSE238018_3_v_4_mxra8_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-TML8-1926-SM-32QOS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04799
PMC5095001-oncotarget-07-36293-s002.xlsx-Table_S2-Table_S2_MYCN-correlated_genes_and_their_correlations_with_other_transcription_factors_MYCN	Rummagene Transcription Factor Associations 2026	1.0	null
STAT1-17558387-HELA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
cell-cell junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.126466
eye and adnexa disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.06788
BL3821 (KDM3B)	NURSA Protein Complexes	1.0	null
GTEX-XMK1-0226-SM-4B65D	GTEx Tissue Sample Gene Expression Profiles	1.0	1.31018
BL1042 (AGAP1)	NURSA Protein Complexes	1.0	null
PMC8827490__F1	PFOCR Pathway Figure Associations 2024	1.0	null
pathogenic	GeneRIF Biological Term Annotations	1.0	null
thrombotic	GeneRIF Biological Term Annotations	1.0	null
BL322 (MLH1)	NURSA Protein Complexes	1.0	null
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.131
PMC3140475__F5	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-PW2O-0006-SM-2I3DV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.995675
PMC8567138-Table_2.xlsx-Sheet1-IGFBP5_AND_IGFBP7_NOT_IGFBP3_NR4A2	Rummagene Transcription Factor Associations 2026	1.0	null
Disseminated intravascular coagulation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.807
pioglitazone_rattus norvegicus_gpl341_liver_gds3850	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PMC5260963__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Demyelinating polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.293
GTEX-PX3G-0826-SM-48TZS	GTEx Tissue Sample Gene Expression Profiles	1.0	2.00559
Schizophrenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.151
GSE223893_2_v_10_setd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.662336
Blood protein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.328
observed	GeneRIF Biological Term Annotations	1.0	null
Sudden Infant Death Syndrome	DisGeNET Gene-Disease Associations	1.0	null
Aspergillosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.047
BL2381 (TAOK1)	NURSA Protein Complexes	1.0	null
Thrombophilia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.521
Endocarditis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.391
BL1007 (WAPAL)	NURSA Protein Complexes	1.0	null
Chronic Periodontitis	DisGeNET Gene-Disease Associations	1.0	null
Saliva	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.652
Non-alcoholic Fatty Liver Disease	CTD Gene-Disease Associations	1.0	1.15425
GSE202434,GSE202438_13_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ss95	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.631
ESR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9295
SC-28241 (MGMT)	NURSA Protein Complexes	1.0	null
substance-related disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.012
AB81 (BRCA1)	NURSA Protein Complexes	1.0	null
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-OIZH-2626-SM-2HMJM	GTEx Tissue Sample Gene Expression Profiles	1.0	0.872494
H3K36me3_erythroblast_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-R55F-0005-SM-2TF4W	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.72005
SC-14031 (FOXH1)	NURSA Protein Complexes	1.0	null
GTEX-XLM4-1026-SM-4AT51	GTEx Tissue Sample Gene Expression Profiles	1.0	1.13044
Male urethra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.869
15459177-Table1	GeneSigDB Published Gene Signatures	1.0	null
Measles	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.609
Immunoglobulin complex, circulating	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.27
mediodorsal nucleus of thalamus_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.2279
realtime	GeneRIF Biological Term Annotations	1.0	null
Carcinoma	CTD Gene-Disease Associations	1.0	1.07589
PMC12119775-13402_2024_1033_MOESM1_ESM.pdf-11-JUN_JUN	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-Q2AH-1026-SM-48TZI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00425
PMC2866657-pone.0010547.s003.xls-ERG_corr-Genes_correlated_anticorrelated_to_ERG_ERG	Rummagene Transcription Factor Associations 2026	1.0	null
gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
SIDS Susceptibility Pathways(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
PMC4682646__F1	PFOCR Pathway Figure Associations 2023	1.0	null
a-ATM (Ab-3) (ATM)	NURSA Protein Complexes	1.0	null
EPI-1759-1 (CYTH3)	NURSA Protein Complexes	1.0	null
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.763
JQ007 (MSH6)	NURSA Protein Complexes	1.0	null
Skin mucus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.809
Nectary	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.687
Schizophrenia	DisGeNET Gene-Disease Associations	1.0	null
PMC3551738__F3	PFOCR Pathway Figure Associations 2024	1.0	null
BL1688 (MAD1L1)	NURSA Protein Complexes	1.0	null
PMC9171628__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Mitral valve prolapse	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.199
PMC5427104__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Neuromyelitis optica	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.11549
BL6476 (EEF2K)	NURSA Protein Complexes	1.0	null
cyp21a2	GeneRIF Biological Term Annotations	1.0	null
Rheumatoid Arthritis	DisGeNET Gene-Disease Associations	1.0	null
Potocki-Shaffer syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.44
factors	GeneRIF Biological Term Annotations	1.0	null
Pulmonary artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.497
Phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.524
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.066
A2058	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00932
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.195
Cerebral white matter	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.903
intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047875
Mesangium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.65
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.369
BL2769 (PRMT2)	NURSA Protein Complexes	1.0	null
women	GeneRIF Biological Term Annotations	1.0	null
GTEX-T6MO-0126-SM-4DM6X	GTEx Tissue Sample Gene Expression Profiles	1.0	1.57671
C32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.37546
Capillary	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.076
NCIH1299	CCLE Cell Line Gene CNV Profiles	1.0	1.33259
hematopoietic system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
a-HCV4 ()	NURSA Protein Complexes	1.0	null
X-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.096
Calcitonin family receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.922
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23177
BL1780 (C21orf7)	NURSA Protein Complexes	1.0	null
production	GeneRIF Biological Term Annotations	1.0	null
GTEX-PW2O-1726-SM-2S1OO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.916031
GTEX-QVJO-0006-SM-2S1RC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.87929
IGKV1-5	Pathway Commons Protein-Protein Interactions	1.0	null
BL2805 (UBR5)	NURSA Protein Complexes	1.0	null
B-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.232
Japanese encephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.155
Presynaptic active zone cytoplasmic component	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.318
Mitral valve insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.038
GF1-26923725-CHIP-SEQ-HPCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Nose disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.32
negative	GeneRIF Biological Term Annotations	1.0	null
Arteriosclerotic cardiovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.758
synucleinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.135553
BL2763 (HNRNPU)	NURSA Protein Complexes	1.0	null
Coronavirus disease - COVID-19	KEGG Pathways 2026	1.0	null
Integral component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.799
Buccal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.675
GTEX-S4Z8-0726-SM-4GICB	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04069
chain	GeneRIF Biological Term Annotations	1.0	null
Head kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.078
C1 inhibitor deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.513
rp2	GeneRIF Biological Term Annotations	1.0	null
GTEX-O5YT-1626-SM-32PK6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.26711
Endomysium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.006
GSE186440,GSE186443_2_v_5_daxx_human	RummaGEO Gene Perturbation Signatures	1.0	null
PMC8948659-ADVS-9-2104491-s013.xlsx-Sheet1-Supplemental_Table_9_related_to_Figure_7_Differential_genes_highly_correlated_with_TP53_deletion_in_H929_cells_by_RNA-seq_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
mediodorsal nucleus of thalamus_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.945902
GTEX-X5EB-0006-SM-46MV5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.44861
PMC2955136__F4	PFOCR Pathway Figure Associations 2023	1.0	null
bp86	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.23
GSE233548_2_v_0_plscr1_human	RummaGEO Gene Perturbation Signatures	1.0	null
BL7041 (NFKB2)	NURSA Protein Complexes	1.0	null
PMC4451739__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Gastroenteritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
GTEX-RU72-1426-SM-46MUF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.49745
PMC11756367-peerj-13-18820-s001.xls-SP1-Target_SP1	Rummagene Transcription Factor Associations 2026	1.0	null
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.84118
Optic nerve disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
GTEX-RU1J-1726-SM-2TF5S	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.24645
SNAI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7786
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.073
saliva	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Familial temporal lobe epilepsy 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.652
18223198-Table5	GeneSigDB Published Gene Signatures	1.0	null
BL4941 (TRIM3)	NURSA Protein Complexes	1.0	null
PMC6206158__F1	PFOCR Pathway Figure Associations 2023	1.0	null
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9244
HOXC9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.965
BL464 (AHCYL2)	NURSA Protein Complexes	1.0	null
Ulcerative colitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.898
BL3121 (SMEK1)	NURSA Protein Complexes	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.07517
Corpus callosum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.306
amygdaloid complex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.922299
BL7968 (ZAK)	NURSA Protein Complexes	1.0	null
BL4102 (PRMT6)	NURSA Protein Complexes	1.0	null
PMC2780838__F1	PFOCR Pathway Figure Associations 2023	1.0	null
finnish	GeneRIF Biological Term Annotations	1.0	null
plasma	GeneRIF Biological Term Annotations	1.0	null
survival	GeneRIF Biological Term Annotations	1.0	null
C1QA	Pathway Commons Protein-Protein Interactions	1.0	null
Lymphadenitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.28
BL1115 (CENPJ)	NURSA Protein Complexes	1.0	null
Common variable immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.288
PMC4300866__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Disease of cellular proliferation	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
BL2755 (LCOR)	NURSA Protein Complexes	1.0	null
BL1536 (TREX1)	NURSA Protein Complexes	1.0	null
age	GeneRIF Biological Term Annotations	1.0	null
CAL-12T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.858794
BL2989 (RBBP7)	NURSA Protein Complexes	1.0	null
PMC10247733-41408_2023_863_MOESM4_ESM.pdf-574-ZSCAN1_ZSCAN1	Rummagene Transcription Factor Associations 2026	1.0	null
predispose	GeneRIF Biological Term Annotations	1.0	null
BL1656 (SMG1)	NURSA Protein Complexes	1.0	null
NR2C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	87.2758
Plasma cell	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
BL5022 (CHD1)	NURSA Protein Complexes	1.0	null
BL897 (MTOR)	NURSA Protein Complexes	1.0	null
GTEX-SN8G-1526-SM-4DM79	GTEx Tissue Sample Gene Expression Profiles	1.0	0.843367
Perivascular astrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.674
Fc-gamma receptor I complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.948
disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.654067
Macular degeneration	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Encephalomyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.554
Myelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.115
BL810 (PRKAA2)	NURSA Protein Complexes	1.0	null
Integrin alpha4-beta7 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.548
BL1003 (ATF7IP)	NURSA Protein Complexes	1.0	null
GTEX-WEY5-2326-SM-3GIKK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.10031
Bone inflammation disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
E2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6078
Overnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.578
PMC11383936-41598_2024_71738_MOESM6_ESM.xlsx-DEPs_LMS_vs_HC-Unnamed_4_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
PMC5019180__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Sporozoan form	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.264
anchoring junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.136332
GTEX-XUJ4-1326-SM-4BOQ9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19714
Cardiomyopathies	CTD Gene-Disease Associations	1.0	1.19607
GTEX-X4EP-0011-R2B-SM-3P625	GTEx Tissue Sample Gene Expression Profiles	1.0	0.914691
hsa-miR-4726-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
GMS-10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BL6413 (BCOR)	NURSA Protein Complexes	1.0	null
disease of anatomical entity	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.610138
16166618-SuppTable4	GeneSigDB Published Gene Signatures	1.0	null
Colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.32
Pseudopodium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.819
incidence	GeneRIF Biological Term Annotations	1.0	null
Optic nerve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.47
GTEX-V955-0126-SM-4JBH5	GTEx Tissue Sample Gene Expression Profiles	1.0	1.49934
diagnosis	GeneRIF Biological Term Annotations	1.0	null
Mononuclear phagocyte	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
manifested	GeneRIF Biological Term Annotations	1.0	null
BL8104 (AHDC1)	NURSA Protein Complexes	1.0	null
JQ021 (CCAR1)	NURSA Protein Complexes	1.0	null
Ciliary pocket	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.158
GTEX-TML8-1826-SM-32QOR	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.14486
GTEX-TSE9-0626-SM-3DB8B	GTEx Tissue Sample Gene Expression Profiles	1.0	0.826769
BL840 (UBE2A)	NURSA Protein Complexes	1.0	null
GSE146687_2_v_5_eribulin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Plasmodium falciparum malaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.001
BL697 (CC2D1A)	NURSA Protein Complexes	1.0	null
bone marrow cell	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
neuronal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.679433
gcn	GeneRIF Biological Term Annotations	1.0	null
demonstrated	GeneRIF Biological Term Annotations	1.0	null
Myocardial Infarction	DisGeNET Gene-Disease Associations	1.0	null
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.892
GSE184087_4_v_5_tert_human	RummaGEO Gene Perturbation Signatures	1.0	null
Disease by infectious agent	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.894
Follicular dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.9
cytokine	GeneRIF Biological Term Annotations	1.0	null
G11911BT	GlyGen Glycosylated Proteins	1.0	null
u266	HPA Cell Line Gene Expression Profiles	1.0	1.01826
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.880358
correlation	GeneRIF Biological Term Annotations	1.0	null
PMC12120114-41525_2025_502_MOESM1_ESM.pdf-713-ENSG00000171634_BPTF	Rummagene Transcription Factor Associations 2026	1.0	null
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cob	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.985
single-stranded DNA-binding protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.042
PMC10769395-media-2.xlsx-S2D_EF_Repressed_genes-Ebegboni_et_al_Supplemental_Table_S2D_Increased_expression_following_depletion_of_EWSR1_FLI1_TC-32_TC-71_and_A673_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
beta-N-acetylhexosaminidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.554
developing	GeneRIF Biological Term Annotations	1.0	null
GTEX-XV7Q-0226-SM-4BRVL	GTEx Tissue Sample Gene Expression Profiles	1.0	2.67332
Severe COVID-19	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.557
Age related macular degeneration	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
PMC4716143__F3	PFOCR Pathway Figure Associations 2023	1.0	null
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18671
GTEX-PLZ5-0326-SM-3P614	GTEx Tissue Sample Gene Expression Profiles	1.0	1.36568
GTEX-XUJ4-2626-SM-4BOQ3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.10676
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
ischemic bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.255241
baclofen_mus musculus_gpl1261_gse17266	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
dorsal thalamus_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.00731
BL2709 (FANCD2)	NURSA Protein Complexes	1.0	null
Fallopian tube disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.283
GTEX-S341-0126-SM-4AD64	GTEx Tissue Sample Gene Expression Profiles	1.0	1.57758
Morbilliform Drug Reaction	DisGeNET Gene-Disease Associations	1.0	null
sevoflurane_homo sapiens_gpl570_gds2772	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-RUSQ-0226-SM-47JWT	GTEx Tissue Sample Gene Expression Profiles	1.0	1.40546
SC-6243 (TP53)	NURSA Protein Complexes	1.0	null
CEBPB-20176806-THIOMACROPHAGE-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
GTEX-OHPM-0006-SM-2HMKU	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.30849
BL2385 (ERCC4)	NURSA Protein Complexes	1.0	null
thyroid	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.935002
uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.545481
BL2438 (PUS1)	NURSA Protein Complexes	1.0	null
acrosomal membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.613742
GTEX-PSDG-0005-SM-3GADC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.989086
extracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
GSE109565_12_v_11_glyphosate_human	RummaGEO Drug Perturbation Signatures	-1.0	null
orbital frontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05683
cytoplasmic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.050109
PMC12775252-18_2025_5991_MOESM3_ESM.xlsx-Sheet1-Supplementary_Table_2_Up-_and_down-regulated_genes_in_TCF7L2-depleted_EVT_compared_to_control_EVT_TCF7L2	Rummagene Transcription Factor Associations 2026	1.0	null
CBC2031 (ZMYND8)	NURSA Protein Complexes	1.0	null
BL4048 (USP32)	NURSA Protein Complexes	1.0	null
fertilizedegg	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.27208
BL1578 (MCM8)	NURSA Protein Complexes	1.0	null
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.707
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928975
BL6983 (ZBTB40)	NURSA Protein Complexes	1.0	null
GTEX-RTLS-0006-SM-2TF58	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.27135
PMC11383936-41598_2024_71738_MOESM6_ESM.xlsx-DEPs_LMS_vs_LMS_-_vs_HC-Unnamed_4_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
crohn's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.175411
CBC702 (PALLD)	NURSA Protein Complexes	1.0	null
GSE211262,GSE211263_2_v_1_pbrm1_human	RummaGEO Gene Perturbation Signatures	1.0	null
TGIF2LY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1756
prp	GeneRIF Biological Term Annotations	1.0	null
GTEX-S32W-1226-SM-4AD67	GTEx Tissue Sample Gene Expression Profiles	1.0	1.17804
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
dorsal thalamus_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.0809
Retinal degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.182
GTEX-R53T-0326-SM-48FEC	GTEx Tissue Sample Gene Expression Profiles	1.0	2.23819
Meningococcal meningitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.606
GTEX-POMQ-0008-SM-48TE7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.894753
b92	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.574
OACM5-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC3632731__F1	PFOCR Pathway Figure Associations 2024	1.0	null
reported	GeneRIF Biological Term Annotations	1.0	null
HOXB9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4211
SC-28748 (TGFB1I1)	NURSA Protein Complexes	1.0	null
BL8731 (MLLT1)	NURSA Protein Complexes	1.0	null
c2c12	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.902398
molt4	HPA Cell Line Gene Expression Profiles	-1.0	-1.01539
BL4172 (NCRNA00153)	NURSA Protein Complexes	1.0	null
BL2379 (RFWD3)	NURSA Protein Complexes	1.0	null
interleukin-12 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.526
CPZ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39658
changes	GeneRIF Biological Term Annotations	1.0	null
BL4565 (KIF1B)	NURSA Protein Complexes	1.0	null
bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042424
Macroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.196
GSE183113_1_v_0_sorafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Metaplasia	CTD Gene-Disease Associations	1.0	1.05015
Reproductive system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.945
Nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.606
BL9062 (CDC6)	NURSA Protein Complexes	1.0	null
suppressing	GeneRIF Biological Term Annotations	1.0	null
GTEX-PWCY-0005-SM-33HBP	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.54587
Rheumatic Heart Disease	DisGeNET Gene-Disease Associations	1.0	null
Cingulate cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.076
BL7814 (ARHGEF11)	NURSA Protein Complexes	1.0	null
reproducible	GeneRIF Biological Term Annotations	1.0	null
Steroid inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.874
Petal	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.751
GSE135030_11_v_0_fludarabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
mRNA_ASCL2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
Disease of anatomical entity	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Germinal center	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.495
lymphocytes	GeneRIF Biological Term Annotations	1.0	null
Other source	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.256
BL7613 (IQWD1)	NURSA Protein Complexes	1.0	null
GTEX-Q2AI-0226-SM-48U1D	GTEx Tissue Sample Gene Expression Profiles	1.0	2.15391
PMC10260721-43657_2023_100_MOESM10_ESM.xlsx-MR_for_neuro-traits_FDR_0_05-Gene_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
plateletrich	GeneRIF Biological Term Annotations	1.0	null
Lens disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.28
GTEX-Q734-0126-SM-48U1E	GTEx Tissue Sample Gene Expression Profiles	1.0	1.93172
BL1352 (FUS)	NURSA Protein Complexes	1.0	null
PMC7456869__F5	PFOCR Pathway Figure Associations 2023	1.0	null
PMC11982601-IMM-175-84-s005.xlsx-Fig5D_LPS-Innate_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-XV7Q-0326-SM-4BRVM	GTEx Tissue Sample Gene Expression Profiles	1.0	1.1876
PMC7904891__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BL5036 (CHD8)	NURSA Protein Complexes	1.0	null
Intervertebral disc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.373
HS 255.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.940465
Proliferative glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.489
Cervical cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
establish	GeneRIF Biological Term Annotations	1.0	null
GTEX-WFG7-1626-SM-4LVMF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.12041
GTEX-QDVN-1626-SM-48TZC	GTEx Tissue Sample Gene Expression Profiles	1.0	1.15055
Parasitic protozoa infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.993
mbl2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.177
Empyema fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.54
effect	GeneRIF Biological Term Annotations	1.0	null
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.221378
BL4546 (HMG20B)	NURSA Protein Complexes	1.0	null
BL2265 (DOCK9)	NURSA Protein Complexes	1.0	null
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.01509
PMC2704572__F2	PFOCR Pathway Figure Associations 2023	1.0	null
CBC602 (RAD18)	NURSA Protein Complexes	1.0	null
GTEX-QLQ7-0726-SM-2I5G2	GTEx Tissue Sample Gene Expression Profiles	1.0	1.30206
GTEX-TKQ1-1426-SM-4GICK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.25692
Adrenal Gland Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
Heart disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.798
PMC6433978__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Granulocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.417
Oral sucker	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.552
Cholestasis	CTD Gene-Disease Associations	1.0	1.40036
PMC3551738__F3	PFOCR Pathway Figure Associations 2023	1.0	null
PMC6940904__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC7456869__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Thylakoid	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.473
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-A_ATF4-def_vs_HCT116_ctrl-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.545868
Complement component 2 deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.534
Systemic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.485
isoforms	GeneRIF Biological Term Annotations	1.0	null
15656903-SuppTable1	GeneSigDB Published Gene Signatures	1.0	null
BL6090 (PHC3)	NURSA Protein Complexes	1.0	null
BL1546 (DYRK2)	NURSA Protein Complexes	1.0	null
BL1821 (IRF3)	NURSA Protein Complexes	1.0	null
Outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.92
PMC9102653__F2	PFOCR Pathway Figure Associations 2024	1.0	null
vascular endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066619
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.428
asianindians	GeneRIF Biological Term Annotations	1.0	null
BL4237 (PPP2R1A)	NURSA Protein Complexes	1.0	null
Cyclic Neutropenia	DisGeNET Gene-Disease Associations	1.0	null
SC-28746 (HEY1)	NURSA Protein Complexes	1.0	null
BL6346 (ATF2)	NURSA Protein Complexes	1.0	null
Uterine cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
GSE184087_0_v_1_tert_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF708	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.3298
Allergic disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.963
BL5722 (ZNF830)	NURSA Protein Complexes	1.0	null
hepatic	GeneRIF Biological Term Annotations	1.0	null
CAMA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40304
Nephrotic syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.737
Respiratory failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.599
GTEX-S4Q7-0526-SM-4AD5N	GTEx Tissue Sample Gene Expression Profiles	1.0	0.886174
kidney_b	HPA Tissue Sample Gene Expression Profiles	1.0	1.10771
Perturb_3686_KD_RARRES2_SRP287866	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-9.00623
containing	GeneRIF Biological Term Annotations	1.0	null
PMC4727420__F2	PFOCR Pathway Figure Associations 2024	1.0	null
auditory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.060218
lavage	GeneRIF Biological Term Annotations	1.0	null
c3b	GeneRIF Biological Term Annotations	1.0	null
BL1825 (TAOK3)	NURSA Protein Complexes	1.0	null
GTEX-WHSB-1626-SM-3LK6J	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01592
REH	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BL3841 (KDM5B)	NURSA Protein Complexes	1.0	null
PPP2R2D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20969
GSE246335_1_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Amastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.179
domains	GeneRIF Biological Term Annotations	1.0	null
GSE135030_11_v_10_fludarabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Neural retina	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.172
adherens junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.139306
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.31291
t60-adrenal_female_8w	MoTrPAC Rat Endurance Exercise Training	-1.0	-1.46916
BL2602 (MED24)	NURSA Protein Complexes	1.0	null
MNT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5617
Disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.613
lat1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.931
neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.375179
Focal segmental glomerulosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.19
primary biliary cirrhosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.639463
HES1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12083
NCI-H520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00602
BL2230 (FIGNL1)	NURSA Protein Complexes	1.0	null
BL4464 (CEP170)	NURSA Protein Complexes	1.0	null
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.33944
BL7558 (UPF1)	NURSA Protein Complexes	1.0	null
GSE261563_3_v_1_atrx_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-T6MN-0126-SM-32PLP	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.18234
GTEX-Q2AH-0126-SM-48U2B	GTEx Tissue Sample Gene Expression Profiles	1.0	2.24528
SPOTS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.922
carried	GeneRIF Biological Term Annotations	1.0	null
cleaves	GeneRIF Biological Term Annotations	1.0	null
HOG cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.765
ifnbetainduced	GeneRIF Biological Term Annotations	1.0	null
Great saphenous vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.187
endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
GSE242333_0_v_2_sorafenib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Musculoskeletal system disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
BL2843 (MED12)	NURSA Protein Complexes	1.0	null
Glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.356
Bone marrow cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
lupus erythematosus	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
skin	GTEx Tissue Gene Expression Profiles	-1.0	-0.91292
gonorrhoeae	GeneRIF Biological Term Annotations	1.0	null
isolated	GeneRIF Biological Term Annotations	1.0	null
Meningitis	DisGeNET Gene-Disease Associations	1.0	null
BL6227 (PBXIP1)	NURSA Protein Complexes	1.0	null
BL3131 (PPP2CB)	NURSA Protein Complexes	1.0	null
RAJI cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.118
BL2693 (PRMT1)	NURSA Protein Complexes	1.0	null
Retinal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.071
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.65056
GTEX-XUJ4-0726-SM-4BOOP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.05454
Amylin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.008
hepatocytes	GeneRIF Biological Term Annotations	1.0	null
GTEX-X638-0326-SM-47JY1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.874876
BL436 (NCOA2)	NURSA Protein Complexes	1.0	null
infarction	GeneRIF Biological Term Annotations	1.0	null
deceased	GeneRIF Biological Term Annotations	1.0	null
GTEX-OXRK-0626-SM-2HMJ5	GTEx Tissue Sample Gene Expression Profiles	1.0	0.962891
PMC5711528__F2	PFOCR Pathway Figure Associations 2023	1.0	null
19204204-SupplementaryTable2	GeneSigDB Published Gene Signatures	1.0	null
IgM immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.762
rccx	GeneRIF Biological Term Annotations	1.0	null
BL4974 (USP20)	NURSA Protein Complexes	1.0	null
BL5913 (NUCKS1)	NURSA Protein Complexes	1.0	null
Microneme	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.646
GTEX-NL4W-0006-SM-2I3GH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04039
CBC2202 (RXRB)	NURSA Protein Complexes	1.0	null
Metabolic dysfunction-associated steatotic liver disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.869
Cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.921
COR-L26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18587
imatinib_homo sapiens_gpl96_gds3048	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SIU7-1126-SM-2XCDW	GTEx Tissue Sample Gene Expression Profiles	1.0	1.4048
GTEX-QLQW-0005-SM-2S1RA	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.16778
BL1114 (CENPH)	NURSA Protein Complexes	1.0	null
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.57949
pulmonary	GeneRIF Biological Term Annotations	1.0	null
VAPB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3698
NCIN87	CCLE Cell Line Gene CNV Profiles	-1.0	-1.66028
C1S	Pathway Commons Protein-Protein Interactions	1.0	null
GTEX-OOBJ-0008-SM-3NB26	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.964897
Panuveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.14
IGLC6	Pathway Commons Protein-Protein Interactions	1.0	null
Innate Immune System	Reactome Pathways 2024	1.0	null
B cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.353
BL4839 (WDHD1)	NURSA Protein Complexes	1.0	null
PMC2866657-pone.0010547.s001.xls-ERG-high-GENES_UPREGULATED_IN_ERGhigh_ERG	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-UJMC-0008-SM-4IHKK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.5272
SC-9118 (PDPK1)	NURSA Protein Complexes	1.0	null
BL2367 (KIAA0528)	NURSA Protein Complexes	1.0	null
Vein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.483
Mastitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.002
GTEX-PSDG-0226-SM-33HC1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.03665
BL2204 (STK3)	NURSA Protein Complexes	1.0	null
Hematopoietic system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
Fatty Liver	CTD Gene-Disease Associations	1.0	2.04254
BL1826 (TAOK3)	NURSA Protein Complexes	1.0	null
Brain microvascular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.804
BL5987 (ZNF318)	NURSA Protein Complexes	1.0	null
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7979
Perturb_2849_Mut_NFE2L2_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
fh14	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.633
GSE109565_12_v_4_glyphosate_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC8789288-elife-73137-supp3.xlsx-Gene_List_Comparisons-Supplementary_file_3_Comparison_of_genes_induced_by_IRF1_or_IFNg_with_genes_in_the_type_II_ISG_screen_library_IRF1	Rummagene Transcription Factor Associations 2026	1.0	null
poor	GeneRIF Biological Term Annotations	1.0	null
creb1_22108299_heart_left_ventricle_lof_mouse_gpl1261_gds3660	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.065351
Nerve Degeneration	CTD Gene-Disease Associations	1.0	1.44817
PMC9039621__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Ciliary pocket collar	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.547
GTEX-VJWN-0005-SM-3GIKF	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.986344
PMC2882188__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Retinal degeneration	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
resistance	GeneRIF Biological Term Annotations	1.0	null
Lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.655
BL2221 (COL4A3BP)	NURSA Protein Complexes	1.0	null
Necrotizing fasciitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.314
GTEX-RWSA-0005-SM-2XCAO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.8965
GTEX-S4Z8-0526-SM-4AD4T	GTEx Tissue Sample Gene Expression Profiles	1.0	2.1642
19204204-SupplementaryTable5	GeneSigDB Published Gene Signatures	1.0	null
GTEX-QCQG-0008-SM-48U2G	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.950472
Impetigo	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.408
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.712
possibe	GeneRIF Biological Term Annotations	1.0	null
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.879653
Oral epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.66
Aedesalbopictus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.738
PMC6435069__F1	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-RWSA-0726-SM-2XCBE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.474
PMC9181267-mmc4.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-GSEA_name_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
Myelocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.577
posterior uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.766759
demonstrate	GeneRIF Biological Term Annotations	1.0	null
BL5495 (RAD18)	NURSA Protein Complexes	1.0	null
Hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.92
Amyloid plaque	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.804
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
PMC2727911__F1	PFOCR Pathway Figure Associations 2024	1.0	null
19204204-SupplementaryTable3	GeneSigDB Published Gene Signatures	1.0	null
TP53-18474530-U2OS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Muscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.462
significance	GeneRIF Biological Term Annotations	1.0	null
Type VI protein secretion system complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.595
Meninx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.363
Autoimmune disease of gastrointestinal tract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.528
G59626AS	GlyGen Glycosylated Proteins	1.0	null
syndrome	GeneRIF Biological Term Annotations	1.0	null
Membranoproliferative glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.083
DLX1_02_55	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61604
Glomerular endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.371
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8248
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23141
Cryoglobulinemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.621
Cpa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.664
crucial	GeneRIF Biological Term Annotations	1.0	null
BL1689 (MAD1L1)	NURSA Protein Complexes	1.0	null
Conjunctiva	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.981
GTEX-RM2N-0526-SM-2TF4N	GTEx Tissue Sample Gene Expression Profiles	1.0	0.852941
BL2460 (DDX17)	NURSA Protein Complexes	1.0	null
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.930179
PMC4268817-13059_2014_551_MOESM3_ESM.xls-Sig_change_all__10_tsv-Additional_file_3_List_of_genes_with_signficant_expression_changes_in_any_of_the_KD_conditions_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Atypical hemolytic-uremic syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.862
post	GeneRIF Biological Term Annotations	1.0	null
Rubella	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
Viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.317
BL5118 (PAK1)	NURSA Protein Complexes	1.0	null
detection of external biotic stimulus	GO Biological Process Annotations 2025	1.0	null
ZKSCAN5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.3297
GSE200982_0_v_2_plac8_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SF126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
site	GeneRIF Biological Term Annotations	1.0	null
osteonecrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.300173
Diabetes	DisGeNET Gene-Disease Associations	1.0	null
Anterior uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.052
Asthma	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.9
acute	GeneRIF Biological Term Annotations	1.0	null
PMC7969890__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BL2273 (TCF12)	NURSA Protein Complexes	1.0	null
BL7432 (ZNF326)	NURSA Protein Complexes	1.0	null
BL4670 (PPP2R5D)	NURSA Protein Complexes	1.0	null
Plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.717
Penicillamine	CTD Gene-Chemical Interactions	1.0	null
BL4912 (PML)	NURSA Protein Complexes	1.0	null
PMC11668092-12884_2024_7077_MOESM1_ESM.xlsx-Table_S2-Table_S2_Full_result_of_MR_estimates_for_the_association_between_druggable_genes_and_HG_based_on_Finngen_study_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
value	GeneRIF Biological Term Annotations	1.0	null
GSE189336_1_v_0_nitric oxide_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-T5JC-0005-SM-4DM7B	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.90372
BL1799 (BCL11B)	NURSA Protein Complexes	1.0	null
496100566_FWM_no dementia_no TBI_82_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.26624
Hyperglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.154
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5411
intermediate-density lipoprotein particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.609
Extrinsic cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.306
states	GeneRIF Biological Term Annotations	1.0	null
GSE226249_0_v_3_pirfenidone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.589
Alcoholic liver disease	KEGG Pathways 2026	1.0	null
mRNA_RHOX6_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
H3K4me1_kidney_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157F_vs_MSX1-Gene_id_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
NA cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.736
Bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.255
PMC8610101__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Optic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.303
MYCN-19997598-NEUROBLASTOMA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
BL1326 (FOXO3)	NURSA Protein Complexes	1.0	null
possible	GeneRIF Biological Term Annotations	1.0	null
GTEX-SIU7-0526-SM-3NM8I	GTEx Tissue Sample Gene Expression Profiles	1.0	0.845117
G62765YT	GlyGen Glycosylated Proteins	1.0	null
GTEX-REY6-0626-SM-2TF4G	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14242
SK-MEL-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.981222
Feeling worry	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.752288
C1QB	Pathway Commons Protein-Protein Interactions	1.0	null
major	GeneRIF Biological Term Annotations	1.0	null
blood	GeneRIF Biological Term Annotations	1.0	null
accessibility	GeneRIF Biological Term Annotations	1.0	null
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13845
G80223IX	GlyGen Glycosylated Proteins	1.0	null
BL3720 (KDM4B)	NURSA Protein Complexes	1.0	null
precise	GeneRIF Biological Term Annotations	1.0	null
Periodontitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.328
BL8105 (AHDC1)	NURSA Protein Complexes	1.0	null
PMC9163386__F6	PFOCR Pathway Figure Associations 2024	1.0	null
autism	GAD Gene-Disease Associations	1.0	null
Kna	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.05
PMC4143352__F5	PFOCR Pathway Figure Associations 2024	1.0	null
BL8814 (MTUS1)	NURSA Protein Complexes	1.0	null
EA-18-FP00_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	-1.0	-0.212591
Heavy chain immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.526
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02489
BL587 (FEN1)	NURSA Protein Complexes	1.0	null
mRNA_NR5A2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
PMC6335266__F1	PFOCR Pathway Figure Associations 2023	1.0	null
DSH1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-V1D1-0226-SM-4JBHG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.35627
Urinary system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.833
Parasitic helminthiasis infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.168
PMC11408518-41598_2024_73146_MOESM5_ESM.xlsx-Intersection_gene-NCOA1_NCOA1	Rummagene Transcription Factor Associations 2026	1.0	null
Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.1122
imatinib_homo sapiens_gpl96_gds3044	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
used	GeneRIF Biological Term Annotations	1.0	null
GTEX-QDVJ-1326-SM-48U1X	GTEx Tissue Sample Gene Expression Profiles	1.0	0.946691
membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.051207
Blood plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.816
GTEX-QDVJ-0826-SM-48U1S	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09881
Chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.229
Cerebral lobe	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.015
lupus erythematosus	GAD Gene-Disease Associations	1.0	null
SC-66857 (DCLK1)	NURSA Protein Complexes	1.0	null
NPY5R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35807
Liver	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
cerebrovascular	GeneRIF Biological Term Annotations	1.0	null
capillary	GeneRIF Biological Term Annotations	1.0	null
BE-03-XC62_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.32505
GTEX-PLZ4-0006-SM-2S1NY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.02938
Myocardial Infarction	HuGE Navigator Gene-Phenotype Associations	1.0	null
deaths	GeneRIF Biological Term Annotations	1.0	null
CBC31 (POLDIP3)	NURSA Protein Complexes	1.0	null
Glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.341
LU-99A	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Peripheral nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.699
Systemic lupus erythematosus	KEGG Pathways 2026	1.0	null
Trypanosomoid form	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.495
GTEX-SUCS-0002-SM-3NMAJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07296
BL2466 (NCOA7)	NURSA Protein Complexes	1.0	null
GTEX-R55C-0005-SM-3GAE9	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.4768
GSE203429_0_v_1_angptl8_human	RummaGEO Gene Perturbation Signatures	1.0	null
PMC5783486__F4	PFOCR Pathway Figure Associations 2024	1.0	null
positive regulation of phagocytosis	GO Biological Process Annotations 2023	1.0	null
individuals	GeneRIF Biological Term Annotations	1.0	null
Prostasome	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.569
Sickle cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.121
platelets	GeneRIF Biological Term Annotations	1.0	null
methylprednisolone_rattus norvegicus_gpl85_gds965	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
G22310AV	GlyGen Glycosylated Proteins	1.0	null
Immunoglobuin Deficiency	DisGeNET Gene-Disease Associations	1.0	null
PMC2856528__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.117
PMC6326667__F5	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-OHPK-1626-SM-2YUN3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.830962
Bone deterioration disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.134
GTEX-TMMY-0005-SM-33HBN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.46144
Colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.504
immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.170888
Primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.133
showed	GeneRIF Biological Term Annotations	1.0	null
BL992 (INCENP)	NURSA Protein Complexes	1.0	null
Autoimmune disease of endocrine system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.724
PMC7491318__F11	PFOCR Pathway Figure Associations 2024	1.0	null
Perturb_2857_Mut_VHL_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	7.45684
GTEX-WYVS-0006-SM-3NMA7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.83399
aboincompatible	GeneRIF Biological Term Annotations	1.0	null
Reticuloendothelial system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.746
Integrin alphaM-beta2 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.169
THP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46527
PMC5513767__F1	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-XQ3S-0001-SM-4B64K	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.909891
Acquired immunodeficiency syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.5
Pilus tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.848
Anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.078
Paranasal sinus disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.214
procedure	GeneRIF Biological Term Annotations	1.0	null
Presynaptic cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.317
GTEX-OOBJ-3026-SM-3NB1D	GTEx Tissue Sample Gene Expression Profiles	1.0	0.84201
Peptidase inhibitor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.942
496100545_HIP_possible Alzheimer's disease_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.21256
SNU-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Peritonitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.316
BL5105 (BRF1)	NURSA Protein Complexes	1.0	null
independently	GeneRIF Biological Term Annotations	1.0	null
GSE158743_1_v_2_nfkbia_human	RummaGEO Gene Perturbation Signatures	1.0	null
B cell deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.464
bonemarrow_6b	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.917962
cardiomyocytes	GeneRIF Biological Term Annotations	1.0	null
DF-84-RT50_1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.207476
GTEX-T6MN-0526-SM-32PMS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.25716
BL8473 (MADD)	NURSA Protein Complexes	1.0	null
GTEX-RNOR-0526-SM-2TF4O	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.41488
periodontitis	GeneRIF Biological Term Annotations	1.0	null
Neurofibrillary tangle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.585
GTEX-VJYA-0426-SM-3GIJK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.03915
IGLC3	Pathway Commons Protein-Protein Interactions	1.0	null
G01650EU	GlyGen Glycosylated Proteins	1.0	null
Cardiovascular system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.833
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843689
kidney_d	HPA Tissue Sample Gene Expression Profiles	1.0	1.17088
Proteinuria	CTD Gene-Disease Associations	1.0	1.51607
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-A_ATF4-def_vs_HCT116_ctrl-Supplementary_Table_2A_Contrast_ATF4-def_control_vs_HCT116_control_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
BL7502 (VPRBP)	NURSA Protein Complexes	1.0	null
PMC3091670__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.28
RSF complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.73
GTEX-XQ3S-1526-SM-4BOOC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.880484
neisseria	GeneRIF Biological Term Annotations	1.0	null
SLIK (SAGA-like) complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.901
Neoplasms	CTD Gene-Disease Associations	1.0	1.6043
Sarcoidosis	HuGE Navigator Gene-Phenotype Associations	1.0	null
skin	HPA Tissue Gene Expression Profiles	-1.0	-0.879326
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
PMC4587761__F3	PFOCR Pathway Figure Associations 2024	1.0	null
REL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2941
501A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.33849
BL2853 (MED18)	NURSA Protein Complexes	1.0	null
GTEX-S4Z8-0326-SM-3K2AU	GTEx Tissue Sample Gene Expression Profiles	1.0	1.36799
BL595 (APTX)	NURSA Protein Complexes	1.0	null
Integrin alphaIIb-beta3 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.768
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157S_vs_MSX1-Gene_id_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
placental	GeneRIF Biological Term Annotations	1.0	null
PMC2727911__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Blood microparticle	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043662
GTEX-WXYG-0226-SM-3NB2Y	GTEx Tissue Sample Gene Expression Profiles	1.0	0.876218
BL7062 (CHUK)	NURSA Protein Complexes	1.0	null
superior	GeneRIF Biological Term Annotations	1.0	null
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856085
trunk	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Acrosomal membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.271
GTEX-XXEK-1326-SM-4BRV1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09248
GTEX-UJHI-0726-SM-3DB92	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08829
GTEX-OIZG-1326-SM-2HMIQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.93421
KOSC-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CBC2032 (ZMYND8)	NURSA Protein Complexes	1.0	null
meningitidis	GeneRIF Biological Term Annotations	1.0	null
Vasculitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.11
ficolin3	GeneRIF Biological Term Annotations	1.0	null
2-aminothiophenol	CTD Gene-Chemical Interactions	1.0	null
Blood platelet	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.278
GTEX-PWCY-0226-SM-48TD8	GTEx Tissue Sample Gene Expression Profiles	1.0	1.06457
systemic lupus erythematosus	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
Primary lysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.921
autoimmune	GeneRIF Biological Term Annotations	1.0	null
Candidiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.176
Renal parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.781
implicating	GeneRIF Biological Term Annotations	1.0	null
x63ag8.653	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.99
gallbladder	HPA Tissue Protein Expression Profiles	1.0	1.73487
GSE246335_4_v_5_tp53_human	RummaGEO Gene Perturbation Signatures	1.0	null
BL5638 (AKAP13)	NURSA Protein Complexes	1.0	null
G63381RX	GlyGen Glycosylated Proteins	1.0	null
BL4952 (HMGN3)	NURSA Protein Complexes	1.0	null
sjogrens	GeneRIF Biological Term Annotations	1.0	null
retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048587
BL7836 (PDLIM7)	NURSA Protein Complexes	1.0	null
spinal column	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Monocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.249
deficiencies	GeneRIF Biological Term Annotations	1.0	null
lymphoid tissue	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
lymphoid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.094796
Exanthem	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.063
BL7075 (NFKBIB)	NURSA Protein Complexes	1.0	null
Plasma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.567
c4bp	GeneRIF Biological Term Annotations	1.0	null
cardiovascular	GAD High Level Gene-Disease Associations	1.0	0.298214
PMC6940904__F1	PFOCR Pathway Figure Associations 2024	1.0	null
lectin	GeneRIF Biological Term Annotations	1.0	null
BL7986 (ABCD3)	NURSA Protein Complexes	1.0	null
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11082
spinal cord	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PMC4716143__F3	PFOCR Pathway Figure Associations 2024	1.0	null
CBC572 (ESPL1)	NURSA Protein Complexes	1.0	null
Astroglial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.182
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.57
disease	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
female reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.983278
GTEX-XBEW-0006-SM-4AT4E	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.47874
consequent	GeneRIF Biological Term Annotations	1.0	null
Microglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.352
mRNA_MSC_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
Allergic contact dermatitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.963
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_Jurkat_LPS_vs_DC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Pancreas	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.5
Metabolic Syndrome X	HuGE Navigator Gene-Phenotype Associations	1.0	null
GTEX-SUCS-0526-SM-4DM56	GTEx Tissue Sample Gene Expression Profiles	1.0	1.66731
Perturb_6313_OE_GLDN_SRP407749	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
PMC9181267-mmc5.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-GSEA_name_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
compensate	GeneRIF Biological Term Annotations	1.0	null
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Azurophil granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.94
PMC4571158__F2	PFOCR Pathway Figure Associations 2023	1.0	null
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856085
PMC5427104__F1	PFOCR Pathway Figure Associations 2023	1.0	null
EGR1	ChEA Transcription Factor Targets	1.0	null
GTEX-QXCU-1726-SM-2TC6L	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00286
IGLC1	Pathway Commons Protein-Protein Interactions	1.0	null
PMC8046170__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Retinal vascular occlusion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.117
GTEX-W5WG-1126-SM-4LMK4	GTEx Tissue Sample Gene Expression Profiles	1.0	0.863036
PMC3432348__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Tonsil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.113
Bile duct disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.947
Urinary tract infection	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.312
immune	GAD High Level Gene-Disease Associations	1.0	0.310806
cerebrospinal fluid	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Membranous glomerulonephritis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.954
GTEX-Q2AI-0326-SM-2I3EK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.83912
TP53-18474530-U2OS-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
Mesophyll	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.757
Pyuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.275
BL1755 (MED23)	NURSA Protein Complexes	1.0	null
GSE184087_2_v_1_tert_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-QCQG-0126-SM-48U27	GTEx Tissue Sample Gene Expression Profiles	1.0	1.72654
sophistication	GeneRIF Biological Term Annotations	1.0	null
HCC364	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47225
BET1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68098
Multimerin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.846
HH	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80895
C2BBE1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.896178
BL2292 (BTBD12)	NURSA Protein Complexes	1.0	null
Mueller cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.198
Arachnoid mater	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.764
ZNF792	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60296
Epstein-Barr virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.112
biopsies	GeneRIF Biological Term Annotations	1.0	null
GTEX-SIU7-0006-SM-2XCE6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.85144
Squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.11
stereocilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.476027
Lung	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.7
Fetal Growth Retardation	CTD Gene-Disease Associations	1.0	1.26794
Demyelinating disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.028
NUDUL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67285
pancreas_6b	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.00863
BL7711 (EPS8)	NURSA Protein Complexes	1.0	null
BL8108 (RAD54L2)	NURSA Protein Complexes	1.0	null
fh67	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.604
GTEX-QDVJ-1126-SM-48U1U	GTEx Tissue Sample Gene Expression Profiles	1.0	2.41752
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.14319
Mitotic checkpoint complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.018
troglitazone_rattus norvegicus_gpl341_liver_gds3850	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Activation of C3 and C5	Reactome Pathways 2014	1.0	null
BL8525 (CLASP2)	NURSA Protein Complexes	1.0	null
MYCN	ChEA Transcription Factor Targets	1.0	null
GTEX-XBED-0926-SM-48TCE	GTEx Tissue Sample Gene Expression Profiles	1.0	0.877154
BL3800 (PALB2)	NURSA Protein Complexes	1.0	null
Autism spectrum disorder or schizophrenia	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.5699
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043766
Steatotic liver disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.869
Lewy body dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
amygdaloid complex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.5016
exocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Gut	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.533
due	GeneRIF Biological Term Annotations	1.0	null
GTEX-WFG8-0426-SM-3GILD	GTEx Tissue Sample Gene Expression Profiles	1.0	0.907499
BL5502 (HDAC6)	NURSA Protein Complexes	1.0	null
rna	GeneRIF Biological Term Annotations	1.0	null
BL2310 (MLLT3)	NURSA Protein Complexes	1.0	null
PMC9424213-41467_2022_32537_MOESM6_ESM.xlsx-siHNRNPK_nuc-DEGs_for_hnRNPK_KD_Nuclear_RNA_of_HeLa_cells_AR	Rummagene Transcription Factor Associations 2026	1.0	null
BL1110 (CENPF)	NURSA Protein Complexes	1.0	null
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.930179
Mood disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.844
GSE152699,GSE152723_0_v_1_vemurafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
esophagus	HPA Tissue Gene Expression Profiles	-1.0	-0.849364
membrane	GeneRIF Biological Term Annotations	1.0	null
Gall bladder	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.317
NCIH23	CCLE Cell Line Gene CNV Profiles	1.0	1.35545
localized	GeneRIF Biological Term Annotations	1.0	null
GTEX-UJHI-1226-SM-4IHLR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.20677
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1354
EJM	CCLE Cell Line Gene CNV Profiles	1.0	1.73259
Brain capillary endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.508
PMC12696503-mmc2.xlsx-ST15_KD_RNA-seq_diff_expr-ensembl_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-VUSG-0126-SM-4KL1X	GTEx Tissue Sample Gene Expression Profiles	1.0	1.88436
SC-25359 (FOXO4)	NURSA Protein Complexes	1.0	null
Coronary artery smooth muscle cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.777
Phagolysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.518
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2523
protease	GeneRIF Biological Term Annotations	1.0	null
Dengue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.426
MHC class I protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.547
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050507
West Nile encephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
BL2498 (DOT1L)	NURSA Protein Complexes	1.0	null
Autoimmune disease of musculoskeletal system	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
EHEB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-SNOS-0003-SM-3NMAO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.25615
Prostate cancer	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.830103
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939231
PMC10039511-12864_2023_9238_MOESM1_ESM.xlsx-LPS_group-Unnamed_1_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Photosystem II	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.442
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40449
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.498
GTEX-WXYG-0005-SM-3NB3M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.968783
Schwalie et al.Nature.G4_Adipose tissue_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
GTEX-OXRK-0006-SM-2HML1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.94564
PMC4300866__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.852
SC-286 (CSK)	NURSA Protein Complexes	1.0	null
GTEX-RU72-0008-SM-46MV8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.864441
TAP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.603
SC-9019 (PTK2B)	NURSA Protein Complexes	1.0	null
pathologic	GeneRIF Biological Term Annotations	1.0	null
protein-lipid complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.07724
PMC8618211__F2	PFOCR Pathway Figure Associations 2024	1.0	null
BL6077 (METTL3)	NURSA Protein Complexes	1.0	null
Psoriasis	DisGeNET Gene-Disease Associations	1.0	null
Glomerulosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.201
alitretinoin_homo sapiens_gpl6480_gse43090	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE102870_11_v_9_nr1h4_human	RummaGEO Gene Perturbation Signatures	1.0	null
vermiform appendix	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
BL7841 (ARHGEF12)	NURSA Protein Complexes	1.0	null
GSE134700_0_v_4_ythdf2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-TMMY-1726-SM-4DXTD	GTEx Tissue Sample Gene Expression Profiles	1.0	0.94362
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09358
oocyte	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.27016
G75983OB	GlyGen Glycosylated Proteins	1.0	null
Disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Malaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.914
GSE216043_11_v_9_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Neuromyelitis optica (AQP4-IgG-positive)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.55229
GTEX-P78B-1626-SM-2S1O1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.33702
G06110VR	GlyGen Glycosylated Proteins	1.0	null
Learning disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.03
SC-28673 (ATF1)	NURSA Protein Complexes	1.0	null
Lupus nephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.352
Goodpasture syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.129
GTEX-X5EB-2526-SM-4E3HY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.87433
AB80 (BRCA1)	NURSA Protein Complexes	1.0	null
viscus	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Osteoporosis	HuGE Navigator Gene-Phenotype Associations	1.0	null
Anxiety disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.212
GTEX-OHPK-0006-SM-2HMKH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.988923
Lupus erythematosus	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
GTEX-R45C-0008-SM-48FF2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.848839
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BL5480 (BRD3)	NURSA Protein Complexes	1.0	null
extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Thrombocytopenia	CTD Gene-Disease Associations	1.0	1.35647
Skin disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
CL-34	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.63205
direct	GeneRIF Biological Term Annotations	1.0	null
PMC9130782-Table_3.xlsx-downregulated-ZNF366_ZNF366	Rummagene Transcription Factor Associations 2026	1.0	null
Stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.269
GTEX-QESD-2026-SM-447BI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.47835
Angioedema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.01
SETDB1	ChEA Transcription Factor Targets	1.0	null
PMC4451739__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Myelin sheath	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.729
NEU	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.145
GTEX-OXRK-1826-SM-2HMJE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.25338
PMC2704572__F1	PFOCR Pathway Figure Associations 2023	1.0	null
FCN2	Pathway Commons Protein-Protein Interactions	1.0	null
BL6259 (MBD4)	NURSA Protein Complexes	1.0	null
GTEX-P78B-0526-SM-2I5F7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.984911
GTEX-P4PQ-2626-SM-33HC9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.11187
GTEX-WYVS-0326-SM-3NM9V	GTEx Tissue Sample Gene Expression Profiles	1.0	1.07672
G64527OM	GlyGen Glycosylated Proteins	1.0	null
COLO-818	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16735
GSE190555,GSE190557_2_v_3_chd4_human	RummaGEO Gene Perturbation Signatures	1.0	null
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Down_bins-Down_bins_loosing_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
BL1309 (WRN)	NURSA Protein Complexes	1.0	null
Leaf	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.812
primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.085049
PMC3433899__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Hepatitis B	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.597
PKNOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.441
BL6690 (KDM5D)	NURSA Protein Complexes	1.0	null
t62-spleen_male_8w	MoTrPAC Rat Endurance Exercise Training	1.0	1.88596
smoking	GeneRIF Biological Term Annotations	1.0	null
rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.508808
adrenal_4c	HPA Tissue Sample Gene Expression Profiles	1.0	1.15867
CBC412 (AHCTF1)	NURSA Protein Complexes	1.0	null
BL2754 (LCOR)	NURSA Protein Complexes	1.0	null
Normocytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.964
PMC6290032__F1	PFOCR Pathway Figure Associations 2023	1.0	null
then	GeneRIF Biological Term Annotations	1.0	null
PMC6821383__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Heart conduction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.02
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.924539
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.92529
CBC801 ()	NURSA Protein Complexes	1.0	null
BL2224 (COL4A3BP)	NURSA Protein Complexes	1.0	null
mammary gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Colonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.382
GSE172494_3_v_1_nicotinamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
numbers	GeneRIF Biological Term Annotations	1.0	null
BL6318 (PHF12)	NURSA Protein Complexes	1.0	null
Tuberculosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.622
RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.6065
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Autoimmune disease of skin and connective tissue	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.584
GTEX-XLM4-0004-SM-4AT5I	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.843406
brain ventricle	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
496100515_HIP_dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.25198
b-lymphocyte	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
t68-liver_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	3.86666
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7538
BL1776 (STK10)	NURSA Protein Complexes	1.0	null
dorsolateral prefrontal cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.08204
GTEX-OIZH-0126-SM-2HMIS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.24353
GTEX-S341-1226-SM-4AD5S	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.03953
GTEX-S32W-2126-SM-2XCB1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.18914
Mitral valve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.135
JHOS-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KAP1-22055183-ESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
following	GeneRIF Biological Term Annotations	1.0	null
E.F.G complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.727
SCC-9	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.842665
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.68496
GSE221327_1_v_11_clpp_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-RWSA-1426-SM-47JXA	GTEx Tissue Sample Gene Expression Profiles	1.0	1.36908
GSE167956_1_v_0_trim28_human	RummaGEO Gene Perturbation Signatures	-1.0	null
system	GeneRIF Biological Term Annotations	1.0	null
lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.528063
BL6836 (NUP188)	NURSA Protein Complexes	1.0	null
PMC4571158__F2	PFOCR Pathway Figure Associations 2024	1.0	null
BL2519 (VCP)	NURSA Protein Complexes	1.0	null
GTEX-S95S-1426-SM-2XCDM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.962317
GTEX-QCQG-0726-SM-48U1Z	GTEx Tissue Sample Gene Expression Profiles	1.0	0.832588
Calprotectin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.302
Recurrence	HuGE Navigator Gene-Phenotype Associations	1.0	null
significant	GeneRIF Biological Term Annotations	1.0	null
Perturb_8979_KD_MEOX2_SRP358321	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	12.593
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.45828
PMC4681751__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Psychotic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.147
Drug Eruptions	CTD Gene-Disease Associations	1.0	2.88009
GTEX-U3ZM-0126-SM-3DB8M	GTEx Tissue Sample Gene Expression Profiles	1.0	1.05505
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23177
musculoskeletal system disease	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
Perturb_12683_KD_circEZH2_SRP388087	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-17.7447
GSE224004,GSE224005_0_v_1_chd4_human	RummaGEO Gene Perturbation Signatures	1.0	null
BL1801 (BCL11B)	NURSA Protein Complexes	1.0	null
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.03432
fh16	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.554
GSE71468,GSE76476_0_v_1_rbfox1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Thrombospondin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.666
BL8252 (QSER1)	NURSA Protein Complexes	1.0	null
Extracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.015
MD-17-VD78_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.220154
sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.181798
HS 940.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34176
Glutathione hydrolase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.15
quantitative	GeneRIF Biological Term Annotations	1.0	null
Middle ear disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
Pharyngitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.448
BL5439 (GEMIN5)	NURSA Protein Complexes	1.0	null
interleukin-2 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.16
NCO2	CCLE Cell Line Gene CNV Profiles	1.0	1.42303
Plasma membrane protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.759
PMC6296511__F3	PFOCR Pathway Figure Associations 2023	1.0	null
PMC3641842__F1	PFOCR Pathway Figure Associations 2024	1.0	null
attachment	GeneRIF Biological Term Annotations	1.0	null
breast	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.455
upregulated	GeneRIF Biological Term Annotations	1.0	null
skeletalmuscle_a	HPA Tissue Sample Gene Expression Profiles	-1.0	-2.04876
PMC9181267-mmc3.xls-FILTERED_OLD-INFvsYOUNG-INF_LUN-GSEA_name_TOPORS	Rummagene Transcription Factor Associations 2026	1.0	null
BL2457 (UBE2L3)	NURSA Protein Complexes	1.0	null
distribution	GeneRIF Biological Term Annotations	1.0	null
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08394
Cysteine synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.875
mediodorsal nucleus of thalamus_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.82858
PMC8702080__F1	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-X15G-0005-SM-3NMDA	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.20682
BL2178 (RICTOR)	NURSA Protein Complexes	1.0	null
Liver Cirrhosis, Experimental	CTD Gene-Disease Associations	1.0	1.12495
Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
Lymphoid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.09
Retinal pigment epithelium cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.989
Urinary bladder	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.817
Blood serum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.206
PMC7934421__F1	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-T6MN-0005-SM-32PLJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.95612
GTEX-P4QS-1326-SM-3NMCD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.80678
Blood	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
GTEX-Q2AH-0726-SM-2I3EA	GTEx Tissue Sample Gene Expression Profiles	1.0	1.10236
Myelin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.727
Aortic endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.887
bsc1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.575
DDX27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76455
BL1745 (CITED1)	NURSA Protein Complexes	1.0	null
Node of Ranvier	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.645
PMC6527583__F4	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-T5JC-0626-SM-3NMA6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.80383
CBC42 (NAT10)	NURSA Protein Complexes	1.0	null
GSE194396,GSE194429_1_v_0_atrx_human	RummaGEO Gene Perturbation Signatures	-1.0	null
L1236	CCLE Cell Line Gene CNV Profiles	1.0	1.51035
HCC2157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.86984
BL6306 (POLL)	NURSA Protein Complexes	1.0	null
vessel	GeneRIF Biological Term Annotations	1.0	null
primary motor cortex (area M1, area 4)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.28901
GTEX-SIU7-1326-SM-4BRWW	GTEx Tissue Sample Gene Expression Profiles	1.0	0.942432
chinese	GeneRIF Biological Term Annotations	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
systemic	GeneRIF Biological Term Annotations	1.0	null
GSE125014_1_v_2_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-OIZG-0005-SM-2HMJC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.8287
Lysosomal storage disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.869
Lipid storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.398
Congenital afibrinogenemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.902
Endocrine system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.828
Spike	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.654
Parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.717
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Developmental disorder of mental health	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.371
loss	GeneRIF Biological Term Annotations	1.0	null
GTEX-U4B1-0126-SM-4DXSN	GTEx Tissue Sample Gene Expression Profiles	1.0	2.13263
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0815
PMC9302041-DataSheet_1.docx-0-BACH2_BACH2	Rummagene Transcription Factor Associations 2026	1.0	null
BL1944 (SMG7)	NURSA Protein Complexes	1.0	null
Endocardium disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.383
GSE172494_2_v_1_nicotinamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Immune system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.955
PBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2376
BL6604 (CDC42EP3)	NURSA Protein Complexes	1.0	null
GTEX-SE5C-0006-SM-4BRW5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.845789
Myasthenia gravis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.798
GTEX-WEY5-0006-SM-3GIKG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.39025
Hypersensitivity vasculitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.615
BL2442 (RNF4)	NURSA Protein Complexes	1.0	null
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.17863
Intrinsic component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.738
Rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.168
GTEX-U3ZN-0826-SM-4DXSZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.15377
BL5062 (POLH)	NURSA Protein Complexes	1.0	null
Congestive heart failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.174
BL1684 (BUB3)	NURSA Protein Complexes	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.916825
cofactors	GeneRIF Biological Term Annotations	1.0	null
Death	CTD Gene-Disease Associations	1.0	1.55946
GTEX-UJMC-1826-SM-3GADT	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.55098
Atrophy	CTD Gene-Disease Associations	1.0	1.35184
stat1	GeneRIF Biological Term Annotations	1.0	null
PMC4672393__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Bullous skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.486
mp90	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.692
Leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.656
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.52867
hippocampus (hippocampal formation)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.38066
Germ tube	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.839
correlated	GeneRIF Biological Term Annotations	1.0	null
ischemic	GeneRIF Biological Term Annotations	1.0	null
complexes	GeneRIF Biological Term Annotations	1.0	null
Auditory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.435
skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.057134
BL3238 (DDX28)	NURSA Protein Complexes	1.0	null
Corpus callosum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.478
S100A9 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.581
BL2222 (COL4A3BP)	NURSA Protein Complexes	1.0	null
GTEX-REY6-1226-SM-48FDR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.61174
BL460 (RBM14)	NURSA Protein Complexes	1.0	null
fh68	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.598
BL7633 (COBRA1)	NURSA Protein Complexes	1.0	null
BL5398 (FAM175B)	NURSA Protein Complexes	1.0	null
GTEX-RWS6-0726-SM-47JXI	GTEx Tissue Sample Gene Expression Profiles	1.0	0.824086
Pervasive developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.865
Yoshida ascites sarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.855
GTEX-OXRL-0008-SM-3NB29	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.896821
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.45113
basal ganglia disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.258064
GTEX-NL3H-0011-R10A-SM-2I3E9	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.0446
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.95906
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	2.44249
Intestinal Diseases	CTD Gene-Disease Associations	1.0	1.05648
PMC8554124-DataSheet2.XLSX-57-CEBPD_CEBPD	Rummagene Transcription Factor Associations 2026	1.0	null
apical junction complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.197662
large intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
CEBPB-20513432-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
PMC8557339__F4	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-TMMY-0426-SM-33HBB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.925287
ttr	GeneRIF Biological Term Annotations	1.0	null
GTEX-S4Q7-0003-SM-3NM8M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.845192
GSE223241_1_v_3_cdkn2a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K27me3_CH12.LX_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
offers	GeneRIF Biological Term Annotations	1.0	null
BL2764 (HNRNPU)	NURSA Protein Complexes	1.0	null
496100564_TCx_no dementia_no TBI_82_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.65815
Hypertriglyceridemia	CTD Gene-Disease Associations	1.0	1.06881
Phagocytic cup	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.867
Age related macular degeneration 13	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.543
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044514
Angioedema	DisGeNET Gene-Disease Associations	1.0	null
G81006GJ	GlyGen Glycosylated Proteins	1.0	null
Bone remodeling disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.12
Ependymal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.274
proteinuria	GeneRIF Biological Term Annotations	1.0	null
Hypocotyl	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.817
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
studied	GeneRIF Biological Term Annotations	1.0	null
GTEX-XXEK-1126-SM-4BRUX	GTEx Tissue Sample Gene Expression Profiles	1.0	1.80114
BL1752 (MED14)	NURSA Protein Complexes	1.0	null
SK-MEL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.23423
BL73 (CLSPN)	NURSA Protein Complexes	1.0	null
GTEX-RTLS-1326-SM-46MUN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.45274
GTEX-XUYS-0326-SM-47JX2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.81211
GTEX-XBEW-0002-SM-4AT5O	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.22042
Laticifer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.37
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.461
Spinal cord disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.321
Renal glomerular capsule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.691
form	GeneRIF Biological Term Annotations	1.0	null
BL8109 (RAD54L2)	NURSA Protein Complexes	1.0	null
renal	GeneRIF Biological Term Annotations	1.0	null
PMC9601604-NIHMS1841143-supplement-SuppTable-2.xlsx-FOXO3-specific_targets-FOXO3-specific_targets_1218_FOXO3	Rummagene Transcription Factor Associations 2026	1.0	null
blood plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.633144
ChaGo-K-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.04
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.941716
Nephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.424
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23141
septum (resp epith)	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.847727
BL4726 (ATXN1)	NURSA Protein Complexes	1.0	null
Hyperplasia	CTD Gene-Disease Associations	1.0	2.22695
CBC541 (CYLD)	NURSA Protein Complexes	1.0	null
PMC6177401__F3	PFOCR Pathway Figure Associations 2024	1.0	null
PMC10925000-12885_2024_12075_MOESM2_ESM.pdf-5-HEY2_HEY2	Rummagene Transcription Factor Associations 2026	1.0	null
PMC5771075-12896_2018_414_MOESM1_ESM.xlsx-MSC_all-Gene_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
contributing	GeneRIF Biological Term Annotations	1.0	null
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.983278
BL6423 (CCNC)	NURSA Protein Complexes	1.0	null
PMC9684170__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Peripheral blood cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.418
digestive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
Chronic venous insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.186
SC-67074 (SENP1)	NURSA Protein Complexes	1.0	null
vascular	GeneRIF Biological Term Annotations	1.0	null
Marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.332
GTEX-PWOO-1026-SM-48TCN	GTEx Tissue Sample Gene Expression Profiles	1.0	0.853479
steroid	GeneRIF Biological Term Annotations	1.0	null
c4b deficiency	OMIM Gene-Disease Associations	1.0	null
skeletalmuscle_d	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.59972
spanish	GeneRIF Biological Term Annotations	1.0	null
Retinal vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.43
GTEX-WHPG-0006-SM-3NMBV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.12685
Larval cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.593
tenascin	GeneRIF Biological Term Annotations	1.0	null
GTEX-SE5C-1126-SM-4BRWZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.846007
PMC2939656__F4	PFOCR Pathway Figure Associations 2024	1.0	null
hippocampus (hippocampal formation)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.910842
Sto	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.006
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047108
detection of external biotic stimulus	GO Biological Process Annotations 2023	1.0	null
PMC1769518__F1	PFOCR Pathway Figure Associations 2023	1.0	null
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.228764
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.40884
BL2432 (NCOA5)	NURSA Protein Complexes	1.0	null
Cerebral cortex	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.015
GTEX-QDVN-0926-SM-2I5GL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01372
mRNA_CDX2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
Mononuclear cell	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
Ovarian surface epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.667
GTEX-RN64-1826-SM-48FDV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.07847
BL5166 (CDKN2A)	NURSA Protein Complexes	1.0	null
t69-brown-adipose_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	5.6256
PMC5557313__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC4143352__F7	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-NL3H-0006-SM-2I3FW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.08546
Cell outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.198
Bullous pemphigoid	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
Erythrocytic stage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.815
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.970664
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.09899
Podocyte foot	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.924
Colon	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.883
Nephritis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.954
Autoimmune Diseases	CTD Gene-Disease Associations	1.0	2.88009
Integumentary system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.118428
GTEX-WI4N-0726-SM-3TW93	GTEx Tissue Sample Gene Expression Profiles	1.0	1.13747
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
BL5963 (RAF1)	NURSA Protein Complexes	1.0	null
Inflammatory bowel disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.898
Diabetes Complications	HuGE Navigator Gene-Phenotype Associations	1.0	null
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071895
Major depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.357
BL8292 (NOTCH2)	NURSA Protein Complexes	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68829
Liver Failure, Acute	CTD Gene-Disease Associations	1.0	1.09262
Sclerosing cholangitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.947
PMC5798330__F2	PFOCR Pathway Figure Associations 2024	1.0	null
TGIF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2681
Toxic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.438
Apoptotic body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.328
Antithrombin III deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.187
PMC8323949-pcbi.1009228.s007.xlsx-X17-Unnamed_0_ZNF717	Rummagene Transcription Factor Associations 2026	1.0	null
Psoriatic arthritis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
GTEX-QV44-0826-SM-2S1RG	GTEx Tissue Sample Gene Expression Profiles	1.0	0.885855
BL1778 (C21orf7)	NURSA Protein Complexes	1.0	null
Uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.556
epidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.02486
CBC652 (AGAP4)	NURSA Protein Complexes	1.0	null
Photosystem II oxygen evolving complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.651
BL4774 (MTOR)	NURSA Protein Complexes	1.0	null
BL437 (NCOA2)	NURSA Protein Complexes	1.0	null
clue	GeneRIF Biological Term Annotations	1.0	null
SC-28749 (NCOA4)	NURSA Protein Complexes	1.0	null
CBC542 (CYLD)	NURSA Protein Complexes	1.0	null
wild	GeneRIF Biological Term Annotations	1.0	null
PMC6109707__F8	PFOCR Pathway Figure Associations 2023	1.0	null
19843711-TableS2	GeneSigDB Published Gene Signatures	1.0	null
Parietal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.19
GTEX-OXRL-1626-SM-2YUMU	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.18984
BL1004 (ATF7IP)	NURSA Protein Complexes	1.0	null
UBTF_02_198	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.62198
Organism form	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.533
Large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.505
Hemorrhagic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.837
higher	GeneRIF Biological Term Annotations	1.0	null
gestational	GeneRIF Biological Term Annotations	1.0	null
Appendicitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.038
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.5411
IgM B cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.784
Specific granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.134
GTEX-QESD-1626-SM-2S1RB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.03458
Tubulointerstitium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.237
primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.86624
relapsing-remitting multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.051
PMC3163125__F1	PFOCR Pathway Figure Associations 2024	1.0	null
G23294PN	GlyGen Glycosylated Proteins	1.0	null
Urinary tract	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.833
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
Perturb_12234_KD_STAT3_SRP081918	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
Amoeboid microglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.802
Agammaglobulinemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.347
Weight Gain	CTD Gene-Disease Associations	1.0	1.15729
BL459 (TRIP4)	NURSA Protein Complexes	1.0	null
CBC642 (CC2D1B)	NURSA Protein Complexes	1.0	null
only	GeneRIF Biological Term Annotations	1.0	null
BL1683 (BUB1)	NURSA Protein Complexes	1.0	null
PMC7904891__F1	PFOCR Pathway Figure Associations 2023	1.0	null
16115903-TableS1	GeneSigDB Published Gene Signatures	1.0	null
mediodorsal nucleus of thalamus_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.14838
GSE114284_4_v_0_irf1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
elevated	GeneRIF Biological Term Annotations	1.0	null
clinical	GeneRIF Biological Term Annotations	1.0	null
BL5883 (CIZ1)	NURSA Protein Complexes	1.0	null
GTEX-XUZC-0226-SM-4BOO7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.848818
amygdaloid complex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.0122
GTEX-PLZ4-1226-SM-2I5FE	GTEx Tissue Sample Gene Expression Profiles	1.0	1.20951
GTEX-S7SF-1326-SM-4AD4P	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00449
female	GeneRIF Biological Term Annotations	1.0	null
RFX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7518
BL3721 (KDM4B)	NURSA Protein Complexes	1.0	null
PMC4300866__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Chagas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.396
GTEX-S4P3-1626-SM-3K2AZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00145
PMC6876298__F2	PFOCR Pathway Figure Associations 2023	1.0	null
GSE149901_2_v_0_anlotinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Small saphenous vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.112
Retinal macular dystrophy 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.042
GTEX-T2YK-0008-SM-4DM6M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.7857
17676974-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Perturb_14413_KO_ARID1A_SRP355686	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
complement	GeneRIF Biological Term Annotations	1.0	null
Reticulocyte count	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.969897
nicotine_mus musculus_gpl1261_gse31004	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-RM2N-1926-SM-48FCU	GTEx Tissue Sample Gene Expression Profiles	1.0	1.97438
GSE85880,GSE85881_0_v_1_tretinoin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ChIP_RCOR2_21632747	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
Urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.141
Urine	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.945
pd5	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.672
Early phagosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.897
BL453 (TRIP6)	NURSA Protein Complexes	1.0	null
Congenital adrenal hyperplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.891
DAUDI cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.508
syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.080784
Perturb_2852_Mut_NRAS_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
Anterior Uveitis	DisGeNET Gene-Disease Associations	1.0	null
GTEX-WH7G-0005-SM-3NMBX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00565
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856693
PMC8509647__F3	PFOCR Pathway Figure Associations 2024	1.0	null
BL2394 (CDT1)	NURSA Protein Complexes	1.0	null
BL2136 (ROCK1)	NURSA Protein Complexes	1.0	null
ovary cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.601283
GTEX-SUCS-0008-SM-4DM53	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.05475
Decreased Serum Complement C4B	DisGeNET Gene-Disease Associations	1.0	null
individual	GeneRIF Biological Term Annotations	1.0	null
GTEX-SNOS-0006-SM-32PLH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.46121
G50045TK	GlyGen Glycosylated Proteins	1.0	null
Hypersensitivity reaction type III disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.089
Myelin sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.761
healthy	GeneRIF Biological Term Annotations	1.0	null
18338247-SuppTable4A	GeneSigDB Published Gene Signatures	1.0	null
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Uterine disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
GTEX-QDT8-0006-SM-32PL3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07199
henochschonlein	GeneRIF Biological Term Annotations	1.0	null
Membranous glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.693
20479250-TableS4	GeneSigDB Published Gene Signatures	1.0	null
described	GeneRIF Biological Term Annotations	1.0	null
CBC622 (ZNF687)	NURSA Protein Complexes	1.0	null
bleomycin_mus musculus_gpl339_gds1492	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CFI	Pathway Commons Protein-Protein Interactions	1.0	null
PMC2704572__F2	PFOCR Pathway Figure Associations 2024	1.0	null
erythrocyte	GeneRIF Biological Term Annotations	1.0	null
GTEX-RVPV-0006-SM-2TF6Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.16227
NCI-H460	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.930179
PL-21	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.898098
controls	GeneRIF Biological Term Annotations	1.0	null
GATA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4241
Seizures	CTD Gene-Disease Associations	1.0	1.21855
BL1822 (IRF3)	NURSA Protein Complexes	1.0	null
PMC10195082-elife-82057-supp1.xlsx-RNAseq_DUX4-DUX4_geneID_DUX4	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-TKQ1-0008-SM-4DXSO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.857698
oncostatin-M receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.636
SC-67041 (PRAME)	NURSA Protein Complexes	1.0	null
cyp21	GeneRIF Biological Term Annotations	1.0	null
18223198-Table3	GeneSigDB Published Gene Signatures	1.0	null
t30-blood-rna_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	1.45651
GTEX-WHWD-0826-SM-3LK6R	GTEx Tissue Sample Gene Expression Profiles	1.0	1.11196
Herpangina	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.065
GTEX-SUCS-0006-SM-4DM59	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.981321
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.922257
GTEX-WFG7-0005-SM-3GIKM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04077
BL7037 (NFKB1)	NURSA Protein Complexes	1.0	null
kidney_a	HPA Tissue Sample Gene Expression Profiles	1.0	1.13423
BL5687 (ANKRD57)	NURSA Protein Complexes	1.0	null
Kidney disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.954
mRNA_KLF4_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.068828
End stage renal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.803
Thymus-medullary thymic epithelial cell	Tabula Sapiens Gene-Cell Associations	1.0	2.83734
Viral encephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.009
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62639
Feather vane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.628
MDA-MB-134-VI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.12232
BL6238 (TRERF1)	NURSA Protein Complexes	1.0	null
BL2227 (FIGNL1)	NURSA Protein Complexes	1.0	null
SRSF9_02_13	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.62164
BL2587 (NCOR2)	NURSA Protein Complexes	1.0	null
GSE158182_5_v_0_pnpla3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-QEL4-0726-SM-3GIJ5	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04019
juvenile	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.412771
protein-losing enteropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.258
GTEX-R53T-0005-SM-3GADK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.859779
GTEX-WOFL-0006-SM-3TW8K	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.40896
CBC411 (AHCTF1)	NURSA Protein Complexes	1.0	null
GSE202434,GSE202438_2_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.961769
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.23061
lymphnode	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.17959
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.479
attention deficit hyperactivity disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.635528
myocardial	GeneRIF Biological Term Annotations	1.0	null
tertiary	GeneRIF Biological Term Annotations	1.0	null
TBX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.8347
GTEX-SNOS-0226-SM-32PLR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.33351
PMC5524348-pone.0181667.s005.xlsx-Inflammation-MINT_SPEN	Rummagene Transcription Factor Associations 2026	1.0	null
BL5507 (HDAC7)	NURSA Protein Complexes	1.0	null
20436685-ST4-2	GeneSigDB Published Gene Signatures	1.0	null
Lymphopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.302
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2028
SC-9086 (NR2C2)	NURSA Protein Complexes	1.0	null
GTEX-XQ3S-0426-SM-4BOOA	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.49527
GTEX-WYJK-0126-SM-3NMAB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.965471
BL3057 (TIPRL)	NURSA Protein Complexes	1.0	null
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826486
MASP2	Pathway Commons Protein-Protein Interactions	1.0	null
aging	GAD High Level Gene-Disease Associations	1.0	0.293278
Alveolar macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.287
BL8633 (MASTL)	NURSA Protein Complexes	1.0	null
BL1109 (CENPF)	NURSA Protein Complexes	1.0	null
Complement factor I deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.056
GTEX-PWOO-0826-SM-48TCL	GTEx Tissue Sample Gene Expression Profiles	1.0	2.08338
MT-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.599
RFX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4261
PMC8482240__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Ovary	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	1.20583
Larynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.243
PMC4681751__F1	PFOCR Pathway Figure Associations 2023	1.0	null
BL1743 (CDK7)	NURSA Protein Complexes	1.0	null
connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.361502
SK-MEL-5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826486
POLR2A	ENCODE Transcription Factor Targets	1.0	null
Traumatic brain injury	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.538
mRNA_NIPBL_20720539	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.82973
Blood Protein Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
Subcutaneous tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.962
Spleen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.176
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.0162
Chronic kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.803
SEC14L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69977
Silicosis	DisGeNET Gene-Disease Associations	1.0	null
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.26496
Complement component 3 deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.329
BL-41 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.528
hnf4a_16714383_e18dot5_liver_lof_mouse_gpl1261_gds1916	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.618347
BL7507 (SOS1)	NURSA Protein Complexes	1.0	null
Connective tissue disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
Protease inhibitor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.878
Spinal cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.391
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.07815
Porcine aortic endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.246
Macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.503
letrozole_homo sapiens_gpl3921_gse33366	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMC6637639__F1	PFOCR Pathway Figure Associations 2023	1.0	null
short	GeneRIF Biological Term Annotations	1.0	null
B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.314
GTEX-PSDG-0726-SM-2I5FN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.27872
vitreoretinopathy	GeneRIF Biological Term Annotations	1.0	null
Cholangitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.947
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.2254
Perineuronal net	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
GTEX-QDVJ-0005-SM-2TC5X	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.984044
liver	GTEx Tissue Gene Expression Profiles	1.0	1.42624
IGLC2	Pathway Commons Protein-Protein Interactions	1.0	null
JEG-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.856599
C1QC	Pathway Commons Protein-Protein Interactions	1.0	null
autoimmunity	GeneRIF Biological Term Annotations	1.0	null
GTEX-OIZI-0626-SM-2XCEH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.30835
SK-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.726
Artery wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.358
PMC11602576-mmc11.xlsx-ST12-Table_S12_Output_of_mash_model_of_milk_and_GTEx_eQTL_effects_Related_to_Figure_2_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
Weight Loss	CTD Gene-Disease Associations	1.0	1.99581
PMC10864182-41588_2023_1596_MOESM4_ESM.xlsx-ST12_Significant_Genes_combine-Supplementary_Table_12_Genes_prioritisation_combining_FUMA_MAGMA_Hi-C_MAGMA_and_TWAS_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
JHESOAD1	CCLE Cell Line Gene CNV Profiles	1.0	1.95861
GSE158182_5_v_7_pnpla3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
albeit	GeneRIF Biological Term Annotations	1.0	null
inhibition	GeneRIF Biological Term Annotations	1.0	null
extraorganismal space	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
GTEX-VJYA-0526-SM-4KL1R	GTEx Tissue Sample Gene Expression Profiles	1.0	2.03167
H3K27me3_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
extrinsic allergic alveolitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.285086
IGHG2	Pathway Commons Protein-Protein Interactions	1.0	null
other organism part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Omk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.679
Cerebral infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
GTEX-S7PM-0008-SM-3NM9Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.868724
explanation	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.858
BL4650 (KIF22)	NURSA Protein Complexes	1.0	null
BL7838 (PDLIM7)	NURSA Protein Complexes	1.0	null
PMC5880643__F1	PFOCR Pathway Figure Associations 2023	1.0	null
focusing	GeneRIF Biological Term Annotations	1.0	null
Varicose veins	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.024
BL4914 (TRIM16)	NURSA Protein Complexes	1.0	null
PMC5094973-oncotarget-07-35932-s004.xlsx-c2_cp_biocarta_v4_0_symbols-NFKB1_NFKB1	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-OXRP-2326-SM-2S1NL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.37979
HUO9	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TUHR14TKB	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39576
inflammation	GeneRIF Biological Term Annotations	1.0	null
GSE202434,GSE202438_10_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ans	GeneRIF Biological Term Annotations	1.0	null
Bronchial disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.688
BL3695 (DLGAP5)	NURSA Protein Complexes	1.0	null
Complement component 5 deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.668
GTEx Brain 20-29 vs 60-69	GTEx Tissue-Specific Aging Signatures	1.0	10.4987
GSE80098,GSE80366_0_v_6_progesterone_human	RummaGEO Drug Perturbation Signatures	1.0	null
SW 1116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08394
increased freezing behavior	IMPC Knockout Mouse Phenotypes	1.0	null
Cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.28
ventrolateral prefrontal cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.17947
BL3415 (RAD52)	NURSA Protein Complexes	1.0	null
Saphenous vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.943
Salivary gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
Integral component of endoplasmic reticulum membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.004
PHF2-C Ab (PHF2)	NURSA Protein Complexes	1.0	null
c3 deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.909787
CBC2201 (RXRB)	NURSA Protein Complexes	1.0	null
PMC8547127__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Outer nuclear layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.881
PMC11118997-12931_2024_2848_MOESM1_ESM.xlsx-Table_S5-Table_S5_The_result_of_MR_analysis_and_sensitivity_analysis_for_FVC_decline_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
alloantibody	GeneRIF Biological Term Annotations	1.0	null
Connective tissue disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
Movement disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.15
PMC7571286-tvst-9-11-16_s004.xlsx-MaxQuant_-_SRF-Unnamed_209_SRF	Rummagene Transcription Factor Associations 2026	1.0	null
BL6497 (EVI1)	NURSA Protein Complexes	1.0	null
PMC12712253-12672_2025_4014_MOESM1_ESM.xlsx-Table_S4-Table_S4_The_result_of_MR_analysis_for_PC_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
upon	GeneRIF Biological Term Annotations	1.0	null
Carcinoma, Hepatocellular	CTD Gene-Disease Associations	1.0	1.67505
Eye degenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.178
GTEX-U8T8-0005-SM-3DB8F	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.2491
GAIT complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.582
Perturb_8305_KO_GALNT1_ERP012063	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-7.94454
GTEX-XUJ4-0126-SM-4BOP7	GTEx Tissue Sample Gene Expression Profiles	1.0	2.15668
conformational	GeneRIF Biological Term Annotations	1.0	null
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.1805
PMC11703395-SupplementaryTableS1.pdf-1-IRF9_IRF9	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-PVOW-0006-SM-3NMB8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00713
positive regulation of apoptotic cell clearance	GO Biological Process Annotations 2023	1.0	null
GSE208350_4_v_1_fgfr1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Platelet alpha granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.937
amygdaloid complex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.04214
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.821
SC-163 (CDK2)	NURSA Protein Complexes	1.0	null
Septic arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.003
Spinal cord disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
liver	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.7212
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2394
Blood microparticle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.176
antibodies	GeneRIF Biological Term Annotations	1.0	null
GSE95077_1_v_0_amiloride_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Pituitary gonadotropin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.417
SC-197 (MAX)	NURSA Protein Complexes	1.0	null
GTEX-PLZ6-0426-SM-2I5FG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00004
Arthritis, Rheumatoid	HuGE Navigator Gene-Phenotype Associations	1.0	null
Type IV pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.642
LRRC59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5471
PMC5306369__F1	PFOCR Pathway Figure Associations 2023	1.0	null
microvillus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.134883
Autoimmune thyroiditis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.828
blood	GTEx Tissue Gene Expression Profiles	-1.0	-1.32058
positive regulation of phagocytosis	GO Biological Process Annotations 2025	1.0	null
GSE229671,GSE229673_3_v_1_yrdc_human	RummaGEO Gene Perturbation Signatures	1.0	null
Cell periphery	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.772
monoclonal	GeneRIF Biological Term Annotations	1.0	null
BL8691 (ARHGEF5)	NURSA Protein Complexes	1.0	null
occipital neocortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.867799
BL2449 (SMARCE1)	NURSA Protein Complexes	1.0	null
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928975
urinary tract	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.156
BL2370 (SYK)	NURSA Protein Complexes	1.0	null
PMC4224073__F1	PFOCR Pathway Figure Associations 2023	1.0	null
covariate	GeneRIF Biological Term Annotations	1.0	null
PMC6433978__F2	PFOCR Pathway Figure Associations 2023	1.0	null
detection of molecule of bacterial origin	GO Biological Process Annotations 2023	1.0	null
carbamoyl-phosphate synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.86
PMC8049958__F12	PFOCR Pathway Figure Associations 2024	1.0	null
Hypersensitivity reaction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.892
rosiglitazone_mus musculus_gpl1261_control_gds4036	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
JL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.13748
G62894KT	GlyGen Glycosylated Proteins	1.0	null
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.114
Crescentic glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
BL4031 (BCAS2)	NURSA Protein Complexes	1.0	null
BL5899 (NIN)	NURSA Protein Complexes	1.0	null
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5572
Spinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.148
GTEX-S4Q7-0006-SM-3K2AT	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.14022
PMC2882188__F3	PFOCR Pathway Figure Associations 2023	1.0	null
method	GeneRIF Biological Term Annotations	1.0	null
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.05565
BL8736 (PRCC)	NURSA Protein Complexes	1.0	null
GTEX-S341-0006-SM-3NM8D	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.981577
Immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.741
primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17911
finding	GeneRIF Biological Term Annotations	1.0	null
lm2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.666
Staphylococcus aureus infection	KEGG Pathways 2026	1.0	null
mediodorsal nucleus of thalamus_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.87479
rosiglitazone_rattus norvegicus_gpl341_adipose tissue_gds3850	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BL3348 (ATN1)	NURSA Protein Complexes	1.0	null
Cco	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.779
PMC10864182-41588_2023_1596_MOESM4_ESM.xlsx-ST12_Significant_Genes_combine-Unnamed_1_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
proteinprotein	GeneRIF Biological Term Annotations	1.0	null
PMC12129841-10875_2025_1896_MOESM1_ESM.pdf-0-BACH2_BACH2	Rummagene Transcription Factor Associations 2026	1.0	null
BL5138 (GSK3B)	NURSA Protein Complexes	1.0	null
Cataract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.283
BL2492 (PARP10)	NURSA Protein Complexes	1.0	null
Leukopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.59
Biliary tract disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.947
GTEX-SNOS-0008-SM-4DM6I	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08105
skeletalmuscle_e	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.32815
PMC2975936__F1	PFOCR Pathway Figure Associations 2024	1.0	null
allele	GeneRIF Biological Term Annotations	1.0	null
early	GeneRIF Biological Term Annotations	1.0	null
hippocampus (hippocampal formation)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.42017
Atherosclerosis	CTD Gene-Disease Associations	1.0	1.53234
BL6872 (ALMS1)	NURSA Protein Complexes	1.0	null
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939231
Synovitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.123
BL2792 (TRIM24)	NURSA Protein Complexes	1.0	null
Complement cascade	Reactome Pathways 2014	1.0	null
c3d	GeneRIF Biological Term Annotations	1.0	null
GSE158182_4_v_7_pnpla3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Thrombophilia due to activated protein C resistance	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.662
fh19	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.695
ige immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.22828
adult-onset leukoencephalopathy with axonal spheroids and pigmented glia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.053
Hypothyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121
ES-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CL11	CCLE Cell Line Gene CNV Profiles	-1.0	-2.06386
regulation of apoptotic cell clearance	GO Biological Process Annotations 2023	1.0	null
BL2640 (TERF2)	NURSA Protein Complexes	1.0	null
GSE178907_4_v_3_fkrp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
antibody	GeneRIF Biological Term Annotations	1.0	null
Hereditary angioedema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.135
cytoplasmic vesicle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.205059
GTEX-N7MS-0011-R3a-SM-33HC6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.848588
BL2791 (PTEN)	NURSA Protein Complexes	1.0	null
Lung	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	0.825891
Chromosomal duplication syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	2.03801
BL6076 (CCNE1)	NURSA Protein Complexes	1.0	null
BL3342 (EVI5)	NURSA Protein Complexes	1.0	null
GTEX-T2IS-0626-SM-32QP6	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0158
hypersensitivity reaction disease	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
GSE148262,GSE150691_1_v_0_hdlbp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HPAF-II	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.930179
reflect	GeneRIF Biological Term Annotations	1.0	null
Alzheimer disease specific cell type	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.831
Retinal pigment epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.811
Ovary	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.083
Colitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.898
Nde	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.92
recruits	GeneRIF Biological Term Annotations	1.0	null
plasmaderived	GeneRIF Biological Term Annotations	1.0	null
Hodgkin's lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.08
MEC2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34734
collagen-containing extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.997
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157K_vs_MSX1-Gene_id_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
BL1741 (CDK7)	NURSA Protein Complexes	1.0	null
activator	GeneRIF Biological Term Annotations	1.0	null
Thrombocytopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.062
GTEX-Q2AG-1126-SM-48U1P	GTEx Tissue Sample Gene Expression Profiles	1.0	0.985161
BL5519 (PCNT)	NURSA Protein Complexes	1.0	null
Hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.756
Fc-gamma receptor III complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.746
schizophrenia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.160948
GTEX-UJMC-0226-SM-4IHLH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.67429
Hepatitis	CTD Gene-Disease Associations	1.0	1.52963
Immune System	Reactome Pathways 2014	1.0	null
microvascular endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.354826
Pertussis	KEGG Pathways 2026	1.0	null
PMC2780838__F1	PFOCR Pathway Figure Associations 2024	1.0	null
POLR2AphosphoS5_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTEX-SE5C-0926-SM-4BRUF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.03237
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.09164
c211	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.649
PK1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32464
Neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.718
Primary Biliary Cirrhosis	DisGeNET Gene-Disease Associations	1.0	null
BL4165 (DTL)	NURSA Protein Complexes	1.0	null
VMRC-RCW	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF431_01_128	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	1.94316
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14475
graft-versus-host disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.049
BL2182 (TSC2)	NURSA Protein Complexes	1.0	null
NCI-H2405	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
PMC11906355-41588_2025_2089_MOESM4_ESM.xlsx-ST12-Unnamed_6_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
Lung Neoplasms	CTD Gene-Disease Associations	1.0	1.05386
Bone disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
Atopic dermatitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.963
Lewy body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.908
ramos cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.13235
BL2032 (RFWD2)	NURSA Protein Complexes	1.0	null
cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.321909
NB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34302
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044846
PMC8052535__F1	PFOCR Pathway Figure Associations 2024	1.0	null
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2972
Focal segmental glomerulosclerosis 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.068
Amylin receptor complex 1	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.018
SK-OV-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
b21	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.807
Uveal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.509
DNA recombinase mediator complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.752
Venous insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.226
PMC6876298__F2	PFOCR Pathway Figure Associations 2024	1.0	null
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.907258
BL2452 (TGFB1I1)	NURSA Protein Complexes	1.0	null
G37868ZX	GlyGen Glycosylated Proteins	1.0	null
tick-borne relapsing fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.963
Basement membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.888
any	GeneRIF Biological Term Annotations	1.0	null
Exanthema	CTD Gene-Disease Associations	1.0	1.04721
BL8288 (TOR1AIP1)	NURSA Protein Complexes	1.0	null
GTEX-NFK9-1726-SM-3TW8P	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0628
Granulomatosis with polyangiitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.23
Asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.626
Carcinoma, Squamous Cell	CTD Gene-Disease Associations	1.0	1.06987
GTEX-OIZG-0726-SM-33HBL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08225
Basophil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.498
detecting	GeneRIF Biological Term Annotations	1.0	null
Degenerative disc disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.149
Bladder	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.317
primary	GeneRIF Biological Term Annotations	1.0	null
GTEX-RWS6-0001-SM-3NMAL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.09608
capan2	HPA Cell Line Gene Expression Profiles	-1.0	-1.12804
Proteinuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.255
Chronic Central Serous Chorioretinopathy	DisGeNET Gene-Disease Associations	1.0	null
recipients	GeneRIF Biological Term Annotations	1.0	null
respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.043727
Cecum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.255
vesicle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
dysfunction	GeneRIF Biological Term Annotations	1.0	null
KM-12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.23061
Pharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.328
antibodymediated	GeneRIF Biological Term Annotations	1.0	null
BL5039 (CHD9)	NURSA Protein Complexes	1.0	null
H3K27me3_megakaryocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regulation of apoptotic cell clearance	GO Biological Process Annotations 2025	1.0	null
Hematopoietic cell	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
GTF2B_01_362	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.59845
Perturb_12233_KD_STAT3_SRP081918	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-18.4202
Nasal cavity disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.88616
PTPN9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74973
BL700 (DIDO1)	NURSA Protein Complexes	1.0	null
Tear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.613
TFAP2C	JASPAR Predicted Transcription Factor Targets	1.0	null
noninvasive	GeneRIF Biological Term Annotations	1.0	null
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GTEX-UJHI-1426-SM-3DB9C	GTEx Tissue Sample Gene Expression Profiles	1.0	0.915707
hyperplasia	GeneRIF Biological Term Annotations	1.0	null
variety	GeneRIF Biological Term Annotations	1.0	null
BL2798 (CCNA1)	NURSA Protein Complexes	1.0	null
BL2753 (LCOR)	NURSA Protein Complexes	1.0	null
Hypersensitivity reaction type IV disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.955
BL7552 (DICER1)	NURSA Protein Complexes	1.0	null
Petiole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.691
Burkitt Lymphoma	DisGeNET Gene-Disease Associations	1.0	null
Skin Neoplasms	CTD Gene-Disease Associations	1.0	1.05828
Upper respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.563
u26684	HPA Cell Line Gene Expression Profiles	1.0	1.21992
Breast medullary carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.113
there	GeneRIF Biological Term Annotations	1.0	null
Lupus Erythematosus, Systemic	HuGE Navigator Gene-Phenotype Associations	1.0	null
Plant embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.816
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.863156
PMC10769314-NIHMS1954782-supplement-9.xlsx-Table_S7B-Table_S7B_Frontal_cortex_relative_gene_expression_from_post-KD_and_pre-KD_recipient_mice_AR	Rummagene Transcription Factor Associations 2026	1.0	null
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22998
Neuropathy	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.048999
PU-27001747-CHIP-SEQ-BMDM-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
TYK-NU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928975
Fever	CTD Gene-Disease Associations	1.0	1.13109
after	GeneRIF Biological Term Annotations	1.0	null
donorspecific	GeneRIF Biological Term Annotations	1.0	null
PMC3140475__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Autoimmune disease of endocrine system	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.828
amygdaloid complex_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.15707
Skeletal system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
PMC6522855__F2	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-RUSQ-0926-SM-47JWU	GTEx Tissue Sample Gene Expression Profiles	1.0	0.840731
C1R	Pathway Commons Protein-Protein Interactions	1.0	null
Henoch-Schoenlein purpura	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.608
Pervasive developmental disorder	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.371
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.519
Autoimmune disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
BHK cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.236
HELLP syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.35
pt80	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.507
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.860157
ovary	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.301398
hemolytic-uremic syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.234
hippocampus (hippocampal formation)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01677
BL4187 (USP19)	NURSA Protein Complexes	1.0	null
GTEX-N7MS-0007-SM-2D7W1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.11841
BL1477 (PNKP)	NURSA Protein Complexes	1.0	null
Astrocyte end-foot	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.534
extracellular space	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
BL1000 (FANCI)	NURSA Protein Complexes	1.0	null
BL6649 (GRB10)	NURSA Protein Complexes	1.0	null
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.554
BL4978 (USP48)	NURSA Protein Complexes	1.0	null
Ferritin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.581
Chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.455
PMC10353540-Table_1.xlsx-HCC1954_AR_vs_HCC1954_A-ID_AR	Rummagene Transcription Factor Associations 2026	1.0	null
mediodorsal nucleus of thalamus_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.63822
observation	GeneRIF Biological Term Annotations	1.0	null
hypersensitivity reaction disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.418019
Plumule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.813
GSE135030_3_v_7_fludarabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
BL8517 (CKAP2L)	NURSA Protein Complexes	1.0	null
GTEX-XPT6-2026-SM-4B64V	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00746
GTEX-P4QS-2626-SM-2I3EV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.03203
PMC12433390-262_2025_4164_MOESM1_ESM.pdf-94-Liver_TLF_TBPL1	Rummagene Transcription Factor Associations 2026	1.0	null
Perturb_6615_OE_MATR3_SRP132715	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-3.9633
Vaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.55
PMC6326667__F5	PFOCR Pathway Figure Associations 2023	1.0	null
membranoproliferative	GeneRIF Biological Term Annotations	1.0	null
PMC5166441__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC2738133__F3	PFOCR Pathway Figure Associations 2023	1.0	null
strongest	GeneRIF Biological Term Annotations	1.0	null
BL2444 (RPL7)	NURSA Protein Complexes	1.0	null
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-S32W-1926-SM-4AD63	GTEx Tissue Sample Gene Expression Profiles	1.0	1.47061
Heart - Left Ventricle	GTEx Tissue Gene Expression Profiles 2023	1.0	5.06361
Contact dermatitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.963
Interstitial nephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.14
Diabetes Mellitus	DisGeNET Gene-Disease Associations	1.0	null
SC-6233 (ATF2)	NURSA Protein Complexes	1.0	null
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157S_vs_MSX1-Gene_name_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
striatum_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.28552
Neutrophil extracellular trap	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.69
hippocampus (hippocampal formation)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.3587
Attention deficit hyperactivity disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.287
G81263BG	GlyGen Glycosylated Proteins	1.0	null
Serine protease inhibitor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.885
GTEX-RNOR-1426-SM-48FDJ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.896486
Hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.981
Hypersensitivity reaction type IV disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.46
Autoimmune disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.898
stem	GeneRIF Biological Term Annotations	1.0	null
response to molecule of bacterial origin	GO Biological Process Annotations 2023	1.0	null
GTEX-WYJK-1726-SM-3NM9U	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1699
c91	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.617
although	GeneRIF Biological Term Annotations	1.0	null
Nasopharynx epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.632
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856085
BL1753 (MED14)	NURSA Protein Complexes	1.0	null
Filtration diaphragm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.97
Metacestode	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.759
BL4782 (AKT1S1)	NURSA Protein Complexes	1.0	null
GSE121198,GSE129779_3_v_2_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-R53T-0226-SM-48FEH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.30857
Regulation of Complement cascade	Reactome Pathways 2014	1.0	null
Lyme disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.959
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.17044
S100A8 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.558
aspergillus	GeneRIF Biological Term Annotations	1.0	null
PMC5711528__F2	PFOCR Pathway Figure Associations 2024	1.0	null
SETDB1-19884257-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Thorny excrescence	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.53
Diabetes Mellitus, Type 1	HuGE Navigator Gene-Phenotype Associations	1.0	null
Phagocytic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.793
PMC7310461__F3	PFOCR Pathway Figure Associations 2023	1.0	null
PMC7773221__F2	PFOCR Pathway Figure Associations 2024	1.0	null
BL6487 (ERF)	NURSA Protein Complexes	1.0	null
GTEX-RWSA-0008-SM-47JYX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.12944
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.2739
PMC5019180__F2	PFOCR Pathway Figure Associations 2024	1.0	null
lung	GeneRIF Biological Term Annotations	1.0	null
Cornu ammonis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.681
NCIH2286	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35089
SC-5606 (XRCC4)	NURSA Protein Complexes	1.0	null
PMC7397849-supp_gad.338681.120_Supplemental_Table_S2.xlsx-S2B_in_vivo_shared-Suppl_Table_S2B_shared_genes_between_RCAS-YAP1-MAMLD1-dR3R1_RCAS-YAP1-FAM118B_RCAS-YAP1-TFE3_in_vivo_tumors_RCAS_mouse_TFE3	Rummagene Transcription Factor Associations 2026	1.0	null
carp	GeneRIF Biological Term Annotations	1.0	null
PMC9672399__F5	PFOCR Pathway Figure Associations 2024	1.0	null
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.01273
t67-small-intestine_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	1.49062
cd59	GeneRIF Biological Term Annotations	1.0	null
than	GeneRIF Biological Term Annotations	1.0	null
GTEX-OXRP-0006-SM-2I3FN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.43795
Acute kidney tubular necrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
autism spectrum disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.772479
H1_BMP4_Derived_Mesendoderm_Cultured_Cells	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-1.01243
Renal glomerulus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.947
patient	GeneRIF Biological Term Annotations	1.0	null
brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.043736
BL6260 (MBD4)	NURSA Protein Complexes	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059231
BL4014 (BCAS3)	NURSA Protein Complexes	1.0	null
Anemia	CTD Gene-Disease Associations	1.0	1.18981
PMC11383936-41598_2024_71738_MOESM6_ESM.xlsx-DEPs_LMS_-_vs_HC-Unnamed_4_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
BL8111 (RAD54L2)	NURSA Protein Complexes	1.0	null
biomarkers	GeneRIF Biological Term Annotations	1.0	null
PMC7956994__F1	PFOCR Pathway Figure Associations 2024	1.0	null
transplantation	GeneRIF Biological Term Annotations	1.0	null
BL586 (FEN1)	NURSA Protein Complexes	1.0	null
G05724UK	GlyGen Glycosylated Proteins	1.0	null
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.503
Buccal epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.73
Coronavirus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.92
PMC10260721-43657_2023_100_MOESM11_ESM.xlsx-MR_for_UKB_diseases_FDR_0_05-Gene_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
PMC11615365-41467_2024_54246_MOESM6_ESM.xlsx-KK47-Numb-KD_vs_Ctr-KD-geneSymbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
chr6_31746254_G_A_b38	GTEx eQTL 2025	1.0	3.78686
Mast cell granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.533
Sudden infant death syndrome SIDS susceptibility pathways	WikiPathways Pathways 2024	1.0	null
SC-12340R (CDC2)	NURSA Protein Complexes	1.0	null
bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.440914
Primary systemic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0072
Curli	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.201
platelet	GeneRIF Biological Term Annotations	1.0	null
nervous system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
dorsolateral prefrontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.12199
BL4398 (ARFGEF2)	NURSA Protein Complexes	1.0	null
biofilm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.413912
BL4054 (USP33)	NURSA Protein Complexes	1.0	null
GTEX-Q734-0326-SM-48U15	GTEx Tissue Sample Gene Expression Profiles	1.0	1.82168
axis	GeneRIF Biological Term Annotations	1.0	null
BL4287 (PPP2R5A)	NURSA Protein Complexes	1.0	null
15897907-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
Autoimmune disease of the nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.145
louse-borne relapsing fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.946
independent	GeneRIF Biological Term Annotations	1.0	null
BL2295 (EDC4)	NURSA Protein Complexes	1.0	null
PMC4143352__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Astroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.183
PMC6206158__F1	PFOCR Pathway Figure Associations 2024	1.0	null
sensitized	GeneRIF Biological Term Annotations	1.0	null
BL3609 (MAZ)	NURSA Protein Complexes	1.0	null
RXRA-24833708-LIVER-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Peritoneal macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.267
GTEX-NFK9-0626-SM-2HMIV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.836612
CBC802 ()	NURSA Protein Complexes	1.0	null
Hematopoietic system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
PMC11923433-BLOOD_BLD-2024-025618-mmc2.xlsx-S3_Specific_genes_in_CEBPA-dm-Supplemental_Table_3_The_subtype-specific_enriched_marker_genes_in_CEBPA-dm_subtype_patients_CEBPA	Rummagene Transcription Factor Associations 2026	1.0	null
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	2.22668
BL1461 (MAD2L1)	NURSA Protein Complexes	1.0	null
GTEX-VJYA-0626-SM-4KL1S	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08208
BL2667 (HDAC2)	NURSA Protein Complexes	1.0	null
Autoimmune Diseases	HuGE Navigator Gene-Phenotype Associations	1.0	null
GSE95077_1_v_3_amiloride_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Inherited metabolic disorder	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.869
Phagocyte	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
detected	GeneRIF Biological Term Annotations	1.0	null
BL1544 (TTK)	NURSA Protein Complexes	1.0	null
Capillary endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.949
GSE214335_1_v_0_sox9_human	RummaGEO Gene Perturbation Signatures	1.0	null
uveal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.506123
SETDB1-19884257-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
Interferon regulatory factor 7 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.763
PMC4381956__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.223
PMC9235320-mmc2.xlsx-ST9_eQTL-MR-results-Unnamed_1_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
adrenal hyperplasia, congenital; autoimmune diseases; opportunistic infections; recurrence	GAD Gene-Disease Associations	1.0	null
GTEX-QDVN-1126-SM-48TZ7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.930624
Regulation of Complement cascade	Reactome Pathways 2024	1.0	null
choroid plexus	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PMC7354282__F4	PFOCR Pathway Figure Associations 2024	1.0	null
specific	GeneRIF Biological Term Annotations	1.0	null
PMC3091762__F9	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-UTHO-0726-SM-3GAEN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.835616
prognostic	GeneRIF Biological Term Annotations	1.0	null
possibly	GeneRIF Biological Term Annotations	1.0	null
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.4149
H3K4me1_erythroblast_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
GSE238018_3_v_0_mxra8_human	RummaGEO Gene Perturbation Signatures	1.0	null
colocalizes	GeneRIF Biological Term Annotations	1.0	null
GTEX-OHPM-0008-SM-4E3IP	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08174
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.14849
Inferior vena cava	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.897
Necrosis	CTD Gene-Disease Associations	1.0	2.40848
BL1036 (KDM1)	NURSA Protein Complexes	1.0	null
BL2849 (MED28)	NURSA Protein Complexes	1.0	null
SEC16A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97598
FCN3	Pathway Commons Protein-Protein Interactions	1.0	null
EFO-27	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BL3631 (KDM2A)	NURSA Protein Complexes	1.0	null
Buffy coat	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.249
NCI-H2170	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Complement activation	WikiPathways Pathways 2024	1.0	null
Frontal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.778
GTEX-R55D-0626-SM-3GAD5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.71341
onset	GeneRIF Biological Term Annotations	1.0	null
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
middle ear disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.167224
Colon carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.181
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.808
Hemoglobinuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.312
BL5973 (ZC3H11A)	NURSA Protein Complexes	1.0	null
GSE216043_7_v_5_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31925
Brain endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.602
GTEX-SNOS-0726-SM-4DM5Z	GTEx Tissue Sample Gene Expression Profiles	1.0	0.84448
adrenal_4d	HPA Tissue Sample Gene Expression Profiles	1.0	1.25812
RFX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.655
blood microparticle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
GTEX-R55G-0126-SM-48FDS	GTEx Tissue Sample Gene Expression Profiles	1.0	1.69353
KMM1	CCLE Cell Line Gene CNV Profiles	1.0	1.58962
GSE229973_3_v_5_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Neutropenia	CTD Gene-Disease Associations	1.0	1.18126
GTEX-X4EP-0726-SM-3P5YJ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.984439
lymphoid cell	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Salt-Losing Congenital Adrenal Hyperplasia	DisGeNET Gene-Disease Associations	1.0	null
Protozoan form	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.608
indicates	GeneRIF Biological Term Annotations	1.0	null
Malignant hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.156
BL4957 (ZNHIT3)	NURSA Protein Complexes	1.0	null
SC-25378 (KAT5)	NURSA Protein Complexes	1.0	null
GTEX-O5YV-0526-SM-2I5GE	GTEx Tissue Sample Gene Expression Profiles	1.0	0.834779
PMC11747033-Table1.xlsx-Sup_Table_S1-IFNy_LPS_TREATED_HMEC_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H2452	COSMIC Cell Line Gene Mutation Profiles	1.0	null
fh23	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.888
BL5784 (WDR44)	NURSA Protein Complexes	1.0	null
SC-33172 (GADD45B)	NURSA Protein Complexes	1.0	null
BL5856 (CDCA3)	NURSA Protein Complexes	1.0	null
Kuhnt-Junius degeneration	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.948
Attention Deficit Disorder	DisGeNET Gene-Disease Associations	1.0	null
PANC 04.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.33849
PMC11747033-Table3.xlsx-Sup_Table_S3-IFNy_LPS_TREATED_HMEC_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
BL2441 (RNF4)	NURSA Protein Complexes	1.0	null
PMC4022110__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Middle frontal gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.856
Storage vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.672
Leukopenia	CTD Gene-Disease Associations	1.0	1.10033
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-1.41326
GSE169356_0_v_5_ivermectin_human	RummaGEO Drug Perturbation Signatures	1.0	null
BL3434 (CRTC1)	NURSA Protein Complexes	1.0	null
GTEX-R55C-1726-SM-3GADJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.39185
MDBK cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.603
review	GeneRIF Biological Term Annotations	1.0	null
biopsy	GeneRIF Biological Term Annotations	1.0	null
BL6566 (KNTC1)	NURSA Protein Complexes	1.0	null
BL616 (CUL9)	NURSA Protein Complexes	1.0	null
Cerebral degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
BL6398 (BCAR3)	NURSA Protein Complexes	1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Viral infectious disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.894
CBC691 (GTPBP2)	NURSA Protein Complexes	1.0	null
Lymphoid follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.807
16207250-TableS2	GeneSigDB Published Gene Signatures	1.0	null
GTEX-UPJH-0006-SM-3GACW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.905695
GTEX-WCDI-0005-SM-3NB2M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04029
Immune System Diseases	CTD Gene-Disease Associations	1.0	1.10175
PMC5241319__F3	PFOCR Pathway Figure Associations 2024	1.0	null
SC-7160 (XBP1)	NURSA Protein Complexes	1.0	null
free	GeneRIF Biological Term Annotations	1.0	null
th1	GeneRIF Biological Term Annotations	1.0	null
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22998
vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.051167
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
18310505-TableS1	GeneSigDB Published Gene Signatures	1.0	null
connective tissue disease	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
BL2229 (FIGNL1)	NURSA Protein Complexes	1.0	null
19204204-SupplementaryTable7	GeneSigDB Published Gene Signatures	1.0	null
GTEX-WRHK-1626-SM-3MJFH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.8572
Renal Insufficiency	CTD Gene-Disease Associations	1.0	1.03567
does	GeneRIF Biological Term Annotations	1.0	null
dxb11	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.807
extracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
out	GeneRIF Biological Term Annotations	1.0	null
Complement Activation, Classical Pathway(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
Urticaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.183
serine-type peptidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.275
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.998424
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056122
Acquired angioedema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.576
Phagocytic vesicle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.736
small	GeneRIF Biological Term Annotations	1.0	null
BL8602 (MAST2)	NURSA Protein Complexes	1.0	null
Reproductive organ cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
control	GeneRIF Biological Term Annotations	1.0	null
GTEX-R3RS-0626-SM-48FE1	GTEx Tissue Sample Gene Expression Profiles	1.0	0.839371
BL3752 (CBX8)	NURSA Protein Complexes	1.0	null
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.8361
Arthus reaction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.133
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.923687
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.567
head	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GSE158182_3_v_0_pnpla3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BL3066 (PPM1D)	NURSA Protein Complexes	1.0	null
PMC4252624__F6	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-OHPM-1626-SM-2HMK4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08205
GTEX-TKQ2-0226-SM-4DM6V	GTEx Tissue Sample Gene Expression Profiles	1.0	1.57539
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46527
BL441 (CREBBP)	NURSA Protein Complexes	1.0	null
PMC8080439__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Middle ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.835
Acute proliferative glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.175
ZBTB18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0671
ZR-75-30	COSMIC Cell Line Gene Mutation Profiles	1.0	null
diffuse	GeneRIF Biological Term Annotations	1.0	null
Blood clot	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.757
PMC8744330-13024_2021_507_MOESM2_ESM.xlsx-Table_S5-Supplementary_Table_5_The_conserved_3-layer_neighborhood_of_TP53_in_the_co-expression_networks_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.3849
BL756 (CSNK2A2)	NURSA Protein Complexes	1.0	null
PMC5075576__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Cerebral amyloid angiopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.376
GTEX-SNMC-1426-SM-2XCFM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.30051
PMC5497057-ncomms15921-s2.xlsx-AA_PCa_vs_AA_NP-Unnamed_2_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
C6/36 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.62
near	GeneRIF Biological Term Annotations	1.0	null
NarGHI complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.58
autistic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.801154
remission	GeneRIF Biological Term Annotations	1.0	null
BL169 (TP53)	NURSA Protein Complexes	1.0	null
mt2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.988
Micronuclei, Chromosome-Defective	CTD Gene-Disease Associations	1.0	1.37561
autoimmune disease of urogenital tract	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.639463
arteriolar	GeneRIF Biological Term Annotations	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058424
Ebola hemorrhagic fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.079
Leptomeninx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.761
Age related macular degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.259
Hemolytic disease of the fetus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.288
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
GATA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4286
Meningitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.069
low-density lipoprotein receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.997
mRNA_MYOD1_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
index	GeneRIF Biological Term Annotations	1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.820437
secondary	GeneRIF Biological Term Annotations	1.0	null
morphological	GeneRIF Biological Term Annotations	1.0	null
phosphorylation	GeneRIF Biological Term Annotations	1.0	null
BL265 (MCM7)	NURSA Protein Complexes	1.0	null
SUDHL6	CCLE Cell Line Gene CNV Profiles	1.0	1.84975
GTEX-R55G-0006-SM-2TC6O	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.36688
extracellular region part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Autoimmune disease of peripheral nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.596
Peripheral nervous system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
Intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.883
SRF	JASPAR Predicted Transcription Factor Targets	1.0	null
CBC174 (AGAP3)	NURSA Protein Complexes	1.0	null
15361855-SuppTable1	GeneSigDB Published Gene Signatures	1.0	null
WIL2-NS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.596
PMC8786143__F1	PFOCR Pathway Figure Associations 2024	1.0	null
22RV1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Metabolic dysfunction and alcohol associated liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.757
Complement and coagulation cascades	WikiPathways Pathways 2024	1.0	null
Huntington's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.375
Erythema nodosum	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.028
D-566MG	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-WY7C-0926-SM-3NB34	GTEx Tissue Sample Gene Expression Profiles	1.0	0.963579
often	GeneRIF Biological Term Annotations	1.0	null
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.82973
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Syphilis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.461
PMC5513767__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Orthogonal array	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.614
GTEX-OHPL-0006-SM-3MJHB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.14705
BL5621 (AKAP1)	NURSA Protein Complexes	1.0	null
PMC6177401__F3	PFOCR Pathway Figure Associations 2023	1.0	null
BRCA1_02_202	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.59309
hematopoietic cell	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BL5845 (CCDC82)	NURSA Protein Complexes	1.0	null
PMC6177401__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Lateral geniculate nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.634
urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.055055
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.27705
BL2311 (MLLT3)	NURSA Protein Complexes	1.0	null
dosage	GeneRIF Biological Term Annotations	1.0	null
GTEX-S7SF-1026-SM-4AD4I	GTEx Tissue Sample Gene Expression Profiles	1.0	0.97602
GTEX-P4QT-1326-SM-3NMD3	GTEx Tissue Sample Gene Expression Profiles	1.0	1.65344
cofactor	GeneRIF Biological Term Annotations	1.0	null
Cervical epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.681
BL1872 (NCOA6)	NURSA Protein Complexes	1.0	null
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.504
transfected	GeneRIF Biological Term Annotations	1.0	null
oligoarthritis	GeneRIF Biological Term Annotations	1.0	null
phospholipid-translocating ATPase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.663
CTDNEP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78223
cd8 cells	HPM Cell Type and Tissue Protein Expression Profiles	-1.0	-1.09071
Granulomatous angiitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.062
LNCaP-C4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.796
GTEX-TSE9-0005-SM-4DXUF	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.975007
Kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.375
496100574_HIP_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.51247
GTEX-S32W-0726-SM-2XCBL	GTEx Tissue Sample Gene Expression Profiles	1.0	0.97136
GTEX-VUSH-0004-SM-3P61T	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.0999
SC-48809 (RFX1)	NURSA Protein Complexes	1.0	null
Rapidly progressive glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.201
Inflammatory bowel disease	GWAS Catalog SNP-Phenotype Associations 2025	1.0	3.0699
longevity	GAD Gene-Disease Associations	1.0	null
PMC10020087-41388_2023_2602_MOESM3_ESM.xlsx-MCF10A_KD-GeneName_AR	Rummagene Transcription Factor Associations 2026	1.0	null
while	GeneRIF Biological Term Annotations	1.0	null
BL4905 (C19orf2)	NURSA Protein Complexes	1.0	null
Immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.668
MHC protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.9
infectious	GeneRIF Biological Term Annotations	1.0	null
Epilepsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.475
ventrolateral prefrontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.835033
PMC5195898-NIHMS825571-supplement-3.xlsx-Sheet1-H1975_M1_vs_H1975_M1_CIC_reconstitution_Differential_gene_expression_CIC	Rummagene Transcription Factor Associations 2026	1.0	null
polymerase	GeneRIF Biological Term Annotations	1.0	null
Stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.186
confirmed	GeneRIF Biological Term Annotations	1.0	null
Pericardium disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.298
BL4783 (AKT1S1)	NURSA Protein Complexes	1.0	null
BL2054 (ESR1)	NURSA Protein Complexes	1.0	null
bleomycin_mus musculus_gpl1261_gse25640	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TCF21-23034159-E13_GONADS-RAT	ChEA Transcription Factor Binding Site Profiles	1.0	null
Learning Disorders	CTD Gene-Disease Associations	1.0	1.26825
neuroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087607
complement and coagulation cascades	KEGG Pathways	1.0	null
appears	GeneRIF Biological Term Annotations	1.0	null
GTEX-PLZ4-2826-SM-3P617	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09656
HCC364	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.11518
Eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.143
GTEX-XV7Q-0005-SM-4BRWI	GTEx Tissue Sample Gene Expression Profiles	1.0	0.860086
NKX2-8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.0865
associate	GeneRIF Biological Term Annotations	1.0	null
BL9239 (GREB1)	NURSA Protein Complexes	1.0	null
Nephritis, Interstitial	CTD Gene-Disease Associations	1.0	1.19999
Perturb_14120_OE_TINCR_SRP182819	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-19.699
PMC3641842__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC9424213-41467_2022_32537_MOESM6_ESM.xlsx-siHNRNPK_cyto-DEGs_for_hnRNPK_KD_cytoplasmic_RNA_of_HeLa_cells_AR	Rummagene Transcription Factor Associations 2026	1.0	null
amygdaloid complex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.38872
nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Encephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.708
496100447_HIP_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.24204
concentration	GeneRIF Biological Term Annotations	1.0	null
GTEX-P4QS-1626-SM-2S1NH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.831371
Li	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.433
Brown Pearce carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.84
positive regulation of apoptotic cell clearance	GO Biological Process Annotations 2025	1.0	null
retinal vasculitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.944106
same	GeneRIF Biological Term Annotations	1.0	null
trimolecular	GeneRIF Biological Term Annotations	1.0	null
Bone_Marrow-plasma cell	Tabula Sapiens Gene-Cell Associations	1.0	1.03308
GTEX-TMMY-0126-SM-4DXTP	GTEx Tissue Sample Gene Expression Profiles	1.0	0.959027
Blood coagulation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.479
TGIF2LX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6228
GTEX-PVOW-0126-SM-2XCFA	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08254
BL2270 (TCF12)	NURSA Protein Complexes	1.0	null
ovary	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Oligodendrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.942
PMC3879300-pone.0084292.s002.xlsx-SPD_dataset-Gene_symbol_HOXD13	Rummagene Transcription Factor Associations 2026	1.0	null
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048517
BL2269 (TDP1)	NURSA Protein Complexes	1.0	null
liver	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
TP63	ChEA Transcription Factor Targets	1.0	null
BL4677 (DBF4)	NURSA Protein Complexes	1.0	null
BL5424 (ERCC3)	NURSA Protein Complexes	1.0	null
BL8796 (DAB2IP)	NURSA Protein Complexes	1.0	null
Microglial cell_Cortex_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
Rectum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.6
GTEX-OXRK-0126-SM-3NB1E	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14582
PMC4381956__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
BL1999 (DDB1)	NURSA Protein Complexes	1.0	null
Blood vessel endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.227
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.871858
Juvenile rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.171
Acrodermatitis chronica atrophicans	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.25
GSE152699,GSE152723_3_v_1_vemurafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-RU72-0126-SM-2TF6Z	GTEx Tissue Sample Gene Expression Profiles	1.0	1.32185
GSE202434,GSE202438_15_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-XXEK-0004-SM-4BRWO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.15872
ASAP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.467
phagocytosis	GeneRIF Biological Term Annotations	1.0	null
BL2852 (MED18)	NURSA Protein Complexes	1.0	null
SPI1	ChEA Transcription Factor Targets	1.0	null
Amyotrophic lateral sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.556
Marrow cell	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
meningitis, bacterial	GAD Gene-Disease Associations	1.0	null
IgG immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.226
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.72654
RCC-FG2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
transplants	GeneRIF Biological Term Annotations	1.0	null
total	GeneRIF Biological Term Annotations	1.0	null
moieties	GeneRIF Biological Term Annotations	1.0	null
GTEX-REY6-0005-SM-2TF54	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.943268
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826486
GTEX-TKQ1-0006-SM-33HBI	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.47675
GTEX-XQ8I-0006-SM-4BOQ5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.987095
GSE184087_0_v_5_tert_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-UJHI-1526-SM-3DB99	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.860525
Purpura fulminans	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.683
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	91.1242
soluble	GeneRIF Biological Term Annotations	1.0	null
markers	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BL1074 (AURKB)	NURSA Protein Complexes	1.0	null
PAQR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8187
milk	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BL2451 (TGFB1I1)	NURSA Protein Complexes	1.0	null
GTEX-XPT6-0008-SM-4B64Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.864949
complete	GeneRIF Biological Term Annotations	1.0	null
SC-50347 (PIAS4)	NURSA Protein Complexes	1.0	null
GTEX-UPJH-0526-SM-4IHK8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.71431
BL5634 (AKAP12)	NURSA Protein Complexes	1.0	null
ZNF395_02_69	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.58843
Large intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.883
THP1	CCLE Cell Line Gene CNV Profiles	1.0	1.4369
Dermatitis	DisGeNET Gene-Disease Associations	1.0	null
CBC2152 (RFWD3)	NURSA Protein Complexes	1.0	null
adiposetissue	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.57981
CBC184 (BICD2)	NURSA Protein Complexes	1.0	null
BL2127 (HDAC3)	NURSA Protein Complexes	1.0	null
membrane-bounded vesicle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
GTEX-VUSG-1526-SM-4KKZH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.1974
PMC7550403__F1	PFOCR Pathway Figure Associations 2024	1.0	null
H3K4me1_bone marrow macrophage_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.888
Retinal detachment	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.216
BL7526 (SOS2)	NURSA Protein Complexes	1.0	null
pathological	GeneRIF Biological Term Annotations	1.0	null
hippocampus (hippocampal formation)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.02086
excretory gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Glomerulonephritis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.954
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.76
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-D_ATF4-def_vs_HCT116_Tg2-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
BL3734 (CBX4)	NURSA Protein Complexes	1.0	null
Central nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.787
PMC11194396-Table_1.xlsx-table2-Table2_Pleiotropy_test_results_of_23_potential_diabetes_prevention_drug_targets_identified_in_the_dual_sample_MR_phase_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
Hypertrophy	CTD Gene-Disease Associations	1.0	2.05155
GTEX-SN8G-0006-SM-32PLD	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.41147
Outer membrane protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.463
BL1777 (C21orf7)	NURSA Protein Complexes	1.0	null
otitis media	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.210589
CEBPB-20176806-THIOMACROPHAGE-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.848716
Tumor necrosis factor receptor superfamily complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.971
OVCAR8	CCLE Cell Line Gene CNV Profiles	1.0	1.33412
CBC22 (MLST8)	NURSA Protein Complexes	1.0	null
Perturb_8499_OE_MYC_SRP150620	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-15.9559
bacterial-type flagellum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.56
Retina	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.433
Liver Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.47762
PMC5644625__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Amyloidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.728
GTEX-SNOS-1526-SM-32PLW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.66613
genetic	GeneRIF Biological Term Annotations	1.0	null
GTEX-SUCS-0226-SM-32PLQ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.860323
BL2837 (UIMC1)	NURSA Protein Complexes	1.0	null
Heparanase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.804
BL6598 (FBXW7)	NURSA Protein Complexes	1.0	null
such	GeneRIF Biological Term Annotations	1.0	null
Osteomyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.029
Neonatal Systemic Lupus Erythematosus	DisGeNET Gene-Disease Associations	1.0	null
PMC5053787__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC5053787__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.955685
Hypersensitivity reaction disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.955
PMC8987207-DataSheet_1.xls-TF_targets_Fig_2A-EGR1_DC_ChIP-seq_EGR1	Rummagene Transcription Factor Associations 2026	1.0	null
Chronic Active Hepatitis	DisGeNET Gene-Disease Associations	1.0	null
ns1	GeneRIF Biological Term Annotations	1.0	null
GTEX-XYKS-1726-SM-4E3IO	GTEx Tissue Sample Gene Expression Profiles	1.0	1.20253
PMC11953390-41598_2025_94761_MOESM1_ESM.xlsx-Table_S3-Table_S3_The_result_of_MR_analysis_and_sensitivity_analysis_for_CKD_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-POMQ-1426-SM-3P61D	GTEx Tissue Sample Gene Expression Profiles	1.0	1.3336
ATAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69133
Brain ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.273
fluorescence	GeneRIF Biological Term Annotations	1.0	null
OV56	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.22396
graft	GeneRIF Biological Term Annotations	1.0	null
DPYSL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61494
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23632
Tonsillitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
Schizont	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.023
primary auditory cortex (core)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.07856
U87MG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51338
GSE181461_1_v_4_trim28_human	RummaGEO Gene Perturbation Signatures	1.0	null
Periplasmic space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.311
vitreous disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.364824
lectins	GeneRIF Biological Term Annotations	1.0	null
GTEX-XV7Q-1026-SM-4BRVR	GTEx Tissue Sample Gene Expression Profiles	1.0	0.874635
Cervical epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.723
Membrane attack complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.395
GTEX-UPK5-0006-SM-3GAD8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.21214
Leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.744
sc1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.873
PMC3702285-cddis2013211x6.pdf-159-MITF_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
Spinal column	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.142
t60-adrenal_male_1w	MoTrPAC Rat Endurance Exercise Training	1.0	1.73371
Sensory system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Primary thrombocytopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.409
crossmatch	GeneRIF Biological Term Annotations	1.0	null
BL5990 (ZNF592)	NURSA Protein Complexes	1.0	null
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0226
prosc4bp	GeneRIF Biological Term Annotations	1.0	null
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939231
PMC12559107-12035_2025_5221_MOESM1_ESM.xlsx-Supplment_Tab_3-Supplement_Tab_3_The_result_of_MR_analysis_for_SCZ_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
Lymphoproliferative syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.328
autistic	GeneRIF Biological Term Annotations	1.0	null
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.826722
PMC12119775-13402_2024_1033_MOESM1_ESM.pdf-11-ENSG00000177606_JUN	Rummagene Transcription Factor Associations 2026	1.0	null
inactivate	GeneRIF Biological Term Annotations	1.0	null
Pulmonary embolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.497
PMC6172843-13059_2018_1523_MOESM6_ESM.xls-Sheet1-Table_S5_mRNAs_variation_abundance_1_5-fold_in_YBX1-knockdown_BGC-823_cells_YBX1	Rummagene Transcription Factor Associations 2026	1.0	null
BL2454 (ZFPM2)	NURSA Protein Complexes	1.0	null
Peritoneal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.791
GSE174498,GSE174500_0_v_8_asparaginase_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Trypomastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.684
Reservosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.928
c1q	GeneRIF Biological Term Annotations	1.0	null
number	GeneRIF Biological Term Annotations	1.0	null
GTEX-XBEW-1326-SM-4AT63	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.0023
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40449
TGIF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.2691
PMC10771430-42003_2023_5737_MOESM3_ESM.xlsx-S32-Drug-ANM-Supplementary_Data_32_Drug_target_search_for_MR-prioritized_proteins_for_AAM_source_OpenTargets_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-UTHO-2426-SM-4JBHD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.25127
BL2268 (TDP1)	NURSA Protein Complexes	1.0	null
rise	GeneRIF Biological Term Annotations	1.0	null
Uterine disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.163
496100579_HIP_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.20552
BL2223 (COL4A3BP)	NURSA Protein Complexes	1.0	null
Cerebrospinal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.975
GTEX-QEG5-0826-SM-2I5GF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.66599
GSE120612_7_v_0_etoposide_human	RummaGEO Drug Perturbation Signatures	1.0	null
Neuromyelitis optica	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
Complement cascade	Reactome Pathways 2024	1.0	null
Diabetes Mellitus, Type 2	HuGE Navigator Gene-Phenotype Associations	1.0	null
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.854791
Pemphigoid	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.332
GTEX-X8HC-0726-SM-46MWG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.20476
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.94126
CRLS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7971
BL1154 (TYRO3)	NURSA Protein Complexes	1.0	null
NR6A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6524
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
GTEX-SIU7-1626-SM-4BRUK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.52244
BL1774 (STK10)	NURSA Protein Complexes	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.854791
organelle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.074125
Weibel-Palade body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.119
BL4891 (CDC20)	NURSA Protein Complexes	1.0	null
positive	GeneRIF Biological Term Annotations	1.0	null
PMC10115892-41467_2023_37729_MOESM4_ESM.xlsx-Supplementary_Data_22-Supplementary_Data_22_Multivariate_Longevity_Phenome-Wide_Association_Studies_of_Top_Drug-Target_MR_Genes_FinnGen_Release_5_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
preeclamptic	GeneRIF Biological Term Annotations	1.0	null
GTEX-R53T-1826-SM-3GIJX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.985745
BL6033 (WDR42A)	NURSA Protein Complexes	1.0	null
Cell envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.371
BL1751 (MED14)	NURSA Protein Complexes	1.0	null
without	GeneRIF Biological Term Annotations	1.0	null
behcet	GeneRIF Biological Term Annotations	1.0	null
Fibrosis	CTD Gene-Disease Associations	1.0	1.98153
Paracoccidioidomycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.219
PMC3766629__F6	PFOCR Pathway Figure Associations 2023	1.0	null
vasculitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.213621
GTEX-WY7C-2526-SM-3NB2N	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.12016
Leprosy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.353
prevalence	GeneRIF Biological Term Annotations	1.0	null
KCI-MOH1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22998
BL2683 (PHLPP2)	NURSA Protein Complexes	1.0	null
GTEX-XBED-1126-SM-48TCF	GTEx Tissue Sample Gene Expression Profiles	1.0	0.902231
niacin_mus musculus_gpl1261_gds2605	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BL8868 (PRKCD)	NURSA Protein Complexes	1.0	null
Gastrointestinal system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.947
Autoimmune disease of cardiovascular system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.932
PMC3296722-pone.0032481.s009.xlsx-Sheet_1_MSC_vs_references-Gene_Symbol_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
ranged	GeneRIF Biological Term Annotations	1.0	null
serine	GeneRIF Biological Term Annotations	1.0	null
stereocilium bundle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.458803
BL7535 (NOTCH1)	NURSA Protein Complexes	1.0	null
Renal proximal tubule epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.859
PMC7858668__F2	PFOCR Pathway Figure Associations 2024	1.0	null
adrenalgland	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.01418
BL7647 (MAP3K7)	NURSA Protein Complexes	1.0	null
XRCC5_02_114	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60403
cc1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.024
genedosage	GeneRIF Biological Term Annotations	1.0	null
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8188
GSE102870_3_v_9_nr1h4_human	RummaGEO Gene Perturbation Signatures	1.0	null
faruv	GeneRIF Biological Term Annotations	1.0	null
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.62761
intensity	GeneRIF Biological Term Annotations	1.0	null
Nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.85
congenital	GeneRIF Biological Term Annotations	1.0	null
LCLC-103H	COSMIC Cell Line Gene Mutation Profiles	1.0	null
t68-liver_male_4w	MoTrPAC Rat Endurance Exercise Training	1.0	1.78856
IgE immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.681
GTEX-Q734-2226-SM-3GAD9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.869589
hcv	GeneRIF Biological Term Annotations	1.0	null
Lipid metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.572
B-lymphocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.109
different	GeneRIF Biological Term Annotations	1.0	null
BL4285 (HGS)	NURSA Protein Complexes	1.0	null
Poisoning	CTD Gene-Disease Associations	1.0	1.3716
GTEX-NPJ8-1726-SM-2YUNB	GTEx Tissue Sample Gene Expression Profiles	1.0	0.909139
SARS-CoV_96Hour_23935999_GSE47961	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.68377
Cell Transformation, Neoplastic	CTD Gene-Disease Associations	1.0	1.39591
diabetes	GeneRIF Biological Term Annotations	1.0	null
Acute Central Serous Chorioretinopathy	DisGeNET Gene-Disease Associations	1.0	null
PMC4143352__F7	PFOCR Pathway Figure Associations 2023	1.0	null
PMC5644625__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Acute kidney failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
partial	GeneRIF Biological Term Annotations	1.0	null
J82	CCLE Cell Line Gene CNV Profiles	1.0	1.78787
BL1754 (MED23)	NURSA Protein Complexes	1.0	null
BL235 (CHEK1)	NURSA Protein Complexes	1.0	null
mortality	GeneRIF Biological Term Annotations	1.0	null
CL-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861063
Hypertension	CTD Gene-Disease Associations	1.0	1.63966
GSE238018_1_v_0_mxra8_human	RummaGEO Gene Perturbation Signatures	1.0	null
PMC4237952__F4	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7956994__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC4672393__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Perturb_2858_Mut_BRAF_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
Hemoglobin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.166
tight	GeneRIF Biological Term Annotations	1.0	null
mediate	GeneRIF Biological Term Annotations	1.0	null
PMC10510228-13287_2023_3481_MOESM7_ESM.xlsx-DEGs-Differentially_expressed_genes_DEGs_in_bone_marrow-derived_MSCs_from_six_human_donors_cultured_at_high_confluency_MSC-HC_versus_low_confluency_MSC-LC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
TAL1-26923725-CHIP-SEQ-HEMANGIOBLAST-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Influenza	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.805
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40449
Brain	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.383
BL5338 (PPP1R14B)	NURSA Protein Complexes	1.0	null
brain	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NR2C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7288
Opportunistic mycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.368
BL4386 (MAGED2)	NURSA Protein Complexes	1.0	null
PMC4974115__F1	PFOCR Pathway Figure Associations 2023	1.0	null
SW 480	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826486
GTEX-S4Q7-0226-SM-4AD5O	GTEx Tissue Sample Gene Expression Profiles	1.0	1.71199
Anuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.129
Periplasmic flagellum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.885
musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.479807
Autoimmune disease of exocrine system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.571
Neutropenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.095
transplantationassociated	GeneRIF Biological Term Annotations	1.0	null
GTEX-WHPG-0004-SM-3NMDO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.933277
PPARG-20176806-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
P3X63Ag8 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.053
BL435 (NCOA1)	NURSA Protein Complexes	1.0	null
central nervous system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
excretory gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Kidney failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.022
PMC3091762__F9	PFOCR Pathway Figure Associations 2023	1.0	null
NCI-H1793	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.31655
G84452RH	GlyGen Glycosylated Proteins	1.0	null
BL2267 (TDP1)	NURSA Protein Complexes	1.0	null
GTEX-R55E-0526-SM-2TC6B	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2091
Midgut	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.405
Head	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.433
Labial gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.74
determined	GeneRIF Biological Term Annotations	1.0	null
GTEX-NL3H-0008-SM-4E3HU	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.20016
Female reproductive system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.945
Toxic shock syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.266
ZNF416	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.9942
bounding membrane of organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.067537
Corona	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.393
Moh	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.413
BL2738 (ZNF335)	NURSA Protein Complexes	1.0	null
PMC3024260__F1	PFOCR Pathway Figure Associations 2023	1.0	null
GSE81796_0_v_2_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
Multiple myeloma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.25
BL4588 (CHAF1B)	NURSA Protein Complexes	1.0	null
Plasma lipoprotein particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.775
Corolla	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.43
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.464
PMC9120629__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7354282__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Heart Failure	CTD Gene-Disease Associations	1.0	1.09822
BL8578 (MAP3K7IP1)	NURSA Protein Complexes	1.0	null
proliferative vitreoretinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.380368
PMC4038542__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Dyslipidemias	CTD Gene-Disease Associations	1.0	1.23233
amygdaloid complex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04569
Ependymocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.291
complement deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.543542
BL1827 (RCN1)	NURSA Protein Complexes	1.0	null
Chickenpox	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.412
HCC12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64461
Integrin alphaX-beta2 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.164
GTEX-WHPG-0226-SM-3NMB9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.11946
BL2257 (PRKRIR)	NURSA Protein Complexes	1.0	null
BL5589 (MYBL2)	NURSA Protein Complexes	1.0	null
Latex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.37
fh7	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.699
a-FTO (78) (FTO)	NURSA Protein Complexes	1.0	null
Heart valve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.284
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.297
deficiency	GeneRIF Biological Term Annotations	1.0	null
Myeloid neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.295
GTEX-P78B-1926-SM-3P616	GTEx Tissue Sample Gene Expression Profiles	1.0	0.936474
Cardiovascular Diseases	HuGE Navigator Gene-Phenotype Associations	1.0	null
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157F_vs_MSX1-Gene_name_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
esophagus_5a	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.18886
Degeneration of macula and posterior pole	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
BL1112 (CENPH)	NURSA Protein Complexes	1.0	null
SNU1033	CCLE Cell Line Gene CNV Profiles	-1.0	-2.48775
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46527
PMC7997388__F1	PFOCR Pathway Figure Associations 2023	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.42019
BL4540 (SMARCAL1)	NURSA Protein Complexes	1.0	null
PMC2856528__F1	PFOCR Pathway Figure Associations 2024	1.0	null
H3K4me3_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Corpus amylaceum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.502
stronger	GeneRIF Biological Term Annotations	1.0	null
Extracellular space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.806
BL1740 (CDK7)	NURSA Protein Complexes	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.41245
BL1873 (NCOA6)	NURSA Protein Complexes	1.0	null
BL1915 (SLK)	NURSA Protein Complexes	1.0	null
BL373 (TOPBP1)	NURSA Protein Complexes	1.0	null
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PMC7969890__F1	PFOCR Pathway Figure Associations 2023	1.0	null
intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.939
Coronary artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.8
Inflammation	CTD Gene-Disease Associations	1.0	2.14692
GTEX-XOTO-0826-SM-4B65O	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2652
Acute Myocardial Infarction	DisGeNET Gene-Disease Associations	1.0	null
Tentacle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.029
connection	GeneRIF Biological Term Annotations	1.0	null
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.54168
Opportunistic Infections	HuGE Navigator Gene-Phenotype Associations	1.0	null
BL2195 (USP4)	NURSA Protein Complexes	1.0	null
Fibrinogen complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.087
GTEX-WFON-0005-SM-3NMC9	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.880052
BL2157 (USP34)	NURSA Protein Complexes	1.0	null
PMC6821383__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Vitreous humor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.279
15762987-SuppTable4	GeneSigDB Published Gene Signatures	1.0	null
BL8516 (CKAP2L)	NURSA Protein Complexes	1.0	null
PMC11118997-12931_2024_2848_MOESM1_ESM.xlsx-Table_S6-Table_S6_The_result_of_MR_analysis_and_sensitivity_analysis_for_DLco_decline_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
amygdaloid complex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.66988
coagulation	GeneRIF Biological Term Annotations	1.0	null
PMC4224073__F1	PFOCR Pathway Figure Associations 2024	1.0	null
ITM2B-related cerebral amyloid angiopathy 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.086
BL2263 (DOCK9)	NURSA Protein Complexes	1.0	null
BL1569 (TRIM21)	NURSA Protein Complexes	1.0	null
GTEX-P4PQ-0005-SM-2HMKJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.870414
DDX17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05515
Blood platelet disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.059
rejection	GeneRIF Biological Term Annotations	1.0	null
Uveitis, Anterior	HuGE Navigator Gene-Phenotype Associations	1.0	null
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.932478
GTEX-XXEK-0005-SM-4BRWJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04374
PMC5388758__F5	PFOCR Pathway Figure Associations 2024	1.0	null
496100503_HIP_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.17197
Ileocecum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.255
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
BL1053 (N4BP2)	NURSA Protein Complexes	1.0	null
GTEX-OOBK-0726-SM-3LK5Q	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0051
membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.050109
Recurrent Acute Otitis Media	DisGeNET Gene-Disease Associations	1.0	null
15869706-TableS2	GeneSigDB Published Gene Signatures	1.0	null
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.854791
Plasmacytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.527
TBX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4782
irinotecan_rattus norvegicus_gpl1355_stomach_gds3466	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
appropriate	GeneRIF Biological Term Annotations	1.0	null
Cystic fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
GSE202434,GSE202438_9_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Sleep disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.087
allograft	GeneRIF Biological Term Annotations	1.0	null
skin_5f	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.54636
SC-939 (BAG1)	NURSA Protein Complexes	1.0	null
BL2760 (MED17)	NURSA Protein Complexes	1.0	null
NCI-H2803	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.3738
Tunica intima vasorum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.264
even	GeneRIF Biological Term Annotations	1.0	null
cytoplasmic vesicle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.193719
Hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.613
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045804
19204204-SupplementaryTable6	GeneSigDB Published Gene Signatures	1.0	null
Autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.128
BL5668 (KANK2)	NURSA Protein Complexes	1.0	null
16491124-SuppTable1	GeneSigDB Published Gene Signatures	1.0	null
involvement	GeneRIF Biological Term Annotations	1.0	null
Dermatitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.963
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.221
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.40938
PMC4407539__F8	PFOCR Pathway Figure Associations 2024	1.0	null
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.046152
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.057
H3K4me1_G1E_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-N7MT-0126-SM-2D7VT	GTEx Tissue Sample Gene Expression Profiles	1.0	0.861686
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.876
Cellulitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.071
PMC2955136__F4	PFOCR Pathway Figure Associations 2024	1.0	null
GSE213588_10_v_0_trametinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
OVKATE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69458
Pancreatitis	CTD Gene-Disease Associations	1.0	1.05573
nephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.111448
PMC5243832__F1	PFOCR Pathway Figure Associations 2023	1.0	null
BL7566 (HERC2)	NURSA Protein Complexes	1.0	null
GSE191021_1_v_0_nono_human	RummaGEO Gene Perturbation Signatures	1.0	null
CEBPB	ChEA Transcription Factor Targets	1.0	null
order	GeneRIF Biological Term Annotations	1.0	null
Autism spectrum disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.864
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31925
Dengue shock syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.254
BL1574 (CDC2L6)	NURSA Protein Complexes	1.0	null
BL6534 (TRAF3IP1)	NURSA Protein Complexes	1.0	null
GTEX-S7SF-0226-SM-3K2BI	GTEx Tissue Sample Gene Expression Profiles	1.0	0.963873
GTEX-RM2N-0126-SM-48FDD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.35619
GTEX-XV7Q-2226-SM-4BRVY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.894861
Thrombosis	DisGeNET Gene-Phenotype Associations	1.0	null
chr6_31973120_A_G_b38	GTEx eQTL 2025	1.0	2.91838
FLI1-21867929-CD8-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.02349
Leukodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.013
GTEX-VJWN-0426-SM-3GIJI	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.922933
CBC612 (RNF20)	NURSA Protein Complexes	1.0	null
response to molecule of bacterial origin	GO Biological Process Annotations 2025	1.0	null
Aseptic meningitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.183
Complement and coagulation cascades	KEGG Pathways 2026	1.0	null
Behcet Syndrome	HuGE Navigator Gene-Phenotype Associations	1.0	null
Endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.223
Inner acrosomal membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.295
Formate dehydrogenase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.88
GTEX-WZTO-0006-SM-3NM9T	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.84772
Type 2 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.586
dexamethasone_rattus norvegicus_gpl85_gse6216	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
C2	Pathway Commons Protein-Protein Interactions	1.0	null
Midgut epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.628
molecular	GeneRIF Biological Term Annotations	1.0	null
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.063
natural antibodies	GAD Gene-Disease Associations	1.0	null
HCC4006	CCLE Cell Line Gene CNV Profiles	-1.0	-2.32088
Leptospirosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.954
GTEX-PLZ5-0006-SM-2S1NZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.869008
PDCD11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36035
SUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
severe	GeneRIF Biological Term Annotations	1.0	null
panuveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.754527
21-Hydroxylase Deficiency	DisGeNET Gene-Disease Associations	1.0	null
PMC7411130__F3	PFOCR Pathway Figure Associations 2023	1.0	null
PMC7858668__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Castleman disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.232
Osteoarthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.271
extracellular vesicular exosome	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
margination	GeneRIF Biological Term Annotations	1.0	null
BL2687 (ZBTB7A)	NURSA Protein Complexes	1.0	null
thorax	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GTEX-S341-1826-SM-3K2AB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.17293
GTEX-QEL4-0626-SM-3GIJM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.58611
BL3199 (SIRT2)	NURSA Protein Complexes	1.0	null
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04358
GSE117212,GSE117214_0_v_1_zbtb1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-XV7Q-1726-SM-4BRUU	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04435
fh57	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.544
central nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
liver cirrhosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.256299
enhanced	GeneRIF Biological Term Annotations	1.0	null
BL8231 (TOP3A)	NURSA Protein Complexes	1.0	null
adrenal gland	HPA Tissue Gene Expression Profiles	1.0	1.15834
Liver cirrhosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.354
liver	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Perturb_7654_OE_CTCF_SRP128556	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	8.7466
anterior uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.801564
autism	GeneRIF Biological Term Annotations	1.0	null
urinary system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
SC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.33849
17850661-TableS4	GeneSigDB Published Gene Signatures	1.0	null
Systemic lupus erythematosus	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
GTEX-TKQ1-0126-SM-33HB3	GTEx Tissue Sample Gene Expression Profiles	1.0	1.18961
Promastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.033
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.10468
rt1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.784
amygdaloid complex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.3243
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.537
Immunoglobulin alpha deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.519
GSE164505,GSE164506_3_v_2_indisulam_human	RummaGEO Drug Perturbation Signatures	1.0	null
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.541
liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.123335
Nasu-Hakola disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.312
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
erythematosus	GeneRIF Biological Term Annotations	1.0	null
GTEX-XPVG-0006-SM-4B65Z	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2573
Coelomocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.519
Lung Diseases	CTD Gene-Disease Associations	1.0	1.10838
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.881
Vaginal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.598
characterized	GeneRIF Biological Term Annotations	1.0	null
ntm	GeneRIF Biological Term Annotations	1.0	null
Heart Diseases	CTD Gene-Disease Associations	1.0	1.89248
Leukocyte	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
cecum	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Podocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.655
BL2846 (MED27)	NURSA Protein Complexes	1.0	null
GSE214931_4_v_5_temozolomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BL8654 (BCCIP)	NURSA Protein Complexes	1.0	null
GTEX-OIZH-0005-SM-2HMJN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.28508
PPARG-20176806-THIOMACROPHAGE-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
icelandic	GeneRIF Biological Term Annotations	1.0	null
CBC183 (BICD2)	NURSA Protein Complexes	1.0	null
19010862-TableS1	GeneSigDB Published Gene Signatures	1.0	null
pioglitazone_rattus norvegicus_gpl1355_17 months_gds4019	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.98721
PMC3470785-NIHMS377161-supplement-3.pdf-521-ZSCAN2_ZSCAN2	Rummagene Transcription Factor Associations 2026	1.0	null
felty's syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.09041
GTEX-Q734-0726-SM-48TZP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.05929
BL1681 (BUB1)	NURSA Protein Complexes	1.0	null
Thrombotic thrombocytopenic purpura	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.853
PMC3632731__F1	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-U3ZG-0006-SM-47JWX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.933852
PPARD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.9782
Nitrate reductase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.575
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.332
thb5	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.576
ZNF280B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.68408
relationship	GeneRIF Biological Term Annotations	1.0	null
heart	GeneRIF Biological Term Annotations	1.0	null
t62-spleen_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	3.37354
CBC562 (BAT3)	NURSA Protein Complexes	1.0	null
16269622-Table1	GeneSigDB Published Gene Signatures	1.0	null
MBL2	Pathway Commons Protein-Protein Interactions	1.0	null
Autoimmune disease of musculoskeletal system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.574
Anterior midgut	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.577
BL821 (NOC3L)	NURSA Protein Complexes	1.0	null
19795415-Table1	GeneSigDB Published Gene Signatures	1.0	null
JQ006 (MSH2)	NURSA Protein Complexes	1.0	null
BL351 (HELLS)	NURSA Protein Complexes	1.0	null
mediodorsal nucleus of thalamus_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.993547
jeopardized	GeneRIF Biological Term Annotations	1.0	null
pervasive developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.715215
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08394
G31544HA	GlyGen Glycosylated Proteins	1.0	null
RBM17_02_100	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.5931
Systemic scleroderma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.238
PMC11923864-ADVS-12-2413713-s002.xlsx-Fe3O4_SiO2_NP_of_LTF_spike-in-Unnamed_0_LTF	Rummagene Transcription Factor Associations 2026	1.0	null
Tail	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.586
GTEX-OOBK-2626-SM-2HMKY	GTEx Tissue Sample Gene Expression Profiles	1.0	1.12475
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.930179
Acinar cell_Pancreatic islet_Human	CellMarker Gene-Cell Type Associations	1.0	null
GTEX-QLQW-1326-SM-2S1QS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.56196
GTEX-REY6-0826-SM-2TF4S	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.01842
Liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.24
Dengue 2 interactions with complement and coagulation cascades	WikiPathways Pathways 2024	1.0	null
NCIH1092	CCLE Cell Line Gene CNV Profiles	-1.0	-1.64253
bonemarrow_5a	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.862676
rheumatoid	GeneRIF Biological Term Annotations	1.0	null
rosiglitazone_mus musculus_gpl1261_diabetes_gds4036	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-PWOO-0926-SM-2I3EC	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00797
a-HCV10 ()	NURSA Protein Complexes	1.0	null
CBC332 (ARAF)	NURSA Protein Complexes	1.0	null
Paw	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.851
cell-cell adherens junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.843778
a-BRCC36 (BRCC3)	NURSA Protein Complexes	1.0	null
inhibited	GeneRIF Biological Term Annotations	1.0	null
end	GeneRIF Biological Term Annotations	1.0	null
Echolalia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.037
copy	GeneRIF Biological Term Annotations	1.0	null
G08146BT	GlyGen Glycosylated Proteins	1.0	null
Vasculitis	CTD Gene-Disease Associations	1.0	1.09471
ranolazine_mus musculus_gpl1261_gse25767	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-OXRN-0126-SM-48TDM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.0194
EW-7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE216273,GSE216292_14_v_8_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE81796_0_v_1_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC3163125__F1	PFOCR Pathway Figure Associations 2023	1.0	null
improved	GeneRIF Biological Term Annotations	1.0	null
Colorectum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.883
HUG1N	CCLE Cell Line Gene CNV Profiles	1.0	2.14554
H2804	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lupus Vulgaris	DisGeNET Gene-Disease Associations	1.0	null
GTEX-WVLH-0006-SM-3MJF7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.848696
PMC1769518__F1	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-WFG7-2426-SM-3GIL2	GTEx Tissue Sample Gene Expression Profiles	1.0	0.879562
Bone resorption disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
GTEX-R45C-0006-SM-3GAD6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.43375
adrenal gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02513
S100A4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30582
c4a	GeneRIF Biological Term Annotations	1.0	null
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
cSARS Bat SRBD_48Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.82641
analyzed	GeneRIF Biological Term Annotations	1.0	null
PMC4237952__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Integral component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.741
EGR1-23403033-LIVER-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
PMC3623009__F1	PFOCR Pathway Figure Associations 2023	1.0	null
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.91625
BL2604 (PPARGC1B)	NURSA Protein Complexes	1.0	null
NMS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.69
Autoimmune disease of blood	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.871
BBC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44711
PMC5260963__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Coronary artery smooth muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.763
systemic lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.471846
BL4805 (UBE4B)	NURSA Protein Complexes	1.0	null
PMC7998562__F1	PFOCR Pathway Figure Associations 2023	1.0	null
CBC41 (NAT10)	NURSA Protein Complexes	1.0	null
G-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BL5433 (ERCC6)	NURSA Protein Complexes	1.0	null
lung	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.843992
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044501
GTEX-R3RS-0008-SM-48FF1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04889
PMC6759579__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Mononuclear phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.259
PMC4431731-pgen.1005211.s002.xlsx-ERG_TRISOMY-Unnamed_2_ERG	Rummagene Transcription Factor Associations 2026	1.0	null
c4d	GeneRIF Biological Term Annotations	1.0	null
compared	GeneRIF Biological Term Annotations	1.0	null
PMC9287735-mmc8.xlsx-MI_Related_Genes-TNF_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
SC-7898 (CHEK1)	NURSA Protein Complexes	1.0	null
GSE190555,GSE190557_2_v_0_chd4_human	RummaGEO Gene Perturbation Signatures	1.0	null
Neurotoxicity Syndromes	CTD Gene-Disease Associations	1.0	1.40092
GTEX-PWO3-0011-R6A-SM-2I5F3	GTEx Tissue Sample Gene Expression Profiles	1.0	0.923783
GTEX-SIU8-0526-SM-2XCDP	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.889168
GTEX-TMZS-0001-SM-3P61Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.958465
PMC7660801__F5	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-X4EP-0005-SM-3P5ZE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.50216
Arthritis	DisGeNET Gene-Disease Associations	1.0	null
GTEX-XYKS-0926-SM-4BRVG	GTEx Tissue Sample Gene Expression Profiles	1.0	2.28481
Cytoskeleton of presynaptic active zone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.318
GTEX-UPJH-0001-SM-3NMDE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.858609
IC-05-AW29_0.1uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	-1.0	-0.238208
dorsolateral prefrontal cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11255
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.70512
differentiate	GeneRIF Biological Term Annotations	1.0	null
Sinusitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.214
Blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.703
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23177
SU-DHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90222
Inflammation	HuGE Navigator Gene-Phenotype Associations	1.0	null
BL2291 (BTBD12)	NURSA Protein Complexes	1.0	null
receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.073418
GTEX-X62O-0005-SM-46MV1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.77487
Histiocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.312
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.703
Adrenal Hyperplasia, Congenital	HuGE Navigator Gene-Phenotype Associations	1.0	null
Spondylitis, Ankylosing	HuGE Navigator Gene-Phenotype Associations	1.0	null
Smallpox	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.862
variation	GeneRIF Biological Term Annotations	1.0	null
BL2145 (TIFA)	NURSA Protein Complexes	1.0	null
Bone marrow cell	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
fixation	GeneRIF Biological Term Annotations	1.0	null
Lupus Erythematosus	DisGeNET Gene-Disease Associations	1.0	null
discussed	GeneRIF Biological Term Annotations	1.0	null
ml3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.771
GTEX-QEG4-0626-SM-2S1OY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-3.1713
BL2800 (CCNA1)	NURSA Protein Complexes	1.0	null
bone marrow	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hsa-miR-874	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
High grade glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.029
GTEX-SIU8-0006-SM-2XCE5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.98151
BL999 (FANCI)	NURSA Protein Complexes	1.0	null
BL7002 (ZMYM4)	NURSA Protein Complexes	1.0	null
GTEX-XUJ4-0005-SM-4BOQ6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.845765
Borrelia miyamotoi disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.292
G54612UD	GlyGen Glycosylated Proteins	1.0	null
Perturb_2847_Mut_AKT_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	11.9442
Extracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.695
Secretory granule membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.067
GTEX-OOBJ-0826-SM-3NB2K	GTEx Tissue Sample Gene Expression Profiles	1.0	2.0299
GTEX-QEL4-1226-SM-447A4	GTEx Tissue Sample Gene Expression Profiles	1.0	1.52192
skeletalmuscle_c	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.973661
Cerebral gray matter	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.48
NVT complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.784
BL6324 (ABL1)	NURSA Protein Complexes	1.0	null
PMC12478325-12672_2025_3468_MOESM1_ESM.xlsx-Table_S9-Table_S9_Results_of_MR_analysis_between_druggable_genes_eQTLs_and_CrNEN_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
COLO 792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12211
kidney	GeneRIF Biological Term Annotations	1.0	null
BL1691 (MAD1L1)	NURSA Protein Complexes	1.0	null
associations	GeneRIF Biological Term Annotations	1.0	null
IgD B cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.734
SPI1-20176806-THIOMACROPHAGE-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
PMC6335266__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BL1005 (WAPAL)	NURSA Protein Complexes	1.0	null
KARPAS-620	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1238
PMC6435069__F2	PFOCR Pathway Figure Associations 2023	1.0	null
MDAMB231	CCLE Cell Line Gene CNV Profiles	1.0	1.44187
BL5659 (ANKZF1)	NURSA Protein Complexes	1.0	null
BL2845 (MED27)	NURSA Protein Complexes	1.0	null
PMC8515183__F2	PFOCR Pathway Figure Associations 2024	1.0	null
G48414YA	GlyGen Glycosylated Proteins	1.0	null
Oxidative damage response	WikiPathways Pathways 2024	1.0	null
Thylakoid membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.302
Endometriosis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.945
PMC7709111__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Pore complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.08
GSE114284_2_v_0_irf1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC5306369__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Cecal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.018
precipitating	GeneRIF Biological Term Annotations	1.0	null
BL2731 (SIN3A)	NURSA Protein Complexes	1.0	null
variations	GeneRIF Biological Term Annotations	1.0	null
biomarker	GeneRIF Biological Term Annotations	1.0	null
GSE224004,GSE224005_0_v_8_chd4_human	RummaGEO Gene Perturbation Signatures	1.0	null
orbital frontal cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.10708
Neutrophil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.4
striatum_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.965847
typings	GeneRIF Biological Term Annotations	1.0	null
kidney	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
proteases	GeneRIF Biological Term Annotations	1.0	null
BL4457 (AATF)	NURSA Protein Complexes	1.0	null
BL2271 (TCF12)	NURSA Protein Complexes	1.0	null
BL2801 (CCNA1)	NURSA Protein Complexes	1.0	null
GTEX-RVPU-2226-SM-2XCAQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.55509
BL843 (PRKD2)	NURSA Protein Complexes	1.0	null
Immune System	Reactome Pathways 2024	1.0	null
Digestive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.616
mediodorsal nucleus of thalamus_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04898
hippocampus (hippocampal formation)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.872641
GTEX-XUZC-2126-SM-4BRW8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1927
PMC3085710__F4	PFOCR Pathway Figure Associations 2024	1.0	null
copynumber	GeneRIF Biological Term Annotations	1.0	null
fh18	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.336
Complement system in neuronal development and plasticity	WikiPathways Pathways 2024	1.0	null
15897907-SuppTable5	GeneSigDB Published Gene Signatures	1.0	null
Bacterial meningitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.641
GTEX-QMRM-0726-SM-2I5G8	GTEx Tissue Sample Gene Expression Profiles	1.0	1.46841
chronic	GeneRIF Biological Term Annotations	1.0	null
CR1	Pathway Commons Protein-Protein Interactions	1.0	null
Intestinal wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.829
GTEX-O5YU-0008-SM-4E3I7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.59644
BL2448 (SMARCA4)	NURSA Protein Complexes	1.0	null
vitamin e_mus musculus_gpl1261_gse42813	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lymphatic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.762
BL7546 (FOXP3)	NURSA Protein Complexes	1.0	null
PMC7709111__F5	PFOCR Pathway Figure Associations 2023	1.0	null
adrenal_4a	HPA Tissue Sample Gene Expression Profiles	1.0	0.965221
SPI1-20176806-THIOMACROPHAGE-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7427
Gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.117
GTEX-XPVG-2526-SM-4B66D	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.977726
BL6339 (ANKRD17)	NURSA Protein Complexes	1.0	null
compleme	GeneRIF Biological Term Annotations	1.0	null
GTEX-OXRK-0226-SM-3NB2G	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.971856
GTEX-S4Q7-0326-SM-3K2B1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.3199
MASP1	Pathway Commons Protein-Protein Interactions	1.0	null
BL4146 (USP36)	NURSA Protein Complexes	1.0	null
gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Phlebitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.006
Glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.443
Acrodermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.039
Kupffer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.596
parietal neocortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.937907
BL1731 (SPEN)	NURSA Protein Complexes	1.0	null
CBC193 (ERCC6L)	NURSA Protein Complexes	1.0	null
Disease of anatomical entity	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
A-CA-04-2009(H1N1)_0Hour_23935999_GSE47961	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.91741
HT55	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3724
Chronic obstructive pulmonary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.348
Gametocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.748
CP66-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
496100584_HIP_probable Alzheimer's disease_no TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.34066
SC-954 (CDC2)	NURSA Protein Complexes	1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-D_ATF4-def_vs_HCT116_Tg2-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
deposition	GeneRIF Biological Term Annotations	1.0	null
homozygous	GeneRIF Biological Term Annotations	1.0	null
GTEX-SJXC-0005-SM-2XCE7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.16045
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.571619
Multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.021
plasma lipoprotein particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.084188
probably	GeneRIF Biological Term Annotations	1.0	null
3MC syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.422
GSE135030_11_v_7_fludarabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
cellmediated	GeneRIF Biological Term Annotations	1.0	null
BL2156 (USP34)	NURSA Protein Complexes	1.0	null
amygdaloid complex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.974658
t68-liver_male_8w	MoTrPAC Rat Endurance Exercise Training	1.0	1.75248
BL1096 (DYRK2)	NURSA Protein Complexes	1.0	null
IGKC	Pathway Commons Protein-Protein Interactions	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054504
Saliva	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.317
GTEX-POYW-0008-SM-48TE4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.39201
GTEX-Q2AH-0005-SM-33HBR	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.905647
central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.259124
elevation	GeneRIF Biological Term Annotations	1.0	null
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.697
BL4284 (HGS)	NURSA Protein Complexes	1.0	null
BL809 (PRKAA1)	NURSA Protein Complexes	1.0	null
GSE253089_0_v_1_ephb2_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-T2IS-0008-SM-4DM75	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.96864
Th1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.044
G46503DX	GlyGen Glycosylated Proteins	1.0	null
moderately	GeneRIF Biological Term Annotations	1.0	null
Physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.654
Ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.977
20937356-TableS1	GeneSigDB Published Gene Signatures	1.0	null
c4i	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.293
BL2125 (HDAC3)	NURSA Protein Complexes	1.0	null
BL8107 (AHDC1)	NURSA Protein Complexes	1.0	null
16479007-Table3	GeneSigDB Published Gene Signatures	1.0	null
PMC11426526-ppat.1012555.s011.xlsx-DEG_MDDC_Jurkat_LPS_vs_MDDC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
PMC12396377-jcb_202307079_tables1.xlsx-Fig_1C_i_-_iii_right-x_TFEB_KOcon_VS_WTcon_UP_TFEB	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.92546
using	GeneRIF Biological Term Annotations	1.0	null
karpas707	HPA Cell Line Gene Expression Profiles	1.0	2.71482
IGHG3	Pathway Commons Protein-Protein Interactions	1.0	null
BL1547 (DYRK2)	NURSA Protein Complexes	1.0	null
Synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.125
BL3632 (KDM2A)	NURSA Protein Complexes	1.0	null
BL4935 (TRIM47)	NURSA Protein Complexes	1.0	null
GTEX-XBEC-1526-SM-4AT68	GTEx Tissue Sample Gene Expression Profiles	1.0	1.34886
rosiglitazone_mus musculus_gpl1261_gse11343	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
all	GeneRIF Biological Term Annotations	1.0	null
Retrotransposon nucleocapsid	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.92
GTEX-S95S-0005-SM-2XCEC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.895286
GTEX-NFK9-0006-SM-3GACS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.46394
BL1460 (MAD2L1)	NURSA Protein Complexes	1.0	null
PMC9350720__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.236
Sarcoidosis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.955
Heart disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.833
Rosette	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.617
PMC5105166-ncomms13331-s5.xlsx-Sheet1-Supplementary_Data_4_Gene_expression_signature_of_MEF2D-rearranged_cases_stranded_data_only_MEF2D	Rummagene Transcription Factor Associations 2026	1.0	null
GSE212848_1_v_0_pum1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
POLR2AphosphoS5_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Severe pre-eclampsia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.391
BL1145 (LMO1)	NURSA Protein Complexes	1.0	null
Infertility, Male	CTD Gene-Disease Associations	1.0	1.56141
BL7656 (C2orf3)	NURSA Protein Complexes	1.0	null
Gonorrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.328
dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.292257
KM-12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.905335
GSE167956_4_v_0_trim28_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Lymph node disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.331
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-A_ATF4-def_vs_HCT116_ctrl-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
health	GeneRIF Biological Term Annotations	1.0	null
AN3 CA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00932
Urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.083
Temporal lobe	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.015
Purpura	DisGeNET Gene-Disease Associations	1.0	null
Innate Immune System	Reactome Pathways 2014	1.0	null
Edema	HuGE Navigator Gene-Phenotype Associations	1.0	null
nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.089563
sw13	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.66
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.08377
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.859947
products	GeneRIF Biological Term Annotations	1.0	null
11823860-SuppTable3	GeneSigDB Published Gene Signatures	1.0	null
Inflammation	DisGeNET Gene-Phenotype Associations	1.0	null
GSE238018_3_v_5_mxra8_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.186
hippocampus (hippocampal formation)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27092
BL6599 (FBXW7)	NURSA Protein Complexes	1.0	null
PMC5783486__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Adenoma, Liver Cell	CTD Gene-Disease Associations	1.0	1.45036
GSE158182_4_v_0_pnpla3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE226249_0_v_6_pirfenidone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
other organism cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
PMC7709131__F1	PFOCR Pathway Figure Associations 2024	1.0	null
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Cestode	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.571
assembly	GeneRIF Biological Term Annotations	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.07305
SNU869	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
Steatotic liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.227
Diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.3
INSM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.3333
active	GeneRIF Biological Term Annotations	1.0	null
PMC7019324__F7	PFOCR Pathway Figure Associations 2023	1.0	null
Epimastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.345
Acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.682
Myelin membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.57
endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061341
alleles	GeneRIF Biological Term Annotations	1.0	null
GSE226584,GSE226589_1_v_0_ezh2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Kidney	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.833
marker	GeneRIF Biological Term Annotations	1.0	null
BL3004 (DDX10)	NURSA Protein Complexes	1.0	null
PMC7445411-CPR-53-e12862-s006.xlsx-Sheet1-Supplementary_Table_S4_Gene_expression_profiling_of_NT-MSC_and_III-MSC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
SW837	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57454
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02489
a-CCND1 (Ab3) (CCND1)	NURSA Protein Complexes	1.0	null
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044743
neurological	GAD High Level Gene-Disease Associations	1.0	0.293278
ELK4-26923725-CHIP-SEQ-MESODERM-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
BL533 (CCAR1)	NURSA Protein Complexes	1.0	null
Protein C deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.729
GTEX-PSDG-0008-SM-48TE5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.02782
GTEX-T6MO-0226-SM-32QOL	GTEx Tissue Sample Gene Expression Profiles	1.0	0.918376
leukocyte	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GSE216043_10_v_9_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
SW-626 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.705
KLM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826486
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7133
Bladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
Pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.726
BL7513 (ORC1L)	NURSA Protein Complexes	1.0	null
Polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.208
BL2154 (NEK7)	NURSA Protein Complexes	1.0	null
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.21435
other organism	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
NCIH1793	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34813
hsa-miR-1206	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
jm2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.528
reaction	GeneRIF Biological Term Annotations	1.0	null
BL7394 (CDK2)	NURSA Protein Complexes	1.0	null
nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.399334
MCF 10A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.13098
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.888199
bone inflammation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.522273
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8057
PANC 04.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00602
BL2759 (MED17)	NURSA Protein Complexes	1.0	null
GSE190316,GSE190324_0_v_11_rbm4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Complement Component 2 Deficiency	DisGeNET Gene-Disease Associations	1.0	null
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_C91-PL_LPS_vs_DC_Jurkat-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Sickle cell disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
a-BARD1 (BARD1)	NURSA Protein Complexes	1.0	null
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.160053
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.6386
BL2465 (NCOA7)	NURSA Protein Complexes	1.0	null
GTEX-RVPV-0008-SM-47JYW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.64122
Arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.276
BL5104 (BRF1)	NURSA Protein Complexes	1.0	null
BL8428 (SCFD1)	NURSA Protein Complexes	1.0	null
BL3114 (PPP4R1)	NURSA Protein Complexes	1.0	null
BL1585 (EGFR)	NURSA Protein Complexes	1.0	null
increasing	GeneRIF Biological Term Annotations	1.0	null
circular	GeneRIF Biological Term Annotations	1.0	null
PMC5932138__F6a	PFOCR Pathway Figure Associations 2023	1.0	null
purpura	GeneRIF Biological Term Annotations	1.0	null
autoantibody	GeneRIF Biological Term Annotations	1.0	null
silencing	GeneRIF Biological Term Annotations	1.0	null
EGR1-23403033-LIVER-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Brain Diseases	CTD Gene-Disease Associations	1.0	1.60734
Congenital Adrenal Hyperplasia	DisGeNET Gene-Disease Associations	1.0	null
PMC5880643__F1	PFOCR Pathway Figure Associations 2024	1.0	null
ab70171 (BAT3)	NURSA Protein Complexes	1.0	null
sperm part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.136559
resulting	GeneRIF Biological Term Annotations	1.0	null
Central nervous system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02489
Acute myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.115
regardless	GeneRIF Biological Term Annotations	1.0	null
G42358LZ	GlyGen Glycosylated Proteins	1.0	null
microangiopathy	GeneRIF Biological Term Annotations	1.0	null
CHO cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.463
Oligodendroglioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.627
PMC4038542__F1	PFOCR Pathway Figure Associations 2024	1.0	null
ML1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52043
GTEX-R55D-0006-SM-3GIJS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.46391
cxcl10	GeneRIF Biological Term Annotations	1.0	null
masp2	GeneRIF Biological Term Annotations	1.0	null
GTEX-S33H-1326-SM-4AD6A	GTEx Tissue Sample Gene Expression Profiles	1.0	1.25816
Autoimmune disease of central nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.072
Protein S deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.87
BL1462 (MAD2L1)	NURSA Protein Complexes	1.0	null
mouth	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Bone marrow	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
BL2388 (CUL4A)	NURSA Protein Complexes	1.0	null
Immune system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.71
CSF1-CSF1R complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.519
structures	GeneRIF Biological Term Annotations	1.0	null
PMC2738133__F3	PFOCR Pathway Figure Associations 2024	1.0	null
BL1682 (BUB1)	NURSA Protein Complexes	1.0	null
IgE B cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.8
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054858
Hyperglycemia	CTD Gene-Disease Associations	1.0	1.17034
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
iii	GeneRIF Biological Term Annotations	1.0	null
most	GeneRIF Biological Term Annotations	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.887557
hpa	GeneRIF Biological Term Annotations	1.0	null
Felty's syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.466
liver	GeneRIF Biological Term Annotations	1.0	null
Perturb_3687_KD_RARRES2_SRP287866	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-7.79639
amygdaloid complex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.943244
Dengue hemorrhagic fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.37
BL2193 (USP4)	NURSA Protein Complexes	1.0	null
sheerlen	GeneRIF Biological Term Annotations	1.0	null
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34176
Bone structure disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.194
Relapsing fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.129
Nymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.069
convertase	GeneRIF Biological Term Annotations	1.0	null
HEPG2	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	1.73498
infarct	GeneRIF Biological Term Annotations	1.0	null
BL758 (BANP)	NURSA Protein Complexes	1.0	null
Parkinson Disease	DisGeNET Gene-Disease Associations	1.0	null
TBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2883
Collagen beaded filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.728
t60-adrenal_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	5.78426
predisposes	GeneRIF Biological Term Annotations	1.0	null
BL6647 (EPS15)	NURSA Protein Complexes	1.0	null
C3	Pathway Commons Protein-Protein Interactions	1.0	null
Brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.193
BL6507 (FBXO28)	NURSA Protein Complexes	1.0	null
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53863
Crohn Disease	DisGeNET Gene-Disease Associations	1.0	null
G00912UN	GlyGen Glycosylated Proteins	1.0	null
Graves' disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.062
IGHG4	Pathway Commons Protein-Protein Interactions	1.0	null
ige b cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.28143
BL1756 (MED23)	NURSA Protein Complexes	1.0	null
RCOR2-21632747-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
BL6498 (EVI1)	NURSA Protein Complexes	1.0	null
GTEX-RM2N-0008-SM-48FF3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.8059
Complement component C1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.717
PMC9626853__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Microglial cell_Brain_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
PMC12696503-mmc2.xlsx-ST15_KD_RNA-seq_diff_expr-symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
SC-28676 (SATB1)	NURSA Protein Complexes	1.0	null
region	GeneRIF Biological Term Annotations	1.0	null
lung	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
responsiveness	GeneRIF Biological Term Annotations	1.0	null
IST-SL1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Myeloma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.987
dg2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.547
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.122
Retinal pigment epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.592
b-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079436
PMC6177401__F5	PFOCR Pathway Figure Associations 2023	1.0	null
concentrations	GeneRIF Biological Term Annotations	1.0	null
NCI-H1944	COSMIC Cell Line Gene Mutation Profiles	1.0	null
4star	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-1.04066
ESS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Neuronal cell body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.092
regulating	GeneRIF Biological Term Annotations	1.0	null
GTEX-X5EB-2326-SM-46MW5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.37277
GTEX-QCQG-2126-SM-2S1P8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00061
MV-4-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BL2153 (NEK7)	NURSA Protein Complexes	1.0	null
Mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.347
LN-229	COSMIC Cell Line Gene Mutation Profiles	1.0	null
humoral	GeneRIF Biological Term Annotations	1.0	null
BL2393 (CDT1)	NURSA Protein Complexes	1.0	null
GTEX-P4QT-2626-SM-2I3FM	GTEx Tissue Sample Gene Expression Profiles	1.0	1.29905
plasma membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.054043
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.657234
BL8233 (TOP3A)	NURSA Protein Complexes	1.0	null
GSE223241_2_v_0_cdkn2a_human	RummaGEO Gene Perturbation Signatures	1.0	null
Urinary system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.954
PU.1-20176806-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Ghost	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.852
HEY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1166
PMC11668092-12884_2024_7077_MOESM1_ESM.xlsx-Table_S1-Table_S1_Instrumental_variables_used_in_MR_analysis_of_the_association_between_druggable_genes_and_HG_based_on_Finngen_study_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
BL3032 (ERBB2)	NURSA Protein Complexes	1.0	null
H3K4me1_liver_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
hsa-miR-2115	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
IgA glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.853
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.471
Eosinophil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.662
hallmark	GeneRIF Biological Term Annotations	1.0	null
TBX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4108
Musculoskeletal system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
Pancreatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
Bone marrow disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.317
Respiratory allergy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.007
BL8472 (MADD)	NURSA Protein Complexes	1.0	null
PMC4380746__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC10036758__F1	PFOCR Pathway Figure Associations 2024	1.0	null
H3K27ac_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Connective tissue	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.178
neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.119673
Lymphatic system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.668
skbr3	HPA Cell Line Gene Expression Profiles	-1.0	-2.39936
Oligodendroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.943
null	GeneRIF Biological Term Annotations	1.0	null
Np	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.104
WDR75	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22282
lateral ventricle	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
cerebellar cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.991019
HS 255.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
PMC6109707__F8	PFOCR Pathway Figure Associations 2024	1.0	null
Rheumatic heart disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.144
GTEX-XQ3S-1726-SM-4BOOD	GTEx Tissue Sample Gene Expression Profiles	1.0	0.982107
BL6305 (POLL)	NURSA Protein Complexes	1.0	null
Hyalocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.513
BL5423 (ERCC3)	NURSA Protein Complexes	1.0	null
G39619TI	GlyGen Glycosylated Proteins	1.0	null
H3K36me3_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
diseases	GeneRIF Biological Term Annotations	1.0	null
Female reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.117
Activation of C3 and C5	Reactome Pathways 2024	1.0	null
HCC1806	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.39842
lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047489
common	GeneRIF Biological Term Annotations	1.0	null
Cranial nerve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.513
allografts	GeneRIF Biological Term Annotations	1.0	null
UHRF2 (UHRF2)	NURSA Protein Complexes	1.0	null
BL2398 (DDB2)	NURSA Protein Complexes	1.0	null
secretory granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.074764
BL597 (APTX)	NURSA Protein Complexes	1.0	null
BL6695 (UTY)	NURSA Protein Complexes	1.0	null
electron	GeneRIF Biological Term Annotations	1.0	null
GSE210682_0_v_3_methadone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.197
psoriasis	GeneRIF Biological Term Annotations	1.0	null
Cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
a-ATR (YW) (ATR)	NURSA Protein Complexes	1.0	null
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GTEX-QDVN-0626-SM-2I3FP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.29101
GTEX-U3ZN-0002-SM-3NMDF	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.57985
a2h	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.333
reduced	GeneRIF Biological Term Annotations	1.0	null
GTEX-O5YT-0008-SM-4E3IQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.13285
Photoreceptor outer segment	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.067
Bacterial biofilm matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.199
BL1426 (FOXO1)	NURSA Protein Complexes	1.0	null
GTEX-PLZ5-2026-SM-2S1O4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.879221
multi-eIF complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.563
similar	GeneRIF Biological Term Annotations	1.0	null
Adult respiratory distress syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.483
BL7903 (C16orf53)	NURSA Protein Complexes	1.0	null
15120960-Table5	GeneSigDB Published Gene Signatures	1.0	null
GSE236003_1_v_3_ubr5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
locus	GeneRIF Biological Term Annotations	1.0	null
Blood	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CBC2142 (ESCO1)	NURSA Protein Complexes	1.0	null
BL2854 (MED18)	NURSA Protein Complexes	1.0	null
vulgaris	GeneRIF Biological Term Annotations	1.0	null
blood-brain barrier	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.511
BL1685 (BUB3)	NURSA Protein Complexes	1.0	null
distinct	GeneRIF Biological Term Annotations	1.0	null
Symbiont cell surface	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
subjects	GeneRIF Biological Term Annotations	1.0	null
undergo	GeneRIF Biological Term Annotations	1.0	null
BL844 (PRKD2)	NURSA Protein Complexes	1.0	null
EA-39-YN88_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.279927
masp1	GeneRIF Biological Term Annotations	1.0	null
BL237 (RAD17)	NURSA Protein Complexes	1.0	null
Infertility, Female	CTD Gene-Disease Associations	1.0	1.01966
iridocyclitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.785165
did	GeneRIF Biological Term Annotations	1.0	null
PMC7491318__F11	PFOCR Pathway Figure Associations 2023	1.0	null
Syncytiotrophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.029
mannosebinding	GeneRIF Biological Term Annotations	1.0	null
Penis_Foreskin_Melanocyte_Primary_Cells_skin01	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-1.05009
GSE236502_2_v_3_paclitaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-S4Z8-0126-SM-4GICC	GTEx Tissue Sample Gene Expression Profiles	1.0	2.71392
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.135
Joint	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.872
Systemic lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.53
DEPDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59472
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861063
Mumps	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.054
Secondary lysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.368
parkinson's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.287235
orbital frontal cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.43641
BL2094 (MSH2)	NURSA Protein Complexes	1.0	null
PMC6522855__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Cowpox	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.274
Hypercholesterolemia	CTD Gene-Disease Associations	1.0	1.16733
PPARG	ChEA Transcription Factor Targets	1.0	null
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14475
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16735
Perturb_14556_KO_KLF5_SRP051606	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
doxorubicin_homo sapiens_gpl570_gse11940	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Macular degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.276
BL1545 (TTK)	NURSA Protein Complexes	1.0	null
PMC5075576__F2	PFOCR Pathway Figure Associations 2023	1.0	null
NR1H4::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.4411
GTEX-Y8E5-0006-SM-47JWQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04285
Autoimmune disease of skin and connective tissue	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
Liver	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.616
one	GeneRIF Biological Term Annotations	1.0	null
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064155
GTEX-UPK5-1326-SM-4IHLE	GTEx Tissue Sample Gene Expression Profiles	1.0	0.88226
underlying	GeneRIF Biological Term Annotations	1.0	null
ileocecum	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
NR1H2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.68
Dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.685
methylprednisolone_rattus norvegicus_gpl85_gds253	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Acute Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
Plasma membrane respirasome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.571
icSARS CoV_7Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.44859
Nasopharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.233
TP53	ChEA Transcription Factor Targets	1.0	null
Degenerative Polyarthritis	DisGeNET Gene-Disease Associations	1.0	null
report	GeneRIF Biological Term Annotations	1.0	null
GTEX-XV7Q-0926-SM-4BRVQ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.892716
Complement component C1q complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.399
RBM28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13269
Ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.196
pharmacogenomic	GAD High Level Gene-Disease Associations	1.0	0.293278
BL974 (PNKP)	NURSA Protein Complexes	1.0	null
BL2842 (MED12)	NURSA Protein Complexes	1.0	null
BL1105 (CENPC1)	NURSA Protein Complexes	1.0	null
GTEX-OHPN-0005-SM-2YUML	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.11841
Blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.398
GTEX-SNOS-1626-SM-3NMA4	GTEx Tissue Sample Gene Expression Profiles	1.0	0.913941
Ulcerative colitis	GWAS Catalog SNP-Phenotype Associations 2025	1.0	6.4301
TRAMP-C2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.742
PMC4380746__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7934421__F1	PFOCR Pathway Figure Associations 2023	1.0	null
PMC6361534__F1	PFOCR Pathway Figure Associations 2024	1.0	null
BL6535 (TRAF3IP1)	NURSA Protein Complexes	1.0	null
GSE150049_2_v_0_dexamethasone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Cingulate gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.168
Interferon regulatory factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.256
monocyte-derived dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.06
NCIH1573	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35426
Pulmonary tuberculosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.07
CBC194 (ERCC6L)	NURSA Protein Complexes	1.0	null
Complement Deficiency	DisGeNET Gene-Disease Associations	1.0	null
KATOIII	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SC-797 (GADD45A)	NURSA Protein Complexes	1.0	null
BL5670 (KANK2)	NURSA Protein Complexes	1.0	null
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53863
Extracellular region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.825
Acute Anterior Uveitis	DisGeNET Gene-Disease Associations	1.0	null
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22998
GTEX-P4QT-0008-SM-48TDZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08336
GTEX-WY7C-0226-SM-3NB37	GTEx Tissue Sample Gene Expression Profiles	1.0	0.921712
Hip joint	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.555
GTEX-S32W-0126-SM-4AD61	GTEx Tissue Sample Gene Expression Profiles	1.0	1.18411
Entorhinal cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.151
Tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.207
Tail muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.728
Choroid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.524
GTEX-OIZH-1326-SM-3NB1H	GTEx Tissue Sample Gene Expression Profiles	1.0	1.97731
PMC4077819__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Paroxysmal nocturnal hemoglobinuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.329
IgD immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.104
GTEX-QLQW-0226-SM-447BJ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.77965
BHK-21 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.985
BL5777 (WTAP)	NURSA Protein Complexes	1.0	null
Venous blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.47
Venous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.887
16440291-SuppTable1	GeneSigDB Published Gene Signatures	1.0	null
Initial triggering of complement	Reactome Pathways 2024	1.0	null
profiles	GeneRIF Biological Term Annotations	1.0	null
lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.098228
PMC8593586-mmc2.xlsx-LIN28A_interactome-Unnamed_1_LIN28A	Rummagene Transcription Factor Associations 2026	1.0	null
BL4675 (DBF4)	NURSA Protein Complexes	1.0	null
gall bladder	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
GSE114284_2_v_3_irf1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Vero cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.314
H1_Cell_Line	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-1.2529
Precancerous Conditions	CTD Gene-Disease Associations	1.0	1.49967
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.21365
whole	GeneRIF Biological Term Annotations	1.0	null
GTEX-QVUS-0006-SM-3GAE8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.32603
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.322
diversity	GeneRIF Biological Term Annotations	1.0	null
RCOR2	ChEA Transcription Factor Targets	1.0	null
BL2249 (HPS5)	NURSA Protein Complexes	1.0	null
binds	GeneRIF Biological Term Annotations	1.0	null
Commensal bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.442
Lipid storage disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.869
GTEX-OHPL-2426-SM-48TDN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.1918
MYCN-19997598-NEUROBLASTOMA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Splenomegaly	CTD Gene-Disease Associations	1.0	1.052
LMO2-26923725-CHIP-SEQ-HEMANGIOBLAST-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Hepatopancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.574
mediodorsal nucleus of thalamus_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.35826
protocol	GeneRIF Biological Term Annotations	1.0	null
Nervous system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
ZNF257	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.2641
GTEX-V1D1-0926-SM-4JBHQ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.868828
GSE135439_0_v_1_pax5_human	RummaGEO Gene Perturbation Signatures	1.0	null
Blood vessel wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.219
Endothelial microparticle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.631
late	GeneRIF Biological Term Annotations	1.0	null
Membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.843
hippocampus (hippocampal formation)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.66347
Glomerular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.199
bind	GeneRIF Biological Term Annotations	1.0	null
BL2533 (OBFC1)	NURSA Protein Complexes	1.0	null
Intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.51
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.11081
Pyoderma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.413
GSE193351_1_v_0_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GTEX-OIZG-0008-SM-4E3J2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.987861
Leishmaniasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
monomeric	GeneRIF Biological Term Annotations	1.0	null
cell junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.117646
SC-67285 (PPARGC1B)	NURSA Protein Complexes	1.0	null
496100666_HIP_probable Alzheimer's disease_TBI_83_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.00446
SPDEF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1724
GTEX-X5EB-0726-SM-46MVR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14988
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.21
PMC5932138__F6a	PFOCR Pathway Figure Associations 2024	1.0	null
native	GeneRIF Biological Term Annotations	1.0	null
Complement deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.992
weeks	GeneRIF Biological Term Annotations	1.0	null
hippocampus (hippocampal formation)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.8066
ahr_19454665_epidermal_langerhans_cell_lof_mouse_gpl339_gds3575	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.536082
considered	GeneRIF Biological Term Annotations	1.0	null
Peripheral vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.136
SC-48788 (FOXG1)	NURSA Protein Complexes	1.0	null
GTEX-U412-0006-SM-3DB8J	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.11474
alitretinoin_rattus norvegicus_gpl85_lung_gds2385	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BL324 (PMS2)	NURSA Protein Complexes	1.0	null
fimac	GeneRIF Biological Term Annotations	1.0	null
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.716
Compact myelin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.774
CBC32 (POLDIP3)	NURSA Protein Complexes	1.0	null
Perturb_2856_Mut_VHL_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	8.7702
COLO 849	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.974337
PMC7660801__F5	PFOCR Pathway Figure Associations 2024	1.0	null
BL1582 (E4F1)	NURSA Protein Complexes	1.0	null
BL2787 (PSMC5)	NURSA Protein Complexes	1.0	null
SC-596 (CCNA2)	NURSA Protein Complexes	1.0	null
ventrolateral prefrontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.838238
peritubular	GeneRIF Biological Term Annotations	1.0	null
639-V	COSMIC Cell Line Gene Mutation Profiles	1.0	null
embryoday6.5	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.8273
GTEX-T8EM-1326-SM-3DB7G	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.52551
GTEX-PLZ4-0008-SM-48TE6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.0406
Arteriosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.777
c4b	GeneRIF Biological Term Annotations	1.0	null
malaysian	GeneRIF Biological Term Annotations	1.0	null
Erythrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.62
Urinary Bladder Neoplasms	CTD Gene-Disease Associations	1.0	1.35647
PMC8323949-pcbi.1009228.s007.xlsx-HNSCC_ALL_exceptLN-X17_ZNF717	Rummagene Transcription Factor Associations 2026	1.0	null
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.457
Histone locus body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.821
Thyroid gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.135
Otitis media	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.596
GTEX-QXCU-0326-SM-2TC63	GTEx Tissue Sample Gene Expression Profiles	1.0	0.900281
GTEX-VUSG-0006-SM-3GIK9	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.60292
BL5345 (PTPN12)	NURSA Protein Complexes	1.0	null
GSE225762_1_v_0_pcmt1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.111
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5065
anterior (rostral) cingulate (medial prefrontal) cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11375
act	GeneRIF Biological Term Annotations	1.0	null
CBC52 (NAT13)	NURSA Protein Complexes	1.0	null
Autism spectrum disorder	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.371
BL1296 (IRS1)	NURSA Protein Complexes	1.0	null
Bipolar disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.468
EEF1A1	Hub Proteins Protein-Protein Interactions	1.0	null
Merozoite	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.317
Tassel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.688
HCC1897	CCLE Cell Line Gene CNV Profiles	-1.0	-1.85827
liver_c	HPA Tissue Sample Gene Expression Profiles	1.0	1.71209
RPS27A	Hub Proteins Protein-Protein Interactions	1.0	null
PMC9173662__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Cervix disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
Bone inflammation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.278
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
Tertiary granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.614
ratio	GeneRIF Biological Term Annotations	1.0	null
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040114
PMC6169142__F3	PFOCR Pathway Figure Associations 2024	1.0	null
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7611
PMC9161725-Table_4.xlsx-EHF-CSAG1_EHF	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71834
HEp-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.206
chromosome	GeneRIF Biological Term Annotations	1.0	null
Tobacco Smoke Pollution	CTD Gene-Chemical Interactions	1.0	null
Glia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.353
IgG B cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.572
GTEX-OXRK-0008-SM-3NB28	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.10784
20368555-TS-1	GeneSigDB Published Gene Signatures	1.0	null
GTEX-X4XY-1626-SM-46MVN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.262
c433	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.415
Agranulocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.171
sitespecific	GeneRIF Biological Term Annotations	1.0	null
basis	GeneRIF Biological Term Annotations	1.0	null
BL9162 (CARD11)	NURSA Protein Complexes	1.0	null
Tongue epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.725
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050798
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.827
Sputum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.311
Renal artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.811
Protein Deficiency	DisGeNET Gene-Disease Associations	1.0	null
G06356OH	GlyGen Glycosylated Proteins	1.0	null
retromer, cargo-selective complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.906
Allograft rejection	WikiPathways Pathways 2024	1.0	null
PMC12120114-41525_2025_502_MOESM1_ESM.pdf-713-BPTF_BPTF	Rummagene Transcription Factor Associations 2026	1.0	null
IGHG1	Pathway Commons Protein-Protein Interactions	1.0	null
NCI-H358	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BL8230 (TOP3A)	NURSA Protein Complexes	1.0	null
GTEX-OOBK-0005-SM-2YUMG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.26838
Eye disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
low-density lipoprotein particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.72
rosiglitazone_rattus norvegicus_gpl341_liver_gds3850	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cohort	GeneRIF Biological Term Annotations	1.0	null
pediatric	GeneRIF Biological Term Annotations	1.0	null
respiratory system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
HCC-827	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BL8369 (NFYA)	NURSA Protein Complexes	1.0	null
GTEX-XBEC-0006-SM-4AT5T	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.825252
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.854791
BL5826 (ORC6L)	NURSA Protein Complexes	1.0	null
Respiratory system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.7
BPH-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.567
Intestinal disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.898
HSC3	CCLE Cell Line Gene CNV Profiles	1.0	1.41344
Cerebral hemisphere	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.383
GTEX-X4XX-0005-SM-3NMCS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.871917
GTEX-QCQG-1426-SM-48U22	GTEx Tissue Sample Gene Expression Profiles	1.0	0.994534
BL5966 (RANBP3)	NURSA Protein Complexes	1.0	null
Endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
bridge	GeneRIF Biological Term Annotations	1.0	null
Hypereosinophilic syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
HUES64_Cell_Line	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-0.963824
b-lymphocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.435672
PMC9299105__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Groin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.798
related	GeneRIF Biological Term Annotations	1.0	null
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.245
XRCC2-RAD51D complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.63
GTEX-U3ZM-0226-SM-4DXTA	GTEx Tissue Sample Gene Expression Profiles	1.0	1.26818
BL2762 (HNRNPU)	NURSA Protein Complexes	1.0	null
Trypanosomiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.418
inhibits	GeneRIF Biological Term Annotations	1.0	null
hyperreactivity	GeneRIF Biological Term Annotations	1.0	null
isotypes	GeneRIF Biological Term Annotations	1.0	null
thrombosis	GeneRIF Biological Term Annotations	1.0	null
BL2970 (ASZ1)	NURSA Protein Complexes	1.0	null
prosheerlenc4bp	GeneRIF Biological Term Annotations	1.0	null
Scleroderma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.498
Forebrain	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.383
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056744
GTEX-SJXC-1226-SM-4DM78	GTEx Tissue Sample Gene Expression Profiles	1.0	1.06045
SC-81280 (NCOA2)	NURSA Protein Complexes	1.0	null
cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.052511
Brain infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.215
GTEX-UPK5-1426-SM-4JBHH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.76294
Alzheimer Disease	DisGeNET Gene-Disease Associations	1.0	null
Nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
18223198-TableS3	GeneSigDB Published Gene Signatures	1.0	null
CBC2232 (AKAP8)	NURSA Protein Complexes	1.0	null
GSE210682_2_v_3_methadone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ML-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.839
Photosystem	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.489
failure	GeneRIF Biological Term Annotations	1.0	null
G11870QZ	GlyGen Glycosylated Proteins	1.0	null
worsened	GeneRIF Biological Term Annotations	1.0	null
GTEX-WXYG-2526-SM-3NB3F	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.30329
Lysosomal storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.414
type	GeneRIF Biological Term Annotations	1.0	null
PMC5388758__F5	PFOCR Pathway Figure Associations 2023	1.0	null
PMC5243832__F1	PFOCR Pathway Figure Associations 2024	1.0	null
indicative	GeneRIF Biological Term Annotations	1.0	null
External encapsulating structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.379
BL5054 (POLE3)	NURSA Protein Complexes	1.0	null
skeletal system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Biofilm matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.193
ventrolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01514
Choroid plexus epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.78
GTEX-X4XY-0826-SM-4E3JM	GTEx Tissue Sample Gene Expression Profiles	1.0	0.908417
GTEX-XPT6-0001-SM-4B64G	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.01955
well	GeneRIF Biological Term Annotations	1.0	null
GTEX-POYW-0006-SM-2XCF4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.871307
PMC3085710__F4	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-WHWD-0005-SM-3LK7D	GTEx Tissue Sample Gene Expression Profiles	-1.0	-3.1713
G39188ZX	GlyGen Glycosylated Proteins	1.0	null
describe	GeneRIF Biological Term Annotations	1.0	null
BL1800 (BCL11B)	NURSA Protein Complexes	1.0	null
G80920RR	GlyGen Glycosylated Proteins	1.0	null
Ulcerative colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.258
lower	GeneRIF Biological Term Annotations	1.0	null
CBC552 (TACC3)	NURSA Protein Complexes	1.0	null
BL7902 (POLK)	NURSA Protein Complexes	1.0	null
isoelectric	GeneRIF Biological Term Annotations	1.0	null
BL3007 (RMI1)	NURSA Protein Complexes	1.0	null
GSE202434,GSE202438_6_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
rpc4cyp21tnx	GeneRIF Biological Term Annotations	1.0	null
Lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.212
GTEX-WFON-1726-SM-4LVMQ	GTEx Tissue Sample Gene Expression Profiles	1.0	2.09635
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.0
Bundle sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.057
GSE138633_2_v_0_bag3_human	RummaGEO Gene Perturbation Signatures	1.0	null
BL434 (NCOA1)	NURSA Protein Complexes	1.0	null
low	GeneRIF Biological Term Annotations	1.0	null
Cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.311
Slit diaphragm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.971
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.049699
membranoproliferative glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.430017
liver	HPA Tissue Gene Expression Profiles	1.0	2.24804
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.892951
BL330 (CDC25A)	NURSA Protein Complexes	1.0	null
MBD3L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.80658
Renal corpuscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.021
PMC12559107-12035_2025_5221_MOESM1_ESM.xlsx-Supplement_Tab_4-Supplement_Tab_4_Significantly_pharmacological_target_genes_of_MR_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
Prenatal Injuries	CTD Gene-Disease Associations	1.0	1.19179
components	GeneRIF Biological Term Annotations	1.0	null
PMC6435069__F2	PFOCR Pathway Figure Associations 2024	1.0	null
lymphocyte	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Autoimmune disease of peripheral nervous system	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
Phagolysosome membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.542
Autoimmune thyroiditis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.219
Laryngeal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.199
CALU3	CCLE Cell Line Gene CNV Profiles	1.0	1.70238
Orbit	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.872
Cerebral malaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.46
Perturb_2859_Mut_BRAF_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
blood	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
other	GeneRIF Biological Term Annotations	1.0	null
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.22213
PMC10353540-Table_1.xlsx-HCC1954_AR_vs_HCC1954_A-Gene_Name_AR	Rummagene Transcription Factor Associations 2026	1.0	null
KYSE-150	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.93442
physiology	GeneRIF Biological Term Annotations	1.0	null
OGA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61438
KDM2B-26808549-CHIP-SEQ-REH-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Angina Pectoris	HuGE Navigator Gene-Phenotype Associations	1.0	null
three	GeneRIF Biological Term Annotations	1.0	null
kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.063964
BL5646 (ANKIB1)	NURSA Protein Complexes	1.0	null
atopic dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.203604
CBC361 (MALT1)	NURSA Protein Complexes	1.0	null
BL2158 (USP34)	NURSA Protein Complexes	1.0	null
BL1239 (MAML1)	NURSA Protein Complexes	1.0	null
Motor neuron disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.557
injury	GeneRIF Biological Term Annotations	1.0	null
BL1882 (DDIT4)	NURSA Protein Complexes	1.0	null
Brain myelin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.761
complemenb	GeneRIF Biological Term Annotations	1.0	null
RAMOS (RA.1) cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.182
Myasthenia Gravis	DisGeNET Gene-Disease Associations	1.0	null
Perturb_2851_Mut_NRAS_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
proliferative	GeneRIF Biological Term Annotations	1.0	null
circulating	GeneRIF Biological Term Annotations	1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
GTEX-PWOO-0326-SM-48TDB	GTEx Tissue Sample Gene Expression Profiles	1.0	1.83005
Monogenic disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
PMC11979751-table_s1_trajectoryderivation_elad055.xlsx-Cluster_DE_Genes_Summary-Cluster_3_AP1_Up_JUN	Rummagene Transcription Factor Associations 2026	1.0	null
b cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.602331
PMC6078963-41467_2018_5311_MOESM5_ESM.xlsx-48h_KD_UP_Vs_ATAC-mgi_database_human_gene_AR	Rummagene Transcription Factor Associations 2026	1.0	null
had	GeneRIF Biological Term Annotations	1.0	null
GTEX-P4PP-0008-SM-48TDV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.8403
BL7111 (SATB2)	NURSA Protein Complexes	1.0	null
surgery	GeneRIF Biological Term Annotations	1.0	null
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.26593
nonstructural	GeneRIF Biological Term Annotations	1.0	null
BL6644 (EPS15L1)	NURSA Protein Complexes	1.0	null
Annulus fibrosus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.379
PMC11615365-41467_2024_54246_MOESM6_ESM.xlsx-KK47-Numb-KD_vs_Ctr-KD-ensemblGeneId_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-RN64-0326-SM-2TC5J	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.70634
skeletalmuscle_b	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.13183
multiallelic	GeneRIF Biological Term Annotations	1.0	null
Neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.257
17952122-GeneList	GeneSigDB Published Gene Signatures	1.0	null
subarachnoid space	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ami	GeneRIF Biological Term Annotations	1.0	null
Dermatomyositis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.449
Other organism part	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
PMC5557313__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.285
apoptotic	GeneRIF Biological Term Annotations	1.0	null
Kawasaki disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.056
Esophagus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.517
Vermiform appendix	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	2.255
purified	GeneRIF Biological Term Annotations	1.0	null
GTEX-P78B-1326-SM-3P611	GTEx Tissue Sample Gene Expression Profiles	1.0	1.74496
HUPT3	CCLE Cell Line Gene CNV Profiles	1.0	2.46166
GSE216043_7_v_9_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.096901
hematopoietic	GeneRIF Biological Term Annotations	1.0	null
GTEX-QDVN-0826-SM-48TZ2	GTEx Tissue Sample Gene Expression Profiles	1.0	2.50173
Colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.4
scenario	GeneRIF Biological Term Annotations	1.0	null
Perturb_2868_Mut_HIF1A_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
setting	GeneRIF Biological Term Annotations	1.0	null
GTEX-QLQW-1426-SM-2S1QU	GTEx Tissue Sample Gene Expression Profiles	1.0	0.911314
Sjogren's syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.571
BL2603 (MED24)	NURSA Protein Complexes	1.0	null
BL2757 (CRABP2)	NURSA Protein Complexes	1.0	null
BL5549 (DEK)	NURSA Protein Complexes	1.0	null
IGROV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157K_vs_MSX1-Gene_name_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
TET3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37345
skin_5e	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.992944
Vitreous chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.274
PMC6473060__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Immune system disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
lupus erythematosus, systemic; systemic lupus erythematosus	GAD Gene-Disease Associations	1.0	null
G57321FI	GlyGen Glycosylated Proteins	1.0	null
SW 1990	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
BL860 (CSPG4)	NURSA Protein Complexes	1.0	null
GTEX-S3XE-0126-SM-4AD4R	GTEx Tissue Sample Gene Expression Profiles	1.0	1.75589
Intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.254
thrombin	GeneRIF Biological Term Annotations	1.0	null
Hepatoma HLE cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.712
PMC2966895__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Middle cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.206
high-density lipoprotein particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.159268
c32	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.502
Genetic disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Inflammatory cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.874
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.79656
H3K9me3_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
PMC7310461__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Arthritis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
Lung non-small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.133
BL5689 (ANKRD57)	NURSA Protein Complexes	1.0	null
KPL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.72945
pathogenesis	GeneRIF Biological Term Annotations	1.0	null
Embryonic structure	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.533
BL2594 (PIAS2)	NURSA Protein Complexes	1.0	null
GTEX-S4UY-0008-SM-3NM8H	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07246
Rheumatic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.563
GTEX-T6MN-1226-SM-3NMA5	GTEx Tissue Sample Gene Expression Profiles	1.0	0.837178
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
COLO792	CCLE Cell Line Gene CNV Profiles	1.0	1.34725
Fetal Death	CTD Gene-Disease Associations	1.0	1.03009
glomerulonephritis	GeneRIF Biological Term Annotations	1.0	null
GTEX-UJHI-0126-SM-4IHLP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0917
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	2.19454
BL2758 (MED17)	NURSA Protein Complexes	1.0	null
Cranial nerve disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
Perianth	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.415
Perturb_12180_KD_METTL3_ERP137121	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-4.1116
imply	GeneRIF Biological Term Annotations	1.0	null
Adipose - Visceral (Omentum)	GTEx Tissue Gene Expression Profiles 2023	1.0	4.60735
GSE102870_1_v_2_nr1h4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
juvenile rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.173057
GTEX-WWYW-0826-SM-3NB2X	GTEx Tissue Sample Gene Expression Profiles	1.0	1.25614
BL8514 (CKAP2)	NURSA Protein Complexes	1.0	null
BL7356 (WDR89)	NURSA Protein Complexes	1.0	null
Frontotemporal dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.34
Monocyte	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.633
KG-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.646
GTEX-O5YW-0006-SM-3LK6E	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2014
bloodgroup	GeneRIF Biological Term Annotations	1.0	null
staining	GeneRIF Biological Term Annotations	1.0	null
GTEX-RWS6-1026-SM-47JXD	GTEx Tissue Sample Gene Expression Profiles	1.0	0.836579
Placenta	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.367
PMC6563602__F1	PFOCR Pathway Figure Associations 2023	1.0	null
ARNT::HIF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2212
fh13	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.341
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.86294
PMC4407539__F8	PFOCR Pathway Figure Associations 2023	1.0	null
salivary gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Acute poststreptococcal glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.531
GTEX-WK11-2526-SM-3NM9Y	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.3636
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.05133
GTEX-QDVN-0426-SM-48TZ6	GTEx Tissue Sample Gene Expression Profiles	1.0	2.80096
19036130-TableS1a	GeneSigDB Published Gene Signatures	1.0	null
outer acrosomal membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.872266
GTEX-WFG7-0326-SM-3GILI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0061
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.50572
Kidney Tubular Necrosis, Acute	CTD Gene-Disease Associations	1.0	1.14098
Childhood Burkitt Lymphoma	DisGeNET Gene-Disease Associations	1.0	null
Hepatobiliary disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.947
BL6998 (ZKSCAN1)	NURSA Protein Complexes	1.0	null
pancreas	HPA Tissue Gene Expression Profiles	-1.0	-1.11649
H3K4me3_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Cerebral gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.263
BL5895 (MAP4K4)	NURSA Protein Complexes	1.0	null
RXR-22158963-LIVER-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Myositis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.523
Mycolate outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.226
Photosynthetic membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.451
BL4488 (KDM5C)	NURSA Protein Complexes	1.0	null
Pericarditis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.188
GTEX-UPIC-0002-SM-3NMDC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.984578
seen	GeneRIF Biological Term Annotations	1.0	null
GTEX-QDVN-2226-SM-2S1PM	GTEx Tissue Sample Gene Expression Profiles	1.0	0.925302
GTEX-PX3G-0126-SM-2I3EN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07673
decreased lean body mass	IMPC Knockout Mouse Phenotypes	1.0	null
Autoimmune disease of musculoskeletal system	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.202
inferolateral temporal cortex (area TEv, area 20)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.09756
tuberculosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.059561
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.35773
GTEX-XUYS-0002-SM-47JXL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.12906
BL701 (TBK1)	NURSA Protein Complexes	1.0	null
PMC2939656__F4	PFOCR Pathway Figure Associations 2023	1.0	null
mRNA_ASCL1_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
PMC4172957__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Intrinsic component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.799
BL6616 (CDC42EP1)	NURSA Protein Complexes	1.0	null
PMC5319840__F3	PFOCR Pathway Figure Associations 2024	1.0	null
PMC2656226__F9	PFOCR Pathway Figure Associations 2024	1.0	null
A-Vietnam-1203-2004(H5N1)_7Hour_None_GSE43204	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.81113
Lateral geniculate body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.677
18787207-TableS2	GeneSigDB Published Gene Signatures	1.0	null
Capsular epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.655
into	GeneRIF Biological Term Annotations	1.0	null
Human immunodeficiency virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.653
BL5800 (GSG2)	NURSA Protein Complexes	1.0	null
BL6012 (PHIP)	NURSA Protein Complexes	1.0	null
BL5030 (CHD6)	NURSA Protein Complexes	1.0	null
somewhat	GeneRIF Biological Term Annotations	1.0	null
links	GeneRIF Biological Term Annotations	1.0	null
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.432
GSE189772,GSE189773_3_v_2_fbxo11_human	RummaGEO Gene Perturbation Signatures	1.0	null
Astrocyte projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.594
adjacent	GeneRIF Biological Term Annotations	1.0	null
BL2458 (UBE2L3)	NURSA Protein Complexes	1.0	null
Vesicular gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.585
proliferative glomerulonephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.450324
BL4625 (RBMX2)	NURSA Protein Complexes	1.0	null
PMC3752952__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.394
extracellular region	LOCATE Curated Protein Localization Annotations	1.0	null
Obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.579
zonula adherens	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.936432
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
Myocarditis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.31
PMC6435069__F1	PFOCR Pathway Figure Associations 2024	1.0	null
SC-28195 (KLF9)	NURSA Protein Complexes	1.0	null
GSE233548_3_v_0_plscr1_human	RummaGEO Gene Perturbation Signatures	1.0	null
BL2712 (FANCE)	NURSA Protein Complexes	1.0	null
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.883
Alzheimer Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
Adult Burkitt Lymphoma	DisGeNET Gene-Disease Associations	1.0	null
CAPAN2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49854
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34754
blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066952
Septicemic plague	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.18
bladder	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Deficiency Of Steroid 21-Monooxygenase	DisGeNET Gene-Disease Associations	1.0	null
H3K4me1_heart_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-P4PP-0005-SM-2HMKX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.19174
BL2779 (SUV39H1)	NURSA Protein Complexes	1.0	null
Adrenal gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.983
GSE125014_6_v_2_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC11118997-12931_2024_2848_MOESM1_ESM.xlsx-Table_S4-Table_S4_The_result_of_MR_analysis_and_sensitivity_analysis_for_IPF_susceptibility_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1774
MOLP2	CCLE Cell Line Gene CNV Profiles	1.0	1.89226
Liver disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.869
BL3742 (CBX6)	NURSA Protein Complexes	1.0	null
NCI-H2369	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.2939
PMC5239781__F1	PFOCR Pathway Figure Associations 2023	1.0	null
BL2793 (TRIM24)	NURSA Protein Complexes	1.0	null
SC-30169 (NR0B2)	NURSA Protein Complexes	1.0	null
anticoagulant	GeneRIF Biological Term Annotations	1.0	null
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.335
Thrombocytopenia due to platelet alloimmunization	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.354
BL699 (DIDO1)	NURSA Protein Complexes	1.0	null
PMC3766629__F6	PFOCR Pathway Figure Associations 2024	1.0	null
pulmonary tuberculosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.166095
Retrosplenial region	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.642
peptideactivated	GeneRIF Biological Term Annotations	1.0	null
Obstructive lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.35
BL482 (MAP3K7IP3)	NURSA Protein Complexes	1.0	null
Chromosomal deletion syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.298
BL5576 (CEP110)	NURSA Protein Complexes	1.0	null
BL2290 (BTBD12)	NURSA Protein Complexes	1.0	null
BL1475 (PNKP)	NURSA Protein Complexes	1.0	null
SC-583 (CREBBP)	NURSA Protein Complexes	1.0	null
plasma cell	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Autistic Disorder	CTD Gene-Disease Associations	1.0	2.88009
Graves Disease	DisGeNET Gene-Disease Associations	1.0	null
PMC3024260__F1	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-OOBJ-0006-SM-2I3F4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.827391
ChIP_SETDB1_19884257	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
known	GeneRIF Biological Term Annotations	1.0	null
methylprednisolone_rattus norvegicus_gpl341_gds972	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-REY6-1726-SM-48FDL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.33182
POLR2A_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RERFLCKJ	CCLE Cell Line Gene CNV Profiles	1.0	1.33932
BL2255 (PRKRIR)	NURSA Protein Complexes	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
PMC6759579__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Astrocyte_Cortex_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
extracellular vesicle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.057922
bronchoalveolar	GeneRIF Biological Term Annotations	1.0	null
GATA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0942
BL755 (CSNK2A2)	NURSA Protein Complexes	1.0	null
BL458 (TRIP4)	NURSA Protein Complexes	1.0	null
Prion disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.394
PMC8719356-NIHMS1762846-supplement-2.xlsx-cluster_EC2_x_cluster_EC1-ID_TCF15	Rummagene Transcription Factor Associations 2026	1.0	null
H3K9ac_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GTEX-OXRO-1226-SM-48TDL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.30874
Coronary Artery Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
Brain endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.184
BL1242 (MAML2)	NURSA Protein Complexes	1.0	null
BL5906 (NFRKB)	NURSA Protein Complexes	1.0	null
Thrombosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.335
psych	GAD High Level Gene-Disease Associations	1.0	0.293278
SNU1214	CCLE Cell Line Gene CNV Profiles	-1.0	-1.99276
GTEX-S33H-0005-SM-2XCAL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.945695
GTEX-TKQ2-1726-SM-4DXUP	GTEx Tissue Sample Gene Expression Profiles	1.0	2.1587
GTEX-RUSQ-1026-SM-2TF6V	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04857
Polymorphonuclear neutrophil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.172
PMC11979751-table_s2_markers_elad055.xlsx-Melanoma_state_immune_markers-AP1_JUN	Rummagene Transcription Factor Associations 2026	1.0	null
BL5324 (DUSP10)	NURSA Protein Complexes	1.0	null
doxorubicin_homo sapiens_gpl570_gse46493	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
adrenal gland	GTEx Tissue Gene Expression Profiles	1.0	1.40918
gamma-secretase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.639
G70101JE	GlyGen Glycosylated Proteins	1.0	null
nephritis	GeneRIF Biological Term Annotations	1.0	null
GTEX-XQ3S-0006-SM-4BOQ4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-2.07532
deposits	GeneRIF Biological Term Annotations	1.0	null
studies	GeneRIF Biological Term Annotations	1.0	null
Contact dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.027
bf2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.567
G10486CT	GlyGen Glycosylated Proteins	1.0	null
PMC4077819__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Glycocalyx	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.591
sle	GeneRIF Biological Term Annotations	1.0	null
GTEX-XPT6-0006-SM-4B66Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.871395
Reticulocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.391
GTEX-WCDI-0008-SM-47JYE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.70837
LNCAP-C4-2B cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.654
JJN3	CCLE Cell Line Gene CNV Profiles	1.0	1.8728
more	GeneRIF Biological Term Annotations	1.0	null
PMC6637639__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Nucleus pulposus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.259
Ferroxidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.579
Pemphigus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.11
BL6425 (CCNH)	NURSA Protein Complexes	1.0	null
Phosphopantothenoylcysteine decarboxylase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.978
18318837-TableS1	GeneSigDB Published Gene Signatures	1.0	null
BL2851 (MED18)	NURSA Protein Complexes	1.0	null
BL4381 (NASP)	NURSA Protein Complexes	1.0	null
BL469 (AURKA)	NURSA Protein Complexes	1.0	null
pcr	GeneRIF Biological Term Annotations	1.0	null
PMC3623009__F1	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-QDVJ-0226-SM-2I5FV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00088
Pancreas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.308
Atherosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.758
BL1730 (SPEN)	NURSA Protein Complexes	1.0	null
Vascular endothelial glycocalyx	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.727
BL6436 (CCNL2)	NURSA Protein Complexes	1.0	null
Hemolytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.121
PMC5798330__F2	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-S4Z8-1826-SM-3K2BH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07448
Choroid plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.398
spp	GeneRIF Biological Term Annotations	1.0	null
Neuromyelitis optica	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.555
worse	GeneRIF Biological Term Annotations	1.0	null
GTEX-PLZ6-0226-SM-3P61I	GTEx Tissue Sample Gene Expression Profiles	1.0	1.49356
cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046915
Autistic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.803
GSE114284_4_v_3_irf1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BL3893 (RAD9A)	NURSA Protein Complexes	1.0	null
nearby	GeneRIF Biological Term Annotations	1.0	null
BL3923 (PPP4C)	NURSA Protein Complexes	1.0	null
Salpingitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
PMC2966895__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Prostate gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.95
Vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.413
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.39025
Axolemma	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.592
BL1356 (TAF15)	NURSA Protein Complexes	1.0	null
RFX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4879
ZNF140	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0158
kidney	HPA Tissue Gene Expression Profiles	1.0	1.01872
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.307
RAMOS-2G6-4C10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
positivity	GeneRIF Biological Term Annotations	1.0	null
Bpe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.989
PMC8046170__F3	PFOCR Pathway Figure Associations 2023	1.0	null
RELA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3333
pioglitazone_rattus norvegicus_gpl341_gse21329	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC1143	CCLE Cell Line Gene CNV Profiles	1.0	1.41344
BL4144 (USP35)	NURSA Protein Complexes	1.0	null
SW1990	CCLE Cell Line Gene CNV Profiles	1.0	2.4432
C4A	Pathway Commons Protein-Protein Interactions	1.0	null
Hepatobiliary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.343
Nonparenchymal liver cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.532
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31925
specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.059767
GTEX-U3ZN-0006-SM-3DB7Y	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.916158
polymorphisms	GeneRIF Biological Term Annotations	1.0	null
PMC5166441__F1	PFOCR Pathway Figure Associations 2023	1.0	null
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2621
JL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
GSE211262,GSE211263_3_v_1_pbrm1_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-OHPK-1326-SM-3MJGN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.28509
BL2296 (EDC4)	NURSA Protein Complexes	1.0	null
ZSCAN31	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.0969
internal female genital organ	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Endocytic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.768
transplant	GeneRIF Biological Term Annotations	1.0	null
Cuboid bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.609
hippocampus (hippocampal formation)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.958956
HAL-01	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.886
GTEX-O5YT-0726-SM-3MJHA	GTEx Tissue Sample Gene Expression Profiles	1.0	0.92153
Female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.26
Umbilical vein endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.729
BL2219 (HPS3)	NURSA Protein Complexes	1.0	null
PMC7709131__F1	PFOCR Pathway Figure Associations 2023	1.0	null
GTEX-S4Q7-1426-SM-3K2B9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.836796
GSE114284_1_v_5_irf1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14475
SMRT-22465074-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
PMC7161485__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Osteoporosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
GTEX-WFG7-0001-SM-3P61S	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.20662
Fasciitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.158
PMC11921655-12959_2025_709_MOESM1_ESM.xlsx-MI_related_target-OMIM_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
Type 1 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.623
GTEX-REY6-0526-SM-2TF5M	GTEx Tissue Sample Gene Expression Profiles	1.0	0.963467
PMC6563602__F1	PFOCR Pathway Figure Associations 2024	1.0	null
KMOE-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
outcome	GeneRIF Biological Term Annotations	1.0	null
GSE202434,GSE202438_8_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Periodontal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.423
hypersensitivity reaction type ii disease	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
BL6583 (NUMB)	NURSA Protein Complexes	1.0	null
BL9121 (CDC7)	NURSA Protein Complexes	1.0	null
Disease of mental health	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.371
risk	GeneRIF Biological Term Annotations	1.0	null
Parkinson's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.695
Autoimmune thrombocytopenic purpura	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.391
leads	GeneRIF Biological Term Annotations	1.0	null
GTEX-XAJ8-0006-SM-46MVM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.12325
PA-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.018
skeletal muscle	HPA Tissue Gene Expression Profiles	-1.0	-1.91929
pustulosis of palm and sole	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.902389
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-D_ATF4-def_vs_HCT116_Tg2-Supplementary_Table_2D_Contrast_ATF4-def_Tg_2h_vs_HCT116Tg_2h_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
PPARG-20176806-THIOMACROPHAGE-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.67783
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843689
Dendritic lamellar body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.76
BL1316 (GSK3B)	NURSA Protein Complexes	1.0	null
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Perturb_2855_Mut_SPOP_SRP404927	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	6.61129
PMC10195082-elife-82057-supp1.xlsx-RNAseq_DUX4-DUX4_geneName_DUX4	Rummagene Transcription Factor Associations 2026	1.0	null
SK-MEL-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.841521
Inflammatory bowel disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.715
year	GeneRIF Biological Term Annotations	1.0	null
creb1_22108299_lung_lof_mouse_gpl1261_gds3660	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.571437
CD46	Pathway Commons Protein-Protein Interactions	1.0	null
GTEX-UPIC-0226-SM-3GADO	GTEx Tissue Sample Gene Expression Profiles	1.0	0.905432
vesicle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.178299
BL8232 (TOP3A)	NURSA Protein Complexes	1.0	null
NCC010	COSMIC Cell Line Gene Mutation Profiles	1.0	null
detection	GeneRIF Biological Term Annotations	1.0	null
BL1572 (ITCH)	NURSA Protein Complexes	1.0	null
measurement	GeneRIF Biological Term Annotations	1.0	null
GSE121198,GSE129779_3_v_1_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Synucleinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.704
burkitt lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.498832
Gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
ME-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CBC331 (ARAF)	NURSA Protein Complexes	1.0	null
GSE207302,GSE207303_0_v_2_tp53bp2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
protein-containing complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.988
GTEX-X15G-0526-SM-3NMB7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.835786
PMC12433390-262_2025_4164_MOESM1_ESM.pdf-94-Lung_TLF_TBPL1	Rummagene Transcription Factor Associations 2026	1.0	null
glomerulopathy	GeneRIF Biological Term Annotations	1.0	null
c4bbinding	GeneRIF Biological Term Annotations	1.0	null
PMC6296511__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Female reproductive organ cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
Hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.232
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.451
GTEX-R55D-0008-SM-48FEV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.956445
PMC7998562__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Autoimmune disease of gastrointestinal tract	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.898
G82830MN	GlyGen Glycosylated Proteins	1.0	null
Degeneration of macula and posterior pole	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.262
Liver reticuloendothelial system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.593
Kidney Diseases	CTD Gene-Disease Associations	1.0	2.00856
BL476 (AHCTF1)	NURSA Protein Complexes	1.0	null
PMC3091670__F3	PFOCR Pathway Figure Associations 2023	1.0	null
non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.371
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
g0086	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.632
immunosuppression	GeneRIF Biological Term Annotations	1.0	null
PMC4022110__F1	PFOCR Pathway Figure Associations 2024	1.0	null
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
cd55	GeneRIF Biological Term Annotations	1.0	null
G71146HJ	GlyGen Glycosylated Proteins	1.0	null
GTEX-POMQ-0006-SM-33HBY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.12664
Severe acute respiratory syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
IgA immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.346
pepd	GeneRIF Biological Term Annotations	1.0	null
PMC5319840__SF3_2	PFOCR Pathway Figure Associations 2023	1.0	null
transplanted	GeneRIF Biological Term Annotations	1.0	null
Liver Cirrhosis	CTD Gene-Disease Associations	1.0	1.56068
GTEX-N7MS-0008-SM-4E3JI	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.40945
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.170371
Autism	DisGeNET Gene-Disease Associations	1.0	null
PMC12502296-40246_2025_829_MOESM3_ESM.xlsx-Supplementary_Table_6-Supplementary_Table_6_Significant_eQTLs_MR_results_between_the_expression_of_druggable_genes_and_NSCLC_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
minimal	GeneRIF Biological Term Annotations	1.0	null
BB-44-SX65_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.284112
Sporozoite	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.933
PMC2656226__F9	PFOCR Pathway Figure Associations 2023	1.0	null
PMC4727420__F2	PFOCR Pathway Figure Associations 2023	1.0	null
G45495MK	GlyGen Glycosylated Proteins	1.0	null
BL6311 (ELL)	NURSA Protein Complexes	1.0	null
GSE71468,GSE76476_2_v_1_rbfox1_human	RummaGEO Gene Perturbation Signatures	1.0	null
predisposition	GeneRIF Biological Term Annotations	1.0	null
CBC752 (USP9X)	NURSA Protein Complexes	1.0	null
digestive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
prognosis	GeneRIF Biological Term Annotations	1.0	null
GTEX-PWOO-2326-SM-2S1PQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06959
Prefrontal cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.552
serum	GeneRIF Biological Term Annotations	1.0	null
18786252-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.39
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044946
TCF21	ChEA Transcription Factor Targets	1.0	null
GTEX-SJXC-0526-SM-2XCFG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.63047
MHC class I peptide loading complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.027
c4bq0	GeneRIF Biological Term Annotations	1.0	null
GTEX-WFG8-0126-SM-4LVMH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.77759
PMC5241319__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Autoimmune disease of the nervous system	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
YD8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54548
BL938 (SP1)	NURSA Protein Complexes	1.0	null
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058021
Oropharynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.823
overall	GeneRIF Biological Term Annotations	1.0	null
IGKV4-1	Pathway Commons Protein-Protein Interactions	1.0	null
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.21595
PMC7411130__F3	PFOCR Pathway Figure Associations 2024	1.0	null
BL2365 (KIAA0528)	NURSA Protein Complexes	1.0	null
BL8579 (MAP3K7IP1)	NURSA Protein Complexes	1.0	null
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070267
primary motor-sensory cortex (samples)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14948
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053329
19843711-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.767
18425577-TableS3a	GeneSigDB Published Gene Signatures	1.0	null
Parasitic infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.002
Central nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.135
Autoimmune disease of urogenital tract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.139
PMC6527583__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Cell surface	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.598
Blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.922
BL6443 (CCNT2)	NURSA Protein Complexes	1.0	null
adrenal	GeneRIF Biological Term Annotations	1.0	null
Melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.237
Bacterial sepsis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.005
BL1796 (BCL11A)	NURSA Protein Complexes	1.0	null
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.221
Excretory gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.833
GTEX-X8HC-0006-SM-46MV6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-3.1713
Nephron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.97
cho cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.78522
20460173-ImmPortComprehensiveListofImmune-RelatedGenes	GeneSigDB Published Gene Signatures	1.0	null
PMC11096100-41588_2024_1714_MOESM3_ESM.xlsx-ST18-Unnamed_1_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
t69-brown-adipose_male_8w	MoTrPAC Rat Endurance Exercise Training	1.0	4.11834
secretory granule membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.42396
Diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.593
immune system disease	DISEASES Curated Gene-Disease Association Evidence Scores	1.0	null
fh20	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.728
Digestive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
t70-white-adipose_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	1.44458
developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.623751
GTEX-P4QR-0008-SM-48TE2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.01173
Telencephalon	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.383
SNRPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3201
abnormalities	GeneRIF Biological Term Annotations	1.0	null
Autosomal dominant disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Autistic Disorder	HuGE Navigator Gene-Phenotype Associations	1.0	null
CALU-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.00166
igg	GeneRIF Biological Term Annotations	1.0	null
Pertussis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.142
mediodorsal nucleus of thalamus_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.22324
psychotic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.160387
Edema	CTD Gene-Disease Associations	1.0	2.05595
SATB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5345
Psoriasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.286
GTEX-XMK1-0626-SM-4B65A	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19777
BL5049 (POLD3)	NURSA Protein Complexes	1.0	null
Autoimmune hemolytic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.8
18006812-TableS1	GeneSigDB Published Gene Signatures	1.0	null
PMC6361534__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.883
GTEX-NL3G-0008-SM-4E3JX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.912835
PMC4974115__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Cardiomegaly	CTD Gene-Disease Associations	1.0	1.50725
shortterm	GeneRIF Biological Term Annotations	1.0	null
PMC7568023__F2	PFOCR Pathway Figure Associations 2023	1.0	null
PMC7019324__F7	PFOCR Pathway Figure Associations 2024	1.0	null
GSE238018_1_v_4_mxra8_human	RummaGEO Gene Perturbation Signatures	1.0	null
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.5445
GTEX-TMZS-0326-SM-3DB9P	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.891473
PMC5239781__F1	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-XBED-0126-SM-47JY7	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14635
infection	GAD High Level Gene-Disease Associations	1.0	0.293278
BL6127 (OXSR1)	NURSA Protein Complexes	1.0	null
Dental plaque	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.747
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.838431
Mild cognitive impairment	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.645
Liver Diseases	CTD Gene-Disease Associations	1.0	1.78416
strong	GeneRIF Biological Term Annotations	1.0	null
GSE140965_1_v_4_mybpc3_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-X8HC-2726-SM-46MUA	GTEx Tissue Sample Gene Expression Profiles	1.0	1.17407
Retinal drusen	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
Rhinitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.023
BL1797 (BCL11A)	NURSA Protein Complexes	1.0	null
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9171
BL172 (MDM2)	NURSA Protein Complexes	1.0	null
BL7740 (CCNK)	NURSA Protein Complexes	1.0	null
burkitt lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.501965
PMC8232085__F4	PFOCR Pathway Figure Associations 2024	1.0	null
flavivirus	GeneRIF Biological Term Annotations	1.0	null
Primary immunodeficiency disease	DISEASES Curated Gene-Disease Association Evidence Scores 2025	1.0	4.0
BL6510 (FBXO38)	NURSA Protein Complexes	1.0	null
PMC8064175__F5	PFOCR Pathway Figure Associations 2024	1.0	null
BL4553 (TRIM33)	NURSA Protein Complexes	1.0	null
BL3347 (ATN1)	NURSA Protein Complexes	1.0	null
BL5995 (ZNF638)	NURSA Protein Complexes	1.0	null
GSE107956,GSE107957_0_v_1_ythdf2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Human brain microvascular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.755
acrosomal vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.234533
Aortic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.084
proportionate	GeneRIF Biological Term Annotations	1.0	null
H2595	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.235
Autosomal genetic disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065
Nephrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.728
PMC11133462-41467_2024_47218_MOESM5_ESM.xlsx-IL-10_SBNO2_KD-symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GSE221327_1_v_0_clpp_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-XV7Q-1426-SM-4BRWA	GTEx Tissue Sample Gene Expression Profiles	1.0	1.63328
ss92	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.847
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.921299
PMC2704572__F1	PFOCR Pathway Figure Associations 2024	1.0	null
SCABER	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-WRHU-0006-SM-3MJF6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.985972
GTEX-R3RS-0005-SM-3GAEH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-3.1713
Bundle sheath cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.111
spinal cord	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
GSE189772,GSE189773_0_v_5_fbxo11_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Interstitial lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.332
Pellicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.608
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.564035
Flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.996
PMC9235320-mmc2.xlsx-ST9_eQTL-MR-results-Supplementary_Table_9A_The_effects_of_whole_blood_transcripts_on_COVID-19_severity_with_suggestive_Mendelian_randomization_evidence_P_0_05_using_Genomicc_data_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
Biofilm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.486
hippocampus (hippocampal formation)_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.884537
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.854791
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939231
BL2777 (NF2)	NURSA Protein Complexes	1.0	null
Initial triggering of complement	Reactome Pathways 2014	1.0	null
alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
GSE184087_4_v_1_tert_human	RummaGEO Gene Perturbation Signatures	1.0	null
BL6379 (BCAR1)	NURSA Protein Complexes	1.0	null
Disease of metabolism	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.869
amygdaloid complex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27623
Retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.08
Crohn's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.467
BL8570 (MAP3K2)	NURSA Protein Complexes	1.0	null
BL5590 (MYBL2)	NURSA Protein Complexes	1.0	null
SC-9087 (NR2C1)	NURSA Protein Complexes	1.0	null
Column	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.109
capillaries	GeneRIF Biological Term Annotations	1.0	null
BL327 (RFXAP)	NURSA Protein Complexes	1.0	null
Dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.944
serine-type endopeptidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.274
Insulin Resistance	CTD Gene-Disease Associations	1.0	1.08019
arthritis	GeneRIF Biological Term Annotations	1.0	null
Antiphospholipid syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.051
immunostaining	GeneRIF Biological Term Annotations	1.0	null
identification	GeneRIF Biological Term Annotations	1.0	null
Retina	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.826
Fatty Liver, Alcoholic	CTD Gene-Disease Associations	1.0	1.07625
modules	GeneRIF Biological Term Annotations	1.0	null
donor	GeneRIF Biological Term Annotations	1.0	null
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.71953
BL5892 (MAP4K4)	NURSA Protein Complexes	1.0	null
BL973 (PNKP)	NURSA Protein Complexes	1.0	null
CPCN	CCLE Cell Line Gene CNV Profiles	1.0	1.65701
Venule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.255
treated	GeneRIF Biological Term Annotations	1.0	null
Autoimmune neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.087
Vertebra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.262
ACF complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.688
SUPHD1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.22576
Intravenous Immunoglobulin	DrugBank Drug Targets	1.0	null
GTEX-VJYA-1726-SM-3NMDQ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.36894
BL2840 (UIMC1)	NURSA Protein Complexes	1.0	null
Organ system cancer	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	0.749
polyarthritis	GeneRIF Biological Term Annotations	1.0	null
Adult_Liver	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	1.9412
primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042869
PMC7024062__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Needle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.766
Gingival fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.17
BL5622 (AKAP1)	NURSA Protein Complexes	1.0	null
predictive	GeneRIF Biological Term Annotations	1.0	null
Rett syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.073
Hyperlipidemias	CTD Gene-Disease Associations	1.0	1.03235
GTEX-X5EB-0008-SM-46MU3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.83109
Purpura	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.886
very	GeneRIF Biological Term Annotations	1.0	null
GTEX-XMK1-0001-SM-4B64F	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2018
FCN1	Pathway Commons Protein-Protein Interactions	1.0	null
BL1757 (MED23)	NURSA Protein Complexes	1.0	null
Carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.067
PMC6169142__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Lipoid nephrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.179
initiation	GeneRIF Biological Term Annotations	1.0	null
PMC7550403__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Intrinsic component of endoplasmic reticulum membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.003
genotype	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826486
BL6202 (ESRRA)	NURSA Protein Complexes	1.0	null
demonstration	GeneRIF Biological Term Annotations	1.0	null
alzheimer's disease	GAD Gene-Disease Associations	1.0	null
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40449
tuberculosis	GeneRIF Biological Term Annotations	1.0	null
Autoimmune disease of central nervous system	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.731
NR2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6547
PMC11979751-table_s2_markers_elad055.xlsx-Melanoma_state_markers-AP1_JUN	Rummagene Transcription Factor Associations 2026	1.0	null
polyclonal	GeneRIF Biological Term Annotations	1.0	null
18435859-ShorterGeneList	GeneSigDB Published Gene Signatures	1.0	null
na101	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.148
BL5026 (CHD3)	NURSA Protein Complexes	1.0	null
B-50 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.863
Polymorphonuclear leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.586
GTEX-P4QS-1126-SM-3NMD5	GTEx Tissue Sample Gene Expression Profiles	1.0	0.914559
cardiac	GeneRIF Biological Term Annotations	1.0	null
alitretinoin_rattus norvegicus_gpl85_gse3952	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FOXA1_01_233	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.12755
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3847
C5	Pathway Commons Protein-Protein Interactions	1.0	null
PMC4300866__F1	PFOCR Pathway Figure Associations 2023	1.0	null
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61323
Leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.354
PMC8705098__F2	PFOCR Pathway Figure Associations 2024	1.0	null
BL6755 (PHF8)	NURSA Protein Complexes	1.0	null
PMC3433899__F3	PFOCR Pathway Figure Associations 2024	1.0	null
BL8641 (MINK1)	NURSA Protein Complexes	1.0	null
creatinine	GeneRIF Biological Term Annotations	1.0	null
BL2220 (HPS3)	NURSA Protein Complexes	1.0	null
inflammatory bowel disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.135938
cytoplasmic membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.050525
RORB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0511
COVID-19	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.892
BL2289 (BTBD12)	NURSA Protein Complexes	1.0	null
Vaccinia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.742
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	3.24385
a-NEK7 (NEK7)	NURSA Protein Complexes	1.0	null
allelic	GeneRIF Biological Term Annotations	1.0	null
BL5763 (IRS2)	NURSA Protein Complexes	1.0	null
GTEX-UPIC-0926-SM-4IHLV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.7466
high-density lipoprotein particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.19
GTEX-OHPL-1326-SM-3MJGG	GTEx Tissue Sample Gene Expression Profiles	1.0	2.10312
BL8312 (PAWR)	NURSA Protein Complexes	1.0	null
PMC4172957__F6	PFOCR Pathway Figure Associations 2023	1.0	null
receptoractivating	GeneRIF Biological Term Annotations	1.0	null
cerebellum_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.924985
BL991 (INCENP)	NURSA Protein Complexes	1.0	null
striatum_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.03769
dense	GeneRIF Biological Term Annotations	1.0	null
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047066
GTEX-P4QT-0126-SM-2I3FL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.976822
obsessive-compulsive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
GTEX-U3ZN-0226-SM-3DB8D	GTEx Tissue Sample Gene Expression Profiles	1.0	1.65289
GTEX-XMD1-0006-SM-4AT4Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.881024
CBC1592 (ERBB2)	NURSA Protein Complexes	1.0	null
integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.055736
liver_d	HPA Tissue Sample Gene Expression Profiles	1.0	2.04893
SC-543 (ESR1)	NURSA Protein Complexes	1.0	null
hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.081342
SW 900	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.08818
BL3628 (KDM3A)	NURSA Protein Complexes	1.0	null
Mast cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.725
Primary immunodeficiency disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.898
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.15755
Communication disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.13
SK-MG-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
pre-eclampsia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.638
Vascular Diseases	CTD Gene-Disease Associations	1.0	1.18126
hypersensitivity reaction type ii disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.457487
occurs	GeneRIF Biological Term Annotations	1.0	null
detection of molecule of bacterial origin	GO Biological Process Annotations 2025	1.0	null
hippocampus (hippocampal formation)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.51623
T84	COSMIC Cell Line Gene Mutation Profiles	1.0	null
G14994KB	GlyGen Glycosylated Proteins	1.0	null
BL2138 (ROCK1)	NURSA Protein Complexes	1.0	null
BL6925 (FGFR1OP)	NURSA Protein Complexes	1.0	null
GTEX-U8XE-1526-SM-4E3HT	GTEx Tissue Sample Gene Expression Profiles	1.0	1.85692
BL8106 (AHDC1)	NURSA Protein Complexes	1.0	null
Myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.655
delivery	GeneRIF Biological Term Annotations	1.0	null
therapy	GeneRIF Biological Term Annotations	1.0	null
GTEX-XUZC-0005-SM-4BOQ8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.827468
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.235
PMC4682646__F1	PFOCR Pathway Figure Associations 2024	1.0	null
lupus	GeneRIF Biological Term Annotations	1.0	null
liver_a	HPA Tissue Sample Gene Expression Profiles	1.0	2.34397
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939231
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826486
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.847795
PMC8307963__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Tenascin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.379
RCOR2-21632747-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
BL5361 (SSH1)	NURSA Protein Complexes	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
PMC7568023__F2	PFOCR Pathway Figure Associations 2024	1.0	null
mediodorsal nucleus of thalamus_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.887921
histocompatibility	GeneRIF Biological Term Annotations	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61323
BL2700 (STK24)	NURSA Protein Complexes	1.0	null
Memory Disorders	CTD Gene-Disease Associations	1.0	1.17728
size	GeneRIF Biological Term Annotations	1.0	null
stroke	GeneRIF Biological Term Annotations	1.0	null
Hemorrhage	CTD Gene-Disease Associations	1.0	1.79292
BL2847 (MED27)	NURSA Protein Complexes	1.0	null
Muscle tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.45
OCI-LY-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46527
Allergic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.511
c3bc4b	GeneRIF Biological Term Annotations	1.0	null
Meningoencephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.172
Rheumatic fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.243
Developmental and epileptic encephalopathy 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.12
BL4071 (ILKAP)	NURSA Protein Complexes	1.0	null
Synovia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.136
GTEX-Q734-1426-SM-48TZQ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.980925
Macular retinal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.014
Gill filament	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.569
BL1734 (TBL1XR1)	NURSA Protein Complexes	1.0	null
Fungal infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.644
KM12	CCLE Cell Line Gene CNV Profiles	-1.0	-1.96263
NALM-6	COSMIC Cell Line Gene Mutation Profiles	1.0	null
followup	GeneRIF Biological Term Annotations	1.0	null
GTEX-WHSB-1826-SM-3TW8M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.16971
GSE245407,GSE245412_0_v_1_smurf1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.795
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.59777
BL6780 (NIPBL)	NURSA Protein Complexes	1.0	null
GSE202434,GSE202438_4_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
systemic lupus erythematosus	GAD Gene-Disease Associations	1.0	null
PMC9170563-12885_2022_9665_MOESM3_ESM.docx-0-Candidata_target_genes_of_CEBPB_8_CEBPB	Rummagene Transcription Factor Associations 2026	1.0	null
Collagen disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.367
cerebrovascular disease	GAD Gene-Disease Associations	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064557
surface	GeneRIF Biological Term Annotations	1.0	null
GSE182179_5_v_4_kdsr_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Glomerular epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.687
b12	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.036
lepirudinanticoagulated	GeneRIF Biological Term Annotations	1.0	null
SARS-BatSRBD_36Hour_23935999_GSE47960	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.79996
BL2371 (SYK)	NURSA Protein Complexes	1.0	null
Subarachnoid space	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.972
PMC4587761__F3	PFOCR Pathway Figure Associations 2023	1.0	null
LOXIMVI	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-WHSE-0006-SM-3NMBW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1261
BL6174 (TDP1)	NURSA Protein Complexes	1.0	null
Adipose tissue	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.178
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08521
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059693
n92	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.797
Alevin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.55
Infective endocarditis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.006
PMC12685885-Table1.xlsx-Table_S9-Du_PanCancer_SOX6_TrsFib_SOX6	Rummagene Transcription Factor Associations 2026	1.0	null
PMC10384352__F2	PFOCR Pathway Figure Associations 2024	1.0	null
GTEX-OIZH-1626-SM-2HMKI	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.44271
20436685-ST5-2	GeneSigDB Published Gene Signatures	1.0	null
Astrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.181
GTEX-U4B1-0626-SM-3DB8L	GTEx Tissue Sample Gene Expression Profiles	1.0	1.1081
BL8325 (CCDC86)	NURSA Protein Complexes	1.0	null
Amino acid metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.079
Dermatomycosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.068
MC116	COSMIC Cell Line Gene Mutation Profiles	1.0	null
b-50 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.02907
dichroism	GeneRIF Biological Term Annotations	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.885862
Ulcerative Colitis	DisGeNET Gene-Disease Associations	1.0	null
A-Vietnam-1203_CIP048_RG3-2004(H5N1)mutPB1-F2del_0Hour_None_GSE43203	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.0667
Down syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121
long	GeneRIF Biological Term Annotations	1.0	null
CAMA1	CCLE Cell Line Gene CNV Profiles	1.0	1.42418
888	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.42683
TRAF4 (TRAF4)	NURSA Protein Complexes	1.0	null
BL3195 (CDX2)	NURSA Protein Complexes	1.0	null
Eye degenerative disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.065