association	dataset	threshold value	standardized value
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841373
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848206
PR, GR	MotifMap Predicted Transcription Factor Targets	1.0	null
HUP-T4	COSMIC Cell Line Gene CNV Profiles	1.0	2.14508
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45215
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
RT4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14228
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982906
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.893909
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
19658189-TableS5	GeneSigDB Published Gene Signatures	1.0	null
SNU601	CCLE Cell Line Gene Expression Profiles	1.0	2.37787
KYM1	CCLE Cell Line Gene Expression Profiles	1.0	1.84884
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98374
WSU-DLCL2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
golgi apparatus	LOCATE Predicted Protein Localization Annotations	1.0	null
HS737T	CCLE Cell Line Gene Expression Profiles	-1.0	-1.63767
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
KP2	CCLE Cell Line Gene Expression Profiles	1.0	1.49936
SNU-423	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.929701
GSU	CCLE Cell Line Gene Expression Profiles	1.0	1.57464
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GRM	CCLE Cell Line Gene Expression Profiles	1.0	1.52331
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
HS600T	CCLE Cell Line Gene Expression Profiles	-1.0	-1.82043
HCC12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
BICR16	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74275
LI7	CCLE Cell Line Gene Expression Profiles	1.0	1.7566
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848206
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07558
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12102
OCI-AML3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
RCM1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.05806
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
HCV JFH-1_48Hour_20200238_GSE20948	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.50715
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61535
IM-95M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
NCI-H2804	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.914352
heart	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.00215
SNU620	CCLE Cell Line Gene Expression Profiles	1.0	2.65491
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-2.07934
DAN-G	COSMIC Cell Line Gene CNV Profiles	1.0	2.14508
Lassa Fever Virus_4hr_24069471_GSE41300	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.16617
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98374
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
HS 578T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98215
KPNRTBM1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62743
EGR1-20690147-ERYTHROLEUKEMIA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
HCC70	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.05881
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979567
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.57073
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03428
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
KMS34	CCLE Cell Line Gene Expression Profiles	-1.0	-2.3039
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
TGBC11TKB	CCLE Cell Line Gene Expression Profiles	1.0	3.40787
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
SNU410	CCLE Cell Line Gene Expression Profiles	1.0	1.60941
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
COLO679	CCLE Cell Line Gene Expression Profiles	1.0	1.37003
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0351
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Huntington's Disease_Lymphocyte_GSE8762	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.25401
Lassa Fever Virus_8hr_24069471_GSE41300	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.35813
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894628
HUH7	CCLE Cell Line Gene Expression Profiles	1.0	1.40494
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33959
SLR21	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45674
HS 940.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33169
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.89161
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899545
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42112
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39292
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2855
stomach	GTEx Tissue Gene Expression Profiles	1.0	0.944061
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56186
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.914352
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NCIH1339	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62947
ALEXANDERCELLS	CCLE Cell Line Gene Expression Profiles	1.0	1.9272
ncoa_22072566_ly2_lof_human_gpl570_gds4095	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.010005
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848206
COLO-704	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1258
AGS	CCLE Cell Line Gene Expression Profiles	1.0	1.88515
DV90	CCLE Cell Line Gene Expression Profiles	1.0	1.63947
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26549
ECC12	CCLE Cell Line Gene Expression Profiles	1.0	1.88848
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.89161
SW 480	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.929701
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25654
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03428
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15515
8MGBA	CCLE Cell Line Gene Expression Profiles	-1.0	-1.66907
MOGGUVW	CCLE Cell Line Gene Expression Profiles	-1.0	-1.73014
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
SNU520	CCLE Cell Line Gene Expression Profiles	1.0	1.5547
HS821T	CCLE Cell Line Gene Expression Profiles	-1.0	-2.96789
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47693
HEPG2	CCLE Cell Line Gene Expression Profiles	1.0	1.39508
HCV JFH-1_12Hour_20200238_GSE20948	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.98488
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26264
EGR1	ChEA Transcription Factor Targets	1.0	null
OCI-AML5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.865093
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36533
SKNAS	CCLE Cell Line Gene Expression Profiles	1.0	2.13762
SALL4	ChEA Transcription Factor Targets	1.0	null
heart	GTEx Tissue Gene Expression Profiles	1.0	0.946028
JHOS-4	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.05881
IM-95	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.588
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58415
786-O	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02323
BICR6	CCLE Cell Line Gene Expression Profiles	-1.0	-1.69761
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.939998
pancreas	GTEx Tissue Gene Expression Profiles	1.0	0.853008
cardiovascular system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.929701
CHL1	CCLE Cell Line Gene Expression Profiles	1.0	1.99247
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.929701
HCC1428	CCLE Cell Line Gene Expression Profiles	1.0	1.46707
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02323
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
COLO783	CCLE Cell Line Gene Expression Profiles	1.0	1.36882
CAL 54	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899545
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7171
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.848206
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42112
ISTMES1	CCLE Cell Line Gene Expression Profiles	1.0	1.67968
HMCB	CCLE Cell Line Gene Expression Profiles	1.0	2.27169
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7236
SALL4-22934838-CD34+-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
JHH-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02323
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.923195
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
NCIH1373	CCLE Cell Line Gene Expression Profiles	-1.0	-1.47651
NCI-H2023	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98374
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
NCIH1355	CCLE Cell Line Gene Expression Profiles	-1.0	-1.46051
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.914352
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6561
HS729	CCLE Cell Line Gene Expression Profiles	-1.0	-1.59387
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.939998
19658189-TableS3	GeneSigDB Published Gene Signatures	1.0	null
SW1271	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.05881
NCIH2081	CCLE Cell Line Gene Expression Profiles	-1.0	-1.75221
FU97	CCLE Cell Line Gene Expression Profiles	1.0	1.70903
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982906
ME-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.980474
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20445
JHH7	CCLE Cell Line Gene Expression Profiles	1.0	1.41384
CHP126	CCLE Cell Line Gene Expression Profiles	1.0	1.36004
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.86592
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
SNU-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.856131
VMRCRCZ	CCLE Cell Line Gene Expression Profiles	-1.0	-2.01153
MT-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39337
ovary	GTEx Tissue Gene Expression Profiles	1.0	1.42446
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899545
SUIT2	CCLE Cell Line Gene Expression Profiles	1.0	1.39834
SW1271	CCLE Cell Line Gene Expression Profiles	-1.0	-1.64745
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.01257
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44927
NCIH660	CCLE Cell Line Gene Expression Profiles	-1.0	-1.47869
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899545
THP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40659
UACC-257	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.929701
HOP-92	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36904
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.939998
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0848
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68947
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841373
Polycystic Ovary Syndrome_Skeletal muscle_GSE6798	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.49871
MV-4-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0094
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17666
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05723
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07637
OPM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857041
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2855
CAPAN2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.80497
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33169
HCC4006	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02386
OCUM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957477
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53852
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957477