association	dataset	threshold value	standardized value
NUGC2	CCLE Cell Line Gene CNV Profiles	1.0	2.08877
CAPAN1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.1848
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55258
NCI-H2347	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35949
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03786
PCM6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39576
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971434
kidney	GTEx Tissue Gene Expression Profiles	1.0	1.26292
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.75804
KP3	CCLE Cell Line Gene CNV Profiles	1.0	1.35658
heart	GTEx Tissue Gene Expression Profiles	-1.0	-1.03026
spleen	GTEx Tissue Gene Expression Profiles	-1.0	-0.844631
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.970361
MFE280	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67458
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.982843
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05095
single	GeneRIF Biological Term Annotations	1.0	null
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40112
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887147
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
SKMES1	CCLE Cell Line Gene CNV Profiles	1.0	1.3929
GDM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69095
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887147
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887147
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.90287
NCIH1048	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38824
CHP212	CCLE Cell Line Gene CNV Profiles	1.0	1.3885
significant	GeneRIF Biological Term Annotations	1.0	null
SNU119	CCLE Cell Line Gene CNV Profiles	-1.0	-1.85067
SNU886	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02564
snps	GeneRIF Biological Term Annotations	1.0	null
S117	CCLE Cell Line Gene CNV Profiles	1.0	1.9127
TGBC11TKB	CCLE Cell Line Gene CNV Profiles	1.0	1.35633
COLO 792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35949
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84454
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12756
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.843841
estradiol_homo sapiens_gpl570_gds3283	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18157
three	GeneRIF Biological Term Annotations	1.0	null
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46069
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35949
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.304
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.83718
HLE	CCLE Cell Line Gene CNV Profiles	1.0	1.78447
SF539	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887147
NCIH838	CCLE Cell Line Gene CNV Profiles	1.0	1.79954
MSTO211H	CCLE Cell Line Gene CNV Profiles	1.0	2.46883
SC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55307
PFEIFFER	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21998
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33397
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.91447
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09064
FU97	CCLE Cell Line Gene CNV Profiles	1.0	1.55601
OCIMY5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33261
CAL78	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
KYSE520	CCLE Cell Line Gene CNV Profiles	1.0	1.73058
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05693
NCIH2030	CCLE Cell Line Gene CNV Profiles	1.0	1.59936
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35949
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44361
KMH2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81945
colon	GTEx Tissue Gene Expression Profiles	1.0	1.41177
HCC2279	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57439
TE9	CCLE Cell Line Gene CNV Profiles	1.0	1.64311
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14076
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.981809
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.87541
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941863
their	GeneRIF Biological Term Annotations	1.0	null
TOLEDO	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48387
Breast cancer	GWAS Catalog SNP-Phenotype Associations	1.0	1.97969
888	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.64871
COLO320	CCLE Cell Line Gene CNV Profiles	1.0	1.87785
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.92822
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2651
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39087
DU4475	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49835
ACHN	CCLE Cell Line Gene CNV Profiles	1.0	1.45998
PIK3CA_druginhibition_57_GSE17785	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.22959
SNB19	CCLE Cell Line Gene CNV Profiles	1.0	2.78552
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-1.49596
Ovarian Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.81295
Breast cancer (male) 	GWAS Catalog SNP-Phenotype Associations	1.0	0.835701
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.886131
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21628
HT115	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51026
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02071
HCC2218	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41988
polymorphisms	GeneRIF Biological Term Annotations	1.0	null
SF268	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14076
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84454
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887147
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66745
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887147
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4588
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03786
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.73992
haplotypes	GeneRIF Biological Term Annotations	1.0	null
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46069
HCC70	CCLE Cell Line Gene CNV Profiles	1.0	1.41987
Birth Weight	HuGE Navigator Gene-Phenotype Associations	1.0	null
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.981809
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.982843
MCF7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32113
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6752
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.75518
SKNMC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37757
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02071
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.75518
HCC1937	CCLE Cell Line Gene CNV Profiles	1.0	1.99222
there	GeneRIF Biological Term Annotations	1.0	null
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14076
HCC78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50804
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4588
NCI-H2722	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24176
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.37647
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46069
CAL148	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47788
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00075
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30273
MDAMB157	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56599
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1047
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
U251MG	CCLE Cell Line Gene CNV Profiles	1.0	2.46183
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
NCIH1651	CCLE Cell Line Gene CNV Profiles	1.0	1.40487
LN18	CCLE Cell Line Gene CNV Profiles	1.0	1.73191
RI1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57698
KCIMOH1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88102
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.0684
TE5	CCLE Cell Line Gene CNV Profiles	1.0	1.33813
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.8747
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1047
Restless legs syndrome	GWAS Catalog SNP-Phenotype Associations	1.0	0.989242
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887147
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.23986
KYSE-150	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833876
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18808
risk	GeneRIF Biological Term Annotations	1.0	null
HCC78	CCLE Cell Line Gene CNV Profiles	1.0	1.83447
nucleotide	GeneRIF Biological Term Annotations	1.0	null
HS766T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80043
NCIH1105	CCLE Cell Line Gene CNV Profiles	1.0	1.60564
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52291
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.92822
KCI-MOH1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.28556
small intestine	GTEx Tissue Gene Expression Profiles	1.0	0.972298
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46069
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02071
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04988
KMS-12-BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24176
A3/KAW	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40264
HPAC	CCLE Cell Line Gene CNV Profiles	-1.0	-2.07376
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
MG63	CCLE Cell Line Gene CNV Profiles	1.0	1.55386
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61543
SF539	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.62434
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.92887
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40264
CDK9_druginhibition_183_GSE48258	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-0.188121
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.905028
NCI-H1650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8805
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.92822
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15885
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.915557
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.982843
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982448
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.79012
HPBALL	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4497
Breast Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.907186
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.42243
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24176
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.91447
breast	GeneRIF Biological Term Annotations	1.0	null
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.915557
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05948
