association	dataset	threshold value	standardized value
ZDHHC5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.96565
PCDHB11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6115
HES2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7924
496100380_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.27279
HNRNPK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.21174
FLI1::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5068
PCID2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99115
UFD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4363
PCTP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42512
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.5655
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6426
ITSN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53646
UBC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31806
COX7C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16364
PMC7997806-41397_2020_194_MOESM2_ESM.xlsx-MAGMA_GENE_SBP_AA-SYMBOL_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
ID3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80178
Nicotine dependence symptom count	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.6
GCDH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.97717
PCDHB8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23506
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.232
PMS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47788
FXYD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90273
Ferritin levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.569897
RAB3D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.27841
496100495_FWM_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.08269
UQCC6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77618
C11orf24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82446
ZNF75D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.9143
CNTRL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85191
MIS18BP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08338
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9431
PFKM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78668
NOXO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.89008
TBC1D14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8319
ZFP57	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6091
NPFF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.91819
BRI3BP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59069
MPDU1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26784
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4023
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.831
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8506
CSTB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.71407
KDELR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25776
USB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17006
CNOT10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.585
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.5196
CALCOCO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3777
KCNG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.58748
HNRNPAB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1892
BARHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2954
NFAT5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82024
LMBRD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87378
PGM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.84443
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.8622
APOBEC3H	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.0602
PMC10248509-Data_Sheet_5.CSV--GSE58294_DE-genes_AND_GSE66724_DE-Genes_AND_GSE41177_DE-Genes_NOT_Autophagy_NR4A2	Rummagene Transcription Factor Associations 2026	1.0	null
TPSG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79535
ZGRF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70889
NR2E1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15938
DLAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04089
RSRP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24679
GRM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.61065
ZNF443	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67201
RNF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80721
PLIN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57754
GLI3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.42927
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.6867
SPRY2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.52003
RPN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40914
KLF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32364
WNK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.34438
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.2133
CCDC136	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53744
ATP8B2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61696
HES6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.013
HYCC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55234
N4BP2L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89074
ERBB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53003
SIM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30072
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-Unnamed_47_AR	Rummagene Transcription Factor Associations 2026	1.0	null
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7203
CC2D1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63004
STAC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29079
GLI1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82064
TRIP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76107
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4333
MBD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82097
MFSD2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93614
496100611_FWM_no dementia_no TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.20136
RNF17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59291
YTHDF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77265
RECQL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64004
SWSAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87919
PMC8814143-41419_2022_4530_MOESM12_ESM.xlsx-up_ZNF32_vs_Vector-Unnamed_1_ZNF32	Rummagene Transcription Factor Associations 2026	1.0	null
ADAM8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17095
CIDEA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73519
PMC11166884-mmc4.xlsx-Table_S3-Table_S3_proinflammatory-EC2_comparison_between_WT_and_TG_TCF15	Rummagene Transcription Factor Associations 2026	1.0	null
SPEF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80881
PNPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68953
AIM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97073
STX16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.0023
RNF6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37225
VPS25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90708
AMER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18516
PMC10800016-table_s3_20230913_ddad186.xlsx-DUX4-aff_I-Unnamed_1_DUX4	Rummagene Transcription Factor Associations 2026	1.0	null
PTPRZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58808
RIMS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36719
BEX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21174
DPRX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58998
SLIRP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44164
MRPL34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.22921
PMC10011543-41419_2023_5707_MOESM4_ESM.xlsx-genes_with_unique_InDel-F5-Thygro-r__CIC-1n_h-r__CIC-2n_h-r_CIC	Rummagene Transcription Factor Associations 2026	1.0	null
CAPN7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5531
FAM167B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.50122
R3HDM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46643
SLC6A15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44948
MYBL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4275
MAP1LC3B2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.94001
496100484_FWM_no dementia_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.28798
POU6F1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.64516
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9943
SEC24D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.74631
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.327
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	204.156
MKS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31767
ZKSCAN8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60027
CDK10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03474
DISP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28511
SLAIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58844
HEXIM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56813
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.4469
PNN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61289
RPS4X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60627
DOK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54578
VPS13A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53843
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5443
EFR3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.53318
NLGN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65895
NUP85	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23425
CTTNBP2NL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0107
CD37	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77802
IFT80	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.42988
TBC1D13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41185
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_Jurkat_LPS_vs_DC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
PTK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38169
AKR1B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34854
ADAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.21504
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	69.2577
PGAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65908
DSCC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76809
PLPP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42503
LMX1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43894
CTAGE9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42332
TTC21B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.30677
Nr1h3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.211
C1orf74	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1143
PMC5687749-pone.0188272.s005.xlsx-Supplementary_Table_3-Supplementary_Table_3_Differentially_Expressed_Genes_in_Common_between_AFX_compared_to_both_Keratinocytes_and_Fibroblasts_FOXO4	Rummagene Transcription Factor Associations 2026	1.0	null
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.5435
LEMD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42314
PCDH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77052
HEY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4715
KIFC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.37164
ARHGEF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45699
POLE2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62631
LHX8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45208
PAK6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.91444
CELF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29759
NNAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82962
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.3585
UBR5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.15938
MAP1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92043
SDAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28705
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.114
RAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17238
PPCS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.89705
MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4794
NRL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11476
PRKAA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20151
KYAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.96098
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-version_2_4_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GLMP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.1701
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3664
HES2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.57
PMC4815041-NIHMS715090-supplement-Supplementary_Table_10.xlsx-CCF_DP_clustering-Hugo_Symbol_PITX1	Rummagene Transcription Factor Associations 2026	1.0	null
TAGLN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.64263
SIAH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56138
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6073
SEC11A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.11401
PPP1R1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19082
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.3967
CCDC184	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3152
POLR2C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45794
FDXACB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32837
NUDT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.94145
ERGIC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77213
PLXNB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92823
ZNF701	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63261
ZNF710	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41219
HES5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7313
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.5112
CHCHD10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45714
CDC25C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19913
FANCE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63727
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.4316
PNPLA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14675
TRPC4AP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2479
UCHL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91827
SIRT6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30091
GYG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83873
FOXA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.15006
DIS3L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50492
C6orf89	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38059
C1orf210	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45569
RTN4IP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88166
BICD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.96779
TOMM34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7393
MAPK9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63748
CAPZB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50344
VCX3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7785
H4C8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99858
VMA21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84069
VPS28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65873
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.8733
RAB9A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69167
NUP43	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65313
GCC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49307
MVB12A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40529
ERCC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12739
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2479
MTCL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91853
TTLL6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.81369
ERI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60162
ACBD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39347
LINGO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02378
MRPS27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06858
MYRF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33333
SHISA9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47705
PMC12152148-41420_2025_2541_MOESM3_ESM.xlsx-AR-IP-DHT_peak-gene-symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
SATB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.18576
PMC9541747-AGE-53-680-s003.xlsx-TableS6-Table_S6_Genes_with_missense_mutations_in_Yaroslavl_cattle_MAF_0_1_and_FST_0_4_in_the_1000_Bull_Genomes_Run_9_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
SUPV3L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24693
HUS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28316
HSD11B1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00463
PKMYT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19857
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.6123
MRPL19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11983
GTF2A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04013
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5438
BRF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23497
UNC13B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74371
SMPD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.69444
SELENOI	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.40714
SFPQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90006
SH3D19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3123
ZNF681	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25048
GLI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.8399
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8661
PIP5K1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.26818
AS3MT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76768
POU2F3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.24261
TMEM238	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85763
ZCCHC18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21933
CCNA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.74025
NFIC::TLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.25
COPS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9512
HIC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7271
METTL7A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95019
RAB25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65012
FUCA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75458
NKX2-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5702
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4306
VEGFA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41822
REX1BD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22738
RHNO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33069
PMC11058205-42003_2024_6202_MOESM5_ESM.xlsx-Data2c_CEBPA_ChIP-Unnamed_9_CEBPA	Rummagene Transcription Factor Associations 2026	1.0	null
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.2711
PDIA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57533
FAM124A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67868
KISS1R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06481
POU2AF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73155
PPP2R3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46901
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5861
RASSF10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01859
RAB8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40841
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.0789
RIMS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30722
PMC10248509-Data_Sheet_6.CSV--GSE58294_DE-genes_AND_GSE66724_DE-Genes_NOT_Autophagy_NOT_GSE22255_DE-Genes_NR4A2	Rummagene Transcription Factor Associations 2026	1.0	null
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.9237
SSNA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.11002
YME1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10654
PEX11B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5578
STPG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21659
PSMC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91674
CTDSPL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93333
TMEM131	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01689
496100577_FWM_probable Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.50369
MARCKS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27275
SOHLH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6361
GGN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49481
COQ10A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.26964
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0789
NFE2L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.44222
KIF14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.05257
GDF9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6957
PCYT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41208
IFI6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23465
DVL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.11516
496100608_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.00664
496100436_FWM_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.05047
RBBP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2074
PMC12120114-41525_2025_502_MOESM1_ESM.pdf-713-ENSG00000171634_BPTF	Rummagene Transcription Factor Associations 2026	1.0	null
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.5835
JPH4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.40401
HNRNPLL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.10607
RXRA::VDR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2
HELLS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6043
PMC11772884-41421_2024_747_MOESM6_ESM.xlsx-8_DEGs_RUNX1-OE_vs_control-Gene_Symbol_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
ATP6V1F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56232
CARMIL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05381
GLA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04828
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3275
SLITRK5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44741
DNAJA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83046
SCARA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37616
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.5268
KIF13A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.57144
RYR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41114
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.2946
NMB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95767
DDX41	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4417
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0958
TMEM14B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.77881
TDP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66024
SGF29	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36443
SKIC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08281
496100616_FWM_no dementia_TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.58387
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.1909
E2F8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31393
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2579
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.4074
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.85701
UBE4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6429
TEX10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04604
ACAD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4563
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.211
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9875
AURKC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49954
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4121
CR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62788
TBRG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63961
ORC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24865
HEY1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0394
RAB10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21832
BCS1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86374
P4HA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73074
HOXC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5436
SETDB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.55872
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.934
CRMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67092
PGK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77099
TADA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.62094
MARCHF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.98287
CLASRP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93361
SIX6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92357
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4007
RAB6D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30175
PORCN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02534
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2149
ZBED3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26123
496100317_FWM_no dementia_no TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.31745
CUL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51862
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3119
SNRPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3201
RHEB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.06381
ARRDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.16112
NPAS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.13431
GOLGA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.02584
GFM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94978
SOX14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7041
NDST1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15006
TTC31	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19004
496100277_FWM_no dementia_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.46581
GINS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83189
Gli2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3022
PMC11102563-41531_2024_715_MOESM1_ESM.pdf-36-ZNF790_ZNF790	Rummagene Transcription Factor Associations 2026	1.0	null
KLHL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87587
FAM193B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.34856
NMI	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28785
PABPC1L2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.15876
RFXANK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37208
PMC8995879-Table_1.xlsx-exome_variants_MAF_0_01-Gencode_34_hugoSymbol_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
CRISPLD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43111
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	110.295
GINS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22724
NEK9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69767
MARVELD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19434
POLR3H	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85153
RMDN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.80291
TP53I11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14143
RBM19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15643
PMC7997806-41397_2020_194_MOESM2_ESM.xlsx-MAGMA_GENE_SBP_AA-GENE_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
H3-3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00118
SELENOV	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8657
ZNF423	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21918
RILPL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25533
ARPC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60528
ZNF202	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48679
SCMH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01781
S100PBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24242
ATP1A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96586
INHA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63332
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.264
WNT5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00829
MNT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35743
Breast cancer	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.769897
CDX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3395
H2BC14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53913
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.7725
NUP58	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07763
PCDHB7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.78783
TAF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53726
ISX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.81371
ZDHHC17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9615
NATD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78399
CHST3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37654
H2AC8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07012
C1R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1182
ZFTRAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96174
ZC3H10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76665
DNAJC18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12683
SLC20A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15825
DENND10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2116
CCDC34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41519
SCG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67403
TEX261	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6908
BHLHE41	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14261
VPS16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04699
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4777
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	116.389
FOXP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.26343
MATR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7278
CSPG5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05001
CRIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19662
ZBTB11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69712
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.3526
OTUB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46241
MLF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86597
ZCCHC17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74024
PMC8528285-pbio.3001085.s010.xlsx-Fig_S7C-GENE_LIST_UPLOADED_TO_ENRICHR_MAX_KO_TESTES_627_GENES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
PAGR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95734
ERO1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.00039
CSTF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19146
CEP19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61051
NRARP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65155
LBX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36953
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6432
RAB4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60698
TRMT1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.0111
STAT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67922
PMC10016690-Table_3.xlsx-AKT1_vs_KLF4_deg_all-Unnamed_4_KLF4	Rummagene Transcription Factor Associations 2026	1.0	null
PSME3IP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.97219
DPH7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.44535
RPL22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92319
ASXL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37188
PYGO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15984
PMC8528285-pbio.3001085.s010.xlsx-Fig_7A-MAX_KO_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
SIGMAR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32873
PMC11426526-ppat.1012555.s011.xlsx-DEG_MDDC_Jurkat_LPS_vs_MDDC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
FKBP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01459
CCDC9B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95649
EMC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.2395
CYB5R1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26839
SRY	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.31332
IQGAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59793
MRPS28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30576
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2557
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_C91-PL_LPS_vs_DC_Jurkat-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF441	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54866
MMP23B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66683
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1141
SNAPC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52218
PABIR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.24214
ARNT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6013
NDUFB6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80207
PMC6855629-pone.0225186.s008.xlsx-Sheet1-DEGs_upregulated_in_SK-N-SH_MEIS1_OE_MEIS1	Rummagene Transcription Factor Associations 2026	1.0	null
HMGN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08779
DGKD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0668
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4019
TCF21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7414
UBE4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05267
PMC6639357-41467_2019_11150_MOESM4_ESM.xlsx-SupTab1_Activated_genes_diffex-Supplementary_Data_1_Fold_change_and_p-value_of_all_activated_protein_coding_genes_upon_DNMT1-KO_DNMT1	Rummagene Transcription Factor Associations 2026	1.0	null
PLD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04502
SF3A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00917
IFIT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15877
SH3BGRL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.29554
PMC7592539-12885_2020_7456_MOESM4_ESM.xlsx-Sup_TableS3_LMS_del_genes_conf-2q37_1_TP63	Rummagene Transcription Factor Associations 2026	1.0	null
KLHDC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13088
RPL8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40759
SYT12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.95235
GNB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93607
NKX2-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7086
GABARAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33492
CDH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32981
SLC27A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8402
CX3CL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00015
RB1CC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86846
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.706
OTX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9768
TNFRSF1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.14386
SHISA8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63724
SERINC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.181
PMC7335061-41467_2020_17150_MOESM4_ESM.xlsx-Table_S3-LIN28B_correlates_LIN28B	Rummagene Transcription Factor Associations 2026	1.0	null
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8323
CCDC115	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26906
ASCC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21263
PPP1R3F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09475
PCED1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70995
TRIM61	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38403
UBA52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03659
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.2071
ARRDC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69579
RNASEH2C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37473
PLEKHF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87806
FGF22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71699
PMC8528285-pbio.3001085.s010.xlsx-Fig_7G-MAX_KO_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
MYH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.16761
AP1S1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20651
ARPC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08953
RASSF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04097
FBXO48	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.08427
TXNDC17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80986
PMC12120114-41525_2025_502_MOESM1_ESM.pdf-713-BPTF_BPTF	Rummagene Transcription Factor Associations 2026	1.0	null
CHURC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65349
IER5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0834
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.4708
SLC39A7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03733
TMEM151A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26996
PMS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8474
NOL7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30881
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.0054
FAAH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20576
GALNS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23769
TXNDC11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.78441
AKAP8L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15527
496100562_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.50125
PARP12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94913
RIC8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28674
PFKP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42971
NDUFB7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47722
HSPB9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53726
ZDHHC16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54385
MIS12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57969
HES1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3886
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.1976
ZNF420	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.4021
WSB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0199
ETV5::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.0909
PGR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7008
CYTH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97257
RPL27A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14839
COQ10B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01904
MARCHF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58135
SLC2A8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8857
ZNF345	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.83371
SIN3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47431
PFDN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03715
EMX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.05728
TBC1D16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30654
496100514_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.32802
496100507_FWM_dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.23881
PAIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.69747
UAP1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58096
HELQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.03168
TBC1D10A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66846
MTIF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.91069
CHRDL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40773
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.634
496100559_FWM_no dementia_no TBI_87_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.42148
MCM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49789
TBC1D4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26818
PBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.0142
SSBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9576
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4014
SCARB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99134
PRRC2C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.81937
CBFB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01655
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5533
NKX3-1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.58826
TBL1XR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32086
H2BW2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19112
ACP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.06333
HSD17B4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.56283
PMC3046820-supp_db10-1270_DB101270SupplementaryData2.xls-Table_2S_Adioose_AA_vs_EA-Unnamed_1_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3793
Nr5a1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.0034
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8812
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.6633
BRIX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8403
YWHAQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1702
CDCA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39502
PMC11625982-AJH-100-10-s001.pdf-68-ZNF534_ZNF534	Rummagene Transcription Factor Associations 2026	1.0	null
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.653
HEBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31482
LAG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88305
KLRG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9212
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2091
TRIM41	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8349
ZNF638	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60949
CBX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0411
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.015
TFCP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.10801
KCNK5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87224
WARS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7417
GOLGA6L9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26668
VASH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.81614
SLC25A23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.58921
PMC10016690-Table_3.xlsx-AKT1_vs_KLF4_deg_all-Significant_DE_genes_in_AKT1_vs_KLF4_meningiomas_KLF4	Rummagene Transcription Factor Associations 2026	1.0	null
ZBTB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50475
LARP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28468
496100474_FWM_possible Alzheimer's disease_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.10869
OLFM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8066
CTSH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18169
MSS51	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72621
ESRRB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.52486
TMA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74786
PINK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46246
ERF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20724
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.688
CYP2R1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.29977
ALKAL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.84992
MYCN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.25429
HES1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12083
HIF1AN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14777
KDM4C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7052
PHF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.82433
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92201
PTRHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81116
ZNF700	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4173
496100532_FWM_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.08593
KIT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.97601
BNIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07189
PKD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11358
SLMAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30909
RAMP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21296
496100346_FWM_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.14368
ZNF614	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23718
TWF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.50391
GALE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50989
PMC9950457-mmc3.xlsx-GRHL2_binding_sites-RBBP8NL_GRHL2	Rummagene Transcription Factor Associations 2026	1.0	null
SOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.93629
GRK6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.36244
HSPA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69775
NR1I2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2714
ELOVL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96544
DPP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12565
CCNQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80697
TOR1AIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25874
SCRT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36154
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7222
TES	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16584
SF3B2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41556
EPB41L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70584
PSMD10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66364
STX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44238
Mean corpuscular hemoglobin	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.852288
KLHL34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94119
FMNL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.97636
RAB13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85126
RPL12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90445
RASSF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15223
IFIH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31526
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.4888
H3C10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01377
PRKAA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.64492
LRRC61	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9286
USP7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86281
SRSF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6937
DDI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04298
AXIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.39929
DERL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19376
VPS37A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35111
ATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.911
VWA5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21271
ERVMER34-1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.82378
MBD3L3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40746
IFT122	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81043
TOP2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35777
OGT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76851
PURA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2762
PMC10290283-biol-2022-0622-sm3.pdf-124-ZFP1_ZFP1	Rummagene Transcription Factor Associations 2026	1.0	null
AASDHPPT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5397
PMC9327205-11658_2022_358_MOESM7_ESM.xlsx-K562-BP1-Symbol_1_DLX4	Rummagene Transcription Factor Associations 2026	1.0	null
PMC5795782-supp_gad.302646.117_Supplemental_Table_S1.xlsx-Table_S1_2-Supplemental_Table_S1_2_Genes_significantly_upregulated_by_ARID5B_knockdown_ARID5B	Rummagene Transcription Factor Associations 2026	1.0	null
PLEKHM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52133
RALGPS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61236
ECE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.62606
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.5065
CERS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17536
WDR13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77845
DDX53	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.21093
TMEM167A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56988
ZNF703	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34724
SEMA4D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34241
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.86852
TMEM120A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11062
496100362_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.14498
CCNK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.74991
ZNF419	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47005
MNT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5837
Gli1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.9448
KCNK15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.97217
SEMA6B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46393
HNF4G	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30523
PTTG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30054
MARK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26855
COPS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00017
CORO2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.23119
FIGNL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.94237
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4541
TGFB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44254
EIF4E2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98274
ZNF543	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55973
FCHO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15277
LYRM7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.95925
RDH10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20876
NDUFB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32672
NDUFAF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63265
PPARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.0
TST	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67769
ZNF467	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65467
CLK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.1645
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1628
EPCAM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35332
FAM171A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69833
PMC5158030-pone.0168281.s004.xls-Sheet1-S3_Table_Genes_with_altered_methylation_and_expression_in_TET1_knockdown_Colo320DM_cells_TET1	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF860	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78424
OSR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1617
TDP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6685
EEIG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34861
SOX12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4855
MFN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29553
STK35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24159
TASOR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44223
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4663
GEN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.54516
ZKSCAN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52683
NAT9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87141
IGF2BP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14642
LIMK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.64428
KLK8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83768
HESX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02384
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4056
FOXI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.41143
ZSCAN5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2868
RRAGC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89136
LCMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63055
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3376
SSR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99906
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-Unnamed_60_AR	Rummagene Transcription Factor Associations 2026	1.0	null
FAM216A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95011
ARMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34111
FBXO11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30108
PLS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76835
SFMBT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.6442
AIMP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14429
GPR137	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.85382
DOCK6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41912
PMC11462941-CAS-115-2947-s001.pdf-150-LBX2-AS1_LBX2	Rummagene Transcription Factor Associations 2026	1.0	null
H3C7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19464
LRRC8D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43495
CCSAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75212
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7356
MEPCE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47188
MBD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04849
ANKRD35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33945
TMED8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98583
NSDHL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02573
NFKBIA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28047
RHOT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97539
ZFAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.99516
SCN4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.21655
PMC12381255-41389_2025_576_MOESM3_ESM.xlsx-Differentiated_SRCAP-1879-Gene_SRCAP	Rummagene Transcription Factor Associations 2026	1.0	null
PXMP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.74074
BAG5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.81439
TNK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.44576
ZNF829	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42624