association	dataset	threshold value	standardized value
HL-60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.65034
SJCRH30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.952298
NCI-H647	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
D-283MED	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
PANC-08-13	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
upstream	GeneRIF Biological Term Annotations	1.0	null
HCC1419	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
KYSE-50	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
transcribed	GeneRIF Biological Term Annotations	1.0	null
RCC10RGB	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
noncoding	GeneRIF Biological Term Annotations	1.0	null
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25595
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04781
JEKO-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30947
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.908112
HS 294T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04245
D-566MG	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17832
ISHIKAWA(HERAKLIO)02ER-	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
EB-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.20773
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04245
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.835577
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-1.24436
BHT-101	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
colon	GeneRIF Biological Term Annotations	1.0	null
specifically	GeneRIF Biological Term Annotations	1.0	null
COR-L23	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
CAL-39	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H1975	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40997
BFTC-905	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20791
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.985209
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58883
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.24884
OCI-LY-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.90407
JJN-3	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
TE-10	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
GR	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC-44	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H716	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
OE19	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
KPL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16289
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00765
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32729
AU565	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
SK-GT-2	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HD-MY-Z	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09046
NCI-H460	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11889
C170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.981411
esophagus	GTEx Tissue Gene Expression Profiles	1.0	1.35909
CAL-72	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.88286
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12671
KURAMOCHI	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04245
501A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01471
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42684
TC-71	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03354
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10283
23132/87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.925349
SAOS-2	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11803
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55223
GCIY	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
stomach	GTEx Tissue Gene Expression Profiles	1.0	0.901031
gastric	GeneRIF Biological Term Annotations	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80975
EW-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NOS-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30947
SW 527	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.59951
HGC-27	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
SW 480	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17832
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.99107
liver	GTEx Tissue Gene Expression Profiles	1.0	1.42915
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.79488
BV-173	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11803
locus	GeneRIF Biological Term Annotations	1.0	null
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50865
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.08985
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.64369
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
PSN1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
JURL-MK1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
CPC-N	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
CAL-120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850501
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11889
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45607
PU.1	MotifMap Predicted Transcription Factor Targets	1.0	null
blood vessel	GTEx Tissue Gene Expression Profiles	-1.0	-0.973734
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25907
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.86001
TE-9	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
STAT4	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05751
ZR-75-30	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
KYSE-450	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H1304	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
IST-SL2	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
SNU-423	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04245
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48049
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
C2BBE1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01407
HS-578-T	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H1781	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35682
LU-65	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
451LU	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.917402
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.13096
SK-OV-3	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11889
HS766T	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
ASH-3	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
SKM-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H82	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.58211
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.92495
NCI-H2171	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
colorectal	GeneRIF Biological Term Annotations	1.0	null
HCC2935	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.20694
NCI-H211	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H446	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
EFM-192A	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851906
SNU-61	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
myc	GeneRIF Biological Term Annotations	1.0	null
NCI-H2342	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
COLO-320-HSR	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.18249
SUM 159PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45512
NB12	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12226
PCI-15A	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H23	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
ccat1l	GeneRIF Biological Term Annotations	1.0	null
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.02081
promotes	GeneRIF Biological Term Annotations	1.0	null
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06771
NCI-H82	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HL-60	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877001
KYSE-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.837262
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.925275
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08534
HUP-T3	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
SK-N-DZ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10102
OVMIU	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HCC44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32079
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23717
TE-4	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
PL4	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
activated	GeneRIF Biological Term Annotations	1.0	null
metastases	GeneRIF Biological Term Annotations	1.0	null
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860264
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
MCF-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.878966
rna	GeneRIF Biological Term Annotations	1.0	null
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30869
TE-8	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
LC-2-AD	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
PXR (PXR:RXR)	MotifMap Predicted Transcription Factor Targets	1.0	null
SU-DHL-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.20639
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04245
MFM-223	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.835577
EB2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20508
OACP4C	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
MG-63	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
cancers	GeneRIF Biological Term Annotations	1.0	null
TMK-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.908112
HCC1428	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
SC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.925013
BC-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NB-4	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
PL18	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
cmyc	GeneRIF Biological Term Annotations	1.0	null
JHOS-3	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
BJAB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20138
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25907
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.921631
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37323
long	GeneRIF Biological Term Annotations	1.0	null
CAOV-4	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
NCI-H2087	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.92495
MEG-01	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
HCC1395	COSMIC Cell Line Gene CNV Profiles	1.0	2.0614
lncrna	GeneRIF Biological Term Annotations	1.0	null
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40155
ccat1	GeneRIF Biological Term Annotations	1.0	null
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33193
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46804
SK-OV-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.998712
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968044