association	dataset	threshold value	standardized value
cerebral hemisphere	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.52856
Immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.524
Bronchus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.332
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3725
Eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.909
Crus 2, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03874
contrary	GeneRIF Biological Term Annotations	1.0	null
NANOG-18347094-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Intestinal disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.595
polymorphism	GeneRIF Biological Term Annotations	1.0	null
Phrenic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.415
PMC10945549-elife-91472-supp1.xlsx-Table_S1_Fold_change-Supplementary_File_1_Fold_change_of_average_cytokine_level_in_LPS-treated_macrophage_compared_to_control_PBS-treated_macrophage_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Perilymphatic space	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.532
classi	GeneRIF Biological Term Annotations	1.0	null
leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.23176
Combined immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.116
Cerebellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.305
encephalomyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.692697
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157K_vs_MSX1-Gene_id_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
ENG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03256
superficial stratum of POH	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.30462
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.975449
GSE133213_10_v_3_znrf3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
protein binding	GO Molecular Function Annotations 2015	1.0	null
sweat gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.668029
POLR2A_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
brain cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070873
H3K9ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
growth factor receptor binding	GO Molecular Function Annotations 2025	1.0	null
MYSM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.15671
NKX2-6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09811
Insulin Resistance	DisGeNET Gene-Phenotype Associations	1.0	null
increased susceptibility to autoimmune disorder	MPO Gene-Phenotype Associations	1.0	null
memory	GeneRIF Biological Term Annotations	1.0	null
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.9175
cellular phenotype	MPO Gene-Phenotype Associations	1.0	null
Superior frontal gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.612
achromatopsia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.597571
Coronary Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.444
SCRN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.88138
Brain microvascular endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.745
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.899499
Colorectum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
MDAMB468	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.694087
PMC3334867__F5	PFOCR Pathway Figure Associations 2023	1.0	null
BICRA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49341
NRSN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07431
GSE157050,GSE157051_2_v_3_metformin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
interleukin-12 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.94
ZNF484	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49019
mononuclear phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.166706
Plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.444
BMMC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.07
MAML2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20531
CCNE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56578
spinalcordlower	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.23083
BMI1-23680149-NPCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Endophthalmitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.8
Pore complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.85
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TT-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
non-neuronal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.261
Diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.369
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.049525
Neuron projection	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
Hypothalamic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.752
stimulus	GeneRIF Biological Term Annotations	1.0	null
Conjunctiva	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.744
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.96
renal tubule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067916
retinal stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.748753
Obesity	DisGeNET Gene-Disease Associations	1.0	null
Nutritional optic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.175
germ layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.284253
Paraventricular nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.388
Lung squamous cell carcinoma_LUSC_TCGA-43-5670-11A-01R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Polyradiculoneuropathy, Chronic Inflammatory Demyelinating	DisGeNET Gene-Disease Associations	1.0	null
MYB-21317192-ERMYB-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
striatum_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.98671
Kidney renal papillary cell carcinoma_KIRP_TCGA-UN-AAZ9-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC3048914__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Plasmacytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.545
COLO783	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.03847
MRPL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5755
Necrosis	CTD Gene-Disease Associations	1.0	2.14358
abnormal nervous system development	MPO Gene-Phenotype Associations	1.0	null
SHLD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24847
Pharynx	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.42
Mucosa	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.34222
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2655
KPNA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10501
Sensory peripheral neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.53
Neovascular inflammatory vitreoretinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.71
Macroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.126
muscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.571884
huntingtons	GeneRIF Biological Term Annotations	1.0	null
Epithelial stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.098
synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.749546
requires	GeneRIF Biological Term Annotations	1.0	null
TOPORS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70566
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A3HQ-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A24C-01A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Depression	DisGeNET Gene-Phenotype Associations	1.0	null
Kidney failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.283
striatum_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.924439
TMSB4X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.83614
ADCYAP1R1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16251
NFATC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22192
Prostate adenocarcinoma_PRAD_TCGA-CH-5766-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H4K5ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
impact	GeneRIF Biological Term Annotations	1.0	null
CCNJL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52566
WM-266-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.971449
negative regulation of cell differentiation	GO Biological Process Annotations 2015	1.0	null
C11orf58	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12955
production	GeneRIF Biological Term Annotations	1.0	null
Activin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.626
GSE58724_1_v_0_oxymetholone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873227
Posterior chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.021
primary motor cortex (area M1, area 4)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.07582
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.20302
Thrombospondin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.574
allelic	GeneRIF Biological Term Annotations	1.0	null
RGPD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34455
SLC19A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.62875
Major depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.551
Arteriosclerotic cardiovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.479
Pituitary gland tumor cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.806
posterior (caudal) superior temporal cortex (area 22c)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.15283
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873227
brain cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.496483
Neuritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.583
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KCTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0813
PMC9013128-NIHMS1795992-supplement-6.xlsx-ARID2_MUT_Upregulated-Gene_name_ARID2	Rummagene Transcription Factor Associations 2026	1.0	null
PMC6151027-12864_2018_5080_MOESM6_ESM.xlsx-Synthesis_of_Lipid_215_AR-DEGs-Symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
spanning component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.157578
hsa-miR-4457	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Stromal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.905
alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.656046
Dermal fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.252
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.0195
multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.01976
bdnf	GeneRIF Biological Term Annotations	1.0	null
fat pad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.564434
PMC5742522-peerj-05-4214-s004.xlsx-Sheet1-Strabismic_medial_rectus_MR_vs_donor_MR_AND_strabismic_lateral_rectus_LR_vs_donor_LR_experiments_COMBINED_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.98939
SIN3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79896
GSE155695,GSE155696_1_v_0_acetaminophen_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
positive regulation of jak-stat cascade	GO Biological Process Annotations 2015	1.0	null
HID1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49674
496100316_TCx_no dementia_TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.66999
Germinal disc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.02
FOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2784
neural plate	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.185799
cytokine-mediated signaling pathway	GO Biological Process Annotations 2025	1.0	null
Lymphatic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.54
Fibrosis	CTD Gene-Disease Associations	1.0	1.47686
Large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.376
Stargardt disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.952
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MA-AA3Y-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Tight junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.779
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21181
Bladder Urothelial Carcinoma_BLCA_TCGA-CU-A0YN-01A-21R-A10U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-8114-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
astroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.297089
abnormal cell differentiation	MPO Gene-Phenotype Associations	1.0	null
compared	GeneRIF Biological Term Annotations	1.0	null
Photoreceptor Degeneration	DisGeNET Gene-Disease Associations	1.0	null
Hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.817
hair cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.313683
AQP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18579
Detrusor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.669
Frontotemporal dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.782
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.940689
interact	GeneRIF Biological Term Annotations	1.0	null
VAV2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45258
Carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.32
DEOC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	3.24385
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.548517
Fascia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.936
glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.497703
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.97889
Urinary tract infection	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.172
Axonal neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.074
Autosomal recessive distal hereditary motor neuronopathy 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.075
Inner plexiform layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.135
Hydrocephalus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.137
ventrolateral prefrontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.18351
fallopiantube_8d	HPA Tissue Sample Gene Expression Profiles	1.0	1.95826
SKMEL30	DepMap CRISPR Gene Dependency	1.0	2.11359
Scoliosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.211
Lung squamous cell carcinoma_LUSC_TCGA-22-1005-01A-01R-0692-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ATG9A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35346
POLR2A_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
meningitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.281153
CNTNAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44786
GSE235066_4_v_0_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
homozygous	GeneRIF Biological Term Annotations	1.0	null
Retinoblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.661
neural	GeneRIF Biological Term Annotations	1.0	null
anterior horn	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.928906
hESC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.021
CANX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12012
training	GeneRIF Biological Term Annotations	1.0	null
TMEFF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5636
epithelium	GeneRIF Biological Term Annotations	1.0	null
PITPNC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.887
immune system phenotype	MPO Gene-Phenotype Associations	1.0	null
HCC2157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.975015
non-neuronal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.20378
Knee	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.312
Riley-Day syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.022
Glia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.158
abnormal immune system cell morphology	MPO Gene-Phenotype Associations	1.0	null
NR1I3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75007
KCNIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.00526
TRAPPC12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29435
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.665
Sarcoma_SARC_TCGA-DX-A8BN-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inferolateral temporal cortex (area TEv, area 20)_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.56208
borderline glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.597181
Cold-Induced Sweating Syndrome	DisGeNET Gene-Disease Associations	1.0	null
astrocyte activation	GO Biological Process Annotations 2023	1.0	null
Raphe nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.164
amygdala	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.849104
Dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.383
MLH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72213
lateral SC part of the periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.16842
Astrocyte projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.955
DPF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68674
MITF-21258399-MELANOMA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Skeletal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.278
GSE226285_2_v_0_nr0b1_human	RummaGEO Gene Perturbation Signatures	1.0	null
aminoacyl-tRNA synthetase multienzyme complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.743
FOXD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0189
Hippocampus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
decreased oligodendrocyte progenitor number	MGI Mouse Phenotype Associations 2023	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A8AZ-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GNAQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4069
PANC0813	CCLE Cell Line Gene CNV Profiles	1.0	1.46737
autoimmune response	MPO Gene-Phenotype Associations	1.0	null
HNRNPM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44762
Embryonic neural stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.382
musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.443923
GSE224576_1_v_0_doxycycline_human	RummaGEO Drug Perturbation Signatures	1.0	null
bonemarrow_5a	HPA Tissue Sample Gene Expression Profiles	1.0	1.39253
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.631
EBC1	CCLE Cell Line Gene CNV Profiles	1.0	1.92293
QGP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.867451
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.33052
Umbilical cord blood cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.384
NAGS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80091
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AC-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POLR2AphosphoS2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GOSR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05725
lateral tuberal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.72976
bipolar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.830291
HDAC6	ENCODE Transcription Factor Targets	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.67256
FBXO22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6793
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6488-01A-12R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Testicular cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.096
POLR2AphosphoS2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Melanosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.918
SOWAHC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02011
VSIG10L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35089
Lens	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.617
Cerebellar Purkinje cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.536
H3K36me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Chronic kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.095
HRC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93944
cerebrospinal	GeneRIF Biological Term Annotations	1.0	null
cachexia	GeneRIF Biological Term Annotations	1.0	null
abnormal leukocyte morphology	MPO Gene-Phenotype Associations	1.0	null
JUP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68334
chromaffin cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.945226
PMC6523474__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Brain infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.53
PATZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60777
Hematopoietic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.501
olfactorybulb	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.916489
mantle zone of DgSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27154
Pancreatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.119
Germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.961
AARD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65091
ratio	GeneRIF Biological Term Annotations	1.0	null
Caudate putamen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.456
GLI3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42927
Encephalomalacia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.449
H3K36me3_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cerebral degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.093452
positive regulation of phosphorus metabolic process	GO Biological Process Annotations 2015	1.0	null
polymerase	GeneRIF Biological Term Annotations	1.0	null
autonomic nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.71078
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.6551
foot	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.598067
layer 3 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19046
Parasympathetic nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.337
multiple sclerosis	GAD Gene-Disease Associations	1.0	null
mouse	GeneRIF Biological Term Annotations	1.0	null
Morbid obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.209
Anteromedial nucleus, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.82669
release	GeneRIF Biological Term Annotations	1.0	null
endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
oligodendroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.67506
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.355
DNAJC30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.84704
retinoic	GeneRIF Biological Term Annotations	1.0	null
HELA	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	0.892885
Uterine endometrium	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
PMC5669621__F1	PFOCR Pathway Figure Associations 2023	1.0	null
smooth muscle	HPA Tissue Protein Expression Profiles	-1.0	-2.6928
PMC5336271__F4	PFOCR Pathway Figure Associations 2024	1.0	null
ACSM2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77365
Diabetic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.09
HDGFL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24286
CENPT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17561
Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41S-01A-12R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CCDC96	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.26992
BLCAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.8817
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.4069
Epithelioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.754
Supramolecular polymer	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.739
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5182-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ependymocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.608527
hippocampus (hippocampal formation)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.884638
Testicular Diseases	CTD Gene-Disease Associations	1.0	1.01512
ChIP_H3K36me3_18692474_mouseESC	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
ZFP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92246
Coronary artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.727
Proliferative Diabetic Retinopathy	DisGeNET Gene-Disease Associations	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.80134
EEIG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42982
improvement	GeneRIF Biological Term Annotations	1.0	null
ciliary neurotrophic factor-mediated signaling pathway	GO Biological Process Annotations 2025	1.0	null
SH-SY5Y cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.732
neuron projection	GO Cellular Component Annotations 2025	1.0	null
Ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.78
SAP30	ENCODE Transcription Factor Targets	1.0	null
salivarygland_6c	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.935597
GSE190322,GSE190324_3_v_4_rbm4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC7448569__F4	PFOCR Pathway Figure Associations 2024	1.0	null
ZNF235	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43123
leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076784
Cell Transformation, Neoplastic	CTD Gene-Disease Associations	1.0	1.19542
Chromaffin cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.527
glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.03
submedius thalamic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.36938
abnormal cell death	MPO Gene-Phenotype Associations	1.0	null
muscle phenotype	MPO Gene-Phenotype Associations	1.0	null
PNRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19149
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
Collagen network	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.67
Paranodal junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.019
Nerve plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.76
Alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.529
vitro	GeneRIF Biological Term Annotations	1.0	null
CoPV part of the periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.38498
bone marrow stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.389289
Somatic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.726
H3K36me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Neurofibroma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.502
mediodorsal nucleus of thalamus_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.22144
Pulp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.506
Perihypoglossal nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03768
EIF4EBP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94687
H3K4me3_Stomach Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SLC26A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05019
Cadmium Chloride	CTD Gene-Chemical Interactions	1.0	null
Motor cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.972
ZNF354A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7459
SU-DHL-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	2.13591
CNTFR	Pathway Commons Protein-Protein Interactions	1.0	null
cerebral lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.19756
primary visual cortex (striate cortex, area V1/17)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.879339
E2F1	ChEA Transcription Factor Targets	1.0	null
NS20Y cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.096
Neurofilament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.574
PPP1R3E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84351
CHD1	ChEA Transcription Factor Targets	1.0	null
confirm	GeneRIF Biological Term Annotations	1.0	null
Pseudopodium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.347
Autoimmune disease of gastrointestinal tract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
apee3	GeneRIF Biological Term Annotations	1.0	null
Vertebra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.434
Accessory facial motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.29573
TP63	ChEA Transcription Factor Targets	1.0	null
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_14_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.459751
Fetal Death	CTD Gene-Disease Associations	1.0	1.23552
KMT5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38019
liver	HPA Tissue Protein Expression Profiles	-1.0	-1.75646
retinopathy of prematurity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.485125
Neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.994
primary motor-sensory cortex (samples)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.4992
SEC31B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25044
substance-related disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.086
MESOV	DepMap CRISPR Gene Dependency	1.0	2.09926
Filopodium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.35
RHBDL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89598
Hyperplasia	CTD Gene-Disease Associations	1.0	1.43212
MIX23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66186
IRF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.4471
Sodium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.449
BHLHE22	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1556
EPHX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14487
Weight Gain	CTD Gene-Disease Associations	1.0	1.20394
H3K36me3_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Periventricular leukomalacia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.491
Supramolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.732
Ventral anterior-lateral complex of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4135
positive regulation of intracellular signal transduction	GO Biological Process Annotations 2015	1.0	null
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.3455
PMC8755441-mmc3.xlsx-IRF3-Up-Symbol_IRF3	Rummagene Transcription Factor Associations 2026	1.0	null
hsa-miR-4802-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A9DB-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Submedial nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.67393
Influenza	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.0
FBLIM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21975
sod1	GeneRIF Biological Term Annotations	1.0	null
CHD1-19587682-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
BNIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3401
ventrolateral preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.02414
positive regulation of macromolecule metabolic process	GO Biological Process Annotations 2023	1.0	null
HNRNPH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29038
Keratitis	DisGeNET Gene-Disease Associations	1.0	null
TCEAL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0146
Primary immunodeficiency disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.172
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5465-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
interleukin-12 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.77
Age Related Macular Degeneration	DisGeNET Gene-Disease Associations	1.0	null
dorsolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.900164
favourable	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
TDP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00016
ZNF391	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29373
negative regulation of neuron death	GO Biological Process Annotations 2015	1.0	null
BTBD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47552
Urinary Bladder Neoplasms	CTD Gene-Disease Associations	1.0	1.02077
Mature stage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.988
IMR-32 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.263
ptp1b	GeneRIF Biological Term Annotations	1.0	null
leg muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.788131
PMC4271569__F8	PFOCR Pathway Figure Associations 2024	1.0	null
HS 675.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.00093
PMC9378837-Table_3.xlsx-Venn_Diagram_Upstream_regulat-574_elements_included_exclusively_in_ESR2_Upstream_ESR2	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H1915	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.94666
abnormal mononuclear phagocyte morphology	MPO Gene-Phenotype Associations	1.0	null
photoreceptor	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.83785
medial ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.923791
Germ cell cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.119
cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.801564
STAT3-24763339-IMN-ESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.2259
seedling	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.383637
H3K9ac_Brain Substantia Nigra	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
fruit	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073142
Congenital Abnormalities	CTD Gene-Disease Associations	1.0	1.35242
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1568
Shoot	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.471
abnormal hematopoiesis	MPO Gene-Phenotype Associations	1.0	null
Anemia of prematurity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.091
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8997
frontalcortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.37926
macromolecular complex	GO Cellular Component Annotations 2015	1.0	null
chronic	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-452	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
body	GeneRIF Biological Term Annotations	1.0	null
sciatic nerve	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PYCR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65923
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.4859
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892377
GSE220520_3_v_9_ethanol_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Head	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.174
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6904
Severe combined immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.131
glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.946186
NSG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.29657
Autoimmune disease of cardiovascular system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.075
Bone resorption disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.542
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4970-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF516	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4524
Mueller cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.024
Paresis	DisGeNET Gene-Phenotype Associations	1.0	null
Dental pulp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.779
Bone marrow stromal stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.793
Liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.245
Node of Ranvier	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.572
abnormal neurite morphology	MPO Gene-Phenotype Associations	1.0	null
BICRAL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.27205
episupraoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.30234
BRL cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.584
gastrocnemius	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.626273
Neuronal ceroid lipofuscinosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.202
Striate cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.067
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A118-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.793
olfactory lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.14742
Keratoconjunctivitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.189
Caudate nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.051
positive regulation of tyrosine phosphorylation of STAT protein	GO Biological Process Annotations 2025	1.0	null
axon	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.27505
Oligodendrocytic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.348
Neuron projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.085
abnormal phagocyte morphology	MPO Gene-Phenotype Associations	1.0	null
growth factor activity	GO Molecular Function Annotations 2025	1.0	null
adrenal gland cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.191083
Globus pallidus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.042
PMC6151027-12864_2018_5080_MOESM3_ESM.xlsx-E18-D3_2440_AR-DEGs-Symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
brown adipose tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.65056
liver cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.280012
LIPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47235
SYT6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38077
enhanced	GeneRIF Biological Term Annotations	1.0	null
GSE171175,GSE171181_1_v_2_e7107_human	RummaGEO Drug Perturbation Signatures	1.0	null
Headache	CTD Gene-Disease Associations	1.0	1.12805
Bladder Urothelial Carcinoma_BLCA_TCGA-LT-A5Z6-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GJA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33669
HT1376	DepMap CRISPR Gene Dependency	1.0	2.51257
Atherosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.479
trigeminal	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
receptordependent	GeneRIF Biological Term Annotations	1.0	null
GR	MotifMap Predicted Transcription Factor Targets	1.0	null
Dorsal motor nucleus of the vagus nerve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.25894
Talus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.186
intracellular part	GO Cellular Component Annotations 2015	1.0	null
NCIH2073	CCLE Cell Line Gene CNV Profiles	-1.0	-1.96481
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.011
496100332_HIP_possible Alzheimer's disease_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.21757
regulation of multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
cancer	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.345945
Autoimmune disease of musculoskeletal system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.842
Amyotrophic lateral sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.74
retrotrapezoid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.60151
olfactory receptor neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.376494
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
abnormal glial cell physiology	MPO Gene-Phenotype Associations	1.0	null
KDM5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40401
Overweight	HuGE Navigator Gene-Phenotype Associations	1.0	null
ADD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3249
Lung adenocarcinoma_LUAD_TCGA-44-6147-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE124375_13_v_0_chd2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
extensor digitorum longus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.675765
Amblyopia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.113
ZNF479	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9709
Pericyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.871
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8551
positive regulation of tyrosine phosphorylation of stat3 protein	GO Biological Process Annotations 2015	1.0	null
GSE172247,GSE172250_0_v_2_mtor_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-4861-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Chondroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.87
Throat	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.037
Glucose intolerance	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.251
m1Lim (VL) part of the periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.49472
Immunosuppression	DisGeNET Gene-Disease Associations	1.0	null
Corneal neovascularization	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.168
open-angle glaucoma	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.303
REH	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SK-MES-1	GDSC Cell Line Gene Expression Profiles	1.0	2.67645
NODAL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71059
Diastolic blood pressure	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.552288
Foot muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.728
HCC-56	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MYB	ChEA Transcription Factor Targets	1.0	null
seed	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068134
H3K4me2_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
positive regulation of cellular process	GO Biological Process Annotations 2023	1.0	null
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8191
KLF5-20875108-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Inner ear disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.206
PMC2517789__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Rotenone	CTD Gene-Chemical Interactions	1.0	null
Atrophy	CTD Gene-Disease Associations	1.0	1.52212
PMC4032097__F9	PFOCR Pathway Figure Associations 2023	1.0	null
Spleen	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
SPCS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65845
19036130-TableS1a	GeneSigDB Published Gene Signatures	1.0	null
Retinal vein occlusion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.691
cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.04281
Lung adenocarcinoma_LUAD_TCGA-44-7669-01A-21R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
biological	GeneRIF Biological Term Annotations	1.0	null
heart muscle	HPA Tissue Gene Expression Profiles	1.0	0.848357
Primary somatosensory area, barrel field, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.29634
NCIH2004RT	DepMap CRISPR Gene Dependency	1.0	4.02688
bladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.077694
Memory Impairment	DisGeNET Gene-Phenotype Associations	1.0	null
POLR2A_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC4775036__F5	PFOCR Pathway Figure Associations 2023	1.0	null
BHK cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.137
Pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.342
PMC7382829__F6	PFOCR Pathway Figure Associations 2023	1.0	null
Duchenne muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.296
MYPOP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69663
H3K9ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Autoimmune disease of gastrointestinal tract	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.172
cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.65288
WM1799	DepMap CRISPR Gene Dependency	1.0	3.3637
Juvenile rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.332487
CAL-51	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Hippocampal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.742
RAB40C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93859
NEU	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.339
neural retina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.477756
PRRX2	JASPAR Predicted Transcription Factor Targets	1.0	null
Deutocerebrum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.401
MRNIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41711
Primary somatosensory area, barrel field, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.50302
Adrenocortical carcinoma_ACC_TCGA-PK-A5HB-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892377
AEBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82601
cassette	GeneRIF Biological Term Annotations	1.0	null
reference	GeneRIF Biological Term Annotations	1.0	null
spinal cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.17765
type iii intermediate filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.13881
Brain capillary endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.999
SMC1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88292
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064919
Nerve compression syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.212
ovary	HPA Tissue Gene Expression Profiles	-1.0	-0.96473
Glycogen Storage Disease	DisGeNET Gene-Disease Associations	1.0	null
GAS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31537
ovary	HPA Tissue Protein Expression Profiles	-1.0	-0.886615
primary visual cortex (striate cortex, area V1/17)_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.97091
motoneuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.33128
periventricular stratum of TG	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58909
extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.395485
vitreous chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.70886
Artery - Tibial	GTEx Tissue Gene Expression Profiles 2023	1.0	7.1969
Dynactin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.192
abnormality of the lung	GWASdb SNP-Phenotype Associations	1.0	0.11902
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3324-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
astroglial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.89513
Brain ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.461
Amniotic fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.417
Primary somatosensory area, trunk, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.35729
cell body	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.910182
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09459
C-fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.245
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3ML-06A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCEA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37284
496100470_HIP_possible Alzheimer's disease_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67612
CACNG8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50749
photoreceptors	GeneRIF Biological Term Annotations	1.0	null
Internal capsule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.229
496100368_PCx_probable Alzheimer's disease_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.66301
GSE235066_7_v_6_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HEY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75274
Amyotrophic Lateral Sclerosis	DisGeNET Gene-Disease Associations	1.0	null
DCUN1D3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.54025
ZDHHC20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94004
Glomerular layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.277
primary	GeneRIF Biological Term Annotations	1.0	null
p44p42	GeneRIF Biological Term Annotations	1.0	null
Pain agnosia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.461
gliosis	MPO Gene-Phenotype Associations	1.0	null
SLC52A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49491
mediodorsal nucleus of thalamus_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.18147
amyotrophic	GeneRIF Biological Term Annotations	1.0	null
cerebellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.770685
eating	GeneRIF Biological Term Annotations	1.0	null
KP3	DepMap CRISPR Gene Dependency	1.0	2.20638
ventral posteromedial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.45398
GSE150669_0_v_1_roxadustat_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
hsa-miR-1294	TargetScan Predicted Conserved microRNA Targets	1.0	0.632343
NAA35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52684
PMC5794831__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Pigmentary Disorder	DisGeNET Gene-Disease Associations	1.0	null
Myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.66
normal pressure hydrocephalus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.26514
cellular_component	COMPARTMENTS Experimental Protein Localization Evidence Scores	1.0	0.233497
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.56711
POLR2AphosphoS5_GM12892_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Impaired Cognition	DisGeNET Gene-Disease Associations	1.0	null
GATA3-26560356-CHIP-SEQ-TH1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
KCNN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96495
Bipolar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.3
receptor ligand activity	GO Molecular Function Annotations 2025	1.0	null
496100533_TCx_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67655
positive regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
PMC6798812__F11	PFOCR Pathway Figure Associations 2023	1.0	null
EEF2KMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40706
neuro2a	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.52962
survivalpromoting	GeneRIF Biological Term Annotations	1.0	null
COQ2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27846
A-Vietnam-1203_CIP048_RG3-2004(H5N1)PB1-F2del_2day-MOI-10^3_None_GSE43302	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.49059
characteristic	GeneRIF Biological Term Annotations	1.0	null
spinal column	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.507064
Stomach	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Neural ectoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.826
regulation of tyrosine phosphorylation of stat protein	GO Biological Process Annotations 2015	1.0	null
pc-12 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.520435
Esophagus	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-0.934219
STARD3NL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96181
intracellular	GeneRIF Biological Term Annotations	1.0	null
amnion epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214202
SLC35E3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3758
Cerebral infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.472
Occipital lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.792
b12	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.525
THAP11	ChEA Transcription Factor Targets	1.0	null
graft-versus-host disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.182
cntf	GeneRIF Biological Term Annotations	1.0	null
ACTG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23436
JUN-26020271-SMOOTH-MUSCLE-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Lewy body dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.167
IGR39	CCLE Cell Line Gene CNV Profiles	1.0	1.70152
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.487
JADE3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.95961
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1236
hsa-miR-3665	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
IL6ST	Pathway Commons Protein-Protein Interactions	1.0	null
Myelin sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.792
PAGE4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45006
CAMA1	DepMap CRISPR Gene Dependency	1.0	3.60001
PMC6117931-12864_2018_5033_MOESM3_ESM.xlsx-Fay_Heat_LPS-Gene_Symbol_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
lineagecommitted	GeneRIF Biological Term Annotations	1.0	null
MINK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61536
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21181
PMC3609811__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
MCF-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57178
pa317	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.545
abnormal response to injury	MPO Gene-Phenotype Associations	1.0	null
Crus 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.55623
Globe disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.798
mcf7	HPA Cell Line Gene Expression Profiles	-1.0	-1.24027
Cell body fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.92
Hindbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.366
Malaria	DisGeNET Gene-Disease Associations	1.0	null
APOE	Pathway Commons Protein-Protein Interactions	1.0	null
PMC4211625__F1	PFOCR Pathway Figure Associations 2023	1.0	null
GSE124932_2_v_1_sarm1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
IKZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0472
Meynert's basal nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.973
ciliary neurotrophic factor-mediated signaling pathway	GO Biological Process Annotations 2015	1.0	null
Nigrostriatal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.169
Cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.106
Cerebellar nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.828
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZZ-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.721
Dystroglycan complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.828
sympathetic chain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.03346
59M	DepMap CRISPR Gene Dependency	1.0	2.10663
Retinal pigment epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.359
NF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.86499
Aqueous Humor Disorders	DisGeNET Gene-Disease Associations	1.0	null
Cell body	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
retrohypothalamic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.00634
Skeletal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.536
Satellite glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.317
lateral septal nucleus, intermedio-intermediate part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05319
THAP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70616
Connexin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.954
Hyperglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.926
Uterine Carcinosarcoma_UCS_TCGA-N8-A56S-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
structure	GeneRIF Biological Term Annotations	1.0	null
Foot	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.261
BARHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2295
cranial nerve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.424765
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5975
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873227
HEG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90283
Arcuate hypothalamic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.45398
respiratory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.129031
Corticospinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.16
PYGO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71315
Median nucleus of thalamus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.385
Neuroepithelioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.755
disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.789262
EFR3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0619
ARID3A	JASPAR Predicted Transcription Factor Targets	1.0	null
Depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.168
primary visual cortex (striate cortex, area V1/17)_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.57327
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.30487
MGMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00767
NISCH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48623
Subparafascicular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.52652
ICA1	Pathway Commons Protein-Protein Interactions	1.0	null
Glutamate decarboxylase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.882
amygdaloid complex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.22618
GSE174522_1_v_0_spp1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Respiratory system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.287
Polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.406
receptors	GeneRIF Biological Term Annotations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-6873-01A-11R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCOA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5654
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.9555
bhk cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.520041
Liver hepatocellular carcinoma_LIHC_TCGA-ED-A7PX-01A-51R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GNL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51225
Distal axon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.573
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51E-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hindbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.830291
Lipopolysaccharides	CTD Gene-Chemical Interactions	1.0	null
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7332
positive regulation of response to external stimulus	GO Biological Process Annotations 2023	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6955-11A-01R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Telangiectasia	DisGeNET Gene-Disease Associations	1.0	null
chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.742976
Neuroblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.866
Myelin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.769
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Orbit	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.095
Rectum adenocarcinoma_READ_TCGA-EI-6917-01A-11R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SF-295 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.641
Cell leading edge	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.494
CREB3L4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39715
GSE239373_0_v_1_mettl3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
inflammatory	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.08456
Adult Glioblastoma	DisGeNET Gene-Disease Associations	1.0	null
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7695
SUM52PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.906948
COR-L311	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cysteine synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.643
PSMF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27159
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.69
Tenascin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.706
MTCL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91853
lung	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
interleukin-27 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.7
GSE121319_1_v_2_gprc5a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SMN complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.713
CCN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52076
negative regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
Schwann cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.867
MCF 10A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.98027
bonemarrow_6c	HPA Tissue Sample Gene Expression Profiles	1.0	1.3513
Fourth ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.839
GT1-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.564
GRAMD1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.73452
inferolateral temporal cortex (area TEv, area 20)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.22719
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.53615
FOXP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90057
RBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.11139
regulation of anatomical structure morphogenesis	GO Biological Process Annotations 2015	1.0	null
Bed nuclei of the stria terminalis	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03497
ige immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.158882
TSPOAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52812
dopamine	GeneRIF Biological Term Annotations	1.0	null
CMTR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52999
Vesicle	COMPARTMENTS Experimental Protein Localization Evidence Scores 2025	1.0	1.653
GSE188599_1_v_10_resolvin e1_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
MIO-M1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.558
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.776
related	GeneRIF Biological Term Annotations	1.0	null
Ciliary neurotrophic factor receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.912
HSF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3676
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.07594
STAT3-23295773-U87-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
retinal pigment epithelium cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.407073
neuron projection	GO Cellular Component Annotations 2023	1.0	null
Parallel fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.852
20460173-ImmPortComprehensiveListofImmune-RelatedGenes	GeneSigDB Published Gene Signatures	1.0	null
Sarcoma_SARC_TCGA-FX-A3TO-01A-11R-A22K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.984568
intermediate stratum of PalSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.06621
Nerve Degeneration	CTD Gene-Disease Associations	1.0	2.88009
H3K27ac_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
gonad	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
GSE196104,GSE196106_2_v_1_vsx2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
hsa-miR-3188	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
PMC5802197__F3	PFOCR Pathway Figure Associations 2024	1.0	null
HOXB8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74055
nervous system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Basal dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.54
Abnormal Behavior	DisGeNET Gene-Phenotype Associations	1.0	null
Umbilical cord blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.723
macular degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.607714
umbilical	GeneRIF Biological Term Annotations	1.0	null
brain	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
age	GeneRIF Biological Term Annotations	1.0	null
ORMDL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46607
TMEM131L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65995
Acute Myeloid Leukemia_LAML_TCGA-AB-2877-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC8779519__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Membrane attack complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.178
Inflammatory bowel disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.595
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.1633
H3K36me3_brain_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.978439
abnormal myelin sheath morphology	MPO Gene-Phenotype Associations	1.0	null
GABRB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52313
Subventricular zone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.449
PLS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8463
TAL1	ENCODE Transcription Factor Targets	1.0	null
Ion channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.848
FADS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72995
motor neuron disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.73322
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053895
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.840336
VHL	Pathway Commons Protein-Protein Interactions	1.0	null
Glial filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.061
sk-n-be(2)c cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.596862
Corpus callosum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.161
X-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.77
type	GeneRIF Biological Term Annotations	1.0	null
female reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.403
Subthalamic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.063
potentiates	GeneRIF Biological Term Annotations	1.0	null
Hydrogen Peroxide	CTD Gene-Chemical Interactions	1.0	null
Muscle Weakness	DisGeNET Gene-Phenotype Associations	1.0	null
Crus 2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09503
adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.73529
Amyotrophic lateral sclerosis type 4	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
E2F1-18555785-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
posteroventral (inferior) parietal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.860944
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12775
TSC22D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70989
Mesothelioma_MESO_TCGA-SH-A7BC-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
increased susceptibility to ischemic brain injury	MPO Gene-Phenotype Associations	1.0	null
erythroleukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.699444
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2731
primary motor cortex (area M1, area 4)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.07698
Leptomeninx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.147
nucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.928892
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8716
substance-related disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.062211
vdr	GeneRIF Biological Term Annotations	1.0	null
NCIH1650	CCLE Cell Line Gene CNV Profiles	1.0	1.37793
EBPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14117
terminal nucleus of the stria medullaris	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07388
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5469-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC8803621-mmc5.xlsx-54JIB-04genes_w_GATA4_motif-GATA4_Q3_GATA4	Rummagene Transcription Factor Associations 2026	1.0	null
19192944-TableS4	GeneSigDB Published Gene Signatures	1.0	null
QGP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66145
Nkx3-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.5673
abnormal nervous system morphology	MPO Gene-Phenotype Associations	1.0	null
Hereditary spastic paraplegia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.142
Neural plate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.597
IFT22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.90672
ventral tuberomammillary nucleus, superficial part (histaminergic)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.24136
positive regulation of peptidyl-tyrosine phosphorylation	GO Biological Process Annotations 2023	1.0	null
RT11284	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54675
neoplasm of the lung	GWASdb SNP-Phenotype Associations	1.0	0.438739
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.579
voltage-gated potassium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.321
HCC1937	DepMap CRISPR Gene Dependency	1.0	2.6032
Autonomic nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.26
glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.392686
GSE200673,GSE200691_1_v_0_hmga2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Neural lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.864
TFB2M	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82784
Eating disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
Neuroendocrine cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.454
496100586_HIP_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67712
Prostate adenocarcinoma_PRAD_TCGA-EJ-A46G-01A-31R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POLR2AphosphoS2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.049
H3K27ac_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PMC5543043-data_sheet_2.xlsx-LPS_MDM_module-Upstream_Regulator_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Vocal fold	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.004
GSE199899_4_v_2_diethylnitrosamine_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC6580171__F4	PFOCR Pathway Figure Associations 2023	1.0	null
intermediate filament cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.25022
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.026619
NMRK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62739
SLC39A7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03733
MET_knockout_261_GSE8747	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.62219
telencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.53286
Preosteoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.863
muscular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.36723
orbital frontal cortex_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.85207
immune	GAD High Level Gene-Disease Associations	1.0	0.305726
hindlimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.905404
SORL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5072
glial cell projection	GO Cellular Component Annotations 2025	1.0	null
Synaptic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.869
Presynaptic cytosol	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.719
PMC4596691__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Tooth	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.697
PMC4469332__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Fat pad	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.924
Breast Neoplasms	CTD Gene-Disease Associations	1.0	1.12564
hypoglossal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.56284
Lung adenocarcinoma_LUAD_TCGA-55-6985-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Microvessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.314
sympathetic nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.833223
Eukaryotic translation initiation factor 2B complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.085
ANAPC7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07755
primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.968363
NG2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.611
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.1552
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02622
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.192
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3451
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.467273
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
Rectum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
NANOG	ChEA Transcription Factor Targets	1.0	null
MACF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53115
mediodorsal nucleus of thalamus_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.44769
Catecholaminergic neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.906
disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.449947
portion	GeneRIF Biological Term Annotations	1.0	null
olfactory bulb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.14963
hsa-miR-548t	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
neuronal	GeneRIF Biological Term Annotations	1.0	null
neurodegeneration	MPO Gene-Phenotype Associations	1.0	null
H3K36me3_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
limb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.87782
Paraventricular nucleus of hypothalamus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.755
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.919665
Pineal gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.967
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.0526
496100603_PCx_probable Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67706
abnormal behavior	MPO Gene-Phenotype Associations	1.0	null
blood	GeneRIF Biological Term Annotations	1.0	null
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.27303
altered susceptibility to autoimmune disorder	MPO Gene-Phenotype Associations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-98-A53H-01A-12R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A85H-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
A172	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.19034
Transport vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.843
Fever	CTD Gene-Disease Associations	1.0	1.3036
Psoriasis vulgaris_Skin tissue_GSE14905	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.66904
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.257711
Brain Lower Grade Glioma_LGG_TCGA-HW-A5KM-01A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE140937,GSE140938_0_v_2_slfn11_human	RummaGEO Gene Perturbation Signatures	1.0	null
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.476
Sensory ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.027
PARP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56103
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GC-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ascorbic Acid	CTD Gene-Chemical Interactions	1.0	null
urinary tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.486716
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
temporal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.01768
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12351
Retinal vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.468
abnormal professional antigen presenting cell morphology	MPO Gene-Phenotype Associations	1.0	null
WWTR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19063
Chromosomal duplication syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.661
B cell deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.059
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
cytokine	GeneRIF Biological Term Annotations	1.0	null
PMC6718713__F1	PFOCR Pathway Figure Associations 2024	1.0	null
TRIM71	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16946
Activin AB complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.824
TM2D3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61813
decreased motor neuron number	MPO Gene-Phenotype Associations	1.0	null
Diencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.32
changes	GeneRIF Biological Term Annotations	1.0	null
parameters	GeneRIF Biological Term Annotations	1.0	null
SHH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52199
PMC5453624__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6GY-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
iloperidone	GeneRIF Biological Term Annotations	1.0	null
Activin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.812
GSE199606_3_v_0_ricin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Tendon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.555
male reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8572
Microvesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.482
glioblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.085711
NFIC	ENCODE Transcription Factor Targets	1.0	null
Thyroid gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
H3K79me2_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
lateral geniculate nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.500398
Stellate ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.095
c6 glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.447576
Craniofacial region	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.796
LPXN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04365
Blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.364
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949959
choroid plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.241285
occipital neocortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.859708
receptor binding	GO Molecular Function Annotations 2015	1.0	null
growth factor activity	GO Molecular Function Annotations 2023	1.0	null
thalamic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.468824
Neurodegenerative Diseases	CTD Gene-Disease Associations	1.0	1.09646
AMPA glutamate receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.508
ZNF334	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7893
DLD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63467
Entorhinal area, medial part, ventral zone, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.24402
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5107-01A-01R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE205070_2_v_9_mertk_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
FARAGE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.05893
H3K36me3_small intestine_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Fiber	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.438
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.07926
PMC5802197__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Bone remodeling disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.54
H3K36me3_kidney epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC5013636-ncomms12601-s5.xlsx-ETS2-Groups_ETS2	Rummagene Transcription Factor Associations 2026	1.0	null
monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.051531
ventral part of JcP	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.42018
PMC5742522-peerj-05-4214-s007.xlsx-Sheet1-Donor_medial_rectus_MR_vs_donor_lateral_rectus_LR_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.833222
regulation of jak-stat cascade	GO Biological Process Annotations 2015	1.0	null
496100412_FWM_possible Alzheimer's disease_TBI_87_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.14733
H3K4me1_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
biological regulation	GO Biological Process Annotations 2015	1.0	null
min-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.248361
Neostriatum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.582
TTC642	DepMap CRISPR Gene Dependency	1.0	4.19223
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.029
interleukin-6 receptor binding	GO Molecular Function Annotations 2025	1.0	null
ANKRD13D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33042
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21181
Superior colliculus, motor related, intermediate gray layer, sublayer b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23032
increased susceptibility to injury	MPO Gene-Phenotype Associations	1.0	null
Chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.2
SLAIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58844
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.9082
MLLT11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91003
negative regulation of cell death	GO Biological Process Annotations 2015	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5092-01A-01R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CRAMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57458
hypothalamic	GeneRIF Biological Term Annotations	1.0	null
fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.647721
familial	GeneRIF Biological Term Annotations	1.0	null
GSE101546_2_v_1_setdb1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
middle cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.377245
PMC8423434-mmc7.xlsx-SOX2_HENSM-Genes_n_2733_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
stromal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.388535
Umbilical cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.718
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
Hypertension	CTD Gene-Disease Associations	1.0	1.63294
ligands	GeneRIF Biological Term Annotations	1.0	null
PMC7738628__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4986-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Chromosome Aberrations	CTD Gene-Disease Associations	1.0	1.13963
SCAND1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29496
Central retinal artery occlusion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.321
Head	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
constitutive	GeneRIF Biological Term Annotations	1.0	null
Nascent polypeptide-associated complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.358
Neuropil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.402
better	GeneRIF Biological Term Annotations	1.0	null
PMC6266631__F6	PFOCR Pathway Figure Associations 2024	1.0	null
TMTC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07501
glial	GeneRIF Biological Term Annotations	1.0	null
parvicellular interstitial nucleus of the posterior commissure	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.34752
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.977771
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.824749
NUGC-3	GDSC Cell Line Gene Expression Profiles	-1.0	-1.51292
MAP1LC3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71337
medial tuberal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.32674
ns20y cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.795208
POLR2A_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Global Developmental Delay	DisGeNET Gene-Disease Associations	1.0	null
PMC3981547__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.729
Peripheral nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.712
negative regulation of developmental process	GO Biological Process Annotations 2015	1.0	null
Ventral nerve cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.995
inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-2.59807
16341039-TableS1	GeneSigDB Published Gene Signatures	1.0	null
alpha-motoneuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.963
intrinsic component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.12075
Heart disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.608
interleukin-4 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.605
u26684	HPA Cell Line Gene Expression Profiles	1.0	1.19597
sympathetic ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.995425
positive regulation of macromolecule biosynthetic process	GO Biological Process Annotations 2025	1.0	null
Motor neuron disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.792
HMGA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22656
Tear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.196
ZNF876P	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93129
Intraocular Pressure Disorder	DisGeNET Gene-Disease Associations	1.0	null
Tadpole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.765
Lymphoproliferative syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.253
microglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.849165
PMC9794594-DataSheet_1.xlsx-ST12-Unnamed_16_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
abnormality of the respiratory system	GWASdb SNP-Phenotype Associations	1.0	0.093063
Keratoconus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.221
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.82237
Diabetic polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.63
NCIH1915	CCLE Cell Line Gene CNV Profiles	1.0	2.22849
markedly	GeneRIF Biological Term Annotations	1.0	null
G22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.868984
Hypotension	CTD Gene-Disease Associations	1.0	1.40401
SIX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91708
Lung adenocarcinoma_LUAD_TCGA-86-8279-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OLIG2-26023283-AINV15-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
PTEN phosphatase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.675
Piriform-amygdalar area, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.5585
P63-26484246-CHIP-SEQ-KERATINOCYTES-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
reduces	GeneRIF Biological Term Annotations	1.0	null
JTC-27 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.674
similar	GeneRIF Biological Term Annotations	1.0	null
Plantaris muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.973
Secondary progressive multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.723
regulation of peptidyl-tyrosine phosphorylation	GO Biological Process Annotations 2015	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8Q9-01A-12R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
adipocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.552888
Meibomian gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.802
PMC5009750__F1	PFOCR Pathway Figure Associations 2024	1.0	null
CTBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44154
plasma membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.05235
primary auditory cortex (core)_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.84843
color blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.136597
PMC10742386-pnas.2311372120.sd05.xlsx-DLX3_ST-Gene_Symbol_DLX3	Rummagene Transcription Factor Associations 2026	1.0	null
immune system cancer	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.345945
periventricular stratum of r10Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.20847
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.934633
H3K4me2_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7705
NDUFB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97147
M1 melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.248
H3K36me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hippocampus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.04973
regulation of metabolic process	GO Biological Process Annotations 2015	1.0	null
PSMG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2836
ATXN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30338
ventral posterior parvicellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.13996
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.068
Neovascular glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.133
Medulla oblongata	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.975
Mesenchymal stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.268
osteoclastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.446422
Paraflocculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09439
Autistic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.651
Embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.551
TASOR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39955
KLRG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04204
Posterolateral visual area, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.77011
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CH-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PCED1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63295
diphtheria	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.263722
abnormal motor neuron morphology	MPO Gene-Phenotype Associations	1.0	null
Perikaryon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.126
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Lung adenocarcinoma_LUAD_TCGA-NJ-A55A-01A-11R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ciliary neurotrophic factor receptor binding	GO Molecular Function Annotations 2023	1.0	null
Eye disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.303
AADAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33298
posteroventral (inferior) parietal cortex_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.25
Anterior horn	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.266
Low tension glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.039
connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04148
present	GeneRIF Biological Term Annotations	1.0	null
GSE159937_2_v_0_tfcp2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Neurotoxicity Syndromes	CTD Gene-Disease Associations	1.0	1.84746
CHD1	ENCODE Transcription Factor Targets	1.0	null
Achromatopsia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.233
Bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.758
layer 1 of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.42494
Autosomal recessive distal hereditary motor neuronopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.115
FBXO34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85773
Developmental Delay (Disorder)	DisGeNET Gene-Phenotype Associations	1.0	null
element	GeneRIF Biological Term Annotations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4730-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.534
PWR-1E cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.843
Juvenile spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.08
STAT3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55882
Serum Ldl Cholesterol Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
cardiotrophinlike	GeneRIF Biological Term Annotations	1.0	null
Cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.43
fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214765
head	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
AR-27623747-22RV1-MOUSE-PROSTATE-CARCINOMA	ChEA Transcription Factor Targets 2022	1.0	null
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.28415
PMC6144698__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Endoplasmic reticulum-plasma membrane contact site	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.193
salivary gland	HPA Tissue Gene Expression Profiles	-1.0	-1.57185
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.13267
C15orf40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.13896
hsa-miR-548ac	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
H3K36me3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PIANP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.17717
MICOS13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90259
CENPB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87922
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02622
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.92655
flexor	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.555274
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25225
axon terminus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.450836
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40568
Neurilemoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.846
craniofacial region	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.439123
A-Vietnam-1203_CIP048_RG3-2004(H5N1)mutPB2-627E_3Hour_None_GSE43203	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.47525
PMC9974099-jci-133-147087-s013.xlsx-Receptor_GSC__ligand_GBM-Ligand_expressed_in_GBM_CAF_GSC	Rummagene Transcription Factor Associations 2026	1.0	null
MED26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.589
amacrine cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.600881
Presynaptic density	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.762
NUAK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60304
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.835059
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NF-01A-11R-A27V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.274
Lens epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.848
EFL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95468
Nkx2-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.8924
Brain Lower Grade Glioma_LGG_TCGA-S9-A7R2-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superficial stratum of r6BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.60299
abnormal nervous system physiology	MPO Gene-Phenotype Associations	1.0	null
Growth cone filopodium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.536
hsa-miR-323-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
subpretectal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58767
Neuroblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.679
Colitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.172
Germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.94
PMC9387164-Table_2.XLSX-Sheet1-CLOCK_CLOCK	Rummagene Transcription Factor Associations 2026	1.0	null
amnion epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.194255
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.24393
Astrocytoma	DisGeNET Gene-Disease Associations	1.0	null
neurons	GeneRIF Biological Term Annotations	1.0	null
motor unit response	GAD Gene-Disease Associations	1.0	null
positive regulation of cellular amine metabolic process	GO Biological Process Annotations 2015	1.0	null
Macular degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.546
Charcot-Marie-Tooth disease type 1A	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.806
STEAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10875
GPAT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59735
PMC6425072__F2	PFOCR Pathway Figure Associations 2023	1.0	null
dorsal thalamus_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.912788
Blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.698
growth	GO Biological Process Annotations 2015	1.0	null
Prediabetes syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.334
Background diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.163
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29449
tc96	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.05
psychiatric diseases	GAD Gene-Disease Associations	1.0	null
actn3	GeneRIF Biological Term Annotations	1.0	null
male reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Spinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.358
abnormal neuronal precursor cell number	MPO Gene-Phenotype Associations	1.0	null
TUBB2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88885
EEF1AKMT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.73797
gluteal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.276495
PMC7122459__F1	PFOCR Pathway Figure Associations 2023	1.0	null
QGP1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63347
lipoprotein	GeneRIF Biological Term Annotations	1.0	null
olfactory ensheathing cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00152
non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.434
r11 alar plate	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00356
neuromuscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.235616
Salivary gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9371
Prostate adenocarcinoma_PRAD_TCGA-EJ-A46H-01A-31R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
affect	GeneRIF Biological Term Annotations	1.0	null
plant embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071689
metabolic	GAD High Level Gene-Disease Associations	1.0	0.303208
played	GeneRIF Biological Term Annotations	1.0	null
negative regulation of photoreceptor cell differentiation	GO Biological Process Annotations 2015	1.0	null
Pituicyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.03
PMC7395311__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Cranial nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.989
H3K4me1_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
regulation of protein metabolic process	GO Biological Process Annotations 2015	1.0	null
transgenic	GeneRIF Biological Term Annotations	1.0	null
cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.344079
Peripheral vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.015
Dystonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.138
mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.146403
Vasculature	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.877
496100484_FWM_no dementia_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.04111
Cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.734
astrocytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.083011
Optic nerve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.519
MITF	ChEA Transcription Factor Targets	1.0	null
SUPT20H_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dedifferentiate	GeneRIF Biological Term Annotations	1.0	null
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
central nervous system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
INO80E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.97589
abnormal axon extension	MGI Mouse Phenotype Associations 2023	1.0	null
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.4518
intermediate stratum of APal	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.40347
Anaplasia	DisGeNET Gene-Disease Associations	1.0	null
PMC7888496__F4	PFOCR Pathway Figure Associations 2023	1.0	null
post-traumatic stress disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121
HCFC1	ChEA Transcription Factor Targets	1.0	null
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7045
RNPEP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79315
PMC9974099-jci-133-147087-s013.xlsx-Receptor_GBM__ligand_GSC-Unnamed_1_GSC	Rummagene Transcription Factor Associations 2026	1.0	null
PMC8421956__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Retinopathy of prematurity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.66
Lung adenocarcinoma_LUAD_TCGA-99-8025-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6855629-pone.0225186.s009.xlsx-Sheet1-DEGs_downregulated_in_HEK293_MEIS1_KO_MEIS1	Rummagene Transcription Factor Associations 2026	1.0	null
Encephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.463
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08289
AKNA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14372
hep-g2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.374618
GSE205021_3_v_2_fenofibrate_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE171311_0_v_1_ellagic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
fallopiantube_8c	HPA Tissue Sample Gene Expression Profiles	1.0	2.70325
receptor ligand activity	GO Molecular Function Annotations 2023	1.0	null
Chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.593
TAP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71659
leading	GeneRIF Biological Term Annotations	1.0	null
Arteriosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.499
Hypomyelinating leukodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.328
Laryngeal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.082
inflammation	GeneRIF Biological Term Annotations	1.0	null
Glioma	DisGeNET Gene-Disease Associations	1.0	null
previous	GeneRIF Biological Term Annotations	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13632
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3932
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.0953
Basal forebrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.871
cell periphery	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.313718
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.801562
PMC3480664__F1	PFOCR Pathway Figure Associations 2024	1.0	null
SOX10	JASPAR Predicted Transcription Factor Targets	1.0	null
SLC38A9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.54366
SEC23A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34995
ICMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12997
ADPRH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63399
hsa-miR-3944-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
GSE147893,GSE147897_2_v_1_rbm4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.67795
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1389
HCC1419	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
hippocampus (hippocampal formation)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.2142
Merocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.537
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.052502
C6 glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.273
ESX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64955
anterior pretectal nucleus, ventral core part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.69708
Micronuclei, Chromosome-Defective	CTD Gene-Disease Associations	1.0	1.54475
positive regulation of protein metabolic process	GO Biological Process Annotations 2015	1.0	null
Leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.495
SF172	Achilles Cell Line Gene Essentiality Profiles	1.0	1.17937
Temporal association areas, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04127
organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.429642
share	GeneRIF Biological Term Annotations	1.0	null
GSE143692_0_v_1_trim8_human	RummaGEO Gene Perturbation Signatures	1.0	null
Brain cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.593
Brain Lower Grade Glioma_LGG_TCGA-HT-7601-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Neuroepithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.968
Limbic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.699
cellular_component	GO Cellular Component Annotations 2015	1.0	null
GSE93674_2_v_0_ezh2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Autonomic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.216
peripheral nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.06424
Glioblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.559
Ventral tegmental nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23917
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.66438
Nervous system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.684
Brain stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.567
ILOPERIDONE	DGIdb Drug Targets 2026	1.0	5.88133
Fatty Liver	DisGeNET Gene-Disease Associations	1.0	null
negative regulation of neuron apoptotic process	GO Biological Process Annotations 2023	1.0	null
motor cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.471151
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3042
MUSTN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62247
bonemarrow_6a	HPA Tissue Sample Gene Expression Profiles	1.0	1.48837
Adductor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.824
GSE154464_1_v_2_cdk6_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Hypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.85
Choroid plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.662
PMC7122459__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-7645-01A-22R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KDELR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21423
Oligodendroglioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
PHF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19943
KLF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09207
Presubiculum, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.44558
Pluripotent stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.796
depression	GAD Gene-Disease Associations	1.0	null
TDRD10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69043
STK16	Pathway Commons Protein-Protein Interactions	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-4866-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
renal	GAD High Level Gene-Disease Associations	1.0	0.293278
STK38L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94178
respiratory system cancer	GWASdb SNP-Disease Associations	1.0	0.232369
Auditory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
BT-474	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873815
Respiratory system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
496100349_HIP_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67309
anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12981	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.20973
RDES	CCLE Cell Line Gene CNV Profiles	1.0	1.40625
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5458-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SET2	DepMap CRISPR Gene Dependency	1.0	4.48229
SARS-CoV MA15_Day1_None_GSE49262	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	0.927457
skeletal muscle	HPA Tissue Protein Expression Profiles	-1.0	-0.886615
gain	GeneRIF Biological Term Annotations	1.0	null
UTP20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96201
Diabetic macular edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.76
SKMEL28	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48604
Lens disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.036
Choroid plexus epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.849
Visual cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.777
growth factor activity	GO Molecular Function Annotations 2015	1.0	null
CD4_Memory_Primary_Cells	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	0.96272
H3K9ac_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RBBP5_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.627485
KBTBD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94541
visceral hump	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.157261
hsa-miR-3919	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
abnormal neuron number	MPO Gene-Phenotype Associations	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.2643
inhibitory	GeneRIF Biological Term Annotations	1.0	null
Schwann cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.766
neuroblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.22737
Y-79 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.718
Central nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.679
Postsynaptic specialization	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.311
psychotic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.547807
HTR1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71697
abnormal astrocyte morphology	MPO Gene-Phenotype Associations	1.0	null
axon part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.822206
regulation of cellular protein metabolic process	GO Biological Process Annotations 2015	1.0	null
GSE150072,GSE169209_4_v_11_qser1_human	RummaGEO Gene Perturbation Signatures	1.0	null
motor neuron degeneration	MGI Mouse Phenotype Associations 2023	1.0	null
Cornea	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.259
Rhomboid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.29153
CD4_Naive_Primary_Cells	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	0.890258
DBP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.262
Four-helical cytokine, core	InterPro Predicted Protein Domain Annotations	1.0	null
17660535-TableS4a	GeneSigDB Published Gene Signatures	1.0	null
ZNF423	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.83862
Axonal growth cone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.996
CGTHW1	CCLE Cell Line Gene CNV Profiles	1.0	2.11781
mapk	GeneRIF Biological Term Annotations	1.0	null
POLR2A_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
rods	GeneRIF Biological Term Annotations	1.0	null
ZNF550	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28461
chain	GeneRIF Biological Term Annotations	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A3CG-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOMER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96136
striatum_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	3.08463
PMC6425613__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Herpes simplex	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.213
PMC7072680__F1	PFOCR Pathway Figure Associations 2023	1.0	null
cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.326
Paraplegia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.546
Kidney Chromophobe_KICH_TCGA-KN-8428-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IRF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7852
membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.371982
Central nervous system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.377
Growth cone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.479
Calcium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.094
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.470375
KCNQ4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21059
schizophrenia	GeneRIF Biological Term Annotations	1.0	null
ZNF638	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55007
Autoimmune disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.172
cytokine-mediated signaling pathway	GO Biological Process Annotations 2023	1.0	null
SNX33	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93692
Neuroma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.915
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_15_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
SLC30A7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61338
Fibrinogen complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.989
Neurofibrillary tangle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.636
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3285
organ system cancer	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.345945
hypothalamus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.976749
POLR2AphosphoS2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SEPTIN8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.68569
PMC3269658__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Alzheimer disease specific cell type	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.735
Extensor digitorum longus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.33
reuniens nucleus, main part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.19315
Spinal cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.204
HT144SKINFV1	DepMap CRISPR Gene Dependency	1.0	6.74945
HMY1	DepMap CRISPR Gene Dependency	1.0	2.51126
PMC2613125__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Placenta	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.744
layer 3 of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0517
Vitreous chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.221
MPDU1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16912
Median eminence	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.852
TEAD1	JASPAR Predicted Transcription Factor Targets	1.0	null
RBM12B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71427
Gut wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.311
GRPEL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.96692
ZKSCAN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19318
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.2743
Proteinuria	CTD Gene-Disease Associations	1.0	1.8409
Renal pyramid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.757
embryonic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.541377
severity	GeneRIF Biological Term Annotations	1.0	null
Spiral organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.349
parvicellular (lateral) subparafascicular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.14451
Ventral posterior complex of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.25894
Acute Myeloid Leukemia_LAML_TCGA-AB-2848-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.42294
ML-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.664
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	2.27937
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.28615
TXNL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26147
GSE190186,GSE190188_0_v_10_apoe_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.218715
retains	GeneRIF Biological Term Annotations	1.0	null
esophagus_5a	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.980115
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36768
further	GeneRIF Biological Term Annotations	1.0	null
non-arteritic anterior ischemic optic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.608
myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.573439
AIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.06675
ALX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97056
HDAC5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77886
NFYA	JASPAR Predicted Transcription Factor Targets	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
Cation channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.842
PPAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45924
embryonal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.363347
Cerebellar granule cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.55
neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.6791
primary auditory cortex (core)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.60387
insulin-like growth factor binding protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.339
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.433
Memory Disorders	CTD Gene-Disease Associations	1.0	1.66382
biological_process	GO Biological Process Annotations 2015	1.0	null
phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.151779
trigeminal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.691676
Myelin sheath	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.869
Mesaxon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.951
PMC4255622__F1	PFOCR Pathway Figure Associations 2024	1.0	null
neural stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.51569
SPRED2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90627
myoblasts	GeneRIF Biological Term Annotations	1.0	null
Synaptic membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.459
GNA13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69803
RUNX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31283
PMC6444804__F2	PFOCR Pathway Figure Associations 2024	1.0	null
HELT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53669
MFE-280	GDSC Cell Line Gene Expression Profiles	-1.0	-1.61888
Sclera	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.999
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
GATA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1601
FAM162A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.11386
hsa-miR-146b-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
neuropoietin	GeneRIF Biological Term Annotations	1.0	null
CHP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32481
increase	GeneRIF Biological Term Annotations	1.0	null
Ommatidium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.634
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.07523
thigh	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.111353
ChIP_HCIF1_20581084	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
stem	GeneRIF Biological Term Annotations	1.0	null
Distal dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.95
neuroblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.713601
dedifferentiation	GeneRIF Biological Term Annotations	1.0	null
Retinal cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.116
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5087
pathways	GeneRIF Biological Term Annotations	1.0	null
Demyelinating disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.666
Cholinergic synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.034
PMC7849364-supp_gad.342378.120_Supplemental_Table_S4_.xlsx-Hoja1-Table_S4-_SIX2-associated_genes_identified_by_CUT_RUN_overlapping_with_differential_expression_by_SIX2_knockdown_SIX2	Rummagene Transcription Factor Associations 2026	1.0	null
e2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.695
SP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63992
GSE205070_2_v_5_mertk_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
EXOG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47601
METTL24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52162
RABAC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03396
central amygdaloid nucleus, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.40152
ALCAM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.662
Muscular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.492
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.20439
GSE234289_4_v_2_rfx6_human	RummaGEO Gene Perturbation Signatures	1.0	null
Glaucoma	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.303
Adrenocortical carcinoma_ACC_TCGA-OR-A5JM-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
brain	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PMC12824914-mmc1.xlsx-ST12-Unnamed_0_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
cerebellar purkinje cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.305361
Lateral ventricle	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
PMC11754605-41467_2025_56327_MOESM3_ESM.xlsx-R157K_vs_MSX1-Gene_name_MSX1	Rummagene Transcription Factor Associations 2026	1.0	null
CPHXL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57806
TRIT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50399
Small intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.3252
Choroid disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.831
Fatty Liver	CTD Gene-Disease Associations	1.0	1.50624
A498	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33041
RSBN1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47025
CELF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51352
single-organism developmental process	GO Biological Process Annotations 2015	1.0	null
PMC5019383__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Myelinating Schwann cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.01
pancreatic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066537
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.869151
FOXO1::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.9913
layer 1 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06661
GABA-A receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.091
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A54R-11A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
weight	GeneRIF Biological Term Annotations	1.0	null
PMC6262299__F2	PFOCR Pathway Figure Associations 2024	1.0	null
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
FOXO1::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.1161
gut wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.249653
CKAP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45398
Pituitary gland cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.799
Autism	DisGeNET Gene-Disease Associations	1.0	null
RAB3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58543
Cochlear ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.717
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5452-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE240439_1_v_2_decitabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Prp19 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.008
COL2A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34989
PMC9509360-41419_2022_5262_MOESM6_ESM.xlsx-Fig_2D_MSC_targeted_RNF4-Up_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
abnormal myelin sheath morphology	MGI Mouse Phenotype Associations 2023	1.0	null
GTEx Muscle 20-29 vs 60-69	GTEx Tissue-Specific Aging Signatures	-1.0	-16.7277
Globoid cell leukodystrophy disease specific cell type	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.921
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4729-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Soft body part	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.334
PMC6266631__F6	PFOCR Pathway Figure Associations 2023	1.0	null
Cranial nerve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.479
PMC11772884-41421_2024_747_MOESM6_ESM.xlsx-8_DEGs_RUNX1-OE_vs_control-Gene_Symbol_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
shsy5y	GeneRIF Biological Term Annotations	1.0	null
NT5C3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95497
endogenous	GeneRIF Biological Term Annotations	1.0	null
encephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.16933
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19F-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.7595
bone marrow	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.602088
Posterolateral visual area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.42283
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847041
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GR-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Neural tube	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.942
PPP2R2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16122
Corpus albicans	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.732
growth factor receptor binding	GO Molecular Function Annotations 2023	1.0	null
Retinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
Cell wall-bounded periplasmic space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.858
storage tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.228764
abnormal oligodendrocyte apoptosis	MGI Mouse Phenotype Associations 2023	1.0	null
Posterodorsal preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.44363
PMC7144542__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.881
charcotmarietooth	GeneRIF Biological Term Annotations	1.0	null
Twitch muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.032
muscle	GeneRIF Biological Term Annotations	1.0	null
Capsaicin	CTD Gene-Chemical Interactions	1.0	null
MPRIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38063
Hyperglycemia	DisGeNET Gene-Disease Associations	1.0	null
Multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.623
INSM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63333
Nonpigmented ciliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.98
hsa-miR-3153	TargetScan Predicted Conserved microRNA Targets	1.0	1.11641
inferolateral temporal cortex (area TEv, area 20)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.15484
DU4475	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81449
SRI	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41522
Periventricular zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3247
B3GAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07339
Skin Cutaneous Melanoma_SKCM_TCGA-RP-A694-06A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
skein-like inclusion	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.532
LDHB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.84392
TCEA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70216
Panuveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.171
Muscle stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.165
GSE172295_0_v_2_sh3gl1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Rectum adenocarcinoma_READ_TCGA-F5-6814-01A-31R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE200673,GSE200691_1_v_4_hmga2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Autoimmune disease of skin and connective tissue	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.335
Nerve sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.982
Ventral posteromedial nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33204
striatum_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.08986
cytoplasm	GO Cellular Component Annotations 2015	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A82C-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pancreatic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068018
21205295-TableS2	GeneSigDB Published Gene Signatures	1.0	null
EHMT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87654
degeneration of macula and posterior pole	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.566054
myelinating schwann cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.20689
regulation of protein phosphorylation	GO Biological Process Annotations 2015	1.0	null
661W cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.306
Nerve	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
abnormal macrophage morphology	MPO Gene-Phenotype Associations	1.0	null
Inhibitory synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.165
embryonic neural stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.198
corpus striatum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.19045
Periodontal ligament	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.132
periventricular stratum of m1Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4936
jak stat signaling pathway	KEGG Pathways	1.0	null
Retinal pigment epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.645
Main axon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.866
Kuhnt-Junius degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.301
Prostate adenocarcinoma_PRAD_TCGA-ZG-A8QX-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7523
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.911936
DPY19L4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53082
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.977771
neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.00119
Weight Gain	HuGE Navigator Gene-Phenotype Associations	1.0	null
brain	GeneRIF Biological Term Annotations	1.0	null
Integrin alpha7-beta1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.742
NKX2-2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12046
MLYCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70589
performance	GeneRIF Biological Term Annotations	1.0	null
positive regulation of axon regeneration	GO Biological Process Annotations 2025	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4725-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Multiple myeloma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.271
GARS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83865
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.364513
Nephritis	CTD Gene-Disease Associations	1.0	1.11707
modiolus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.644479
Mesenchymal stromal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.377
Cribriform plate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.887
STAT6	MotifMap Predicted Transcription Factor Targets	1.0	null
ARHGEF10L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9888
bone marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.171398
KPL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35572
psych	GAD High Level Gene-Disease Associations	1.0	0.305726
spinal root	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.692902
Epilepsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.029
adipose-derived stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.679
TXNRD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57442
PMC4522610__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Blastocyst	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.511
behavior/neurological phenotype	MPO Gene-Phenotype Associations	1.0	null
TAS2R5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88722
KIF17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44699
Sensory system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.303
Rectum adenocarcinoma_READ_TCGA-AF-2691-11A-01R-A32Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
infundibulum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.187406
Osteoporosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.543
Agnosia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.48
Ependymal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.098
PMC7216262__F3	PFOCR Pathway Figure Associations 2024	1.0	null
NRP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03155
BPH1	DepMap CRISPR Gene Dependency	1.0	5.29735
Cerebellar cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.14
PMC7072680__F1	PFOCR Pathway Figure Associations 2024	1.0	null
cytokine receptor binding	GO Molecular Function Annotations 2025	1.0	null
PRDM13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38787
H3K36me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sh-sy5y cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.788547
LLPH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60575
496100278_FWM_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.42213
Hereditary retinal dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.343
TM31	CCLE Cell Line Gene CNV Profiles	1.0	1.34705
ASTE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.57093
CSM14.1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.568
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.865316
FOXP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2612
henles loop	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.213833
subarachnoid space	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.655024
Human amniotic epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.774
Pneumonia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
Charcot-Marie-Tooth Disease	DisGeNET Gene-Disease Associations	1.0	null
SLFN11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.98406
7td1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.641
Growth factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.267
layer 2 of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.31369
NOP14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82855
MLH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41677
PTBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19911
RHOH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19432
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
ARPE-19 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.179
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.908
hsa-miR-1915	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
Cochlear duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.361
ALS2CL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71627
Dendritic spine	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.745
orbital frontal cortex_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.03087
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.6549
primary motor cortex (area M1, area 4)_19 yrs_F_12832	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.951312
FLI1::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.4171
snp	GeneRIF Biological Term Annotations	1.0	null
RSC96 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.017
hippocampus (hippocampal formation)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.03891
PTGES	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99797
Leg muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.976
Autonomic nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.919
cranium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.441042
Complement component C1q complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.68
CLDN34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16156
Bed nuclei of the stria terminalis, posterior division, transverse nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.8617
GBX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53496
positive regulation of cell population proliferation	GO Biological Process Annotations 2023	1.0	null
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.517
PMC9437808-mmc5.xlsx-Upstream_regulators-IPA_Upstream_regulator_analysis_genes_that_were_downregulated_in_the_cf-mRNA_of_AZD_treated_group_at_2-hour_post_LPS_time_point_were_used_as_inputs_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
endometrium_4b	HPA Tissue Sample Gene Expression Profiles	-1.0	-2.85836
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3X2-01A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6499311-supp_gr.243345.118_Supplemental_Table_S8.xlsx-S8B_Het1A-HNF4A_2d_5x_open-Gene_Name_HNF4A	Rummagene Transcription Factor Associations 2026	1.0	null
onset	GeneRIF Biological Term Annotations	1.0	null
GPR108	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.42444
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.14853
Intermediate filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.797
Multiple synapse bouton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.672
FLI1-21867929-CD8-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Medial septal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33115
schwann	GeneRIF Biological Term Annotations	1.0	null
ZEB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4742
Learning Disorders	CTD Gene-Disease Associations	1.0	1.65249
Spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.824
investigated	GeneRIF Biological Term Annotations	1.0	null
CTCF_02_185	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61123
Charcot-Marie-Tooth disease X-linked dominant 6	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
496100658_FWM_probable Alzheimer's disease_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.40579
PDE6B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48694
H3K36me3_splenic B cell_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Congenital nervous system abnormality	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.218
Bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.985
Parafoveal Telangiectasia	DisGeNET Gene-Disease Associations	1.0	null
H3K36me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
1-(5-Isoquinolinesulfonyl)-2-Methylpiperazine	CTD Gene-Chemical Interactions	1.0	null
GSE202434,GSE202438_7_v_11_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
heart	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.526744
Cortical amygdalar area, posterior part, lateral zone, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.06273
magnocellular (medial) subparafascicular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72634
PMC6566080__F9	PFOCR Pathway Figure Associations 2023	1.0	null
primary motor cortex (area M1, area 4)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.845769
Apical dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.868
BA-56-QV45_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	3.66331
LAMB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25125
Mitochondrial processing peptidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.47
Rubrospinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.709
Chondrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.622
496100616_FWM_no dementia_TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.58612
CYTH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25375
Ciliary body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.781
H2AFZ_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
positive regulation of signal transduction	GO Biological Process Annotations 2015	1.0	null
PMC7181582__F7	PFOCR Pathway Figure Associations 2024	1.0	null
nd7/23	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.112
NAPB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03538
interleukin-35 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.827
Spinal root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.656
Area postrema	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.828
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7091-11A-01R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
U343	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.42458
ZSCAN9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80728
neuroblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.0806
Medial septum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.173
Ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.634
Cerebral white matter	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.774
Tooth germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.775
abnormal oligodendrocyte physiology	MPO Gene-Phenotype Associations	1.0	null
MMP14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76019
H3K4me2_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CW-6088-11A-01R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Flocculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.28423
PMC4469332__F2	PFOCR Pathway Figure Associations 2024	1.0	null
ChIP_CHD1_19587682	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
myotube	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.7146
p2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.524
clone81	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.679
POU4F2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62541
Lewy body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.425
hiPSC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.935
Proximal dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.939
Cleft Palate	CTD Gene-Disease Associations	1.0	1.14438
myogenic	GeneRIF Biological Term Annotations	1.0	null
Gastrocnemius	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.784
PMEPA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66341
H3K36me3_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pheochromocytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.517284
Pterygium Of Conjunctiva And Cornea	DisGeNET Gene-Disease Associations	1.0	null
TESK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97193
Inner nuclear layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.363
PLOD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53387
posteroventral (inferior) parietal cortex_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.953852
PMC3691611__F7	PFOCR Pathway Figure Associations 2023	1.0	null
primary motor cortex (area M1, area 4)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.02928
Brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.662
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Bronchoalveolar system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
bone structure disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.105182
Inflammatory bowel disease	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.91549
comparison	GeneRIF Biological Term Annotations	1.0	null
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.797
cerebellar cortex_11 yrs_F_12289	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.89754
negative regulation of neuron apoptotic process	GO Biological Process Annotations 2025	1.0	null
interleukin-23 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.74
POLR2A_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TGBC1TKB	DepMap CRISPR Gene Dependency	1.0	4.67731
TONSL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93496
Cleft Lip	CTD Gene-Disease Associations	1.0	1.14302
normalvariation	GAD High Level Gene-Disease Associations	1.0	0.293278
Ulcerative colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.125
PIK3R3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05113
Sympathetic nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.814
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.316
WM1799	CCLE Cell Line Gene CNV Profiles	1.0	2.17375
SLC30A6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.43313
GSE136894_2_v_3_psen1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
lambdoid septal zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19175
Charcot-Marie-Tooth disease type 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.141
Parahippocampal gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.576
growth factor receptor binding	GO Molecular Function Annotations 2015	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.34656
SHPK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59092
PMC8017594-LSA-2019-00332_Table_S1_Table_12.xls-DCX-KD_LIS1-KD_DEGs-LIS1-KD_AR	Rummagene Transcription Factor Associations 2026	1.0	null
T3M5	DepMap CRISPR Gene Dependency	1.0	2.63884
dopaminergic neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.38665
hsa-miR-4662b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Nucleus of reunions	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24894
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.21031
Temporal association areas, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.28898
neuropathy	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_HL-60_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.08135
PMC5282447__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Cingulate gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.118
18786252-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Schizophrenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.924
TOMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55319
CG-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.379
MALT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17024
H3K4me1_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PMC3691611__F7	PFOCR Pathway Figure Associations 2024	1.0	null
Ventricular zone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.82
ganglion cell layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.9996
RASopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
learning disability	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.330295
496100498_PCx_dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67653
Weight Loss	HuGE Navigator Gene-Phenotype Associations	1.0	null
soft tissue	HPA Tissue Protein Expression Profiles	-1.0	-0.886615
negative regulation of neurogenesis	GO Biological Process Annotations 2015	1.0	null
Crus 1, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.44701
PMC6386537__F3	PFOCR Pathway Figure Associations 2024	1.0	null
NUDCD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.88885
AGPS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52159
cyclic-nucleotide phosphodiesterase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.904
immunocytochemical	GeneRIF Biological Term Annotations	1.0	null
PC-12 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.996
Lung	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
TE5	CCLE Cell Line Gene CNV Profiles	1.0	2.61722
Bone marrow cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
constitutes	GeneRIF Biological Term Annotations	1.0	null
Nerve cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.024
ACOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26849
Pallidum, caudal region	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0343
Retinal detachment	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.32
Olfactory placode	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.812
Decubitus ulcer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.12
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
bone marrow cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.744214
Hindlimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.198
diabetic polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.315366
H3K9ac_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
External carotid artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.011
MED13L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47573
Macular retinal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.995
Amyloid plaque	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.523
prion disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.195501
astrocytes	GeneRIF Biological Term Annotations	1.0	null
Osteocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.512
Progressive muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.293
H3K4me2_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	2.24522
posteroventral (inferior) parietal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.910598
SYT7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.83302
PMC7144542__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Plasmacytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.896
GSE205070_2_v_7_mertk_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.149
Accessory olfactory bulb	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1115
Leber congenital amaurosis 10	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
ciliary	GeneRIF Biological Term Annotations	1.0	null
FN3K	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64767
Pervasive developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.859
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
17823238-TableS4a	GeneSigDB Published Gene Signatures	1.0	null
RBFOX2_02_139	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60486
Brain microvascular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.915
Floor plate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.485
DLX5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34453
superficial stratum of THyB-I	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.35588
PLK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00114
positive regulation of cellular protein metabolic process	GO Biological Process Annotations 2015	1.0	null
Leukodystrophy disease specific cell type	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.921
Brain ventricle	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
MITF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.11217
Cerebellar ataxia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.378
Ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.573
YAPC	GDSC Cell Line Gene Expression Profiles	-1.0	-1.59998
root	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065606
Glucose Intolerance	CTD Gene-Disease Associations	1.0	1.17067
Skin Cutaneous Melanoma_SKCM_TCGA-GN-A26D-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
negative regulation of neuron apoptotic process	GO Biological Process Annotations 2015	1.0	null
PRDX5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72195
Scrapie	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.066
patterns	GeneRIF Biological Term Annotations	1.0	null
X-linked dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.251
conserved	GeneRIF Biological Term Annotations	1.0	null
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01846
B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.396
immature	GeneRIF Biological Term Annotations	1.0	null
PMC5794831__F1	PFOCR Pathway Figure Associations 2023	1.0	null
interleukin-6 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.165231
positive regulation of response to wounding	GO Biological Process Annotations 2023	1.0	null
Prefrontal cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.519
liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.417718
neoplasm by anatomical site	GWASdb SNP-Phenotype Associations	1.0	0.042971
Signaling by Interleukins	Reactome Pathways 2024	1.0	null
GSE202434,GSE202438_7_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Ensheathing process	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.073
PMC9996951-40659_2023_417_MOESM3_ESM.xlsx-Osteo_vs_MSC_Array2_hypo_er_txt-Upstream_NAME_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF365	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67613
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12351
Hamstring muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.28
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.95451
ZCCHC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85697
BACH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6649
Achromatopsia	DisGeNET Gene-Disease Associations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-5631-01A-01R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
regulation of neuron death	GO Biological Process Annotations 2015	1.0	null
Fascia dentata	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.957
primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.222822
FNDC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88077
C22orf15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7588
OTUD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.03718
H3K36me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal spinal cord grey matter morphology	MPO Gene-Phenotype Associations	1.0	null
Central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.149
PMC4255622__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.204
IGFBP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39662
GSE139992_1_v_0_mboat7_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PAX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.4884
increased cerebral infarct size	MGI Mouse Phenotype Associations 2023	1.0	null
Left middle cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.941
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.323
Prostate adenocarcinoma_PRAD_TCGA-ZG-A8QW-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Inflammatory cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.927
Granule cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.811
Brain endothelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.773
COVID-19	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.235
Brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.115
Extensor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.564
Human brain microvascular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.75
primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.840478
A-498	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36038
BCLAF1_02_142	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.65605
Inward rectifying potassium channel	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.053
positive regulation of biological process	GO Biological Process Annotations 2015	1.0	null
Subarachnoid space	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.146
STX10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01859
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.513
GALM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20911
neural tube	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.262986
Ciliary transition zone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.133
496100521_HIP_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.6761
Granule cell layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.477
Juxtaglomerular apparatus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.093
TP63-23658742-EP156T-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
CAKI-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.894134
PABPC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93199
Superior cervical ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.887
ERF::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3256
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6746
ELMO3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99015
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5971-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.806
leg	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.749166
optic	GeneRIF Biological Term Annotations	1.0	null
GJB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04732
cerebral cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.51902
PMC5742522-peerj-05-4214-s008.xlsx-Sheet1-Strabismic_lateral_rectus_LR_vs_strabismic_medial_rectus_MR_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
rn-46a cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.732677
ciliary neurotrophic factor receptor binding	GO Molecular Function Annotations 2025	1.0	null
Nerve trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.128
Acute closed-angle glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.317
H3K36me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
increased susceptibility to experimental autoimmune encephalomyelitis	MPO Gene-Phenotype Associations	1.0	null
Duodenum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
regulation of gene expression	GO Biological Process Annotations 2023	1.0	null
ETV5::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3297
SPAG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46281
cerebellar cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	2.9
ETV2::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9367
Hyperimmunoglobulin syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.29
GSE136894_1_v_3_psen1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
EFNA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83218
PLPP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73913
Immune System Diseases	CTD Gene-Disease Associations	1.0	1.13415
fat_a.V1	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.10517
496100483_FWM_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.33245
PMC4775036__F5	PFOCR Pathway Figure Associations 2024	1.0	null
retromer, cargo-selective complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.593
Skeletal muscle fiber	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.391
ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.79144
PMC10916124-12864_2024_10174_MOESM1_ESM.xlsx-Supplementary_Table_6-The_downstream_genes_targeted_by_FLI1_The_ligand_vs_receptor_pairs_genes_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
CHD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37094
Insulin-Like Growth Factor I Deficiency	DisGeNET Gene-Disease Associations	1.0	null
Ebolavirus(ZEBOV)_3day_PBMCs_rNAPc2treated_21987740_GSE24943	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	0.086415
r9 part of the inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.2985
XRCC6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77053
GSE113106_2_v_5_dnm2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
lateral spiriform nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04916
SUSD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.95858
TOP3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22237
DISP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28511
soleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.478923
SIAH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47984
timedependent	GeneRIF Biological Term Annotations	1.0	null
H2BW2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.15502
developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050439
ZNF385B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6281
Bag cell neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.519
Retinal ganglion cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.131
ACP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06333
assay	GeneRIF Biological Term Annotations	1.0	null
kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.441042
ZBTB45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17395
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.253
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4326-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Avian pallium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.505
negative regulation of cell development	GO Biological Process Annotations 2015	1.0	null
Cyst	DisGeNET Gene-Disease Associations	1.0	null
HCC1395	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.1712
Diabetes	DisGeNET Gene-Disease Associations	1.0	null
open-angle glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.298
ZNF345	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83371
MEF2A	JASPAR Predicted Transcription Factor Targets	1.0	null
regulation of neuron apoptotic process	GO Biological Process Annotations 2025	1.0	null
HCC44	Achilles Cell Line Gene Essentiality Profiles	1.0	1.3534
JUND-26020271-SMOOTH-MUSCLE-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
peripheral nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.94883
PMC5453624__F5	PFOCR Pathway Figure Associations 2024	1.0	null
small	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DB-5273-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27ac_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Ciliary neurotrophic factor, CNTF	InterPro Predicted Protein Domain Annotations	1.0	null
Auditory capsule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.546
Low Density Lipoprotein Cholesterol Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
leukemia	GeneRIF Biological Term Annotations	1.0	null
following	GeneRIF Biological Term Annotations	1.0	null
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.67
Pituitary gland tumor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.783
TASOR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44223
cranial nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.779816
inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.873893
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.87647
vestibular labyrinth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.446422
Glycogen granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.894
ventrolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.947788
Middle cervical ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.57
macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.667215
adipose-derived stromal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.754
cerebrospinal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.666402
posteromedial visual area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.5889
Dyslipidemias	CTD Gene-Disease Associations	1.0	1.11809
PMC7395311__F3	PFOCR Pathway Figure Associations 2024	1.0	null
absence	GeneRIF Biological Term Annotations	1.0	null
implicate	GeneRIF Biological Term Annotations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-06A-22R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lateral sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.389
GSE100528_1_v_0_mettl3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
seminal vesicle	HPA Tissue Protein Expression Profiles	-1.0	-0.886615
AtT-20 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.764
residues	GeneRIF Biological Term Annotations	1.0	null
Mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.186
Muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.505
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949959
interleukin-6 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.708
sites	GeneRIF Biological Term Annotations	1.0	null
astrocyte development	GO Biological Process Annotations 2025	1.0	null
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.295
GSE242049_1_v_0_glutathione_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-8512-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SLC39A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34239
GSE150669_2_v_1_roxadustat_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.94
Dentate granule cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.072
ARHGEF18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.13106
Toxic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.307
GSE158743_1_v_2_nfkbia_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ChIP_NANOG_18347094	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
Climbing fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.803
Bladder Urothelial Carcinoma_BLCA_TCGA-CU-A0YR-01A-12R-A10U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gluteal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.101
JAK-STAT signaling pathway	KEGG Pathways 2026	1.0	null
lowresistance	GeneRIF Biological Term Annotations	1.0	null
rpe	GeneRIF Biological Term Annotations	1.0	null
Myenteric plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.788
Glioblastoma	DisGeNET Gene-Disease Associations	1.0	null
SLC7A5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30726
PMC9437808-mmc3.xlsx-IPA_Upstream_regulators-IPA_Upstream_regulator_analysis_Up_regulated_genes_following_LPS_treatment_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
NEUROG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18125
Vasculitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.226
Primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.61
Connective tissue cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.103
neurodegenerative	GeneRIF Biological Term Annotations	1.0	null
Ventromedial hypothalamic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.733
SUPT20H	ENCODE Transcription Factor Targets	1.0	null
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45963
22RV1	DepMap CRISPR Gene Dependency	1.0	2.62322
LDB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27646
Diphtheria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.24
Pheochromocytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.997
H3K79me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
lung	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.981639
CZIB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46551
muscle tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.572662
TBC1D3K	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41112
SNU475	DepMap CRISPR Gene Dependency	1.0	3.43057
Teratocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.108
MRPS7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.73969
PMC8980946__F1	PFOCR Pathway Figure Associations 2024	1.0	null
EIF3E	Pathway Commons Protein-Protein Interactions	1.0	null
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.984
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.67547
bag cell neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.280717
Autoimmune uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.356
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.14215
H3K36me3_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Retinopathy Of Prematurity	DisGeNET Gene-Disease Associations	1.0	null
Retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.844
Adrenal gland cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.289
RNF214	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82647
WM983B	CCLE Cell Line Gene CNV Profiles	-1.0	-2.30361
Cadmium	CTD Gene-Chemical Interactions	1.0	null
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
HOXA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40803
Choroideremia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.879
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.41255
schizophrenia	GAD Gene-Disease Associations	1.0	null
b cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.109997
PHGDH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1751
periventricular stratum of m1AL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33115
M14	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EXD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08678
oxophenylarsine	CTD Gene-Chemical Interactions	1.0	null
Musculoskeletal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.164
Posterior parietal association areas	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0511
stomach_3b	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.892483
hematopoietic system phenotype	MPO Gene-Phenotype Associations	1.0	null
GSE125007,GSE125008_10_v_0_uhrf1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Integument	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
ATP5MC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88087
Pulmonary Edema	CTD Gene-Disease Associations	1.0	1.29256
Endocrine organ benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.42
DSTYK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23083
Cystoid macular edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.76
GSE128232,GSE128233_1_v_0_phf2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Hyperinsulinism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.316
interleukin-6 receptor binding	GO Molecular Function Annotations 2023	1.0	null
Telangiectasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.01
blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.596012
capacity	GeneRIF Biological Term Annotations	1.0	null
Central Neuroblastoma	DisGeNET Gene-Disease Associations	1.0	null
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Autoimmune disease of central nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.625
Bed nuclei of the stria terminalis, posterior division	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1879
glial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.537021
Obesity	HuGE Navigator Gene-Phenotype Associations	1.0	null
Primary somatosensory area, trunk, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.08804
positive regulation of cellular amino acid metabolic process	GO Biological Process Annotations 2015	1.0	null
Inclusion body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.614
intermediate filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.25075
Dorsal peduncular area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.15375
TMEM59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09076
Nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.954
Ectoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.133
SAMD14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23728
Artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.007
Septal area	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.521
LSG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44132
H9 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.638
axon	GO Cellular Component Annotations 2023	1.0	null
Anxiety disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.359
Nucleus pulposus cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
Punctate epithelial keratoconjunctivitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.351
Striatal neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.941
Lung adenocarcinoma_LUAD_TCGA-75-6207-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PPFIA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92597
C2C12 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.365
H3K4me3_GM12865_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
Insulin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.683
lateral ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.04269
organ system cancer	GWASdb SNP-Disease Associations	1.0	0.037522
LAMA84	Achilles Cell Line Gene Essentiality Profiles	1.0	1.23835
light	GeneRIF Biological Term Annotations	1.0	null
OC-314	GDSC Cell Line Gene Expression Profiles	-1.0	-2.08219
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.314091
Lateral loop	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.974
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64412
Oligodendrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.933
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
DBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3495
T-24	GDSC Cell Line Gene Expression Profiles	1.0	1.99468
Giant axon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.676
RAD23A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63294
layer 4 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02071
NOP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43024
Leptin Deficiency Or Dysfunction	DisGeNET Gene-Disease Associations	1.0	null
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9834
ciliary neurotrophic factor receptor binding	GO Molecular Function Annotations 2015	1.0	null
GSE159148_0_v_1_sdc1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
RND2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41517
H3K36me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.4069
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.78334
granule cell layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.561245
Delta-Notch Signaling Pathway(Mus musculus)	WikiPathways Pathways 2014	1.0	null
Extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.459
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.920771
TMEM41A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99052
positive regulation of protein modification process	GO Biological Process Annotations 2015	1.0	null
MT-ND4L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28111
artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047633
periosteum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.113179
Rectum adenocarcinoma_READ_TCGA-EI-6508-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
striatal neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.18779
Terminal bouton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.385
H3K4me1_lung_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-22-1016-01A-01R-0692-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
does	GeneRIF Biological Term Annotations	1.0	null
PMC10873402__F5	PFOCR Pathway Figure Associations 2024	1.0	null
cytokine receptor binding	GO Molecular Function Annotations 2015	1.0	null
olfactory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.364139
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062722
receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.17722
abnormal microglial cell morphology	MGI Mouse Phenotype Associations 2023	1.0	null
Allergic contact dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.134
primary motor cortex (area M1, area 4)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.844544
lateral septal nucleus, intermedio-dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04851
intermediate stratum of CoPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.73889
POLR2A_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pelvic	GeneRIF Biological Term Annotations	1.0	null
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.600881
pharmacogenomic	GAD High Level Gene-Disease Associations	1.0	0.293278
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A770-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1BI-01B-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K79me2_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Neurilemmoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.203
regulation of cell death	GO Biological Process Annotations 2015	1.0	null
BBIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83871
35 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.886
phototransduction	GeneRIF Biological Term Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-7123-11A-01R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6330335__F2	PFOCR Pathway Figure Associations 2023	1.0	null
site of polarized growth	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.403637
POLR2A	ENCODE Transcription Factor Targets	1.0	null
Midbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.336
Rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.789
Cerebellum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
HTRA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10193
PIFO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66907
MAVER1	DepMap CRISPR Gene Dependency	1.0	5.91836
hsa-miR-921	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Cerebral degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.889
Presynapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.297
first	GeneRIF Biological Term Annotations	1.0	null
SHISA8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99059
cell-cell junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.012
Neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.228
GSE226983_2_v_0_ddx5_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE142684_0_v_1_prdm16_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
integral component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.174087
PRPF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83739
Posterior parietal association areas, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.1425
Embryonal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.33
regulation of programmed cell death	GO Biological Process Annotations 2015	1.0	null
Krebs ascites cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.526
Dendritic spine neck	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.78
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.30487
Alexander disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.768
Brain cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.428
CEBPB	JASPAR Predicted Transcription Factor Targets	1.0	null
AC-76-JB92_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.36336
plumule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07402
BORCS8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25803
Optic cup	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.944
LEPROT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51776
Meningitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.25
Proliferative diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.614
MAP2K1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38778
Learning disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.055
TBC1D14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8319
Cuboid bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.703
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.288
496100380_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.18635
NR5A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67849
negative regulation of multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
reduced	GeneRIF Biological Term Annotations	1.0	null
NDUFA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5554
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.0
TMSB15A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01922
retinal degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.59653
PMC6615111__F3	PFOCR Pathway Figure Associations 2024	1.0	null
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4335
MTR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23855
PMC6566080__F9	PFOCR Pathway Figure Associations 2024	1.0	null
Temporal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.54
GSE93674_1_v_0_ezh2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
survival	GeneRIF Biological Term Annotations	1.0	null
G292CLONEA141B1	CCLE Cell Line Gene CNV Profiles	1.0	1.3863
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.297
Mental Disorders	HuGE Navigator Gene-Phenotype Associations	1.0	null
Outer nuclear layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.37
GSE184902_4_v_0_adiponectin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE227891_5_v_3_ethanol_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Retinal degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.906
Striatonigral neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.689
Dopaminergic neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.196
osteogenic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.117165
GSE226285_2_v_0_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
ABHD15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40333
respiratory mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.241746
Neck	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.037
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.19641
astrocytosis	MGI Mouse Phenotype Associations 2023	1.0	null
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.4417
supraoptic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.508242
Leber congenital amaurosis 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.476
Bed nuclei of the stria terminalis, anterior division, dorsomedial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.6088
Prostate adenocarcinoma_PRAD_TCGA-CH-5794-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neurological	GAD High Level Gene-Disease Associations	1.0	0.295739
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25081
Lung adenocarcinoma_LUAD_TCGA-L4-A4E5-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ventral nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00418
body mass	GAD Gene-Disease Associations	1.0	null
Arcuate nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.888
ventral part of PHyB	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.64706
outer plexiform layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.328994
GSE137653_4_v_0_siglecf_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ENTREP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44102
skeletal	GeneRIF Biological Term Annotations	1.0	null
sprout	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.728152
TXNDC9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41144
Systemic lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.181
GSE179002_2_v_1_caprin1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
progenitors	GeneRIF Biological Term Annotations	1.0	null
RTL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49487
several psychiatric disorders	GAD Gene-Disease Associations	1.0	null
SCLC-21H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.876657
Integrin alpha6-beta1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.957
retinal	GeneRIF Biological Term Annotations	1.0	null
positive regulation of response to stimulus	GO Biological Process Annotations 2015	1.0	null
NONO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79081
LRPPRC	Pathway Commons Protein-Protein Interactions	1.0	null
cc1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.858
NFKBIZ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55685
CASP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09465
Methylmercury Compounds	CTD Gene-Chemical Interactions	1.0	null
Parenchymal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.098
Glial cell projection	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
BLVRB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23234
peripheral neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.565666
subventricular	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08289
ENSA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95037
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.3333
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949959
Parataenial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.28266
Perturb_17609_OE_U2AF35_SRP116787	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	19.699
regulation of multicellular organismal development	GO Biological Process Annotations 2015	1.0	null
eye and adnexa disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.4022
SNU-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.996813
retinal cone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.507849
tr33b	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.573
sensory peripheral neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.489691
Ammonium Chloride	CTD Gene-Chemical Interactions	1.0	null
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.959
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8119
Brain Lower Grade Glioma_LGG_TCGA-S9-A7R7-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intracranial hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.135979
IMPDH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.84758
sporadic	GeneRIF Biological Term Annotations	1.0	null
JURKAT, CLONE E6-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.03195
SLC37A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34555
Multiple system atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.283
PMC12178829-mmc4.xlsx-Sheet_3-MEG3-KD_Down-ID_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Metencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.305
positive regulation of nitrogen compound metabolic process	GO Biological Process Annotations 2015	1.0	null
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04133
abnormal cns glial cell morphology	MPO Gene-Phenotype Associations	1.0	null
Vibrissa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.665
Photoreceptor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.831
pancreas_6a	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.867306
Leading edge membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.588
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.00772
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.73526
Cataract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.036
PMC5019383__F3	PFOCR Pathway Figure Associations 2023	1.0	null
periventricular stratum of CoPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.38593
alpha	GeneRIF Biological Term Annotations	1.0	null
Cell body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.772
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.956122
periventricular stratum of r2BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1777
Retinal Fibrosis	DisGeNET Gene-Disease Associations	1.0	null
Cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.843
Lung squamous cell carcinoma_LUSC_TCGA-39-5028-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
gp130	GeneRIF Biological Term Annotations	1.0	null
cell surface receptor signaling pathway via STAT	GO Biological Process Annotations 2025	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A41A-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posteromedial visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.42354
UCK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27677
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A3XE-01A-12R-A239-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4959-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Internode	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.47
REC8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44758
Vein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.275
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.042
proteinaceous extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.248216
decreased grip strength	MPO Gene-Phenotype Associations	1.0	null
Posterior uveitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.272
PIGU	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48871
inner plexiform layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.588031
Schizophrenic Psychology	HuGE Navigator Gene-Phenotype Associations	1.0	null
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.82613
ZNF566	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4686
striatal	GeneRIF Biological Term Annotations	1.0	null
CTBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3041
subventricular zone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.996731
GSE107854_2_v_0_prmt5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Cornu ammonis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.0
Cerebrospinal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.135
Temporal association areas	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0517
SNX11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76945
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57428
Cell junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.668
bone mineral density	GAD Gene-Disease Associations	1.0	null
H3C12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23482
Corneal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.415
KSR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36967
COA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04559
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.624
skeletalmuscle_a	HPA Tissue Sample Gene Expression Profiles	1.0	0.966962
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
modified	GeneRIF Biological Term Annotations	1.0	null
bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.518859
Brain ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.174
HSF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86488
TSC1-TSC2 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.362
Oligodendrocyte specification and differentiation leading to myelin components for CNS	WikiPathways Pathways 2024	1.0	null
LTB4R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75568
Hyperemia	CTD Gene-Disease Associations	1.0	1.12564
nucleus incertus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02332
crlf-clcf1 complex	GO Cellular Component Annotations 2015	1.0	null
Type III intermediate filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.691
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2911
DZIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83222
Subcutaneous tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.909
CHPF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76109
morphine dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.172291
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.3832
H3K4me3_GM06990_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
Autoimmune optic neuritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.626
A4 noradrenergic cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.29641
SKMEL2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67393
CRYGD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59063
inner ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.454898
Lysosomal storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.593
Tear gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.752
ZNF624	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76894
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GU-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE95386_0_v_1_trim24_human	RummaGEO Gene Perturbation Signatures	-1.0	null
496100306_FWM_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67604
organ morphogenesis	GO Biological Process Annotations 2015	1.0	null
Childhood Leukemia	DisGeNET Gene-Disease Associations	1.0	null
Amacrine cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.248
Neuroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.04
CERS6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2097
PMC4370699__F5	PFOCR Pathway Figure Associations 2023	1.0	null
abnormal immune system physiology	MPO Gene-Phenotype Associations	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RT-A6Y9-01A-12R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PHIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27313
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.61
Mitral cell layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.697
primary auditory cortex (core)_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.98085
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2313
NUTM2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9786
pigment	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mueller cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.866842
EDEM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36973
NLN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63227
Myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.041
Periosteum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.806
Needle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.036
Retinitis pigmentosa	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.675
NCIH650	CCLE Cell Line Gene CNV Profiles	1.0	1.42486
SIM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40425
Female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.128
Glial cytoplasmic inclusion	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.757
neurofilament	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.916243
Circumventricular organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.762
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4338-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ige b cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.184547
HECTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94301
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Olfactory lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.436
Site of polarized growth	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.449
Type 1 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
Overview of proinflammatory and profibrotic mediators	WikiPathways Pathways 2024	1.0	null
CCDC186	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6349
Plasma membrane bounded cell projection cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.461
icSARA deltaORF6_7Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.92266
Scolopidium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.298
frontal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00109
GSE171837_3_v_1_bortezomib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Preoptic area	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.447
Olfactory receptor neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.439
IL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08707
Frontal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.38
regulation of signal transduction	GO Biological Process Annotations 2015	1.0	null
Cardiovascular Diseases	HuGE Navigator Gene-Phenotype Associations	1.0	null
Kidney Failure, Chronic	HuGE Navigator Gene-Phenotype Associations	1.0	null
PMC6704489__F3	PFOCR Pathway Figure Associations 2024	1.0	null
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892377
TNS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74201
umbilicalcord	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.11147
salivarygland_6b	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.6957
abnormal astrocyte physiology	MPO Gene-Phenotype Associations	1.0	null
TE11	CCLE Cell Line Gene CNV Profiles	1.0	1.75385
mice	GeneRIF Biological Term Annotations	1.0	null
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.890927
NALM16	DepMap CRISPR Gene Dependency	1.0	4.25475
GSE215086_3_v_0_batf_human	RummaGEO Gene Perturbation Signatures	-1.0	null
assessed	GeneRIF Biological Term Annotations	1.0	null
Stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.009
Muscle tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.052
Heterochromatin domain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.347
FOXO1::ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.4527
Diabetes Mellitus	DisGeNET Gene-Disease Associations	1.0	null
Inner ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.642
NIPAL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86076
SHOC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15622
H3K36me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
diagonal part of septum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27074
EFO-21	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mantle zone of THyB-V	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.23203
EXT1	Pathway Commons Protein-Protein Interactions	1.0	null
molecular	GeneRIF Biological Term Annotations	1.0	null
Kennedy's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.429
granule cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.299242
PMC6899527__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Perivascular astrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.089
TNRC6A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22434
anteroventral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00668
carbohydrate metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.497703
parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.392309
Brachial plexus lesion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
Parasubiculum, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.60755
TEX19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19889
Lassa Fever Virus_4hr_24069471_GSE41300	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.00738
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.8658
H3C14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50218
divergent	GeneRIF Biological Term Annotations	1.0	null
astrocyte activation	GO Biological Process Annotations 2025	1.0	null
RNASE11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27825
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30394
CTIP_DN.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
Blood platelet disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.1
Dendritic lamellar body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.763
FRK	MSigDB Cancer Gene Co-expression Modules	1.0	null
underlying	GeneRIF Biological Term Annotations	1.0	null
myoblast	GeneRIF Biological Term Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A3RC-01A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU1327	DepMap CRISPR Gene Dependency	1.0	5.55476
Mucopolysaccharidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.099
Crus 1, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.66326
fusion	GeneRIF Biological Term Annotations	1.0	null
GATA6-21074721-CACO-2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Autoimmune disease of endocrine system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.24
inner nuclear layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.993249
phrenic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.520435
Lymph node	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.10966
TUSC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53095
IL-6-type cytokine receptor ligand interactions	Reactome Pathways 2024	1.0	null
POU6F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6962
cochlea	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.482817
neuron degeneration	MPO Gene-Phenotype Associations	1.0	null
Teratogenesis	CTD Gene-Disease Associations	1.0	1.14336
Nasal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.764
MACROH2A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45983
Brain edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.428
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
T98G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.869611
FEZF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52078
H3K36me3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Gap junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.703
SOX15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46864
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6148
Leukoencephalopathy with vanishing white matter	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.075
HS695T	DepMap CRISPR Gene Dependency	1.0	4.3873
PANK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36006
PMC3070659__F1	PFOCR Pathway Figure Associations 2023	1.0	null
women	GeneRIF Biological Term Annotations	1.0	null
HCC1937	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.888542
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MQ-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Systolic blood pressure	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.3
PI4K2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66906
Hyperkinesis	CTD Gene-Disease Associations	1.0	1.01174
POLR2AphosphoS5_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PBX1-22567123-OVCAR3-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
superficial stratum of r9BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.29918
PSIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90579
Attention deficit hyperactivity disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
Temporal lobe epilepsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.346
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6855
used	GeneRIF Biological Term Annotations	1.0	null
Retinal ganglion cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.945
amyotrophic lateral sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.69542
Hippocampus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.547
EXOC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94216
Amoeboid microglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.984
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4386
Ansiform lobule	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.36078
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.457987
Pigmented ciliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.823
demyelinating polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.303059
Prostate adenocarcinoma_PRAD_TCGA-EJ-7315-01A-31R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Steatohepatitis	DisGeNET Gene-Disease Associations	1.0	null
Cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.519
BCL7B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58
SIKE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67664
Chiasma	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.113
C1QL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21239
Corneal dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.23
Posterolateral visual area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.35511
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.6537
15771776-Table1	GeneSigDB Published Gene Signatures	1.0	null
targeting	GeneRIF Biological Term Annotations	1.0	null
ZNF454	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22296
Motor Neuron Atrophy	DisGeNET Gene-Disease Associations	1.0	null
Hearing Loss	CTD Gene-Disease Associations	1.0	1.10069
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.948239
PMC7568652__F4	PFOCR Pathway Figure Associations 2024	1.0	null
NCI-H1650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83383
studies	GeneRIF Biological Term Annotations	1.0	null
ZNF311	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98915
PMC5774508__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7238-11A-01R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mediodorsal nucleus of thalamus_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.0321
neuron projection terminus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.134303
neuromuscular junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.852961
positive regulation of tyrosine phosphorylation of STAT protein	GO Biological Process Annotations 2023	1.0	null
Primary open angle glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.171
abnormal mononuclear cell morphology	MPO Gene-Phenotype Associations	1.0	null
STAT1-17558387-HELA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
hematologic cancer	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.345945
ZNF528	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60452
anterior (rostral) cingulate (medial prefrontal) cortex_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.985491
Dry Age-Related Macular Degeneration	DisGeNET Gene-Phenotype Associations	1.0	null
Ribbon synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.3
Style	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.693
neurotrophic	GeneRIF Biological Term Annotations	1.0	null
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.7653
evaluated	GeneRIF Biological Term Annotations	1.0	null
dorsolateral TG part of the periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58909
abnormal axon morphology	MPO Gene-Phenotype Associations	1.0	null
Excretory gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
T3M3	DepMap CRISPR Gene Dependency	1.0	5.85733
regulation of organ morphogenesis	GO Biological Process Annotations 2015	1.0	null
ventricular zone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.244232
cornea	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.402901
Subpallium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.652
Nervous System Diseases	CTD Gene-Disease Associations	1.0	1.4294
PMC3115056__F1	PFOCR Pathway Figure Associations 2024	1.0	null
oncostatin-M receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.778
ZGPAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37265
SPRYD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11959
hsa-miR-4290	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
Zymosan	CTD Gene-Chemical Interactions	1.0	null
Neuroblastoma	DisGeNET Gene-Disease Associations	1.0	null
Anxiety	DisGeNET Gene-Disease Associations	1.0	null
Primary angle-closure glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.699
COLO-818	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.859135
GSE226249_5_v_3_pirfenidone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
retinal ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.654067
Intestinal Diseases	CTD Gene-Disease Associations	1.0	1.0894
HGS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71978
peripheral nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.364454
Retina	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.039
Photoreceptor inner segment	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.626
Paresthesia	CTD Gene-Disease Associations	1.0	1.17101
PTPN23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45798
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-8515-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me3_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Differentiation Pathway(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
increased susceptibility to experimental autoimmune encephalomyelitis	MGI Mouse Phenotype Associations 2023	1.0	null
Occipital pole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.624
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.921854
Usher syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.687
ctnf	GeneRIF Biological Term Annotations	1.0	null
Primary dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.2
Plasma membrane bounded cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.016
GSE130401_4_v_0_trametinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
NCI-H727	COSMIC Cell Line Gene CNV Profiles	1.0	4.51153
charcot-marie-tooth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.166995
Acute Myeloid Leukemia_LAML_TCGA-AB-3011-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061759
DDX59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35442
INIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57183
Prostate adenocarcinoma_PRAD_TCGA-VP-A87E-01A-31R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CNTF-CNTFR-gp130-LIFR complex	CORUM Protein Complexes	1.0	null
Encephalomyelitis	DisGeNET Gene-Disease Associations	1.0	null
abnormal neuron physiology	MPO Gene-Phenotype Associations	1.0	null
Acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.145
als	GeneRIF Biological Term Annotations	1.0	null
FKBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61221
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6934-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glaucoma	DisGeNET Gene-Disease Associations	1.0	null
periventricular stratum of ITTh	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10373
Neural stem cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.35
POLR2AphosphoS5_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1553
SK-MEL-24	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.832114
b104	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.736
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.022
TAOK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94613
Periglomerular cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.115
AARS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08429
regulation of cell communication	GO Biological Process Annotations 2015	1.0	null
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04133
head	GeneRIF Biological Term Annotations	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-B3-3926-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.314
Hepatobiliary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.305
adrenal medulla	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.896045
H3K4me1_olfactory bulb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE119603_1_v_0_oxaliplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Neural retina	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.146
Polymorphonuclear neutrophil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.423
VHL	Hub Proteins Protein-Protein Interactions	1.0	null
KIF1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.24426
skmel30	HPA Cell Line Gene Expression Profiles	1.0	1.11266
GART	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49183
abnormal neuron morphology	MPO Gene-Phenotype Associations	1.0	null
PMC4271569__F8	PFOCR Pathway Figure Associations 2023	1.0	null
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02744
Sleep disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.084
electroretinogram	GeneRIF Biological Term Annotations	1.0	null
Serum Total Cholesterol Measurement	DisGeNET Gene-Phenotype Associations	1.0	null
neurohypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.152972
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YE-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
possible	GeneRIF Biological Term Annotations	1.0	null
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.891377
Cervical spine	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.84
Disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.595
Syringomyelia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.342
GSE208096_1_v_0_progesterone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
oval paracentral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.39264
Paraflocculus, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14019
Gracilis muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.697
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.101128
MCUR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75065
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.03584
proliferation	GeneRIF Biological Term Annotations	1.0	null
SK-N-BE(2) cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.899
retroreuniens nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58626
H3K36me3_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.781
LIG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29009
Parietal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.504
Vestibular labyrinth	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.608
C6orf47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67016
Multiple Sclerosis	DisGeNET Gene-Disease Associations	1.0	null
Childhood spinal muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.228
Ulcerative colitis	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.172
Adipose tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.131
DCK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60176
Neurotransmitter receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.662
pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.368919
PMC8983055__F3	PFOCR Pathway Figure Associations 2024	1.0	null
CAL120	DepMap CRISPR Gene Dependency	1.0	2.04181
autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.068811
mRNA_NIPBL_20720539	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
GSE203329_0_v_3_mettl5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.08822
Retinal stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.211
SCARF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13478
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.943935
enteric nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.286381
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.14507
ependymal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.625869
regulation of phosphorylation	GO Biological Process Annotations 2015	1.0	null
PMC3269658__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.459
Amnion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.189
central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.61531
C3orf52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66221
H3K4me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Retinoschisis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.641
SNU-638	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30681
JPH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02358
SMN-Sm protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.712
H3K36me3_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Idiopathic corneal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.304
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.283
PTS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96516
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873227
Supporting cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.53
lifr	GeneRIF Biological Term Annotations	1.0	null
medial septum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.58242
Cul4A-RING E3 ubiquitin ligase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.986
GSE162688_3_v_4_pink1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ANKRD12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61263
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
regulation of cell population proliferation	GO Biological Process Annotations 2023	1.0	null
Lateral ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.407
Glioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.413
regulation of neuron apoptotic process	GO Biological Process Annotations 2015	1.0	null
Seizures	CTD Gene-Disease Associations	1.0	1.38669
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.37551
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057523
Enteric nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.32
MFE-296	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Immune system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.172
F bouton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.542
Tretinoin	CTD Gene-Chemical Interactions	1.0	null
Satellite cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.482
Lung squamous cell carcinoma_LUSC_TCGA-22-5479-01A-31R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cytokine activity	GO Molecular Function Annotations 2023	1.0	null
ZNF468	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24236
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19L-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
crush	GeneRIF Biological Term Annotations	1.0	null
hamstring muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.192164
Malignant exocrine pancreas neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.007
BT474	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.10725
Anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.309
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6934-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Anterolateral visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.48783
Infundibulum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.803
severe	GeneRIF Biological Term Annotations	1.0	null
Immune System	Reactome Pathways 2024	1.0	null
GSE221577_1_v_5_pik3r1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
secretion	GeneRIF Biological Term Annotations	1.0	null
Seed	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.992
Lung squamous cell carcinoma_LUSC_TCGA-66-2754-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KDM2B-26808549-CHIP-SEQ-REH-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Horizontal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.878
DAPK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.13008
Tetanus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.308
dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.651694
DBTRG05MG	Achilles Cell Line Gene Essentiality Profiles	-1.0	-2.11599
H3K4me2_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
biceps	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.293508
TTLL12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71007
CAMA1	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.667104
negative regulation of biological process	GO Biological Process Annotations 2015	1.0	null
Medication use (agents acting on the renin-angiotensin system)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.1699
MRPL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10517
Leaf	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.999
THAP11-20581084-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Coronavirus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.238
Rostral migratory stream	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.701
Right middle cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.798
ZYG11B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48016
Adipocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.907
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.322637
abdominal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.193753
Neurogenic bladder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.181
Nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.253
Neocortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.808
H3K4me2_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_spleen_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45963
GSE196671_5_v_0_obox4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
dose	GeneRIF Biological Term Annotations	1.0	null
Hypertrophy	CTD Gene-Disease Associations	1.0	1.09611
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.09449
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Middle silk gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.512
locked-in syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.018
MKRN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09505
RPL18A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55627
marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.139653
NFKBID	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.94591
explains	GeneRIF Biological Term Annotations	1.0	null
Hereditary sensory neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.055
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.129
Cecum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Acute Myeloid Leukemia_LAML_TCGA-AB-3002-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO-679	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Primary somatosensory area, upper limb, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.18456
delipidated	GeneRIF Biological Term Annotations	1.0	null
disease of cellular proliferation	GWASdb SNP-Disease Associations	1.0	0.035579
Fragile X syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
Autonomic nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.679
GPD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22996
composition	GeneRIF Biological Term Annotations	1.0	null
C9orf72	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85933
MBF transcription complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.97
CHD1-19587682-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
H3K4me2_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
midbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.904127
RIOX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14777
Presynaptic cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.352
regulation of retinal cell programmed cell death	GO Biological Process Annotations 2015	1.0	null
cardiovascular system disease	GWASdb SNP-Disease Associations	1.0	0.625701
PHLPP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8616
PAX2	JASPAR Predicted Transcription Factor Targets	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-HE-A5NJ-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me3_GM12865_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
positive regulation of cell communication	GO Biological Process Annotations 2015	1.0	null
Muscle fibre	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.02
Soleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.467
Extracellular region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.69
HCC1187	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.71271
age related macular degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.578106
disorders	GeneRIF Biological Term Annotations	1.0	null
Vastus medialis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.599
Posterior limiting nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.20928
white adipose tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.535438
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Adult stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.744
powerful	GeneRIF Biological Term Annotations	1.0	null
PMC6718408-41467_2019_11884_MOESM9_ESM.xlsx-YAP1_RELA_DEGs_mice_human-Human_Gene_RELA	Rummagene Transcription Factor Associations 2026	1.0	null
YTHDC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42438
Breast_Myoepithelial_Cells	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	0.968181
cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.570913
level	GeneRIF Biological Term Annotations	1.0	null
Adrenal medulla	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.054
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847041
hsa-miR-421	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
H3K36me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
reaction	GeneRIF Biological Term Annotations	1.0	null
MALME3M	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4342
PMC5669621__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.969
TIMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21922
kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.213112
Extraocular muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.146
bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.210925
GSE173201_0_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
H3K4me1_Skeletal Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
decreased neuron number	MPO Gene-Phenotype Associations	1.0	null
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44708
digestive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Compact myelin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.87
Accessory olfactory bulb, glomerular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.40926
Copper Sulfate	CTD Gene-Chemical Interactions	1.0	null
ZNF709	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50795
Neural Tube Defects	CTD Gene-Disease Associations	1.0	1.38185
PMC5899024__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Neuro-2a cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.252
PMC9378837-Table_3.xlsx-ESR2_upstream_regulators-2000-2021_QIAGEN_All_rights_reserved_ESR2	Rummagene Transcription Factor Associations 2026	1.0	null
hsa-miR-490-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Lung	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Bladder wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.811
lateral	GeneRIF Biological Term Annotations	1.0	null
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6628
Lung adenocarcinoma_LUAD_TCGA-69-8255-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Axon	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
Eye cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.638
elisa	GeneRIF Biological Term Annotations	1.0	null
hypothesis	GeneRIF Biological Term Annotations	1.0	null
PMC8755441-mmc3.xlsx-IRF3-signif-Symbol_IRF3	Rummagene Transcription Factor Associations 2026	1.0	null
PMC3141289__F1	PFOCR Pathway Figure Associations 2023	1.0	null
extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
dorsolateral prefrontal cortex_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-2.26625
autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.053421
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.02069
ASMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44095
Hindbrain	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
hippocampal	GeneRIF Biological Term Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A0C8-01A-11R-A10U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AURKB_knockdown_92_GSE27869	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.91809
positive regulation of gene expression	GO Biological Process Annotations 2025	1.0	null
apoe3	GeneRIF Biological Term Annotations	1.0	null
HCFC1-20581084-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
SP140	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46128
TAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95837
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.5807
hsa-miR-4778-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
neurofilament cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.916243
CCDC17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15518
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.25571
Bacterial nucleoid	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.68
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.1038
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	1.0	1.46156
H2BC21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77795
Integrin alphav-beta5 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.84
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.349863
PMC12717993-MEC-34-e17796-s002.xlsx-ST12_WGS_RFMix_genes_2_anc-Unnamed_14_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
Lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.51
Stigma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.75
Glutathione	CTD Gene-Chemical Interactions	1.0	null
Posterior parietal association areas, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.73493
HSC3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.44148
HCC1419	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-2.94277
Hyperopia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.035
TMCO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92803
Schizoaffective Disorder	DisGeNET Gene-Disease Associations	1.0	null
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
Exocytic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.864
Temporal lobe	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
using	GeneRIF Biological Term Annotations	1.0	null
Childhood Neuroblastoma	DisGeNET Gene-Disease Associations	1.0	null
Multiple Sclerosis, Relapsing-Remitting	HuGE Navigator Gene-Phenotype Associations	1.0	null
DEPDC7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92539
early onset of multiple sclerosis.	GAD Gene-Disease Associations	1.0	null
Myotube	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.695
Age related macular degeneration	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.52
BV-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.211
RTN4RL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36192
CCDC177	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11927
WRAP73	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49276
affinity	GeneRIF Biological Term Annotations	1.0	null
Neuron projection cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.696
Oligodendroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.935
Retinal Degeneration	DisGeNET Gene-Phenotype Associations	1.0	null
Neuromuscular junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.384
Depressed Mood	DisGeNET Gene-Phenotype Associations	1.0	null
PMC6523474__F2	PFOCR Pathway Figure Associations 2023	1.0	null
PMC3804941-supp_jem.20122709_JEM_20122709_TableS1.xlsx-Suppl_Table_1C-1772_genes-Table_S1_C_1_772_significantly_overexpressed_genes_during_AR_when_combining_p-values_at_FDR_20_AR	Rummagene Transcription Factor Associations 2026	1.0	null
BT474	Achilles Cell Line Gene Essentiality Profiles	1.0	2.49812
E2F1-18555785-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
muscle weakness	MGI Mouse Phenotype Associations 2023	1.0	null
ventrolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.28498
COLO-320-HSR	GDSC Cell Line Gene Expression Profiles	1.0	1.44526
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08728
PMC6854009__F4	PFOCR Pathway Figure Associations 2024	1.0	null
NCI-H82	GDSC Cell Line Gene Expression Profiles	-1.0	-1.53342
Embryonic brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.625
GSE226285_3_v_0_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
Ovary	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-0.8474
nephron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062143
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2145
Ganglion cell layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.949
NDUFA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81253
Naproxen	CTD Gene-Chemical Interactions	1.0	null
u2197	HPA Cell Line Gene Expression Profiles	1.0	2.42533
signal transduction	GO Biological Process Annotations 2015	1.0	null
Brain endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.32
regulation of cellular amine metabolic process	GO Biological Process Annotations 2015	1.0	null
leptininsulin	GeneRIF Biological Term Annotations	1.0	null
fundus dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.470711
Retinal pigment epithelium cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.883
GFPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70589
Dental follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.887
hsa-miR-4795-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2022
GSE227891_5_v_0_ethanol_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.304
BMI1	ChEA Transcription Factor Targets	1.0	null
Retinal rod	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.813
Bone inflammation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.883
Pancreatic adenocarcinoma_PAAD_TCGA-F2-6880-01A-11R-2156-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SMIM30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85866
ZKSCAN8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60027
CARMIL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05381
SRSF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14719
leaf	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075173
abnormal myeloid leukocyte morphology	MPO Gene-Phenotype Associations	1.0	null
PMC5940740__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Eccrine sweat gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.538
BHLHE40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39313
TT	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ALDH18A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70625
Nerve Degeneration	DisGeNET Gene-Phenotype Associations	1.0	null
METTL13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44323
Edema	CTD Gene-Disease Associations	1.0	1.51506
Vagus nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.447
SYT12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.97421
Parkinson Disease	DisGeNET Gene-Disease Associations	1.0	null
Leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.696
ovary_8a	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.85557
interneuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.337808
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0373
cellular process	GO Biological Process Annotations 2015	1.0	null
Diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.054
Piriform area	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.952
Mouth	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
heart_6b	HPA Tissue Sample Gene Expression Profiles	1.0	1.2105
superficial stratum of THyB-V	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.24136
Lung squamous cell carcinoma_LUSC_TCGA-51-4080-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
olfactory nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.402144
amniotic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.190152
Cholinergic neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.155
PMC4522610__F1	PFOCR Pathway Figure Associations 2024	1.0	null
ZR75B	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.875938
basal forebrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.985859
GSE133213_11_v_3_znrf3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Central retinal vein occlusion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.256
cellular developmental process	GO Biological Process Annotations 2015	1.0	null
Astigmatism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.102
laminin-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.646
molecular_function	GO Molecular Function Annotations 2015	1.0	null
Cotton fibre	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.509
Capillary	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.937
Amygdala	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.474
Peripheral blood cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.35
Plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.131
ZBTB25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31552
PMC4574966__F3	PFOCR Pathway Figure Associations 2023	1.0	null
DMXL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13918
TBX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0382
cytoplasm	LOCATE Predicted Protein Localization Annotations	1.0	null
ZNF91	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65212
Sensillum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.191
glycoprotein	GeneRIF Biological Term Annotations	1.0	null
GSE193258,GSE193259_5_v_12_osimertinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ACSL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47254
decreased grip strength	MGI Mouse Phenotype Associations 2023	1.0	null
ARID5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6329
posterior triangular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.92597
posteroventral (inferior) parietal cortex_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.4992
AKT1_knockout_210_GSE39699	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.41524
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.717
Cytoplasmic region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.773
regulation of response to stimulus	GO Biological Process Annotations 2015	1.0	null
MM1S	Achilles Cell Line Gene Essentiality Profiles	-1.0	-2.94936
H3K4me1_Penis Foreskin Fibroblast Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ACTL6B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.99393
Breast	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
WASF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57667
Bed nuclei of the stria terminalis, anterior division, oval nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05319
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
GSE161800_0_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
retinal vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.190168
Melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.259
ORC6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59256
Postsynapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.891
caudal ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.61022
HCFC1-20581084-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Perturb_17610_OE_U2AF35_SRP116787	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	2.78229
Parasympathetic ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.342
provided	GeneRIF Biological Term Annotations	1.0	null
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08289
DDX55	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.04935
FEZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.14924
Retinal Neuropathy	DisGeNET Gene-Disease Associations	1.0	null
Exocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Inherited Neuropathies	DisGeNET Gene-Disease Associations	1.0	null
ALKBH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60795
basal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.1554
Integrin alpha10-beta1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.5
SMYD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.8952
NCO2	DepMap CRISPR Gene Dependency	1.0	6.87303
parastrial preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.45194
Vermiform appendix	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
sk-n-be(2) cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.421148
Intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.381
GARIN5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33132
RMC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45533
cytokine receptor binding	GO Molecular Function Annotations 2023	1.0	null
Castleman disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.531
Primary somatosensory area, mouth, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0603
relapsing-remitting multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.852
PMC7914369-thnov11p3676s2.xls-BPTF-signature-geneId_BPTF	Rummagene Transcription Factor Associations 2026	1.0	null
fallopian tube	HPA Tissue Gene Expression Profiles	1.0	1.70105
abnormal immune system morphology	MPO Gene-Phenotype Associations	1.0	null
CSNK2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12549
TOV112D	Achilles Cell Line Gene Essentiality Profiles	1.0	1.46771
cerebralcortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.843218
regulation of tyrosine phosphorylation of STAT protein	GO Biological Process Annotations 2025	1.0	null
THAP11-20581084-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
OPM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.24671
Corpus striatum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.355
Nonproliferative Diabetic Retinopathy	DisGeNET Gene-Disease Associations	1.0	null
SMSCTR	DepMap CRISPR Gene Dependency	1.0	2.86656
Conjunctival epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.014
regulation of cellular amino acid metabolic process	GO Biological Process Annotations 2015	1.0	null
abnormal motor capabilities/coordination/movement	MPO Gene-Phenotype Associations	1.0	null
Fundus dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.161
NR3C2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5293
ENTR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96479
Biceps brachii	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.129
PMC7888496__F4	PFOCR Pathway Figure Associations 2024	1.0	null
abnormal brain morphology	MPO Gene-Phenotype Associations	1.0	null
Dendritic branch	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.241
Outer hair cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.798
HSC-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF33B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01079
Poisoning	CTD Gene-Disease Associations	1.0	1.19379
Neuroblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.048
Respiratory mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.561
cord	GeneRIF Biological Term Annotations	1.0	null
PMC7448569__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Charcot-Marie-Tooth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.785
SNU216	CCLE Cell Line Gene CNV Profiles	1.0	1.36315
Down syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.684
B3GNT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.7156
Death	CTD Gene-Disease Associations	1.0	1.12082
negatively	GeneRIF Biological Term Annotations	1.0	null
analyzed	GeneRIF Biological Term Annotations	1.0	null
Ciliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.576
autonomic nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.918206
H3K4me1_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
LIFR	Pathway Commons Protein-Protein Interactions	1.0	null
FBXO48	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55953
peduncular nucleus of the stria medullaris	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11686
biceps brachii	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.618603
Parkinsonism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.414
decreased oligodendrocyte progenitor number	MPO Gene-Phenotype Associations	1.0	null
MAPK6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35964
Crohn's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.349
optic nerve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.533475
Nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.149
Medium spiny neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.339
Migraine	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.2
layer 1 of PaS	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.28963
Retinal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.385
PMC4574966__F3	PFOCR Pathway Figure Associations 2024	1.0	null
lung cancer	GWASdb SNP-Disease Associations	1.0	0.514193
interleukin-9 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.687
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.35595
PMC8378993__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DB-5276-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Peripheral ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.411
RGC-5 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.155
Tegmentum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.491
ZFP90	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5192
PMC10864182-41588_2023_1596_MOESM4_ESM.xlsx-ST12_Significant_Genes_combine-Unnamed_1_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
16341039-TableS7	GeneSigDB Published Gene Signatures	1.0	null
epithelial stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.213471
SIX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9829
Skin Cutaneous Melanoma_SKCM_TCGA-BF-A1PV-01A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superior cervical ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.790212
Carpal tunnel syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.096
SF539	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05129
hsa-miR-3620	TargetScan Predicted Conserved microRNA Targets	1.0	0.199275
Thymus	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-2.28516
Amnion epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.897
POU3F4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85117
ZNF44	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79497
SLR20	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.04011
urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044967
TGIF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.673
Sympathetic ophthalmia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.075
RCC-AB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
decreased neuronal precursor cell number	MPO Gene-Phenotype Associations	1.0	null
laminin-8 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.66
VEGF-A complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.895
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6GR-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36038
PMC7029263__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Flexor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.623
Pars compacta	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.574
anatomical structure development	GO Biological Process Annotations 2015	1.0	null
Neuroma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.926
TE10	CCLE Cell Line Gene CNV Profiles	1.0	1.3567
Sarcoma_SARC_TCGA-QQ-A8VG-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Capillary endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.926
H3K4me1_Brain Substantia Nigra	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ISGF3 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.653
Carotid artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.411
anteromedial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.68276
H3K36me3_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NUDT18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65701
tibia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.234016
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9362
Eyelid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.767
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.306
body weight	GAD Gene-Disease Associations	1.0	null
Depression	DisGeNET Gene-Disease Associations	1.0	null
NPTX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.85465
Nasal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.579
TIMMDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79672
XPA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30082
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1886
Parasubiculum, layer 2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.61269
brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.803205
Lung squamous cell carcinoma_LUSC_TCGA-98-A53B-01A-11R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Posterior lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.693
Leukemia	DisGeNET Gene-Disease Associations	1.0	null
ACSL6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56063
MAIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63045
ERV3-1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34765
posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.2159
EIF4A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65988
positive regulation of cellular metabolic process	GO Biological Process Annotations 2015	1.0	null
gamma-secretase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.854
mesenchymal stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.60893
Autoimmune disease of eyes, ear, nose and throat	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.329
hsa-miR-766	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Phosphatidylinositol phosphate phosphatase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.66
regulation of protein modification process	GO Biological Process Annotations 2015	1.0	null
PMC5742522-peerj-05-4214-s005.xlsx-Sheet1-Strabismic_medial_rectus_MR_vs_donor_MR_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
Primary progressive multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.495
neuron projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.40522
PMC7897836__F2	PFOCR Pathway Figure Associations 2024	1.0	null
switch	GeneRIF Biological Term Annotations	1.0	null
SERPINB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89918
Blood coagulation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.144
H3K4me1_Adipose Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Purkinje layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.708
Neurofilament cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.743
protein complex	GO Cellular Component Annotations 2015	1.0	null
Olfactory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.668
Neurohypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.737
PRR15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24883
SOX13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93574
Age-Related Cataract	DisGeNET Gene-Disease Associations	1.0	null
binding	GO Molecular Function Annotations 2015	1.0	null
cholinergic neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.30658
HINFP	JASPAR Predicted Transcription Factor Targets	1.0	null
Neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.689
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.67821
GNS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55178
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A2EL-01A-12R-A18C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nucleus of Darkschewitsch	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10955
NCIH2052	CCLE Cell Line Gene CNV Profiles	1.0	1.38411
abnormal self tolerance	MPO Gene-Phenotype Associations	1.0	null
vitreous humor	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.722809
null	GeneRIF Biological Term Annotations	1.0	null
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.0896
Thalamic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.819
periventricular stratum of DTTh	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.32226
paraventricular nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.251279
RUNX1-30185409-HPC-MOUSE-BONEMARROW-LEUKEMIA	ChEA Transcription Factor Targets 2022	1.0	null
SLC16A14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51562
negative regulation of neuron death	GO Biological Process Annotations 2023	1.0	null
Anteromedial visual area, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26749
stellate ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.298883
specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.052333
HBS1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67484
Cul4-RING E3 ubiquitin ligase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.981
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4737-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.218398
HTT-18923047-STHDH-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC3207219__F1	PFOCR Pathway Figure Associations 2024	1.0	null
MKN7	CCLE Cell Line Gene CNV Profiles	1.0	1.72159
496100562_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.30201
orbital frontal cortex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.955622
Liver hepatocellular carcinoma_LIHC_TCGA-5C-A9VG-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsalrootganglion	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.46784
HUH6	DepMap CRISPR Gene Dependency	1.0	2.51537
496100551_PCx_no dementia_no TBI_87_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67678
bone marrow cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.701899
496100589_PCx_dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67618
POLR2AphosphoS5_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.095
Laminin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.802
Galectin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.354
MYOZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.59066
PU.1-20513432-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
Mild cognitive impairment	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.425
AB-64-ZX70_10uM	NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles	1.0	0.332774
periventricular stratum of RtC	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.00634
Posterolateral visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.12279
r10 part of solitary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.20766
retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.45265
Movement disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.659
LCLC97TM1	DepMap CRISPR Gene Dependency	1.0	2.07945
fiber	GeneRIF Biological Term Annotations	1.0	null
GTEx Nerve 20-29 vs 60-69	GTEx Tissue-Specific Aging Signatures	-1.0	-12.8093
threedimensional	GeneRIF Biological Term Annotations	1.0	null
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.17787
ZFAND6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31598
Neural stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.819
NACC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56753
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF71	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.00824
Familial (Fpah)	DisGeNET Gene-Disease Associations	1.0	null
GSE113106_0_v_5_dnm2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
posterior (caudal) superior temporal cortex (area 22c)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.09538
Major Depressive Disorder	DisGeNET Gene-Disease Associations	1.0	null
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70558
other	GAD High Level Gene-Disease Associations	1.0	0.293278
Th17 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.224
Inflammation	DisGeNET Gene-Phenotype Associations	1.0	null
Ionotropic glutamate receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.559
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.16834
Anterior commissure	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.886
cytokine cytokine receptor interaction	KEGG Pathways	1.0	null
GSDMD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02334
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.14007
Cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.012
Excitatory synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.47
TRIM56	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86008
Sphingolipidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.381
MOLM14	DepMap CRISPR Gene Dependency	1.0	2.09673
IgM immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.594
Leukopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.06
Peripheral Nerve Lesion	DisGeNET Gene-Disease Associations	1.0	null
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36038
HIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32764
Kidney	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Steatotic liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.21
Epineurium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.073
immunosorbent	GeneRIF Biological Term Annotations	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8431-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SPIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.935
abnormal brain development	MPO Gene-Phenotype Associations	1.0	null
JHH-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20248
Supraoptic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.276
voltage-gated sodium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.35
Saos-2	GDSC Cell Line Gene Expression Profiles	-1.0	-2.07613
ciliary neurotrophic factor receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.515308
positive regulation of protein phosphorylation	GO Biological Process Annotations 2015	1.0	null
peptide	GeneRIF Biological Term Annotations	1.0	null
hypothalamic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.656648
BTN2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56037
u87	HPA Cell Line Gene Expression Profiles	1.0	1.1353
Degeneration of macula and posterior pole	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.521
Abdominal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.118
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.18235
GSE228181_3_v_5_idh1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC5288595__F5	PFOCR Pathway Figure Associations 2023	1.0	null
HTT-18923047-STHdh-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
visual pathway disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.52729
cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.455284
Skin	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Leg	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.988
versus	GeneRIF Biological Term Annotations	1.0	null
Supraoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.77082
alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
GSE220806_1_v_3_progesterone_human	RummaGEO Drug Perturbation Signatures	1.0	null
Sensory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.169
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.08
NCIH1792	CCLE Cell Line Gene CNV Profiles	1.0	2.9372
GSE167224,GSE168147_3_v_5_hnrnpk_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC3115056__F1	PFOCR Pathway Figure Associations 2023	1.0	null
BMP receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.029
TRIM13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57568
dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.334356
Pain	CTD Gene-Disease Associations	1.0	1.30117
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Prostate adenocarcinoma_PRAD_TCGA-HC-7231-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Primary somatosensory area, mouth, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.24668
H3K4me2_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
internal globus pallidus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04375
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.51888
striatal septum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.01244
continuous	GeneRIF Biological Term Annotations	1.0	null
Brain endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.012
Corneal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.977
PMC5774508__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Limb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.249
Sensory cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.595
ANKRD39	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58987
EPHA7	MSigDB Cancer Gene Co-expression Modules	1.0	null
GSE169152_5_v_0_ibrutinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SMIM19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.24732
Psychotic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.924
cerebellar cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.895476
adrenal gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.720755
Usher syndrome type 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.306
Lewy neurite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.965
CHD1-26751641-CHIP-SEQ-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
CBFB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01655
SW 1116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.72249
PMC5009750__F1	PFOCR Pathway Figure Associations 2023	1.0	null
MYO1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.85119
Lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.383
NT5C3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.32989
Retinal edema	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.036
Anterior lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.248
Germ layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.138
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3JA-06A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.7807
Extracellular exosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.789
Extracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.98
ventral part of THyB	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.23135
Mercuric Chloride	CTD Gene-Chemical Interactions	1.0	null
Motor Neuron Disease	DisGeNET Gene-Disease Associations	1.0	null
PMC8638098__F5	PFOCR Pathway Figure Associations 2024	1.0	null
possesses	GeneRIF Biological Term Annotations	1.0	null
Corneal ulcer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.515
Cytoplasmic dynein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.831
Huntington Disease	DisGeNET Gene-Disease Associations	1.0	null
Cerebral cortical neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.283
Lipid metabolism disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.408
SUP-B15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.13029
PMC6854009__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Sweat gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.436
Perineurium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.814
H3K36me3_thymus_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cardiac muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.298524
METTL23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93219
PMC4404315__F3	PFOCR Pathway Figure Associations 2023	1.0	null
PU.1	MotifMap Predicted Transcription Factor Targets	1.0	null
PMC10896338-media-3.xlsx-GSEQ_TF_AP1_UP_DOWN-Unnamed_1_JUN	Rummagene Transcription Factor Associations 2026	1.0	null
spanning component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.157578
bone cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059766
PMC9530148__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.772
intermediate stratum of VTTh	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.06552
Acute Myeloid Leukemia_LAML_TCGA-AB-2812-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27ac_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
PMC6425072__F2	PFOCR Pathway Figure Associations 2024	1.0	null
regulation of axon regeneration	GO Biological Process Annotations 2023	1.0	null
Adrenal gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.001
Neuronal ceroid lipofuscinosis 3	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.089
Large intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Lung adenocarcinoma_LUAD_TCGA-55-8513-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pathogenesis	GeneRIF Biological Term Annotations	1.0	null
BHMT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27678
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.837466
astroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.93991
Adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.005
negative regulation of apoptotic process	GO Biological Process Annotations 2025	1.0	null
THAP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33347
PCGF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87188
SPP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48728
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.27699
PMC9672132__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Weight Loss	CTD Gene-Disease Associations	1.0	1.63049
Modiolus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.707
Embryonic cerebral cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.512
MAFG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74579
Eye degenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.905
growth cone	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.42396
Nausea	CTD Gene-Disease Associations	1.0	1.19966
retina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.12406
Lipid storage disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.53
TMED10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77397
Lung squamous cell carcinoma_LUSC_TCGA-37-4129-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Plant embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.996
TGIF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3096
POU2AF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73155
optic neuritis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.6003
FAM171A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69833
GSE179002_2_v_7_caprin1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE89154_1_v_3_proscillaridin_human	RummaGEO Drug Perturbation Signatures	1.0	null
cell body fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.161275
Liver Diseases	CTD Gene-Disease Associations	1.0	1.4575
Potassium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.445
GSE44157,GSE44163_1_v_0_nr6a1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Schmidt-Lanterman incisure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.216
Juxtaglomerular cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.154
SLC2A6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3858
Brain stem	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Optic neuritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.84
collagen trimer	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.241716
gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Hemorrhage	CTD Gene-Disease Associations	1.0	1.32074
neurilemmoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.735838
PMC6899527__F3	PFOCR Pathway Figure Associations 2023	1.0	null
RSU1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67663
Head muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.471
Globus pallidus, internal segment	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.02121
primary somatosensory cortex (area S1, areas 3,1,2)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.31566
abnormal oligodendrocyte apoptosis	MPO Gene-Phenotype Associations	1.0	null
pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059725
TBX10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29233
Hereditary night blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.305
ZNF410	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.14693
CAMA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3582
Abnormalities, Drug-Induced	CTD Gene-Disease Associations	1.0	1.49482
induces	GeneRIF Biological Term Annotations	1.0	null
culture condition	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.288158
Movement Disorders	CTD Gene-Disease Associations	1.0	1.6249
Embryonic stem cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.266
r28e	GeneRIF Biological Term Annotations	1.0	null
regulation of neurogenesis	GO Biological Process Annotations 2015	1.0	null
Mast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.029
ml3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.743
PTOV1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82067
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A6FZ-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bed nuclei of the stria terminalis, posterior division, interfascicular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.5779
superficial stratum of PO2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.11749
Photoreceptor outer segment	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.127
SLC6A9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84205
pd5	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.647
Rett syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.457
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03861
amplitudes	GeneRIF Biological Term Annotations	1.0	null
Bone marrow	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.118
positive regulation of gene expression	GO Biological Process Annotations 2023	1.0	null
GSE228263_0_v_1_elesclomol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Hyper IgE syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.421
HN cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.563
ventral reuniens nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.40347
Postcentral gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.262
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21181
Huntington's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.376
Oral mucosa	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
sclerosis	GeneRIF Biological Term Annotations	1.0	null
ZNF544	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98491
Flocculus, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.33578
Uterine cervix	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Ebolavirus(ZEBOV)_6day_PBMCs_rNAPc2treated_21987740_GSE24943	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	0.253243
negative regulation of programmed cell death	GO Biological Process Annotations 2015	1.0	null
Embryonic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.35
integral component of plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.135879
Bone structure disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.372
XXYLT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61614
ATAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44099
H3K4me1_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
PMC5282447__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Autoimmune disease of the nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.629
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.28
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.832114
SUP-HD1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
nervous system phenotype	MPO Gene-Phenotype Associations	1.0	null
Midbrain central gray	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.703
reduction	GeneRIF Biological Term Annotations	1.0	null
Sto	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.755
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3951
acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.467684
schizophrenia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.548971
within	GeneRIF Biological Term Annotations	1.0	null
regulation of nitrogen compound metabolic process	GO Biological Process Annotations 2015	1.0	null
TJP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95041
B3GALT9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22986
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.26691
neuroma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.795002
EXT2	Pathway Commons Protein-Protein Interactions	1.0	null
nerve sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.367502
Autosomal dominant cerebellar ataxia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.333
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873227
Primary somatosensory area, mouth, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09821
Mitral cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.509
Thigh muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.567
resulting	GeneRIF Biological Term Annotations	1.0	null
17823238-TableS4b	GeneSigDB Published Gene Signatures	1.0	null
Axon initial segment	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.818
Neoplasms	CTD Gene-Disease Associations	1.0	1.2509
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.290295
hiv1	GeneRIF Biological Term Annotations	1.0	null
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.87647
N18TG2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.942
H3K36me3_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.17
Colonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.186
negative regulation of neuron differentiation	GO Biological Process Annotations 2015	1.0	null
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.940689
developmental process	GO Biological Process Annotations 2015	1.0	null
nerve trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.743801
GSE87404,GSE87812_1_v_3_hoxa9_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
H3K27ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Dentate gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.168
component	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PGLS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55631
CTCF	ENCODE Transcription Factor Targets	1.0	null
forebrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.68254
regulation of apoptotic process	GO Biological Process Annotations 2015	1.0	null
RVH421	DepMap CRISPR Gene Dependency	1.0	3.0943
dentate gyrus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.65056
GSE199606_3_v_0_csf2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36038
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.20778
rostral interstitial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07388
positive regulation of cell proliferation	GO Biological Process Annotations 2015	1.0	null
Seedling	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.045
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8335
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.73773
MM160113	DepMap CRISPR Gene Dependency	1.0	3.0971
Ophthalmic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.491
PATL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67096
metencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.778986
Keratopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.895
retinitis pigmentosa	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.47769
TP63-23658742-EP156T-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A817-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CHTF18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47092
variability	GeneRIF Biological Term Annotations	1.0	null
POGK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17246
athletes	GeneRIF Biological Term Annotations	1.0	null
ZDHHC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42194
striatum_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.922079
sciatic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.8998
RBBP5	ENCODE Transcription Factor Targets	1.0	null
Oligodendroglioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.748
after	GeneRIF Biological Term Annotations	1.0	null
DNAJC18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12683
ATXN7L3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.91451
posterior (caudal) superior temporal cortex (area 22c)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.950699
PMC6144698__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Cementum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.727
NCIH322	CCLE Cell Line Gene CNV Profiles	-1.0	-1.96604
optic lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.833642
astrocytosis	MPO Gene-Phenotype Associations	1.0	null
diabetic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.819206
Lacrimal apparatus disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.519
Cachexia	DisGeNET Gene-Phenotype Associations	1.0	null
Vitreous humor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.171
muscle weakness	MPO Gene-Phenotype Associations	1.0	null
shoot	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.06823
Cerebral gray matter	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.392
mediated	GeneRIF Biological Term Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A8IH-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6499311-supp_gr.243345.118_Supplemental_Table_S8.xlsx-S8B_Het1A-HNF4A_2d_5x_open-Nearest_Ensembl_HNF4A	Rummagene Transcription Factor Associations 2026	1.0	null
SLCO4A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9602
Asi complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.902
cntfmediated	GeneRIF Biological Term Annotations	1.0	null
positive regulation of peptidyl-tyrosine phosphorylation	GO Biological Process Annotations 2015	1.0	null
HS 695T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.559
exocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070048
blood-brain barrier	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.003
Cytoskeleton of presynaptic active zone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.347
Blood serum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.108
Central medial nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.69392
PMC6798812__F11	PFOCR Pathway Figure Associations 2024	1.0	null
Postsynaptic membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.237
Intermediate filament cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.797
collagen-containing extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.184
neocortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.390044
ETNK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84148
Flocculus, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.21796
H-NS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.537
primary visual cortex (striate cortex, area V1/17)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.66126
muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.39559
Herpes zoster	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.161
Hypoglossal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.412
ventrolateral prefrontal cortex_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.18553
hsa-miR-3714	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5099-01A-01R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OPTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47038
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6268
TENT5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13383
Tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.531
Bronchial disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.334
spinal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.48598
Acetylcysteine	CTD Gene-Chemical Interactions	1.0	null
Dysostosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.067
Spinal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.75
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.21701
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.612
binds	GeneRIF Biological Term Annotations	1.0	null
Sm-like protein family complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.418
LAN-5 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.08
Stromal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.739
HCC1395	CCLE Cell Line Gene CNV Profiles	1.0	1.64155
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Brain myelin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.792
nerve	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
RUNX2-24764292-MC3T3-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
GUCD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4847
POMGNT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21545
PMC3048914__F6	PFOCR Pathway Figure Associations 2023	1.0	null
sk-n-sh cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.245807
GSE217552_3_v_4_fisetin_human	RummaGEO Drug Perturbation Signatures	1.0	null
PCGF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79321
GTEx Esophagus 20-29 vs 50-59	GTEx Tissue-Specific Aging Signatures	-1.0	-8.36664
GSE180813,GSE180815_1_v_0_mettl3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
effects	GeneRIF Biological Term Annotations	1.0	null
DR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66949
extracellular region part	GO Cellular Component Annotations 2015	1.0	null
astrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.89565
F3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14268
Lung Diseases	CTD Gene-Disease Associations	1.0	1.54014
PMC7568652__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Leber congenital amaurosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.111
ocular hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.597181
Cytokine Signaling in Immune system	Reactome Pathways 2024	1.0	null
r3 part of trigeminal transition zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02397
Encephalomyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.399
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.2769
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6024-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.46766
PMC3981547__F3	PFOCR Pathway Figure Associations 2024	1.0	null
PMC7076845__F7	PFOCR Pathway Figure Associations 2024	1.0	null
abnormal physical strength	MPO Gene-Phenotype Associations	1.0	null
PMC9794594-DataSheet_1.xlsx-ST12-Unnamed_1_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
NCIH727	CCLE Cell Line Gene CNV Profiles	1.0	1.70692
CGNL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18736
RUNX1T1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82772
globe disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.38603
Glutamatergic synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.412
Scotoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.835
Paranode region of axon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.423
GSE168401_2_v_3_harmine_human	RummaGEO Drug Perturbation Signatures	1.0	null
hPSC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.222
A2058	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.06808
FIS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22744
regulation of macromolecule metabolic process	GO Biological Process Annotations 2015	1.0	null
SLC27A5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02024
PMC209477__F2	PFOCR Pathway Figure Associations 2024	1.0	null
E4F1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16967
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3SR-01A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.3323
Arachnoid mater	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.793
Forebrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.866
ZMYM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34683
Sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.904
Amnion epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.874
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45792
Epiblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.014
Axon hillock	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.569
multiple	GeneRIF Biological Term Annotations	1.0	null
bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.098216
Glottis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.997
Kidney Chromophobe_KICH_TCGA-KN-8423-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Peripheral nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.88
Carpel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.685
neuroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.483986
HCC1419	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MYO1E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76691
NCIH2171	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4509
CCNDBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42455
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.925604
pregnancies	GeneRIF Biological Term Annotations	1.0	null
Cone cell pedicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.862
GNRH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79704
SLC25A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24839
PMC6826985__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.68697
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.88819
epithelial	GeneRIF Biological Term Annotations	1.0	null
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.903
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.73
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A9FS-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Esophagus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
GTEx Colon 20-29 vs 60-69	GTEx Tissue-Specific Aging Signatures	-1.0	-18.9431
DPH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94223
PMC2787730__F9	PFOCR Pathway Figure Associations 2024	1.0	null
PMC6854009__F5	PFOCR Pathway Figure Associations 2024	1.0	null
induced	GeneRIF Biological Term Annotations	1.0	null
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8135
Ocular hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.459
Periodontal ligament cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.603
EDC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40896
Neural crest-derived stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.996
SPINT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3235
Thigh	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.578
Kidney Chromophobe_KICH_TCGA-KN-8432-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Olfactory bulb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.436
Contact dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.151
TRMT2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.93359
Type 2 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.987
SAMHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9993
AASDH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95252
Neuroinflammation and glutamatergic signaling	WikiPathways Pathways 2024	1.0	null
r10 part of external cuneate nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02723
HS 852.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.29801
PMC12178829-mmc4.xlsx-Sheet_3-MEG3-KD_Down-GeneName_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Stria vascularis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.775
Trigeminal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.605
hsa-miR-3174	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
DAAM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87991
mRNA_TCF3_20139965	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
CDK16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62033
SUPT7L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65541
Depressive Disorder	HuGE Navigator Gene-Phenotype Associations	1.0	null
Anteromedial nucleus, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.81346
SLC23A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79878
site	GeneRIF Biological Term Annotations	1.0	null
exercise	GeneRIF Biological Term Annotations	1.0	null
cytokine activity	GO Molecular Function Annotations 2025	1.0	null
neural crest	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.637999
ZFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07081
spinal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.592845
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.0003
Retinitis pigmentosa 3	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.015
SCC-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MCF7	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.1211
T-bar	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.551
abnormal axon extension	MPO Gene-Phenotype Associations	1.0	null
SIMA	GDSC Cell Line Gene Expression Profiles	1.0	1.84292
Myelin membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.766
regulation of cellular ketone metabolic process	GO Biological Process Annotations 2015	1.0	null
Congenital stationary night blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.31
TAB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44733
nose	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.270214
GSE184902_4_v_0_adipor1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.691
fold	GeneRIF Biological Term Annotations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CK-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A6QZ-01A-12R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
vertebrate muscular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.06823
NHLRC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50583
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A901-01A-11R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC7145703__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Taenia tecta, dorsal part, layer 2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02133
hsa-miR-3120-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
glia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.06584
PMC3334867__F5	PFOCR Pathway Figure Associations 2024	1.0	null
ZFP69	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.89684
TMEM184C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92719
SOX8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.94505
abnormal glial cell apoptosis	MPO Gene-Phenotype Associations	1.0	null
Thrombosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.204
vascular tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.110849
Brown adipose tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.928
TMEM35A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47544
Lung adenocarcinoma_LUAD_TCGA-MP-A4TJ-01A-51R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE87404,GSE87812_1_v_0_hoxa9_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Neural crest	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.934
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069404
PMC9424213-41467_2022_32537_MOESM6_ESM.xlsx-siHNRNPK_cyto-DEGs_for_hnRNPK_KD_cytoplasmic_RNA_of_HeLa_cells_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Septohippocampal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27489
Primary somatosensory area, unassigned, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.41998
muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.71078
Prion disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.36
Neuromuscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.948
GPR162	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.96946
Infertility, Male	CTD Gene-Disease Associations	1.0	1.60384
neuron development	GO Biological Process Annotations 2015	1.0	null
opiate dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.135717
INPPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6858
Dorsum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.371
ectoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.314046
Substantia nigra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.99
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.027
Retinitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.247
Optic atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.44
FOXE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39085
fallopiantube_8b	HPA Tissue Sample Gene Expression Profiles	1.0	0.863492
Bleb	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.251
PMC5940740__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Cytokine-cytokine receptor interaction	KEGG Pathways 2026	1.0	null
H1-5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68552
YMB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40809
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.455
ptt	GeneRIF Biological Term Annotations	1.0	null
DPY19L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70863
respiratory system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
synucleinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.142493
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36088
ZHX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20489
ZNF287	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7194
CORL105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44017
Mental Depression	DisGeNET Gene-Disease Associations	1.0	null
CBP-21632823-H3396-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
spinalcordupper	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.868514
occurs	GeneRIF Biological Term Annotations	1.0	null
Neuron spine	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.749
ChIP_THAP11_20581084	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
muscle organ morphogenesis	GO Biological Process Annotations 2015	1.0	null
neuronal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.658272
HAoAF cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.701
AIF1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74301
FBRSL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82069
H2BK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02322
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3C13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42201
liver cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.082277
Skin Cutaneous Melanoma_SKCM_TCGA-BF-A1PU-01A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
substantia nigra	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.444884
Brain Lower Grade Glioma_LGG_TCGA-DU-7007-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
urinary system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.48048
PMC8589993__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Dorsal raphe nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.679
Autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.283
Sternocleidomastoid muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.746
Lung adenocarcinoma_LUAD_TCGA-86-A4D0-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.15416
Presynaptic membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.041
parvocellular part of r8LRt	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14473
PMC9999213-mmc1.xlsx-DEGs_vs_2D-DEA_NB_MSC_CSc_vs_NB_2D_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
aspirin	GeneRIF Biological Term Annotations	1.0	null
only	GeneRIF Biological Term Annotations	1.0	null
hepatoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.378748
voltage-gated calcium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.139
body weight; overweight	GAD Gene-Disease Associations	1.0	null
SHKBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28904
Depressive Disorder, Major	HuGE Navigator Gene-Phenotype Associations	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.897057
Nervous system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
PMC7181582__F7	PFOCR Pathway Figure Associations 2023	1.0	null
LGI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39423
cerebral cortical neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.589635
H3K9ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE95688_1_v_3_glutathione_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Somatosensory cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.247
very	GeneRIF Biological Term Annotations	1.0	null
SNAPC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52218
myoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.242054
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.816
Thalamus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.999
Vascular cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.371
Retinal artery occlusion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.677
Lewy body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.283
eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.38603
Retinoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.116
FAHD2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41127
toxic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.497703
NFYB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86468
Primary somatosensory area, unassigned, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14148
Mitochondrial permeability transition pore complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.812
GSE242049_1_v_0_txndc5_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Endoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.323
Ethmoid bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.871
CAS1	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.1811
GSE200673,GSE200691_1_v_3_hmga2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
OCIAML3	Achilles Cell Line Gene Essentiality Profiles	1.0	1.51132
hsa-miR-4727-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Diabetes Mellitus, Type 2	HuGE Navigator Gene-Phenotype Associations	1.0	null
Oviduct	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Liver hepatocellular carcinoma_LIHC_TCGA-ZS-A9CF-02A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Oligodendroglioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.559
degeneration	GeneRIF Biological Term Annotations	1.0	null
Muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.488
demyelinating disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.03325
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Osteogenic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.786
Glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.151
NAGA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.98583
FAM210B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35744
APRT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59319
SCYL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07263
PMC2787730__F9	PFOCR Pathway Figure Associations 2023	1.0	null
Sciatic nerve	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Kidney Tubular Necrosis, Acute	CTD Gene-Disease Associations	1.0	1.03159
Tapetum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.547
Postsynaptic density	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.261
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.6308
GSE166169_1_v_3_elp3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ZFPM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22927
Astroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.084
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.16503
Peripheral Nervous System Diseases	CTD Gene-Disease Associations	1.0	1.18489
Suprachiasmatic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.382
Paracentral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26907
Neuron projection terminus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.309
dorsolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.47973
Neurobehavioral Manifestations	DisGeNET Gene-Phenotype Associations	1.0	null
Synostosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.133
plant parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.230382
Hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.675
CTDSPL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93333
CIT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.03749
Pterygium	DisGeNET Gene-Disease Associations	1.0	null
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.553
Multiple Sclerosis	HuGE Navigator Gene-Phenotype Associations	1.0	null
abnormal neuron proliferation	MPO Gene-Phenotype Associations	1.0	null
PMC7738628__F5	PFOCR Pathway Figure Associations 2023	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A2LS-01A-22R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute myocardial infarction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.055
Carcass	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.062
Cochlea	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.643
DAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57298
PMC4404315__F3	PFOCR Pathway Figure Associations 2024	1.0	null
H3K4me1_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
AKAP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7566
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
positive regulation of response to external stimulus	GO Biological Process Annotations 2025	1.0	null
H3K23ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PMC3480664__F1	PFOCR Pathway Figure Associations 2023	1.0	null
imr-32 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.884167
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.431843
PMC12082120-mmc1.xlsx-Table_S1_-Diffusion-LPS_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
MAJIN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71959
vascular bundle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.118067
MCIDAS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48644
KMS-21BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.14935
Scalp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.212
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.3296
RTL8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12712
Ventral group of the dorsal thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23354
laminin-2 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.214
PLAGL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45673
primary motor cortex (area M1, area 4)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.45038
CAMA1	CCLE Cell Line Gene CNV Profiles	1.0	1.55549
RAB8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46424
KCTD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.93172
Lung adenocarcinoma_LUAD_TCGA-44-6778-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042276
A1207	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.25093
OGFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80339
TCF20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.05139
rescue	GeneRIF Biological Term Annotations	1.0	null
primary motor cortex (area M1, area 4)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.02487
cytokine-mediated signaling pathway	GO Biological Process Annotations 2015	1.0	null
Celiac ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.566
experiments	GeneRIF Biological Term Annotations	1.0	null
BAIAP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18498
RAB4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38424
Sciatic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.723
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10279
adipose tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.721577
GSE211286_7_v_3_tcf12_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
spiral organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.255234
ZW10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23988
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44708
cerebellar cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.724453
H3K36me3_testis_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TBX18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68199
axon	GO Cellular Component Annotations 2025	1.0	null
HTT	ChEA Transcription Factor Targets	1.0	null
regulation of cell development	GO Biological Process Annotations 2015	1.0	null
X-linked juvenile retinoschisis 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.65
Overnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.149
cerebral white matter	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.580818
MCF7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62144
retinal pigment epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.630718
Calvarium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.079
lymphoma	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.345945
GSE192870_2_v_0_palbociclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HCC70	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.6513
Brain Lower Grade Glioma_LGG_TCGA-DU-6396-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Autoimmune disease of peripheral nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.501
H3K36me3_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal motor neuron morphology	MGI Mouse Phenotype Associations 2023	1.0	null
Signal recognition particle receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.702
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
erythroleukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.723631
KHK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44642
Pheochromocytoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.351
Nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.257
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.17946
paraterete nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04865
Nephritis, Interstitial	CTD Gene-Disease Associations	1.0	1.10699
JHH5	CCLE Cell Line Gene CNV Profiles	1.0	2.05067
Pluripotent stem cell differentiation pathway	WikiPathways Pathways 2024	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	0.878717
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-4863-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KP3	CCLE Cell Line Gene CNV Profiles	1.0	1.49654
LDOC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32933
weight maintenance	GAD Gene-Disease Associations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-RS-A6TP-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GOTO cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.065
anterior ischemic optic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.257711
Purkinje cell layer of CbHCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.07661
Quadriplegia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.558
tetanus neonatorum	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.622183
Retinal cone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.901
Meninx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.065
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
Dinoflagellate epicone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.069
Bipolar disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.49
Cerebellar disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.384
X-linked recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.687
BCL6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6062
ZNF675	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.7677
Glial cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.778
NKG7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62527
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4641-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.576
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.493
OSBPL9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24545
axon degeneration	MGI Mouse Phenotype Associations 2023	1.0	null
abnormal muscle physiology	MPO Gene-Phenotype Associations	1.0	null
GSE173873_10_v_13_stra8_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC10864182-41588_2023_1596_MOESM4_ESM.xlsx-ST12_Significant_Genes_combine-Supplementary_Table_12_Genes_prioritisation_combining_FUMA_MAGMA_Hi-C_MAGMA_and_TWAS_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
gut	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.107747
plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.333979
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.585625
hippocampal pyramidal layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.487886
Ileocecum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
COLO741	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.23665
Mood disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.195
placebo	GeneRIF Biological Term Annotations	1.0	null
cytokines	GeneRIF Biological Term Annotations	1.0	null
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6007
TPRN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19783
huntington's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.36597
TIGD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75784
VRK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22328
regulator	GeneRIF Biological Term Annotations	1.0	null
T84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.00607
Nonpigmented ciliary epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.7
PMC6425613__F6	PFOCR Pathway Figure Associations 2023	1.0	null
PMC7029263__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Microglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.724
Forelimb muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.634
aerobic	GeneRIF Biological Term Annotations	1.0	null
ciliary neurotrophic factor-mediated signaling pathway	GO Biological Process Annotations 2023	1.0	null
Myelencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.004
GSE190186,GSE190188_8_v_5_apoe_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
YWHAG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66729
properties	GeneRIF Biological Term Annotations	1.0	null
C6orf120	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.39932
Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
KG1	CCLE Cell Line Gene CNV Profiles	1.0	1.4641
motor neuron degeneration	MPO Gene-Phenotype Associations	1.0	null
P53_DN.V2	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
STXBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78572
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.585
Pulse pressure	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.2
mediodorsal nucleus of thalamus_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	2.37052
Endothelial progenitor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.227
hsa-miR-1178	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
Neuronal cell body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.198
Osteoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.684
fiber	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.11686
corneal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.444115
H3K4me1_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
neuroblastoma	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-2682	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
HEC108	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77476
Nitrofurantoin	CTD Gene-Chemical Interactions	1.0	null
H3K36me3_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE130217_0_v_3_sesn2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Photoreceptor cell cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.049
extracellular region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.552251
osteoclast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.1988
Olfactory epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.558
platelet-derived growth factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.293
neuroepithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.482038
GSE108614,GSE108615_3_v_2_setd1a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Cytokine cytokine receptor interaction	WikiPathways Pathways 2024	1.0	null
OVCAR-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.990122
PMC10040389-mmc7.xlsx-URs_IMIDs_SP1_6-UR_SP1	Rummagene Transcription Factor Associations 2026	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-ED-A82E-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SEC14L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69977
Tuberomammillary nucleus, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.7431
AMH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37957
AP2B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82695
Parathyroid gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
FOXP1_01_209	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.26114
GSE136894_1_v_0_psen1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
UACA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15976
Ischemic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.403
early	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-4426	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
UACC893	DepMap CRISPR Gene Dependency	1.0	3.2702
Elongin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.546
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.38467
SLC5A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15307
Myeloid neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.375
MICA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75712
cochlear ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.644479
Globoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.921
USF2	ENCODE Transcription Factor Targets	1.0	null
Nephritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.015
496100507_FWM_dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.40956
Cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
Disease Models, Animal	HuGE Navigator Gene-Phenotype Associations	1.0	null
MEIS1-26253404-OPTIC-CUPS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
HOXC13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97333
HS 69ST	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.06415
Traumatic brain injury	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.279
gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Abductor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.807
Trunk	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
OVMIU	DepMap CRISPR Gene Dependency	1.0	2.44062
disease	GWASdb SNP-Disease Associations	1.0	0.026826
MRPS27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06858
Ectorhinal area/Layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14409
TEF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4929
Disease of anatomical entity	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.595
MAST1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4084
Glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.871
Photoreceptor outer segment membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.013
candidate	GeneRIF Biological Term Annotations	1.0	null
brain_3c	HPA Tissue Sample Gene Expression Profiles	1.0	0.832543
Inner hair cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.087
bone marrow stromal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308251
Tonsil	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
SPOTS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.929
FAAP100	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82428
Ulcerative colitis	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.504576
ganglion	GeneRIF Biological Term Annotations	1.0	null
KMS-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.82678
Uveal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.887
TP53I3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.10307
LPS6	DepMap CRISPR Gene Dependency	1.0	3.27296
Status epilepticus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.157
NCIH716	CCLE Cell Line Gene CNV Profiles	-1.0	-2.28923
Cone dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.81
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RT-A6YC-01A-12R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC1817809__F2	PFOCR Pathway Figure Associations 2024	1.0	null
RRAGA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36172
cochlear duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.237513
Ependymocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.029
cell surface receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
NKX2-5	JASPAR Predicted Transcription Factor Targets	1.0	null
KDM2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82467
spinal stenosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.172799
abdominal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.111353
clonal	GeneRIF Biological Term Annotations	1.0	null
Microcephaly	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.138
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.422
increased susceptibility to injury	MGI Mouse Phenotype Associations 2023	1.0	null
Hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.225
thigh muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.169015
fourth ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.182969
Bone marrow stromal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.663
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.899036
PMC8950247__F3	PFOCR Pathway Figure Associations 2024	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2824-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CDK8_knockdown_130_GSE30816	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	2.25494
Bone marrow cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.316
NKRF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93395
peripheral nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.668345
Posterior parietal association areas, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.52114
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.54451
Primary somatosensory area, barrel field, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02071
brain stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.11243
GSE145639_7_v_4_adar_human	RummaGEO Gene Perturbation Signatures	1.0	null
PIEZO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40453
adult stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.41814
PMC7076845__F7	PFOCR Pathway Figure Associations 2023	1.0	null
differentiation	GeneRIF Biological Term Annotations	1.0	null
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.859135
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.451
abrogatesil6	GeneRIF Biological Term Annotations	1.0	null
Interphotoreceptor matrix	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.504
Keratocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.315
effect	GeneRIF Biological Term Annotations	1.0	null
Fast twitch muscle fiber	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.905
Microglial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.313
laminin-4 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.5
regulation of signaling	GO Biological Process Annotations 2015	1.0	null
Gastrointestinal system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.595
White adipose tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.912
Pancreatic carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.008
lateral TG part of the periaqueductal gray	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.47739
Muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.082
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.73999
H3K36me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Metencephalon	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Peripheral_Blood_Mononuclear_Primary_Cells	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	0.978536
BT474	CCLE Cell Line Gene CNV Profiles	1.0	1.671
POLR2A_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.518
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7252-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Temporomandibular joint	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.6
SF1	MotifMap Predicted Transcription Factor Targets	1.0	null
Cranial ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.598
Radial nerve lesion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.12
FAM219A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17767
hypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.28107
H3K36me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regulation of neuron differentiation	GO Biological Process Annotations 2015	1.0	null
Basal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.384
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39185
Alzheimer Disease	DisGeNET Gene-Disease Associations	1.0	null
snoutepidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.959223
PRRG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82013
Peripheral nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.957
Tibia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.614
GJA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01297
lower	GeneRIF Biological Term Annotations	1.0	null
SK-N-MC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.726
Exoskeleton	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.735
PMC9376070-41419_2022_5157_MOESM18_ESM.xlsx-Sheet1-Table_S4_Differentially_expressed_genes_of_HNRNPC-KD_and_NC_cells_identified_in_the_RNA-seq_analysis_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GTEx Muscle 20-29 vs 50-59	GTEx Tissue-Specific Aging Signatures	-1.0	-5.96576
polyneuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.208245
pancreas	HPA Tissue Gene Expression Profiles	-1.0	-1.04917
subcuneiform nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04579
EBC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RORA_1	MotifMap Predicted Transcription Factor Targets	1.0	null
superficial stratum of r10Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02594
median nucleus of thalamus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.250627
Trigeminal nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.814
Olfactory ensheathing cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.248
positive regulation of peptidyl-tyrosine phosphorylation	GO Biological Process Annotations 2025	1.0	null
Human immunodeficiency virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.216
Pigment granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.996
PMC6262299__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Secretory vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.851
MYB-21317192-ERMYB-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
positive regulation of axon regeneration	GO Biological Process Annotations 2023	1.0	null
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.19542
CFL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35467
zone	GeneRIF Biological Term Annotations	1.0	null
Colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.122
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.20808
GSE139966_1_v_0_figla_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Serotonergic neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.286
Focal epilepsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.417
9+0 non-motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.96
GSE202744_1_v_3_toyocamycin_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZSCAN22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79973
Dura mater	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.195
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7875
PBX1	ChEA Transcription Factor Targets	1.0	null
Hereditary ataxia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.382
MDK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86016
DAG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.11101
positive regulation of signaling	GO Biological Process Annotations 2015	1.0	null
Gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
extracellular matrix part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.245323
Skin Cutaneous Melanoma_SKCM_TCGA-RP-A6K9-06A-41R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RT4-D6P2T cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.709
PTPRZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58808
DNTTIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16287
Lung squamous cell carcinoma_LUSC_TCGA-22-4605-01A-21R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TMEM127	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.75062
either	GeneRIF Biological Term Annotations	1.0	null
glioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.446038
Colon	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
established	GeneRIF Biological Term Annotations	1.0	null
rMC-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.043
THOC7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17667
OLFML3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4954
positive regulation of phosphate metabolic process	GO Biological Process Annotations 2015	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.03302
posterior (caudal) superior temporal cortex (area 22c)_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.65746
Semaphorin receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.56
RFX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4637
GSE101239_5_v_1_valproic acid_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
HS 255.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.29079
L-type voltage-gated calcium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.9
abnormal immune tolerance	MPO Gene-Phenotype Associations	1.0	null
macroglia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.9826
diabetic retinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.213959
Myopia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.588
PRKD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3264
Sarcoma_SARC_TCGA-DX-A6YR-01A-33R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
plant reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068665
SMARCA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88841
extracellular region part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
H3K27ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Psoriasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.268
non-myelinating Schwann cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.456
Gynoecium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.684
Dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.292
hsa-miR-1224-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
cos-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.216325
PMC6718713__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Krebs II ascites cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.598
Peripheral nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.649
MLXIPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70456
regulation of nervous system development	GO Biological Process Annotations 2015	1.0	null
acid	GeneRIF Biological Term Annotations	1.0	null
goto cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.401007
PMC7897836__F2	PFOCR Pathway Figure Associations 2023	1.0	null
PMC2605487__F2	PFOCR Pathway Figure Associations 2023	1.0	null
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.978439
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NE-01A-11R-A27V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC4211625__F1	PFOCR Pathway Figure Associations 2024	1.0	null
PMC4032097__F9	PFOCR Pathway Figure Associations 2024	1.0	null
GSE241031_0_v_2_abemaciclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
dentate	GeneRIF Biological Term Annotations	1.0	null
extracellular space	GO Cellular Component Annotations 2015	1.0	null
PMC6117931-12864_2018_5033_MOESM3_ESM.xlsx-Fay_Heat_LPStoThermoneutral_LPS-Gene_Symbol_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
DCAF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58576
Somatodendritic compartment	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
Nose	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.595
CAPZA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.75392
MBIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26584
PMC7216262__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Anterior horn cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.053
Cervical ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.912
key	GeneRIF Biological Term Annotations	1.0	null
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.386
Keratitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.815
Primary somatosensory area, unassigned, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3448
lung	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Kidney renal clear cell carcinoma_KIRC_TCGA-B8-4143-01A-01R-1188-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF480	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92412
dorsolateral prefrontal cortex_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.64502
sensory cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.44868
Obstructive lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.013
Skin fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.525
Neural tube defect	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
lif	GeneRIF Biological Term Annotations	1.0	null
Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.16035
cns	GeneRIF Biological Term Annotations	1.0	null
cerebellar cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.52445
H3K4me3_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A3GK-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TYK-NU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.08501
MON1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24841
retinal ganglion cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.01505
SSBP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99245
mediodorsal nucleus of thalamus_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.70472
PRDM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70192
single-organism cellular process	GO Biological Process Annotations 2015	1.0	null
PRKAR1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3285
regulation of developmental process	GO Biological Process Annotations 2015	1.0	null
BE2-M17	COSMIC Cell Line Gene Mutation Profiles	1.0	null
retinal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.249329
COLO-800	GDSC Cell Line Gene Expression Profiles	1.0	1.81729
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.01362
extensor	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.592043
Cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.856
mammalian phenotype	MPO Gene-Phenotype Associations	1.0	null
Bone development disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
Anemia	CTD Gene-Disease Associations	1.0	1.24087
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Calpain complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.702
brain ventricle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.12704
PMC9793423__F1	PFOCR Pathway Figure Associations 2024	1.0	null
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69342
Entorhinal cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.417
ARHGEF16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.46838
Immature cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.377
Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A3JM-01A-12R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF678	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34909
Temporal arteritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.021
Yolk sac	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.217
plant vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.500007
heart muscle	HPA Tissue Protein Expression Profiles	-1.0	-0.886615
Lymphatic system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.524
External encapsulating structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.45
Skeletal muscle cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.439
Lung adenocarcinoma_LUAD_TCGA-44-8119-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
External ectoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.773
realtime	GeneRIF Biological Term Annotations	1.0	null
High grade glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.638
interleukin-27 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.164315
intermediate stratum of PcPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.69708
ZIC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73269
Caspase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.668
Enteric plexus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.823
UBE2L5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52111
MYBL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9577
cold-induced sweating syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.21
Osteoclastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.273
IFT20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53266
cv-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.168847
all	GWASdb SNP-Phenotype Associations	1.0	0.02993
PMC6826985__F5	PFOCR Pathway Figure Associations 2023	1.0	null
RAD17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2047
MITF-21258399-MELANOMA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-6986-11A-01R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DGKQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57589
thalamus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.502357
Eating Disorders	HuGE Navigator Gene-Phenotype Associations	1.0	null
SK-N-BE(2)C cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.803
Complex of collagen trimers	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.718
GSE123502,GSE123504_1_v_0_chd4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.871976
Cochlear hair cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.955
NALM6	Achilles Cell Line Gene Essentiality Profiles	-1.0	-1.10453
GSE211177,GSE211178_0_v_3_ets1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Cerebrovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
NCI-SNU-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.891
abnormal neuron proliferation	MGI Mouse Phenotype Associations 2023	1.0	null
Kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.646
SPSB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07183
vesicle	COMPARTMENTS Experimental Protein Localization Evidence Scores	1.0	0.233497
Embryoid body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.122
COMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06122
anatomical structure morphogenesis	GO Biological Process Annotations 2015	1.0	null
Respiratory failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.452
vivo	GeneRIF Biological Term Annotations	1.0	null
Retinal perforation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.664
RN-46A cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.075
eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.05033
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.978439
Motoneuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.023
Urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.021
Lumbosacral plexus lesion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.06
Astroglial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.074
NANOG-18347094-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-43-A56U-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tanycyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.319863
Cartilage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.774
Edema	HuGE Navigator Gene-Phenotype Associations	1.0	null
FXR	MotifMap Predicted Transcription Factor Targets	1.0	null
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.512
muller	GeneRIF Biological Term Annotations	1.0	null
Familial febrile seizures 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.131
PMC7382829__F6	PFOCR Pathway Figure Associations 2024	1.0	null
POLR2A_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Parenchyma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.05
Neuronal cell body	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
alitretinoin_homo sapiens_gpl6480_gse43090	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Fast muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.937
benefit	GeneRIF Biological Term Annotations	1.0	null
Cerebral cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.796
Pheochromocytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.291
Corn silk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.785
communicating hydrocephalus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.204263
showed	GeneRIF Biological Term Annotations	1.0	null
Gastrointestinal Diseases	CTD Gene-Disease Associations	1.0	1.06406
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.165
brain cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076839
peripheral ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.48504
cos cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.180042
Myoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.68
DDHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67607
COLO678	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80321
Sympathetic chain	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.014
Juxtaparanode region of axon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.808
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.7785
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.83951
H3K36me3_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
aging	GAD High Level Gene-Disease Associations	1.0	0.293278
regulation of cellular metabolic process	GO Biological Process Annotations 2015	1.0	null
PMC2517789__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Neuroepithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.167
SNAP47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25281
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057738
Sumatriptan	CTD Gene-Chemical Interactions	1.0	null
H3K9ac_Adipose Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Fibre tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.2
IRF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9921
Medial temporal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.62
MDA-MB-134-VI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83383
Somatodendritic compartment	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.501
Atf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.4444
Mature cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.56
496100573_HIP_no dementia_no TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.09689
variants	GeneRIF Biological Term Annotations	1.0	null
neuronal cell body	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.333225
interleukin-6 receptor binding	GO Molecular Function Annotations 2015	1.0	null
GOLGA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82395
Jun	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.9452
neoplasm of the respiratory system	GWASdb SNP-Phenotype Associations	1.0	0.253028
Cell projection membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.461
diencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.06956
DLC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86544
Lung adenocarcinoma_LUAD_TCGA-75-7025-01A-12R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PTPRS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14639
SOX4	MotifMap Predicted Transcription Factor Targets	1.0	null
primary auditory cortex (core)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.44769
LRRC20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25695
HUPT4	DepMap CRISPR Gene Dependency	1.0	8.46127
PMC10779880__F4	PFOCR Pathway Figure Associations 2024	1.0	null
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.871331
GSE142684_3_v_1_prdm16_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
496100457_TCx_dementia_TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67711
Embryonic carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.948
Synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.733
PRSS16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20176
internal male genital organ	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.23362
GSS	CCLE Cell Line Gene CNV Profiles	1.0	1.3707
P2URK562	DepMap CRISPR Gene Dependency	1.0	3.12263
H3K36me3_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
spite	GeneRIF Biological Term Annotations	1.0	null
Plumule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.999
Spinal column	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.198
NTERA-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.78
TOMM70	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46643
ZR751	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.27226
activate	GeneRIF Biological Term Annotations	1.0	null
SNU308	DepMap CRISPR Gene Dependency	1.0	4.00487
ZPR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38051
POLR2AphosphoS5_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mRNA_KLF4_18264089	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.25272
H3K4me1_Stomach Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
other source	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.43662
STAT3-23295773-U87-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC7145703__F5	PFOCR Pathway Figure Associations 2024	1.0	null
central nervous system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
FAAP20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4165
Night blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.881
Erythroleukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.995
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SLF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2663
Renal Insufficiency	CTD Gene-Disease Associations	1.0	1.08655
Anteromedial visual area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.2601
Photoreceptor connecting cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.791
sense organ	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
GSE226397_0_v_1_cystine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ITGB3BP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86041
hippocampus	GeneRIF Biological Term Annotations	1.0	null
PR cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.269
leptin	GeneRIF Biological Term Annotations	1.0	null
myeloid progenitor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.138047
LASV_FML29_8hr_24069471_GSE41300	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.02631
PEX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56951
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.357
USF2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_HL-60_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Four-helical cytokine-like, core	InterPro Predicted Protein Domain Annotations	1.0	null
Asymmetric synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.278
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935876
artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.29996
PCDH18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.03895
fallopiantube_8e	HPA Tissue Sample Gene Expression Profiles	1.0	1.02772
661w cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.561245
GSE150669_2_v_3_roxadustat_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
regulation of cell proliferation	GO Biological Process Annotations 2015	1.0	null
SCC15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33105
NFATC2IP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62147
PMC3070659__F1	PFOCR Pathway Figure Associations 2024	1.0	null
HCC1954	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.715252
TSTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59125
cell surface receptor signaling pathway via JAK-STAT	GO Biological Process Annotations 2025	1.0	null
regulation of intracellular signal transduction	GO Biological Process Annotations 2015	1.0	null
ATP6AP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9347
Congestive heart failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.261
Cardiac arrest	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.008
PMC5288595__F5	PFOCR Pathway Figure Associations 2024	1.0	null
ARSK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0095
GTF2H5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76924
karpas707	HPA Cell Line Gene Expression Profiles	-1.0	-1.57272
Reticulum trabeculare	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.038
RAB5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92439
PMC10989355__F2	PFOCR Pathway Figure Associations 2024	1.0	null
LSR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39569
Supramolecular fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.739
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.218
PMC2911501__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Internal carotid artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.012
Polymeric cytoskeletal fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.765
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.76596
COX14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57156
Osteoarthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.31
Iris disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.264
schwann cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.888405
HPF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69645
abnormal neuron differentiation	MPO Gene-Phenotype Associations	1.0	null
vestibular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.446807
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GAL3ST4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.08425
Kidney Chromophobe_KICH_TCGA-KL-8336-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Apical distal dendrite	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.537
MGAT5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65239
NG-108-15 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.936
substance dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.083736
External plexiform layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.179
C1orf56	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67029
nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.497703
regulation of cell differentiation	GO Biological Process Annotations 2015	1.0	null
Interanteromedial nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.97006
Vascular dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.221
Primary visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.48131
CAMLG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83653
GSE155852_0_v_2_apigenin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
TBKBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.03405
positive regulation of neuron projection regeneration	GO Biological Process Annotations 2023	1.0	null
CCNK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74991
Ciliopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.081
hsa-miR-548d-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
LPGAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83651
Trigeminal nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.733
ULK1_knockout_198_GSE60778	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.17308
H3K9me3_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Subfornical organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.749
engage	GeneRIF Biological Term Annotations	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2872-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nasopharynx	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Brain Diseases	CTD Gene-Disease Associations	1.0	1.44084
endometriosis	GeneRIF Biological Term Annotations	1.0	null
p4	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.565
Muscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.024
Anteromedial visual area, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.39647
Adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.765
Cell cortex region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.34
Interanterodorsal nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.52406
cell culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.43477
KLF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.9518
GSE171175,GSE171181_1_v_0_e7107_human	RummaGEO Drug Perturbation Signatures	1.0	null
Leber hereditary optic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.794
Tuberomammillary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.65884
Synucleinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.499
PBX1-22567123-OVCAR3-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Sprout	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.543
disease of cellular proliferation	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.345945
positive regulation of phosphorylation	GO Biological Process Annotations 2015	1.0	null
detrimental	GeneRIF Biological Term Annotations	1.0	null
CEBPB-20513432-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
hematopoietic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.072241
NYNRIN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31919
certain	GeneRIF Biological Term Annotations	1.0	null
abnormal grip strength	MPO Gene-Phenotype Associations	1.0	null
C18orf32	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51478
dendritic tree	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.179459
Liver hepatocellular carcinoma_LIHC_TCGA-EP-A12J-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Axon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.992
Autism spectrum disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.807
DMS53	CCLE Cell Line Gene CNV Profiles	-1.0	-2.07474
corresponding	GeneRIF Biological Term Annotations	1.0	null
SUM185PE	DepMap CRISPR Gene Dependency	1.0	2.72129
Astrocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.195
viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.045101
spatial	GeneRIF Biological Term Annotations	1.0	null
Birdshot chorioretinopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.185
modifier	GeneRIF Biological Term Annotations	1.0	null
TTT complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.71
H3K36me3_keratinocyte_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A4AC-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dorsal striatum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.771
Outer plexiform layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.142
BHT101	DepMap CRISPR Gene Dependency	1.0	2.90073
Choroid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.054
Neonate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.428
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.035
tat	GeneRIF Biological Term Annotations	1.0	null
abnormal glial cell morphology	MPO Gene-Phenotype Associations	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-8204-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Neuron projection membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.626
forelimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.736382
chronic cystitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.290821
skeletal muscle fiber	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.215341
GSE188458_2_v_4_hydrogen peroxide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
non-motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.992
POLR2A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell development	GO Biological Process Annotations 2015	1.0	null
laminin-10 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.774
neuroprotection	GeneRIF Biological Term Annotations	1.0	null
Retinal vascular occlusion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.928
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.52936
Kidney renal clear cell carcinoma_KIRC_TCGA-DV-A4W0-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.871
increased astrocyte number	MPO Gene-Phenotype Associations	1.0	null
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.14632
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-7919-01A-11R-2156-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ADCY6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52906
GSE253056_0_v_1_erythropoietin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
STAT3	ChEA Transcription Factor Targets	1.0	null
astrocytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.077709
Synaptic cleft	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.771
Pia mater	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.148
HFM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70783
Nitrous Oxide	CTD Gene-Chemical Interactions	1.0	null
PMC6704489__F3	PFOCR Pathway Figure Associations 2023	1.0	null
altered response to cns ischemic injury	MPO Gene-Phenotype Associations	1.0	null
Paraflocculus, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06909
amino	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7478-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POLR2A_GM12892_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal cell physiology	MPO Gene-Phenotype Associations	1.0	null
drug dependence	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.098512
Retinal ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.204
Prenatal Injuries	CTD Gene-Disease Associations	1.0	1.62222
MED12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1988
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.7066
Tibialis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.339
nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.78218
pro-B-lymphocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.774
neurogenesis	GeneRIF Biological Term Annotations	1.0	null
Krabbe disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.434
connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00763
Organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.723
a549	HPA Cell Line Gene Expression Profiles	-1.0	-1.42673
culture medium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.35268
UPF3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06883
PMC4711368__F4	PFOCR Pathway Figure Associations 2024	1.0	null
Corticotropic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.841
GTEx Muscle 20-29 vs 70-79	GTEx Tissue-Specific Aging Signatures	-1.0	-13.7293
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.868391
Synaptic ribbon	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.897
Adenohypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.26
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.43174
TEX45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14495
oligodendrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.65507
Quadriceps	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.256
COL16A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72263
Leukodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.89
LHX9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04555
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.44204
RREB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6995
PDLIM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.11498
Drug Hypersensitivity	CTD Gene-Disease Associations	1.0	1.13758
Biceps femoris	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.901
allele	GeneRIF Biological Term Annotations	1.0	null
GSE240027,GSE240030_1_v_2_atrx_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Fundus albipunctatus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.027
Posterolateral visual area, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.13574
regulation of tyrosine phosphorylation of STAT protein	GO Biological Process Annotations 2023	1.0	null
TKFC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45916
H1-0	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42474
Nucleus prepositus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04238
Dry eye syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.509
temporal	GeneRIF Biological Term Annotations	1.0	null
cold-induced sweating syndrome 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.236
H3K4me1_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ALKBH7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34428
FUT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71531
PER3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39762
15902281-TableS1b	GeneSigDB Published Gene Signatures	1.0	null
Basement membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.119
cervical ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.783972
Hypothalamus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.192
abnormality of the cardiovascular system	GWASdb SNP-Phenotype Associations	1.0	0.531556
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6523
HOXC10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03952
Amyotrophic lateral sclerosis 1	CTD Gene-Disease Associations	1.0	2.88009
relationship	GeneRIF Biological Term Annotations	1.0	null
amnion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.163899
H3K36me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RDH11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6907
DDX50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.68454
Dendritic tree	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.392
tf-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.962903
positive regulation of neuron projection regeneration	GO Biological Process Annotations 2025	1.0	null
JIYOYEP-2003	COSMIC Cell Line Gene Mutation Profiles	1.0	null
human amniotic epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.390799
distinct	GeneRIF Biological Term Annotations	1.0	null
TBK1_druginhibition_188_GSE53658	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.79247
Cardiomyopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
Pancreatic acinar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.864
linked	GeneRIF Biological Term Annotations	1.0	null
nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.47692
USF2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-4302	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
CCDC61	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95608
lung	HPA Tissue Protein Expression Profiles	-1.0	-0.886615
GTEx Colon 20-29 vs 50-59	GTEx Tissue-Specific Aging Signatures	-1.0	-11.5268
Cone photoreceptor outer segment	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.84
ZNF721	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89135
hsa-miR-3925-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Carotid body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.888
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1981
regulation of neuron apoptotic process	GO Biological Process Annotations 2023	1.0	null
Atopic dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.114
ACHE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76667
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.44637
Inflammation	CTD Gene-Disease Associations	1.0	2.27259
treatment	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-468	GDSC Cell Line Gene Expression Profiles	-1.0	-1.85288
testis	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
negative regulation of nervous system development	GO Biological Process Annotations 2015	1.0	null
blast cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.154982
PMC209477__F2	PFOCR Pathway Figure Associations 2023	1.0	null
tick-borne encephalitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.216332
Schizophrenia	DisGeNET Gene-Disease Associations	1.0	null
intermediate part of StrSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04851
UBTF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35634
Color blindness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.176
ARL5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04181
LMO3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64908
SRF	JASPAR Predicted Transcription Factor Targets	1.0	null
Recurrent corneal erosion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
SPAG8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38639
Keratoconus	DisGeNET Gene-Disease Associations	1.0	null
Organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.799
GSE113106_3_v_5_dnm2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Cranium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.796
Lateral geniculate nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.989
epineurium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.847065
Taenia tecta, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00294
SLC9A8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05319
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.387
THOC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11415
retina	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.07371
Nucleus lentiformis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.514
ZNF701	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63261
KLF14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86836
MTG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45037
neuroprotective	GeneRIF Biological Term Annotations	1.0	null
GSE166783_8_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Telencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.813
manner	GeneRIF Biological Term Annotations	1.0	null
RPN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69344
GABA receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.279
EFHD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.62874
GAPVD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42448
physiology	GeneRIF Biological Term Annotations	1.0	null
hypocotyl	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073306
estradiol_mus musculus_gpl4134_gse23241	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TRIM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01051
review	GeneRIF Biological Term Annotations	1.0	null
fluid	GeneRIF Biological Term Annotations	1.0	null
negative regulation of apoptotic process	GO Biological Process Annotations 2023	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A6MB-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Extracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.991
Bone marrow disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.371
Ciliary muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.358
Main olfactory bulb, inner plexiform layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10774
organelle	COMPARTMENTS Experimental Protein Localization Evidence Scores	1.0	0.233497
Zinc Sulfate	CTD Gene-Chemical Interactions	1.0	null
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98179
Distal arthrogryposis type 1A	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.286
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5258-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cytosol	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.168598
Neuron to neuron synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.274
MRPL37	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52868
GSE199899_4_v_0_diethylnitrosamine_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
creutzfeldt-jakob disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.257358
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.8339
Vitreous disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.734
Uterus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Ventral posterolateral nucleus of the thalamus, parvicellular part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11318
Sexual dysfunction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.044
SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.62
Endogenous progenitor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.325
hsa-miR-449c	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Primary visual area, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.1776
dorsolateral prefrontal cortex_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.30696
RELCH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2816
Capillary endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.013
Fetal Growth Retardation	CTD Gene-Disease Associations	1.0	1.15189
posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12981	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.04299
RAD51AP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89282
AGPAT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.39445
PMC6444804__F2	PFOCR Pathway Figure Associations 2023	1.0	null
Retinitis Pigmentosa	DisGeNET Gene-Disease Associations	1.0	null
ARHGAP21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57361
Biceps	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.31
Collagen sheet	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.596
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.139
20460173-ImmPortCytokines	GeneSigDB Published Gene Signatures	1.0	null
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087022
parkinson's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.621792
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858742
Alzheimer Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
intrinsic component of membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.094748
BTN3A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7059
monocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.168549
superficial stratum of PHyB-V	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04926
report	GeneRIF Biological Term Annotations	1.0	null
Chronic ulcer of skin	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.118
ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.693499
RAC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92728
Lung non-small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
PMC6854009__F5	PFOCR Pathway Figure Associations 2023	1.0	null
PMC12461113-HEM3-9-e70217-s002.xlsx-Table_S3-Model_4_top_50_genes_IKZF5_IKZF5	Rummagene Transcription Factor Associations 2026	1.0	null
NFIC_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
induce	GeneRIF Biological Term Annotations	1.0	null
elevated	GeneRIF Biological Term Annotations	1.0	null
Schizophrenia	HuGE Navigator Gene-Phenotype Associations	1.0	null
PMC3141289__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Charcot-Marie-Tooth disease type 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.777
H3K4me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
PMC6580171__F4	PFOCR Pathway Figure Associations 2024	1.0	null
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.49953
astrocyte development	GO Biological Process Annotations 2023	1.0	null
periventricular stratum of VTTh	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72838
Tanycyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.956
GSE95688_1_v_0_glutathione_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
ANP32D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.11712
Angioblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.503
sortilin	GeneRIF Biological Term Annotations	1.0	null
Vestibular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.608
cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.462394
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9389
rn22	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.034
SNN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34111
positive regulation of response to wounding	GO Biological Process Annotations 2025	1.0	null
abnormal blood cell morphology/development	MPO Gene-Phenotype Associations	1.0	null
Malignant astrocytoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.601
EOMES	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51252
cerebellar cortex_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.19002
non-myelinating schwann cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.188083
Lateral septal nucleus, rostral (rostroventral) part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11028
ZNF282	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64137
Masseter	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.57
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.588222
pancreatic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066537
NOA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25159
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.427636
posterior paraventricular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.27213
APEH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41587
bone deterioration disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.135755
IRF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.6317
Spinal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.412
Head and Neck squamous cell carcinoma_HNSC_TCGA-H7-A6C5-11A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4647	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
TPM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86611
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.042
TF-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.112
layer 2 of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06848
negative regulation of apoptotic process	GO Biological Process Annotations 2015	1.0	null
fascia dentata	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.427636
Viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.756
Subparafascicular nucleus, magnocellular part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27924
bone marrow	HPA Tissue Gene Expression Profiles	1.0	1.31631
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5196-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
abnormal astrocyte physiology	MGI Mouse Phenotype Associations 2023	1.0	null
orbital frontal cortex_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.17184
SPG11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.73123
respiratory system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DS-A7WH-01A-22R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FXYD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68972
ventral juxtacommissural pretectal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.31281
mRNA_KLF5_20875108	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
GSE213588_9_v_6_trametinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Sensorineural hearing loss	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.215
course	GeneRIF Biological Term Annotations	1.0	null
muscle fibre	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.938347
skeletal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.21312
nerve	GeneRIF Biological Term Annotations	1.0	null
JHUEM7	DepMap CRISPR Gene Dependency	1.0	2.1805
Cerebral lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.657
CLK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69113
TAL1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
496100595_PCx_probable Alzheimer's disease_no TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.34684
TULP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17944
Epididymis	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
limbic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.37499
HCC1806	GDSC Cell Line Gene Expression Profiles	1.0	1.55795
PMC9730246-Table_7.xlsx-LPS_Val_up-Upstream_Regulator_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
cell projection part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.806606
hsa-miR-3667-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
Whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.079
ZNF415	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93936
Disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.029
Gemini of coiled bodies	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.974
optic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.9662
RERF-LC-FM	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949959
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.871976
Thorax muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.19
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.5049
Pyramidal neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.875
OAZ2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55022
homeostasis/metabolism phenotype	MPO Gene-Phenotype Associations	1.0	null
l45	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.841
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1429
primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12890	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-1.26428
Rough endoplasmic reticulum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.203
PMC3207219__F1	PFOCR Pathway Figure Associations 2023	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A115-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC9805873-Supp_Data.xlsx-dCas9-SALL1-SDS3_PPIB_pool-id_SALL1	Rummagene Transcription Factor Associations 2026	1.0	null
Corneal epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.672
ES8	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A8ZZ-01A-11R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
angle-closure glaucoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.858
fallopiantube_5a	HPA Tissue Sample Gene Expression Profiles	1.0	0.998519
Pterygium Of Eye	DisGeNET Gene-Disease Associations	1.0	null
PMC10273736__F2	PFOCR Pathway Figure Associations 2024	1.0	null
head	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
Vastus lateralis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.052
protection	GeneRIF Biological Term Annotations	1.0	null
brl cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.253578
PMC2605487__F2	PFOCR Pathway Figure Associations 2024	1.0	null
GNPTG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34646
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81D-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
decreased neuronal precursor cell number	MGI Mouse Phenotype Associations 2023	1.0	null
Varicosity	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.727
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.029967
Brain	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.00972
ear	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.499223
Tibialis anterior	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.313
Optic lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.157
neuron part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.3896
abnormal respiratory system morphology	GWASdb SNP-Phenotype Associations	1.0	0.11902
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.517265
STAMBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16019
Prostate adenocarcinoma_PRAD_TCGA-ZG-A8QZ-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bone marrow stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.554
regulation of photoreceptor cell differentiation	GO Biological Process Annotations 2015	1.0	null
PMC11554218-ppat.1012673.s015.xlsx-Sheet_A-IRF1_Target_Gene_Lists_IRF1	Rummagene Transcription Factor Associations 2026	1.0	null
Pancreas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.619
C6orf62	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61602
evidence	GeneRIF Biological Term Annotations	1.0	null
regulation of phosphorus metabolic process	GO Biological Process Annotations 2015	1.0	null
single-organism process	GO Biological Process Annotations 2015	1.0	null
IMPACT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91616
PMC2613125__F6	PFOCR Pathway Figure Associations 2023	1.0	null
Activin A complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.775
Inflammatory bowel disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.646
UMUC11	DepMap CRISPR Gene Dependency	1.0	6.05592
ventral lateral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.63424
neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.04178
496100427_FWM_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.04534
photoreceptor	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-7290-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058061
AS3MT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76781
H3K9ac_Brain Inferior Temporal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Anterior ischemic optic neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.275
Adrenocortical carcinoma_ACC_TCGA-OR-A5JZ-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Thyroid gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
C bouton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.866
pheochromocytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.193885
myeloma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.223906
RAB11A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13226
Thioctic Acid	CTD Gene-Chemical Interactions	1.0	null
reported	GeneRIF Biological Term Annotations	1.0	null
PMC4596691__F4	PFOCR Pathway Figure Associations 2024	1.0	null
primary motor cortex (area M1, area 4)_37 pcw_M_263195015	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-2.66416
Rootlet	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.832
PMC5336271__F4	PFOCR Pathway Figure Associations 2023	1.0	null
Intestinal juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.705
RCOR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.73592
endometrium_5a	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.09049
FGF11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61369
abnormal spinal cord morphology	MPO Gene-Phenotype Associations	1.0	null
acute disseminated encephalomyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.224884
lateral geniculate body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.456442
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02744
SEPTIN7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22873
PCYT1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25427
IBA57	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38436
abnormal microglial cell morphology	MPO Gene-Phenotype Associations	1.0	null
Sympathetic ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.005
susceptibility	GeneRIF Biological Term Annotations	1.0	null
support	GeneRIF Biological Term Annotations	1.0	null
20559987-TableS1	GeneSigDB Published Gene Signatures	1.0	null
magnocellular interstitial nucleus of the posterior commissure	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.71447
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.626
SARS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58551
IL6R	Pathway Commons Protein-Protein Interactions	1.0	null
Parkinson's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.496
cell part	GO Cellular Component Annotations 2015	1.0	null
NRBF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20808
regulation of tyrosine phosphorylation of stat3 protein	GO Biological Process Annotations 2015	1.0	null
hsa-miR-198	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Cerebral palsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.564
positive regulation of tyrosine phosphorylation of stat protein	GO Biological Process Annotations 2015	1.0	null
pyramidal neuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.488276
schwann cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.86462
ST13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.93631
anterior pretectal nucleus, ventral superficial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04188
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25225
hsa-miR-146a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88424
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.624
vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.639463
Mueller cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.753
Psoas_Muscle	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	1.0	2.49226
PMC4370699__F5	PFOCR Pathway Figure Associations 2024	1.0	null
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6328
PMC6151027-12864_2018_5080_MOESM3_ESM.xlsx-E20-D3_1775_AR-DEGs-Symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
ADRA2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07334
primary auditory cortex (core)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	-1.0	-0.938636
deep white layer of SC	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1362
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26268
positive regulation of metabolic process	GO Biological Process Annotations 2015	1.0	null
cystitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.106819
initial	GeneRIF Biological Term Annotations	1.0	null
regulation of primary metabolic process	GO Biological Process Annotations 2015	1.0	null
hydrocephalus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.14329
regeneration	GeneRIF Biological Term Annotations	1.0	null
preeclamptic	GeneRIF Biological Term Annotations	1.0	null
hematopoietic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.12748
Axon terminus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.189
Macular holes	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.621
d17	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.54
Microtubule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.983
skeletal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.17269
INTS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66063
GPR25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34926
C32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.09358
abnormal apoptosis	MPO Gene-Phenotype Associations	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-AAUN-01A-12R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Precerebellar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.681
painful	GeneRIF Biological Term Annotations	1.0	null
PARD6G	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07619
hepatoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.291722
Pancreatic alpha cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.076
496100335_PCx_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.67325
regulation of phosphate metabolic process	GO Biological Process Annotations 2015	1.0	null
Odontoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.735
Spinal cord disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.563
Hippocampal pyramidal layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.874
glioblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.088855
disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.345945
POLR2AphosphoS5_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
21205295-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Axon collateral	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.198
Idiopathic fibrosing alveolitis_Lung Tissue_GSE21369	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.949
stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.10624
Interneuron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.129
Anterior chamber of the eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.314
Diaphragm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.213
GSE134316_1_v_0_mtor_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.343
ERG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23452
Cerebral hemisphere	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.809
Ocular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.169
NCIH661	Achilles Cell Line Gene Essentiality Profiles	1.0	1.22859
H3K36me3_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HT144	DepMap CRISPR Gene Dependency	1.0	8.68324
sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.37992
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.899787
axon degeneration	MPO Gene-Phenotype Associations	1.0	null
GSE160373_6_v_4_pparg_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
regulation of gene expression	GO Biological Process Annotations 2025	1.0	null
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.81703
bacterial meningitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.435275
ATF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84647
conclude	GeneRIF Biological Term Annotations	1.0	null
Nervous system disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	1.303
mantle zone of JcPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.42018
Interleukin-6 family signaling	Reactome Pathways 2024	1.0	null
SHOX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.167
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.08402
relative	GeneRIF Biological Term Annotations	1.0	null
GSE188814,GSE188854_0_v_1_wtap_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC9950457-mmc3.xlsx-GRHL2_binding_sites-RBBP8NL_GRHL2	Rummagene Transcription Factor Associations 2026	1.0	null
GPRASP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91158
H3K4me1_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Photoreceptor ribbon synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.014
GSE168401_1_v_3_harmine_human	RummaGEO Drug Perturbation Signatures	1.0	null
SDF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42023
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12775
hsa-miR-4533	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
SLR25	Achilles Cell Line Gene Essentiality Profiles	1.0	1.27208
NSC-34 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.34
Craniosynostosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.256
Neurobehavioral Manifestations	CTD Gene-Disease Associations	1.0	1.39702
LMNA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52991
PSAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70945
SC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.49399
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.01812
PMC9524569__F1	PFOCR Pathway Figure Associations 2024	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2861-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mesothelioma_MESO_TCGA-MQ-A4LV-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
P-19 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.904
STEAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3331
intermediate stratum of JcPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.31281
extracellular space	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
positive regulation of macromolecule metabolic process	GO Biological Process Annotations 2015	1.0	null
Axon cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.755
SAP25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02174
Sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.001
Extracellular vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.991
15604243-Figure1	GeneSigDB Published Gene Signatures	1.0	null
decreased motor neuron number	MGI Mouse Phenotype Associations 2023	1.0	null
GSE244940_0_v_1_edf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Hair cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.272
Corneal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.987
CCNE2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04909
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.6672
KYSE30	Achilles Cell Line Gene Essentiality Profiles	1.0	1.53537
increased cerebral infarction size	MPO Gene-Phenotype Associations	1.0	null
Optic nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.995
tonsil_8e1	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.18783
Central nervous system vasculitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
Hypocotyl	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.997
Hypoglycemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.26
Lateral geniculate body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.98
GSE145639_1_v_4_adar_human	RummaGEO Gene Perturbation Signatures	1.0	null
Fascicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.658
Neuronal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.611
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.02188
Vitelliform macular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.193
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NH-01A-11R-A27V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
F2RL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36343
GFM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96137
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873227
PRB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17076
odds	GeneRIF Biological Term Annotations	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-FB-A7DR-01A-21R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6615111__F3	PFOCR Pathway Figure Associations 2023	1.0	null
Perineuronal net	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.886
Heart Defects, Congenital	CTD Gene-Disease Associations	1.0	1.11151
Cerebral Hemorrhage	DisGeNET Gene-Phenotype Associations	1.0	null
GSE171177,GSE171181_1_v_0_e7107_human	RummaGEO Drug Perturbation Signatures	1.0	null
hsa-miR-4774-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Liver cirrhosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.86819
ZNF750	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.91298
Ebolavirus(EBOV)_1day_PBMCs_17725815_GSE8317	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.88049
Cataract	DisGeNET Gene-Disease Associations	1.0	null
Neuromyelitis optica	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.315
Primary somatosensory area, upper limb, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.23668
posteroventral (inferior) parietal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq	1.0	1.62639
CEBPA-20513432-MACROPHAGES-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
MEIS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70747
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.61156
RIOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49196
liver_d	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.61805
gyrus	GeneRIF Biological Term Annotations	1.0	null
Extracellular space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.53
Pelizaeus-Merzbacher disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.371
Olfactory nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.489
Acute Myeloid Leukemia_LAML_TCGA-AB-2912-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Intracellular anatomical structure	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
NXPE3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30472
C22orf39	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.791
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.158
strength	GeneRIF Biological Term Annotations	1.0	null
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.942643
Lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.054
Pars reticulata	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.818
H3K27ac_Duodenum Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PMC3609811__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Rosette	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.89
Amyloidosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.352
WDR37	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96508
HIF3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09506
tetanus	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.195979
LNZ308	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40365
time	GeneRIF Biological Term Annotations	1.0	null
Astrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.072
Communication disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.494
germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.072163
Presynaptic active zone cytoplasmic component	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.347
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.2945
Adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.219
nervous system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.772479
median eminence	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.195133
Endopeduncular nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.545
superficial stratum of PcPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04249
tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.654463
Dopaminergic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.268
RBM5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84485
machines	GeneRIF Biological Term Annotations	1.0	null
malignant glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.188632
Cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.36
POLR2AphosphoS5_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BMI1-23680149-NPCS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Cerebral Hemorrhage	CTD Gene-Disease Associations	1.0	2.88009
Allergic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.243
Lung	Roadmap Epigenomics Cell and Tissue Gene Expression Profiles	-1.0	-0.959572
PAPOLB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84448
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.0515
Refractive error	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.749
SHISA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4056
abnormal hematopoietic system morphology/development	MPO Gene-Phenotype Associations	1.0	null
mantle zone of StrSe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0118
TBX6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89185
Presynaptic active zone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.404
cytoskeletal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.06802
cancer	GWASdb SNP-Disease Associations	1.0	0.036021
cullin-RING ubiquitin ligase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.851
abnormal astrocyte number	MPO Gene-Phenotype Associations	1.0	null
Locus ceruleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.184
H3K36me3_ES-Bruce4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC5899024__F6	PFOCR Pathway Figure Associations 2023	1.0	null
icSARS CoV_7Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.50393
H4K20me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
corpus callosum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.393442
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.95387
CTSC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61897
particle	GeneRIF Biological Term Annotations	1.0	null
OLN-93 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.651
Childhood Glioblastoma	DisGeNET Gene-Disease Associations	1.0	null
Striated muscle cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.762
CORL23	Achilles Cell Line Gene Essentiality Profiles	1.0	2.09707
PMC2911501__F2	PFOCR Pathway Figure Associations 2023	1.0	null
basal ganglia disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.589779
H3K36me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal cell proliferation	MPO Gene-Phenotype Associations	1.0	null
Erythroleukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.948
9505BIK	DepMap CRISPR Gene Dependency	1.0	2.00037
TUHR14TKB	DepMap CRISPR Gene Dependency	1.0	2.40114
CTC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60521
il6	GeneRIF Biological Term Annotations	1.0	null
Neck	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.072
PMC8755441-mmc3.xlsx-IRF3-Up-Symbol_1_IRF3	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF862	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.118
mantle zone of PHyB-V	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.64706
GSE226285_3_v_0_nr0b1_human	RummaGEO Gene Perturbation Signatures	1.0	null
RT112	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73591
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.844425
Hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.888
Axolemma	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.624
MZF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37816
Middle cerebral artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.872
Notochord	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.171
cone-rod dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.617
Retinoblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.61
H3K36me3_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PJA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20807
Teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.961
regulation of axon regeneration	GO Biological Process Annotations 2025	1.0	null
Crus 2, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15695
PLIN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57754
POLR2A_MEL cell line_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.488
Pterygium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.803
SHP77	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57299
PMC11464544-41467_2024_52946_MOESM10_ESM.xlsx-p64-markers-Supplementary_Data_7_Marker_genes_for_schwann_cell_subclusters_TCF12	Rummagene Transcription Factor Associations 2026	1.0	null
CHAMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44451
nasal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.269867
amnion epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.190152
Progressive supranuclear palsy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.079
PMC10940914-mmc4.docx-0-PRDM16_PRDM16	Rummagene Transcription Factor Associations 2026	1.0	null
cerebral gray matter	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.800626
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A5ST-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PLCD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27922
hsa-miR-548z	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
UBALD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87046
Exocrine acinar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.962
Primary somatosensory area, trunk, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14277
LOVO	DepMap CRISPR Gene Dependency	1.0	3.33486
Tarsal bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.247
Liver hepatocellular carcinoma_LIHC_TCGA-FV-A2QR-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC364	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.29397
H2BK15ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
enzyme	GeneRIF Biological Term Annotations	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N8-A4PI-01A-21R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null