association	dataset	threshold value	standardized value
IRF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.266
mammary gland development	GO Biological Process Annotations 2025	1.0	null
response to type II interferon	GO Biological Process Annotations 2025	1.0	null
MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2335
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0158
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8952
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9024
PMC9213552-41467_2022_30858_MOESM6_ESM.xlsx-Hu-FGF4_and_NANOG-List_of_the_genes_correlated_with_both_FGF4_and_NANOG_expression_in_ICMd_cells_NANOG	Rummagene Transcription Factor Associations 2026	1.0	null
IDH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15024
RFX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9888
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.4652
NFKB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4137
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.524
ZNF140	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.2799
HOXC9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.3449
PMC6420765-12864_2019_5550_MOESM5_ESM.xlsx-D4_vs_D9-Unnamed_5_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3094
CRCGN014_HEPG2_24H:H09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.6679
regulation of peptidyl-tyrosine phosphorylation	GO Biological Process Annotations 2025	1.0	null
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.4985
ZNF449	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.7756
GSE120200,GSE127269_1_v_2_asxl1_human	RummaGEO Gene Perturbation Signatures	1.0	null
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3717
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.0268
activin receptor signaling pathway	GO Biological Process Annotations 2025	1.0	null
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7507
cell migration involved in sprouting angiogenesis	GO Biological Process Annotations 2025	1.0	null
cellular response to epidermal growth factor stimulus	GO Biological Process Annotations 2025	1.0	null
EPB41L4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0894
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6135
CRCGN013_HEPG2_24H:K03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.2599
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.3658
GATA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3093
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.713
CRCGN015_MCF10A_48H:G15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.16185
GTF2F2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22265
COX14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57156
CRCGN017_MCF10A.TP53.M_24H:I10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.71876
LIN7C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06934
RPL14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73105
GATA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1258
GSE216043_3_v_9_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CRCGN009_HEPG2_24H:L08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.0534
SSR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22671
CRCGN009_HEPG2_24H:E13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.49044
WDHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08003
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2987
ZNF263	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.4619
CRCGN015_MCF10A_48H:J22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.8456
IRF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34215
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_14_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
embryo development ending in birth or egg hatching	GO Biological Process Annotations 2025	1.0	null
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2144
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.9483
CRCGN017_MCF10A.WT.HP_24H:E10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.9515
SCG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09765
VPS25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01885
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0732
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.1008
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6113
Developmental Biology	Reactome Pathways 2024	1.0	null
ETV2::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5557
POT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37627
REXO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36915
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.152
response to epidermal growth factor	GO Biological Process Annotations 2025	1.0	null
INPP5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16012
regulation of MAPK cascade	GO Biological Process Annotations 2025	1.0	null
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9687
GSE216043_11_v_9_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CRCGN015_MCF10A.TP53.M_24H:L19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.28415
GSE216043_3_v_5_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CRCGN009_HEPG2_24H:C19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.67647
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.226
CNOT6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.03004
GINS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31882
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.4163
ZBTB32	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3025
NUP205	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59674
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.193
ZNHIT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05983
GSE216043_3_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE216043_7_v_8_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8346
SH3D21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26499
Signaling by NODAL	Reactome Pathways 2024	1.0	null
ETV7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2565
GAR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19714
BCDIN3D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36087
GSE151612_4_v_2_pracinostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CRCGN008_HEPG2_24H:L16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.8295
CREB3L4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9276
CRCGN008_HEPG2_24H:D04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.352
BATF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50943
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_15_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
GSE176008_0_v_2_azacitidine_human	RummaGEO Drug Perturbation Signatures	1.0	null
TBX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3484
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7124
SOX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6974
CRCGN017_MCF10A.TP53.M_24H:C19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.3767
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D9_vs_D15-Row_names_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
GSE205163,GSE205164_9_v_4_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE216043_11_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HOXD12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5747
PMC5682285-41467_2017_1744_MOESM8_ESM.xlsx-Change_in_both_CSDE1_KD_hESCs-gene_id_AR	Rummagene Transcription Factor Associations 2026	1.0	null
epidermal growth factor receptor signaling pathway	GO Biological Process Annotations 2025	1.0	null
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.9019
FARS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76201
CRCGN015_MCF10A_48H:G06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.07396
PAQR8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1475
SNAI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.1107
CRCGN015_HEPG2_48H:H04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.92077
CCNH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8181
NR2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.5812
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.808
TBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0303
NFYB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4068
CRCGN015_MCF10A_48H:J23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.81154
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.097
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.7948
CRCGN015_MCF10A_48H:H23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.05256
Refractive error	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.33979
SUPT3H	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2434
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.505
Crx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.6847
CRCGN015_HEPG2_48H:H06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.57126
CRCGN013_HEPG2_24H:K04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.74684
RPL6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.65988
PAX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6143
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.9061
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.4372
ATP2C1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53911
UBAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32584
Mean spheric corpuscular volume	GWAS Catalog SNP-Phenotype Associations 2025	1.0	2.75229
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.1428
STAT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6129
CRCGN015_HEPG2_48H:B20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.21796
GSE125219,GSE125221_3_v_0_arid1a_human	RummaGEO Gene Perturbation Signatures	1.0	null
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.1784
ZNF135	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.3587
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6139
TFAP4::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.2068
RAB14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66695
CRCGN014_HEPG2_24H:G02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.71873
496100524_PCx_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.02795
circulatory system development	GO Biological Process Annotations 2025	1.0	null
POLR1G	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.97724
POLR1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27432
ZNF85	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.1866
TSEN15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.17192
FAHD2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24357
CRCGN015_MCF10A_48H:G05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.131
DDX52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26195
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.3333
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.8812
E2F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4499
CEBPD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9762
cellular response to tumor necrosis factor	GO Biological Process Annotations 2025	1.0	null
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5963
negative regulation of programmed cell death	GO Biological Process Annotations 2025	1.0	null
XPO5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0234
nodal signaling pathway	GO Biological Process Annotations 2025	1.0	null
CRCGN015_HEPG2_48H:A13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.93266
CRELD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49323
GSE76425_0_v_10_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.3091
496100605_TCx_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.26067
MOS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22298
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1003
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.8987
CRCGN015_MCF10A.TP53.M_24H:P17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.49815
CDK9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33378
CRCGN008_HEPG2_24H:N23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.69965
ARPC5L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19459
TEAD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8697
496100356_TCx_probable Alzheimer's disease_TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.1326
SOX14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.6214
VAMP7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.52857
regulation of apoptotic process	GO Biological Process Annotations 2025	1.0	null
Nr2e1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.9293
Nr5a1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.5757
GSE216043_10_v_8_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
OR2B6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80657
ZBED2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24224
GSE205976,GSE205978_2_v_5_cep83_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC8481886-Table_2.xlsx-A_subsets-AF_MSC_UdRPC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.1003
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5118
CRCGN012_HEPG2_24H:D07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.0353
CRCGN015_MCF10A_48H:C01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.12709
CTTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96932
ZNF274	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4826
ZNF329	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2839
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3332
positive regulation of peptidyl-tyrosine phosphorylation	GO Biological Process Annotations 2025	1.0	null
CIAO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60054
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D9_vs_D15-gene_id_y_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
RPP38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47311
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.8052
MGA::EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4286
positive regulation of MAP kinase activity	GO Biological Process Annotations 2025	1.0	null
USP25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41176
DNAAF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32494
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6905
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4744
TBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.243
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.2758
PMC12126244-jci-135-184115-s239.xlsx-Table_3_Suppl_Fig_16-Genes_down-regulated_in_SOX9_low_tumors_744_genes_SOX9	Rummagene Transcription Factor Associations 2026	1.0	null
GNA12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70579
CHAF1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00315
CENPN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27972
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.3735
MYH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.85575
GSE176008_7_v_2_azacitidine_human	RummaGEO Drug Perturbation Signatures	1.0	null
RFX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2302
PMC3879300-pone.0084292.s002.xlsx-SPD_dataset-Gene_symbol_HOXD13	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.105
CRCGN016_MCF10A.TP53.M_24H:N14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.1174
RPL19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07444
EBF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5099
IRF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.3577
GNPDA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91501
RFX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5879
growth factor activity	GO Molecular Function Annotations 2025	1.0	null
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1109
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.3253
RRM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47146
OSBPL1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76485
GSE205163,GSE205164_5_v_8_znf808_human	RummaGEO Gene Perturbation Signatures	1.0	null
CRCGN015_MCF10A_48H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.4131
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-Row_names_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
CRCGN014_HEPG2_24H:I11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.04084
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.3648
CLSPN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45041
GSE111247_0_v_6_temozolomide_human	RummaGEO Drug Perturbation Signatures	1.0	null
CRCGN017_MCF10A.WT.HP_24H:P10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.7662
DHTKD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20826
LRRC14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31557
EN2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0336
HOXD8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0411
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.9831
PMC8016886-41419_2021_3630_MOESM6_ESM.xlsx-Sheet1-Table_S5_Differentially_expressed_genes_identified_between_HOXC6-low_and_HOXC6-high_expression_CRCs_using_TCGA_cohort_HOXC6	Rummagene Transcription Factor Associations 2026	1.0	null
PMC9950457-mmc3.xlsx-GRHL2_overexpression_DOWN-gene_GRHL2	Rummagene Transcription Factor Associations 2026	1.0	null
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5
FOSB::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2323
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.5163
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.5745
CRCGN017_MCF10A.WT.HP_24H:O04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.39342
sprouting angiogenesis	GO Biological Process Annotations 2025	1.0	null
CRCGN015_MCF10A.TP53.M_24H:N09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.1501
FTCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10835
THBS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21487
CREB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4725
regulation of MAP kinase activity	GO Biological Process Annotations 2025	1.0	null
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.1557
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.086
peptidyl-serine phosphorylation	GO Biological Process Annotations 2025	1.0	null
NR4A2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4369
OTX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7588
CRCGN011_HEPG2_24H:J18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.24125
GSE182770,GSE182784_0_v_1_chd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
TBX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1311
determination of bilateral symmetry	GO Biological Process Annotations 2025	1.0	null
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8622
DELE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53973
496100484_FWM_no dementia_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.29007
CRCGN016_MCF10A.WT.HP_24H:D04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.7094
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6215
regulation of cell communication	GO Biological Process Annotations 2025	1.0	null
H4C15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07327
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.3296
HOXC12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1369
CRCGN013_HEPG2_24H:G14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.0347
CRCGN014_HEPG2_24H:L05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.05258
NDUFA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81253
CRCGN010_HEPG2_24H:C21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.65664
GSE205163,GSE205164_3_v_4_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
positive regulation of intracellular signal transduction	GO Biological Process Annotations 2025	1.0	null
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1854
NR6A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0011
GSE156923_2_v_3_rbmx_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF831	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.12675
PMC5682285-41467_2017_1744_MOESM8_ESM.xlsx-Decreased_in_both_CSDE1_KD_hESC-gene_short_name_AR	Rummagene Transcription Factor Associations 2026	1.0	null
SLX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.96502
PPARD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.3932
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2846
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9361
Isl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.0736
TMEM209	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73153
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.8132
CRCGN017_MCF10A.WT.HP_24H:E04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.37916
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7012
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.0066
embryonic axis specification	GO Biological Process Annotations 2025	1.0	null
regulation of cell migration	GO Biological Process Annotations 2025	1.0	null
positive regulation of protein phosphorylation	GO Biological Process Annotations 2025	1.0	null
SLC20A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15825
KLF11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	114.67
positive regulation of protein serine/threonine kinase activity	GO Biological Process Annotations 2025	1.0	null
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3505
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2605
HNF4A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.7084
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.1057
CRCGN016_MCF10A.WT.HP_24H:N14	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.7428
INSM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.0833
CRCGN014_HEPG2_3H:I19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.1037
ZNF674	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41491
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0982
CRCGN011_HEPG2_24H:G02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.2614
FBXO46	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3436
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.3481
ZNF416	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.4899
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0652
CRCGN009_HEPG2_24H:C24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.91312
CENPK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19212
STXBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69372
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8532
PMC9287735-mmc8.xlsx-MI_Related_Genes-TNF_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3302
CRCGN016_MCF10A.TP53.M_24H:A16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.49895
IRF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0945
CRCGN008_HEPG2_24H:H15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.7925
POLR1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11528
DDX21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23333
CRCGN013_HEPG2_24H:L20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.00825
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.4708
MIIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.25121
CRCGN009_HEPG2_24H:C21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.72014
PGR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.566
CRCGN011_HEPG2_24H:B07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.031
TNK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.64135
negative regulation of apoptotic process	GO Biological Process Annotations 2025	1.0	null
CRCGN014_HEPG2_24H:F18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.3249
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	132.708
HOXB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2057
CRCGN017_MCF10A.WT.HP_24H:K07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.461
CRCGN008_HEPG2_24H:O13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.1096
CRCGN015_MCF10A.TP53.M_24H:M07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.2363
RAB33A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19417
BRCA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44454
CRCGN009_HEPG2_24H:L07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.8965
protein phosphorylation	GO Biological Process Annotations 2025	1.0	null
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7769
RO60	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10469
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.6006
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.1819
USF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8894
496100500_PCx_probable Alzheimer's disease_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.68974
DMRT3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3306
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1027
USP6NL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.31602
NOP53	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61833
FGFR4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4227
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3074
SLC25A17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3303
ERBB signaling pathway	GO Biological Process Annotations 2025	1.0	null
EPRS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40617
CRCGN015_MCF10A.TP53.M_24H:L09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.14755
TBX6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.89185
RNF103	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31643
496100393_HIP_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.05398
CRCGN013_HEPG2_24H:A07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.36609
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.9006
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7864
APOBEC3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3924
NR2C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.0058
NDUFA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5554
MRPL41	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01065
MCEE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.41933
KLHDC8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06498
ISYNA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22305
ZBED1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1639
ETV2::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7698
RPSA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32493
GSE205976,GSE205978_3_v_0_cep83_human	RummaGEO Gene Perturbation Signatures	1.0	null
DDAH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34827
GSE216043_10_v_0_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	140.892
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.1786
SYCP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.13939
regulation of signal transduction	GO Biological Process Annotations 2025	1.0	null
PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Unnamed_13_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
FAM168A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79749
NUCB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26505
transmembrane receptor protein serine/threonine kinase binding	GO Molecular Function Annotations 2025	1.0	null
chr3_46577748_T_A_b38	GTEx eQTL 2025	1.0	1.58393
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.5626
GSE168587,GSE168752_3_v_1_tp53_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC12186250-NIHMS2085662-supplement-3.xlsx-4111_TEAD4_peaks-Gene_Name_TEAD4	Rummagene Transcription Factor Associations 2026	1.0	null
CRCGN008_HEPG2_24H:E10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0012
CBR4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68061
RPRD1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26638
ZSCAN21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5977
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1141
CRCGN015_HEPG2_48H:B21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.0558
GSE218060_1_v_4_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	301.977
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1872
GSE242290_3_v_10_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
CRCGN009_HEPG2_24H:C20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.3924
BCAS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.33414
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.395
CRCGN008_HEPG2_24H:L15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.96475
BCL6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.0529
CRCGN016_MCF10A.WT.HP_24H:D07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.3254
GRHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8221
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6243
CRCGN015_MCF10A_48H:J24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.01865
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.7407
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.5551
response to interleukin-6	GO Biological Process Annotations 2025	1.0	null
TOX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3684
SUPT5H	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.1279
blood vessel endothelial cell migration	GO Biological Process Annotations 2025	1.0	null
ZNF528	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.2419
PMC6167382-41467_2018_6258_MOESM4_ESM.xlsx-TEAD-associated_GSC-Specific_UP-Nearest_Ensembl_GSC	Rummagene Transcription Factor Associations 2026	1.0	null
positive regulation of cell population proliferation	GO Biological Process Annotations 2025	1.0	null
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.0288
PEA15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43834
UPF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.09703
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.4415
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	102.478
SMAD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31057
ATF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65662
HOXD10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6033
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9614
PGAM5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00575
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.862
CRCGN016_MCF10A.TP53.M_24H:H08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.11485
CRCGN008_HEPG2_24H:O22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.60165
ERF::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6336
TTLL12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1415
NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.8573
PMC5682285-41467_2017_1744_MOESM8_ESM.xlsx-Decreased_in_both_CSDE1_KD_hESC-hgnc_symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
gland development	GO Biological Process Annotations 2025	1.0	null
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.1113
UPP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.84902
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.632
PCLAF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.75791
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.813
determination of left/right symmetry	GO Biological Process Annotations 2025	1.0	null
CRCGN008_HEPG2_24H:L13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.204
TFEC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8951
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.9742
PMC5682285-41467_2017_1744_MOESM8_ESM.xlsx-Change_in_both_CSDE1_KD_hESCs-gene_short_name_AR	Rummagene Transcription Factor Associations 2026	1.0	null
CRCGN015_HEPG2_48H:P24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.27434
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D9_vs_D15-gene_id_x_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.7022
TRIO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59603
CRCGN014_HEPG2_24H:H02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.09189
ELP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00673
ZEB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5173
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.40378
PIGO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.70786
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.327
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.2411
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-gene_id_x_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
GSE180525,GSE180528_1_v_3_tbx3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
RHOXF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2728
CORO1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88656
RARB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6272
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.2865
SCX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09957
RWDD2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37059
GSE176008_8_v_3_azacitidine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.2109
DLGAP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.03571
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.53609
CRCGN015_MCF10A_48H:M16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.74825
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4494
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5023
ARHGEF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17573
MITF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7319
Sex hormone-binding globulin levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.55229
PMC5918774-13287_2018_864_MOESM2_ESM.xls-sheet-AF_MSC_AND_fMSC_AND_UM51_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
ANAPC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33777
NKX2-8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3054
GID complex	CM4AI U2OS Cell Map Protein Localization Assemblies	1.0	null
VPREB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24273
PITX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5618
CRCGN008_HEPG2_24H:D09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.7955
GSE218060_2_v_4_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
cellular response to type II interferon	GO Biological Process Annotations 2025	1.0	null
activin receptor binding	GO Molecular Function Annotations 2025	1.0	null
TMEM231	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01548
MRGBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0181
tripartite regional subdivision	GO Biological Process Annotations 2025	1.0	null
496100651_FWM_probable Alzheimer's disease_TBI_83_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.26807
496100331_TCx_probable Alzheimer's disease_TBI_100+_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.05095
cellular response to growth factor stimulus	GO Biological Process Annotations 2025	1.0	null
GSE218060_7_v_4_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
496100502_TCx_dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.12556
CRCGN015_HEPG2_48H:H05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.16904
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.0145
HLA-DRB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46154
ESR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.3888
COA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32755
CREB3L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1404
S100A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.42539
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2311
peptidyl-serine modification	GO Biological Process Annotations 2025	1.0	null
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1264
PMC12186250-NIHMS2085662-supplement-3.xlsx-4111_TEAD4_peaks-Nearest_Ensembl_TEAD4	Rummagene Transcription Factor Associations 2026	1.0	null
RPP40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.03051
GSE216043_10_v_4_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
CRCGN015_MCF10A.TP53.M_24H:M01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.4111
MED26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.35214
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.5548
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.2558
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	158.71
Hoxa11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.4778
EGR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	92.8752
FOXN3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4589
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.7639
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.9515
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1901
PITX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.406
CRCGN015_MCF10A.TP53.M_24H:J24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.0021
ZNF627	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07179
cellular response to hepatocyte growth factor stimulus	GO Biological Process Annotations 2025	1.0	null
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.6866
CRCGN015_MCF10A.TP53.M_24H:N02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.09602
positive regulation of MAPK cascade	GO Biological Process Annotations 2025	1.0	null
SHOC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77475
CRCGN017_MCF10A.WT.HP_24H:L13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.03225
GSE99687_0_v_1_smad5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
CRCGN016_MCF10A.TP53.M_24H:I12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-3.343
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9305
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.0803
ISL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3744
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1302
HOXC11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.804
EDEM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.56139
left/right pattern formation	GO Biological Process Annotations 2025	1.0	null
Regulation of signaling by NODAL	Reactome Pathways 2024	1.0	null
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.04314
KIAA1191	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09052
response to hepatocyte growth factor	GO Biological Process Annotations 2025	1.0	null
anterior/posterior axis specification, embryo	GO Biological Process Annotations 2025	1.0	null
regulation of cell population proliferation	GO Biological Process Annotations 2025	1.0	null
496100510_HIP_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.26103
DIP2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13573
STAT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0488
SPPL2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00507
HOXB9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.714
GRHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8496
496100553_TCx_probable Alzheimer's disease_TBI_78_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.03619
GSE176008_8_v_1_azacitidine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.8545
CRCGN011_HEPG2_24H:K08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.80465
UQCRQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4994
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.6892
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.5111
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.0459
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.771
PMC5682285-41467_2017_1744_MOESM8_ESM.xlsx-Decreased_in_both_CSDE1_KD_hESC-gene_id_AR	Rummagene Transcription Factor Associations 2026	1.0	null
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2823
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	208.536
SSX2IP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25439
CLINT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09283
regulation of endothelial cell migration	GO Biological Process Annotations 2025	1.0	null
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9465
CRCGN013_HEPG2_24H:K05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.23179
response to fibroblast growth factor	GO Biological Process Annotations 2025	1.0	null
GSC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6878
OTX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6025
CFAP119	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4175
NIFK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2431
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9998
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.0999
CRCGN009_HEPG2_24H:H01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.00144
GSE133087_1_v_0_metformin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.6695
ETV5::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.1749
LHFPL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99068
chr3_46576012_T_C_b38	GTEx eQTL 2025	1.0	1.98179
HSF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3578
TFE3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.68
CRCGN015_MCF10A_48H:O11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.69915
heart development	GO Biological Process Annotations 2025	1.0	null
TNKS1BP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54936
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-gene_id_y_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
MYL12B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06955
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.3228
SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1145
NKX2-4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1781
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0061
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.134
CRCGN008_HEPG2_24H:I19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.3103
496100402_FWM_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.00168
Metabolite levels	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.552288
SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.4083
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1732
CRCGN016_MCF10A.TP53.M_24H:C07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.5981
GSE243199_1_v_0_paclitaxel_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Glaucoma (primary open-angle)	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.639794
ZCCHC14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.35891
EBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.1078
RFX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0079
TBX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0918
CRCGN011_HEPG2_24H:I19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.2422
POLB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18367
DNTTIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70118
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.309
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0248
ZNF75A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.35332
NFKB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.926
receptor ligand activity	GO Molecular Function Annotations 2025	1.0	null
PAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.513
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.986
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.4569
EGR4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	93.7271
CRCGN011_HEPG2_24H:G09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.02335
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.5597
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.751
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.598
CRCGN015_HEPG2_48H:P23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.17464
RAB20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3364
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.5704
FAM167B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48749
PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Genes_significantly_differentially_expressed_between_H9_and_GATA6_4ins_at_day_3_in_RNA-seq_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.3035
CRCGN017_MCF10A.TP53.M_24H:P24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.24862
CRCGN016_MCF10A.TP53.M_24H:P24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.55795
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8013
TFDP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01975
TDGF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.03151
PMC5577301-in-17-237-s001.xls-AR_upregulated_DEGs-Heart_GSE2596_GENE_AR	Rummagene Transcription Factor Associations 2026	1.0	null
KHNYN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51317
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7914
ZBTB18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8403
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	111.014
NR1H2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4
CRCGN015_HEPG2_48H:H19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.63196
anterior/posterior pattern specification	GO Biological Process Annotations 2025	1.0	null
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	141.654
ATP5PD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08071
COPS6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45468
PSMD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87761
PI4KB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24686
NSDHL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02573
CRCGN015_MCF10A.TP53.M_24H:J23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.09555
SGPP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13991
response to tumor necrosis factor	GO Biological Process Annotations 2025	1.0	null
RBPJ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5641
CRCGN011_HEPG2_24H:K07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.4643
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	147.663
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6084
TDGF1P3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80311
TIMELESS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12313
RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.7411
CRCGN015_MCF10A.WT.HP_24H:P24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.88644
496100346_FWM_no dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.04922
PTTG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48686
MDH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43155
496100292_PCx_no dementia_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.19424
CRCGN015_MCF10A_48H:P05	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.5337
STX17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.18638
MFGE8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50723
cellular response to interleukin-6	GO Biological Process Annotations 2025	1.0	null
CRCGN014_HEPG2_24H:G24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.34476
HOXD11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6258
ATOSB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18519
CRCGN011_HEPG2_24H:I02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.00605
NR1H4::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.0888
E2F8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2043
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.9557
B2M	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27912
cellular response to fibroblast growth factor stimulus	GO Biological Process Annotations 2025	1.0	null
anterior/posterior axis specification	GO Biological Process Annotations 2025	1.0	null
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.3275
NKX6-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.6156
GSE226355,GSE226357_1_v_4_ybx1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6869
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.6537
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6418
GSE143782_6_v_1_calcitriol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HIC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7138
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5311
IK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.29178
496100320_PCx_no dementia_TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.98459
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.479
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1033
RNPS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97338
ZIC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08761
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7687
496100617_TCx_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.23497
ZKSCAN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2078
GSE216043_10_v_9_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
membrane raft	GO Cellular Component Annotations 2025	1.0	null
CRCGN013_HEPG2_24H:C19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.08711
CRCGN017_MCF10A.TP53.M_24H:E08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.2753
E2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4819
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4247
CRCGN014_HEPG2_3H:L18	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.38522
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.86
HOXC10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9455
ZNF75D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.8437
496100656_HIP_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.08116
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.8725
CRCGN010_HEPG2_24H:C19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.15957
CLOCK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2439
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3276
CRCGN017_MCF10A.WT.HP_24H:O12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.2893
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2893
CRCGN009_HEPG2_24H:A16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.56935
IPO7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99898
HEG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36046
CRCGN014_HEPG2_3H:D07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.05249
CRCGN008_HEPG2_24H:I03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.9667
ZNF341	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3344
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0623
positive regulation of cell motility	GO Biological Process Annotations 2025	1.0	null
MAFK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4469
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9437
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.5928
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	77.3977
CRCGN012_HEPG2_24H:C19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.11473
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.3056
NPAS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26506
GIGYF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47627
HLA-C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02176
positive regulation of cellular process	GO Biological Process Annotations 2025	1.0	null
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2815
GPATCH8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1285
cellular response to cytokine stimulus	GO Biological Process Annotations 2025	1.0	null
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8872
SARNP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59848
MRPS28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26865
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.9923
positive regulation of cell migration	GO Biological Process Annotations 2025	1.0	null
PMC5682285-41467_2017_1744_MOESM8_ESM.xlsx-Change_in_both_CSDE1_KD_hESCs-hgnc_symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
RREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	154.273
PSMA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44909
PRIM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82182
positive regulation of endothelial cell migration	GO Biological Process Annotations 2025	1.0	null
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.6007
CRCGN015_MCF10A.WT.HP_24H:E02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.0726
STAT1::STAT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.1677
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5358
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	158.457
TMEM106A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18725
CRCGN016_MCF10A.TP53.M_24H:A22	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.321
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9519
CRCGN010_HEPG2_24H:C20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.94338
VPS37B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29379
PNISR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73249
NEDD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19907
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.3447
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4271
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.281