association	dataset	threshold value	standardized value
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
Retrosplenial area, lateral agranular part, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.06752
vinblastine-7517	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
minocycline-5077	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GLUD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77879
RAD21_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MY-A5BF-01A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hormone receptor binding	GO Molecular Function Annotations 2025	1.0	null
Parapyramidal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.67314
sulfadiazine-5098	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KM12	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.094
Liver Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.11877
Intrinsic component of Golgi membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.71
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04496
frontal pole, right, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.17746
Ventral posteromedial nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.84706
VZ in midlateral extrastriate cortex (area 19)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.25476
abnormal lactotroph morphology	MPO Gene-Phenotype Associations	1.0	null
CTCF_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of lung_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
submammillothalamic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.60362
superficial stratum of r6BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15459
p2 portion of the parabrachial pigmented nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15817
CTCF_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FJ-A3Z9-01A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Perturb_6629_KO_TEAD1_SRP315348	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-10.2934
BRD-K53110645	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18754
NKX2-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3783
cingulate gyrus, retrosplenial part, right, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.35184
NCIH727	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
loracarbef-5073	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8405-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Isolated Growth Hormone Deficiency	DisGeNET Gene-Disease Associations	1.0	null
superficial stratum of r7BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.15779
nizatidine-6305	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mantle zone of RMa	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.73543
SIRT1_KO_GSE28790_47_mouse_brain (3 mo)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
ZC3H11A_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MKN7	GDSC Cell Line Gene Expression Profiles	-1.0	-2.56562
TE-15	GDSC Cell Line Gene Expression Profiles	-1.0	-1.55958
NCI-H2342	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hormone activity	GO Molecular Function Annotations 2025	1.0	null
BRD-K89161054	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28702
CTCF_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K85359206	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11162
DOTC24510	DepMap CRISPR Gene Dependency	1.0	2.10354
primary somatosensory cortex (area S1, areas 3,1,2)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.50193
CTCF_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
USP2_KO_GDS5079_25_mouse_kidney	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64461
lateral mammillary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09823
Prolactinoma	CTD Gene-Disease Associations	1.0	1.19868
BRD-K04875192	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07458
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lateral (dentate) cerebellar nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10808
BRD-K56470219	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31064
H3K9me3_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
blood vessel endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.101963
periventricular stratum of m2Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.3415
metrifonate-5989	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
guanabenz-5703	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SFSWAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43299
CTCF_GM12867_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12865_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.902003
Hypogonadotropic Hypogonadism	DisGeNET Gene-Disease Associations	1.0	null
PMC8528285-pbio.3001085.s010.xlsx-Fig_7E-MAX_WT_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
CTCF_MCF-7_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
colon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057648
CRO-AP2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
COR-L279	GDSC Cell Line Gene Expression Profiles	1.0	1.82884
Mammary Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	2.88009
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040504
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.993309
MZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.08043
HCC1143	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50822
CTCF_pancreas_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Infertility, Male	CTD Gene-Disease Associations	1.0	1.36933
Hypogonadism	CTD Gene-Disease Associations	1.0	1.12082
primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.58953
abnormal brain morphology	MPO Gene-Phenotype Associations	1.0	null
jar cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.480091
g/g	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.66
sirolimus-2702	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GM97	BioGPS Cell Line Gene Expression Profiles	1.0	1.38219
RAD21_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Piriform-amygdalar area, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05237
nipecotic acid-7296	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72629
amygdaloid complex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05468
IC-86621-7543	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
alitretinoin_homo sapiens_gpl6480_gse43090	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EVSAT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39559
Hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.181
Infertility, Female	CTD Gene-Disease Associations	1.0	1.18193
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34539
interstitial nucleus of Cajal, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.48116
IZ in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.42514
U-2-OS	GDSC Cell Line Gene Expression Profiles	-1.0	-1.91918
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DR-A0ZL-01A-11R-A10U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_B cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
positive regulation of receptor signaling pathway via STAT	GO Biological Process Annotations 2025	1.0	null
BRD-K95153427	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26296
vagina	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.216126
inferolateral temporal cortex (area TEv, area 20)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12561
bone	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.23083
CTCF_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
PMC5817105-thnov08p0972s2.xls-SIX3-GeneName_SIX3	Rummagene Transcription Factor Associations 2026	1.0	null
VZ in frontal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.889332
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cellular response to growth hormone stimulus	GO Biological Process Annotations 2023	1.0	null
CTCF_spleen_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.239007
KU-812 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.738
NALM-6	COSMIC Cell Line Gene Mutation Profiles	1.0	null
layer 2 of InsCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.28895
JHOS4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.89176
growth hormone receptor binding	GO Molecular Function Annotations 2023	1.0	null
CTCF_cardiac muscle cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JHUEM1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.73612
CORL311	DepMap CRISPR Gene Dependency	1.0	2.06036
withaferin A-3819	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
metolazone-6292	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cleft lip	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.303059
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.34983
Liver Diseases	CTD Gene-Disease Associations	1.0	1.1122
Endospore external encapsulating structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.814
hsa-miR-4477a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
BRD-K45860594	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45578
KKU100	DepMap CRISPR Gene Dependency	1.0	2.79965
phenazopyridine-6100	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K36me3_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HPAF-II	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13991
delayed sexual maturation	MPO Gene-Phenotype Associations	1.0	null
Mandible	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.961
EFE184	CCLE Cell Line Gene Expression Profiles	1.0	1.40768
parvocellular part of r8LRt	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.08698
BRAF_drug inhibition_GSE42872_368_human_A375	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Chloroplast ribulose bisphosphate carboxylase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.166
Nemaline Myopathy_Gastrocnemius Muscle_GSE3384	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.39641
ventral pallidum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.18191
SP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.02704
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A2LA-01A-11R-A18C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsolateral prefrontal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.36027
Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3777-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
CTCF_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lymphoid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06229
X, left, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.03365
BRD-K69294714	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.92011
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5885-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059586
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
principal sensory nucleus of trigeminal nerve	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.906067
mastocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.298371
Polar tube	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.779
r8 part of the paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.20444
OVISE	CCLE Cell Line Gene CNV Profiles	1.0	1.88505
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LS513	CCLE Cell Line Gene Expression Profiles	1.0	1.51775
dorsolateral part of Lat	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10095
BRD-K74452256	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.1987
positive regulation of tyrosine phosphorylation of STAT protein	GO Biological Process Annotations 2023	1.0	null
dipivefrine-6766	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
flunisolide-4303	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
tomatidine-5808	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EZH2_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CRCGN016_MCF10A.WT.HP_24H:D04	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.67091
CA4 field, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.18042
rosiglitazone-6950	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CRCGN014_HEPG2_24H:A20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.87411
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
BRD-K75584297	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14213
INSM1_lack of the seven N-terminal amino acids_GDS5066_404_mouse_pituitary glands	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
orbital frontal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.906697
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.211597
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-2.03936
Mammary Neoplasms	DisGeNET Gene-Phenotype Associations	1.0	null
guanethidine-3171	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KYSE-270	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.186397
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Liver Cirrhosis, Experimental	CTD Gene-Disease Associations	1.0	1.21011
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST18-Supplementary_Data_18_Gene_burden_for_deletions_by_subtype_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
lateropallial prepiriform area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.14796
felbinac-5700	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2747
vestibular nuclei, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.83602
mediodorsal nucleus of thalamus_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12872
BRD-K82517280	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07162
r9 part of the inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.09085
ventrolateral prefrontal cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.943982
PCI-38	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_G1E-ER4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11759
CTCF-27219007-CHIP-SEQ-BCELLS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC8755441-mmc3.xlsx-IRF7-Up-ezh2_IRF7	Rummagene Transcription Factor Associations 2026	1.0	null
colonic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061198
large intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055958
BRD-K22416922	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06761
Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-A6HZ-11A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hormone activity	GO Molecular Function Annotations 2023	1.0	null
procainamide-4602	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K27me3_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.340395
CTCF_GM12866_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
receptor ligand activity	GO Molecular Function Annotations 2025	1.0	null
BRD-K59626557	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24596
endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.107273
rottlerin-825	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4703-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SKG-IIIa	GDSC Cell Line Gene Expression Profiles	-1.0	-1.55579
heart	GTEx Tissue Gene Expression Profiles	-1.0	-1.05657
SMC3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SMARCAL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17038
r7 part of parapyramidal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.15779
CTCF_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COLO668	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84024
APOD_KO_GDS3913_487_mouse_Cerebellum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
ethanol_mus musculus_gpl6105 _gds3703	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
D-283MED	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A6MB-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054951
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A216-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
rectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064658
SMC3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-4775	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
Glanders	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.191
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.3349
periodontal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.135768
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.1786
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5402-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.163938
SW1990	DepMap CRISPR Gene Dependency	1.0	2.62955
H3K36me3_testis_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU869	CCLE Cell Line Gene CNV Profiles	1.0	1.63569
imatinib_homo sapiens_gpl96_gds3044	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IZ in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.84416
superficial stratum of r8BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.48104
fetus	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
BRD-K50036850	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3032
BRD-K09749233	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06338
intermediate stratum of r3Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.17443
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Entorhinal area, medial part, ventral zone, layer 2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.70076
CTCF_fibroblast of skin of abdomen_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
medial habenular nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.74872
primary somatosensory cortex (area S1, areas 3,1,2)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.84403
abnormal somatotroph morphology	MPO Gene-Phenotype Associations	1.0	null
Endopiriform nucleus, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04713
11-deoxy-16,16-dimethylprostaglandin E2-7514	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K9me3_G1E-ER4_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.550901
H3K4me2_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
MOLT-16	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NFIA_Deficiency_GDS2775_639_mouse_Embryonic brains (at E18)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
PATU8988T	DepMap CRISPR Gene Dependency	1.0	2.4891
CHP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45852
respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.055492
Infralimbic cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.691
sisomicin-4132	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Squamous Cell Carcinoma Of Skin	DisGeNET Gene-Disease Associations	1.0	null
superficial stratum of m1B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.29657
CUX1-19635798-MULTIPLE-CANCER-TYPES-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
H3K27me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4376
BRD-K09160804	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05077
BRD-K94011376	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08038
intestinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.64529
Chorionic villus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.616
primary auditory cortex (core)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.04843
Height	GWAS Catalog SNP-Phenotype Associations 2025	1.0	2.1301
pterigoid muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.86721
SNU840	CCLE Cell Line Gene Expression Profiles	-1.0	-1.66791
BRD-K64418159	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01317
CTCF_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bhk-21 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.2559
CTCF_astrocyte of the spinal cord_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
layer IIIu of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.41366
H3K9me3_erythroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
COLO-684	GDSC Cell Line Gene Expression Profiles	1.0	2.06624
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.679433
Rigor - Temperature-Associated Observation	DisGeNET Gene-Phenotype Associations	1.0	null
substantia nigra compacta, m1 part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00438
184A1N4	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.795991
Isolated Lutropin Deficiency (Disorder)	DisGeNET Gene-Disease Associations	1.0	null
CTCF_medulloblastoma_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Mitochondrial isocitrate dehydrogenase complex (NAD+)	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.797
BRD-K75844451	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01694
embryonic stem no feeder	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.4935
lateral reticular nucleus (principal part)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.918944
BICR16	DepMap CRISPR Gene Dependency	1.0	2.38254
CTCF_GM12873_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Gestational trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.136
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.2
NUGC4	CCLE Cell Line Gene CNV Profiles	1.0	1.82716
Bed nuclei of the stria terminalis, anterior division, rhomboid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.82989
PATU8988T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54512
CA3 field, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.09129
Glucosidase II complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.664
cementum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.28887
BRD-K92180676	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42923
Fatty Liver	CTD Gene-Disease Associations	1.0	1.14473
AP-2rep	MotifMap Predicted Transcription Factor Targets	1.0	null
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052623
Placenta	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	2.2603
HCC2218	CCLE Cell Line Gene CNV Profiles	1.0	1.60818
BRD-K49704392	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45897
KMS12BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.94201
TIA1_KO_GSE54418_265_mouse_midbrain	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
CTCF_fibroblast of lung_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tooth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.483596
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832839
layer 3 of LPrP cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23939
EWSR1	ChEA Transcription Factor Targets	1.0	null
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.235457
CHAGOK1	CCLE Cell Line Gene Expression Profiles	1.0	1.59186
Hyperkinesis	CTD Gene-Disease Associations	1.0	1.07093
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal gland morphology	MPO Gene-Phenotype Associations	1.0	null
CW9019	DepMap CRISPR Gene Dependency	1.0	13.0561
cisplatin_homo sapiens_gpl96_gse15308	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K23701005	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.83419
BRD-K74515526	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.6166
BRD-K30377659	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19547
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.83685
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054951
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.07149
growth hormone receptor signaling pathway	GO Biological Process Annotations 2025	1.0	null
5114445-901	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
p3 portion of parabrachial pigmented nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.35629
RAD21_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
clonidine-4478	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
m2 part of substantia nigra compacta	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00656
positive regulation of receptor signaling pathway via STAT	GO Biological Process Annotations 2023	1.0	null
hormone activity	GO Molecular Function Annotations 2015	1.0	null
heart	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.088585
Adipogenesis(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.229299
ctnnb1_21565795_adrenocortical_adenomas_lof_mouse_gpl570_gds3912	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-1.15357
deep layers of olfactory entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.933718
CTCF_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Extravillous cytotrophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.717
18812457-Table3	GeneSigDB Published Gene Signatures	1.0	null
COLO792	CCLE Cell Line Gene Expression Profiles	1.0	1.91152
gastrointestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058607
layer 2 of LPrP cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.45192
CRCGN008_HEPG2_24H:B11	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.05344
CTCF_thymus_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Isolated growth hormone deficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.95
HCC2998	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.59714
GSE245778_1_v_0_runx1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.066643
CUX1-19635798-MULTIPLE HUMAN CANCER CELL TYPES-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
SJCRH30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942631
PMC10040389-mmc7.xlsx-URs_IMIDs_SP1_6-UR_SP1	Rummagene Transcription Factor Associations 2026	1.0	null
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.95227
primary auditory cortex (core)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.12709
midline nuclear complex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.853993
LB1047-RCC	GDSC Cell Line Gene Expression Profiles	-1.0	-2.03034
SIMA	DepMap CRISPR Gene Dependency	1.0	4.28114
ventrolateral prefrontal cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.07424
RVH421	DepMap CRISPR Gene Dependency	1.0	2.27606
CTCF_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
layer VI of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.852067
RNASEH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95822
alprostadil-4179	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CRCGN015_HEPG2_48H:J10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.39704
denatonium benzoate-5061	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
alimemazine-2736	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K75900952	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03295
chlorcyclizine-4546	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
subparafascicular nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.60874
metyrapone-6447	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K27me3_G1E-ER4_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_ECC-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
meclofenoxate-2546	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_epithelial cell of proximal tubule_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_Skeletal Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07221
CTCF_HeLa-S3_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sulfaguanidine-4257	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Angioedema	DisGeNET Gene-Disease Associations	1.0	null
Palpus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.782
superficial stratum of r8BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.20399
posteroventral (inferior) parietal cortex_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.42269
22RV1	DepMap CRISPR Gene Dependency	1.0	2.39963
CRCGN014_HEPG2_3H:B08	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.62522
Sheehan Syndrome	DisGeNET Gene-Disease Associations	1.0	null
HCC44	CCLE Cell Line Gene Expression Profiles	1.0	1.67203
Trophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.72
oxedrine-6798	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MOLT-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
superficial stratum of Mam	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09776
EM2	CCLE Cell Line Gene CNV Profiles	1.0	1.34682
nitrendipine-5405	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
enterocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.4914
EBF1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
m1 part of paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.46524
CTCF_embryonic fibroblast_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PDE10A_KO_GDS4542_292_mouse_hippocampus	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
abnormal pituitary gland size	MPO Gene-Phenotype Associations	1.0	null
Megagametophyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.824
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-UC-A7PD-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_keratinocyte_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
BACH1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Noonan syndrome 10	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.379
Hypopituitarism	DisGeNET Gene-Disease Associations	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-IZ-8196-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superficial stratum of VPrP	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.06904
Dentate nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1049
ZC3H11A_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
anterior digastric muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.34266
anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01485
delavirdine	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.65314
BRD-K35080107	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07002
SG in caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.18463
WRNIP1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SRY-25088423-EMBRYONIC GONADS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
Leukemialymphoblastic(MOLT-4)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.842391
diethylcarbamazine-5066	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TIA1_KO_GSE54418_264_mouse_cerebellum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
chr17_63918780_A_C_b38	GTEx eQTL 2025	1.0	1.48904
Nucleus of the trapezoid body	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.13649
primary motor cortex (area M1, area 4)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.885241
CTCF_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r3 part of the trigeminal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.07656
BRD-K07456098	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01332
PMC11949941-DataSheet1.pdf-52-ELK4_ELK4	Rummagene Transcription Factor Associations 2026	1.0	null
Female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CTCF_GM20000_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bed nuclei of the stria terminalis, anterior division, juxtacapsular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33312
Host extracellular space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.008
SHSYSY-RA	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.06569
esculin-3052	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_CH12.LX_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K10196668	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.80168
CALU-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2866
lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062891
BRD-K40732885	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.52613
CRCGN016_MCF10A.TP53.M_24H:N19	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.0078
BRD-K23975481	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1065
myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065459
CRCGN015_HEPG2_48H:G13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.58781
CST complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.821
VZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.869604
CTCF_brain microvascular endothelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
p3 portion of paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.72653
anterior (rostral) cingulate (medial prefrontal) cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.929866
TCF7L2	ENCODE Transcription Factor Targets	1.0	null
ionomycin-882	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Orbital area, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12429
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.182159
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5085-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_WI38_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cleft palate	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.237357
CTCF_GM19238_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
molecular_function	GO Molecular Function Annotations 2015	1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826719
Hypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.891
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.552888
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3217
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13991
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.860386
znf217_22593193_mda_mb_231_gof_human_gpl570_gse35511	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.552393
r5 part of ventral lateral lemniscal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04138
SNU626	CCLE Cell Line Gene Expression Profiles	1.0	1.4732
minaprine-4230	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SNU738	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68207
Glioblastoma	DisGeNET Gene-Disease Associations	1.0	null
SUDHL8	CCLE Cell Line Gene Expression Profiles	1.0	1.66978
BRD-K63800697	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.17869
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054384
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5467-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
YIPF6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26022
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38873
cytokine receptor binding	GO Molecular Function Annotations 2025	1.0	null
stratum lacunosum-moleculare of caudal CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.5638
peripheral portion of GPi	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.858831
Placenta disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.231
CTCF_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12869_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4995-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
haloperidol_mus musculus_gpl339_gds2531	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
abnormal liver size	MPO Gene-Phenotype Associations	1.0	null
CTCF-27219007-CHIP-SEQ-ERYTHROID-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
paraventricular nucleus of the hypothalamus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.95661
jejunum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.224645
inner portion of medial ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.965401
CTCF_fibroblast of upper leg skin_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of the aortic adventitia_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HCT116_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUM149PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.1388
BRD-K51753035	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.84833
CTCF_fibroblast of pedal digit skin_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDAC6	ENCODE Transcription Factor Targets	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7584-01A-11R-2139-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4976-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K59164282	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21843
Bed nuclei of the stria terminalis, anterior division, oval nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00332
r1 part of lateral pontine nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.08112
Supratrigeminal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.52592
RAD21_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endocrine/exocrine gland phenotype	MPO Gene-Phenotype Associations	1.0	null
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17662
BRD-K49875070	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05535
acetylsalicylsalicylic acid-2061	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SREBF2	JASPAR Predicted Transcription Factor Targets	1.0	null
multiform (lateral) division of MD	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.25906
MAFK_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K65196043	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18518
anterior pretectal nucleus, ventral superficial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.67241
choroid plexus of the fourth ventricle	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.89356
Labial palp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.902
Dysphonia	DisGeNET Gene-Phenotype Associations	1.0	null
RAD21_MEL cell line_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Abnormalities, Drug-Induced	CTD Gene-Disease Associations	1.0	1.27316
CTCF_HepG2_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regulation of tyrosine phosphorylation of STAT protein	GO Biological Process Annotations 2023	1.0	null
LN428	CCLE Cell Line Gene Expression Profiles	1.0	1.49011
bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.478289
Kowarski Syndrome	DisGeNET Gene-Disease Associations	1.0	null
pharmacogenomic	GAD High Level Gene-Disease Associations	1.0	0.293278
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J8-06A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
growth factor activity	GO Molecular Function Annotations 2025	1.0	null
CTCF_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
1,3-beta-D-glucan synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.72
cellular response to growth hormone stimulus	GO Biological Process Annotations 2025	1.0	null
CRCGN015_MCF10A.TP53.M_24H:N21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.41563
Anorexia	CTD Gene-Disease Associations	1.0	1.11081
USF2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MOLT3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.15736
20140255-TableS2	GeneSigDB Published Gene Signatures	1.0	null
intermediate portion of DFC (area 9/46)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.33783
BRD-K13330525	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2534
Neurotoxicity Syndromes	CTD Gene-Disease Associations	1.0	1.07947
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04496
BRD-K87167435	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.63848
CRCGN010_HEPG2_24H:O03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.40211
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.357
BRD-K73689413	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.23925
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
fenbufen-3618	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01264
Leukemogenesis	DisGeNET Gene-Disease Associations	1.0	null
BRD-K04712840	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00047
intermediate stratum of Mam	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.2449
CTCF_testis_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SIRT1_Deficiency_GDS4895_316_mouse_Brain	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
CORL95	CCLE Cell Line Gene Expression Profiles	-1.0	-2.04558
BRD-K53797069	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21659
primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.999951
amygdaloid complex_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.39531
primary auditory cortex (core)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.865596
inner CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.78742
CTCF_BE2C_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hut-78 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.388535
angular gyrus, left, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.965857
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.14335
Atrophy	CTD Gene-Disease Associations	1.0	1.07163
ZC3H11A	ENCODE Transcription Factor Targets	1.0	null
Crus I, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.20842
ventropallial prepiriform area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09463
GSK3B_knockdown_209_GSE35351	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.45643
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055966
BRD-K27363274	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.82565
CTCF_MEL cell line_mm9_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bradycardia	CTD Gene-Disease Associations	1.0	1.166
intermediate stratum of r4Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72817
abnormal white adipose tissue morphology	MPO Gene-Phenotype Associations	1.0	null
Retrosplenial area, ventral part, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10331
SPI1-20176806-THIOMACROPHAGE-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
CTCF_cardiac muscle cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ERBB2_knockdown_231_GSE8373	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.65482
BRD-K88936403	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06732
SMAD2/3-21741376-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
CRCGN014_HEPG2_3H:P06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.63432
SK-MES-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
CTCF_fibroblast of pedal digit skin_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IV, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.898068
memantine-7354	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SK-MES-1	GDSC Cell Line Gene Expression Profiles	1.0	2.11796
central gray of the pons, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.24245
magnocellular division of VA	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.35574
BRD-K58310485	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03515
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
BeWo cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.245
Encephalomyelitis, Autoimmune, Experimental	CTD Gene-Disease Associations	1.0	1.22177
BRD-K05796207	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34438
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066195
VIIIA, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.51674
fenbufen-4743	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ERVK3-1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50502
GSE135400_2_v_0_kdm1b_human	RummaGEO Gene Perturbation Signatures	1.0	null
Choriocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.328
H3K27me3_G1E-ER4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Sporoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.781
BRD-K54510565	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49517
BRD-K52225720	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01888
regulation of receptor signaling pathway via JAK-STAT	GO Biological Process Annotations 2025	1.0	null
CTCF_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59763
fluphenazine-5597	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
parabigeminal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.65989
p1 part of the substantia nigra reticulata	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3622
hypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.38665
METTL22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5937
intermediate stratum of RMa	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.56391
superficial stratum of m2ADL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03134
r2 part of trigeminal transition zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72817
BRD-K79402882	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3455
CTCF_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regulation of receptor signaling pathway via JAK-STAT	GO Biological Process Annotations 2023	1.0	null
DHRS7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60279
Edinger-Westphal nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.90747
e2f1_21245101_mmtv-myc_lof_mouse_gpl8321_gds4094	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.273538
CTCF_Caco-2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
precentral gyrus, right, bank of the precentral sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.982146
liminal reticular formation of m2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.40655
p1 portion of the paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.57739
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SARM_KO_GDS4842_412_mouse_brain	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
ZNF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.904
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.53267
Hypopituitarism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.762
A2058	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.221
blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056547
layer 6b of PaS	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19774
BCL11A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0148
chorionic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.664368
Tfcp2l1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.0238
SIHA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38766
Mitochondrial tricarboxylic acid cycle enzyme complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.725
Body Height	DisGeNET Gene-Phenotype Associations	1.0	null
BRD-K55884477	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.22255
AOB, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10411
NCIH2444	CCLE Cell Line Gene Expression Profiles	1.0	1.6804
PRELID3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11171
BRD-A03182941	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24673
colonic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076694
intermediate stratum of r2Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.34266
mammillary part of THyB	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.00775
PSS131R	DepMap CRISPR Gene Dependency	1.0	2.55486
BRD-K29200961	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10624
EM-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K94303022	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09201
CTCF_GM12874_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kallmann Syndrome	DisGeNET Gene-Disease Associations	1.0	null
KG-1A cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.616
BRD-K84210390	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22959
reuniens nucleus (medioventral nucleus) of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.32243
JUN	JASPAR Predicted Transcription Factor Targets	1.0	null
CTCF_olfactory bulb_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intermediate stratum of r4Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04186
fluphenazine-3194	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mammillary area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.00568
CTCF_cardiac fibroblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organism form	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
superficial stratum of r2Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.39057
UBE2K	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62004
BRD-K95422706	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29062
BRD-K74236049	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29901
TCF7L2_HCT116_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1966
layer V of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.862724
MCF7	CCLE Cell Line Gene CNV Profiles	1.0	2.4593
decreased lactotroph cell number	MPO Gene-Phenotype Associations	1.0	null
CRCGN015_MCF10A.TP53.M_24H:O07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.44312
Lateral septal nucleus, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00905
BRD-K52083268	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42868
WDR89	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19429
ventrolateral prefrontal cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12666
levomepromazine-7399	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_A549_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSK3B_knockdown_202_GDS4305	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.52365
pyramidal cells of rostral CA4	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.874745
CTCF_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CRCGN009_HEPG2_24H:F20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.54674
HCC2935	CCLE Cell Line Gene CNV Profiles	1.0	2.02024
blastula	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.167694
SCA7_Knock-in_GDS3545_560_mouse_Cerebellum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
hsa-miR-16-5p	MiRTarBase microRNA Targets	1.0	null
H3K27me3_MEL cell line_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cerebellar cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12039
protein complex involved in cell adhesion	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.069547
IMR32	CCLE Cell Line Gene CNV Profiles	1.0	1.55821
embryonic structure	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BRD-K32049721	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.28117
paracentral lobule, anterior part, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.16478
inner CP in ventromedial extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.52002
CTCF_K562_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SW684	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.636
umbilical cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.148223
Weight Loss	CTD Gene-Disease Associations	1.0	1.34694
MYC-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
BRD-A22502289	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49187
EZH2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K44078665	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.8004
Diabetes Mellitus	DisGeNET Gene-Disease Associations	1.0	null
GSE135400_1_v_0_kdm1b_human	RummaGEO Gene Perturbation Signatures	1.0	null
Acetolactate synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.799
SKMES1	CCLE Cell Line Gene CNV Profiles	1.0	1.45001
kinetoplast	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.548535
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08035
urinary system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056902
r7 part of paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.22413
Flocculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00219
UACC893	DepMap CRISPR Gene Dependency	1.0	11.4078
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.218
Isocitrate dehydrogenase complex (NAD+)	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.797
Crus I, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.998593
Lip	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.539
Ventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02338
BRCA1	JASPAR Predicted Transcription Factor Targets	1.0	null
thiamphenicol-glycinate	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51188
Zfx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.7785
EFM19	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3613
EP300_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r5 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29541
KM12	BioGPS Cell Line Gene Expression Profiles	1.0	0.952035
U-266	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Haustorium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.8
Recombination nodule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.623
choriocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.664775
BRD-K20420220	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30685
nucleus sagulum, superficial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03134
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5434
CRCGN017_MCF10A.TP53.M_24H:K23	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.47727
CTCF_A549_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Ventral tegmental area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.27474
bromocriptine-1507	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Nucleus of the lateral lemniscus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14557
huvec cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.417718
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4319
Prestwick-682-6638	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_mammary epithelial cell_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2IP-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CRCGN011_HEPG2_24H:B07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.2645
gingiva	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.126755
BRD-K36951400	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08851
estropipate-2506	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
697	COSMIC Cell Line Gene Mutation Profiles	1.0	null
anterior orbital gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.02235
small liver	MPO Gene-Phenotype Associations	1.0	null
morula	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.166295
skeletal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052087
CTCF_NB4_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K97081185	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.9753
Depressive Disorder	CTD Gene-Disease Associations	1.0	1.3903
CTCF_WERI-Rb-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PFEIFFER	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.830376
superficial stratum of r7BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12853
epidermal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063413
Seizures	CTD Gene-Disease Associations	1.0	1.02485
benzylpenicillin-4501	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
Hormone signaling	KEGG Pathways 2026	1.0	null
Nucleus x	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0191
substantia nigra reticulata, isthmic part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.09789
PMC4330385-supp_gkv024_nar-03005-x-2014-File010.pdf-135-TBX2_TBX2	Rummagene Transcription Factor Associations 2026	1.0	null
RAD21_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21747
r1 part of intermediate nucleus of the lateral lemniscus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.43818
Retrosplenial area, dorsal part, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07824
EVSAT	DepMap CRISPR Gene Dependency	1.0	3.04052
colorectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056164
layer IIIb of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.12286
paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.872667
levonorgestrel-2547	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Telson	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.533
response to nutrient levels	GO Biological Process Annotations 2023	1.0	null
Bed nuclei of the stria terminalis, posterior division, interfascicular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04186
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03513
sulfamonomethoxine-2742	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
sublayer 6b of CCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07976
Ventral posterior complex of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.52064
BRD-A25993094	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15233
BRD-K41719231	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50012
gemfibrozil-2113	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Entorhinal area, medial part, ventral zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.88101
icSARA deltaORF6_30Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.51904
SK-N-FI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910345
endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.356686
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62016
Motor nucleus of trigeminal	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-3.1584
K562	BioGPS Cell Line Gene Expression Profiles	1.0	1.07124
rara_21299862_mcf7_lof_human__gds4065	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.029991
icSARA deltaORF6_60Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.5836
H3K4me3_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052095
oxprenolol-5871	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.3976
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.313683
abnormal white adipose tissue amount	MPO Gene-Phenotype Associations	1.0	null
blood plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.264011
lateral terminal nucleus of the accessory optic tract, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.39814
depudecin-874	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Breast - Mammary Tissue	GTEx Tissue Gene Expression Profiles 2023	1.0	7.20795
Head capsule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.959
Type 1 diabetes mellitus_T lymphocyte_GSE10586	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.47682
Somatotropin hormone	InterPro Predicted Protein Domain Annotations	1.0	null
intestinal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.313683
BRD-K63401195	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10428
RBMY1A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.091
CTCF_Caco-2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K20043699	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37534
superficial stratum of LPrP	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27973
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.56899
RAD21-21589869-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
MDAMB175VII	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.765255
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.11
Fetal Death	CTD Gene-Disease Associations	1.0	1.36848
BRD-K54647312	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06235
lateral orbital frontal cortex (area 12/47)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.79024
ZC3H11A_ES-E14_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ifenprodil-5044	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
intermediate stratum of r1Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12101
CTCF_GM12871_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12872_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDLM2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.24941
H3K27me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
jeg-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.800626
H3K9me3_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041241
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.17646
Squamous Cell Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Midbrain raphe nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.53639
PMC8582123-13073_2021_996_MOESM3_ESM.xlsx-AIRE-HIT_AIRE	Rummagene Transcription Factor Associations 2026	1.0	null
TCF7L2_Panc1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tonzonium bromide-5678	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
COV504	CCLE Cell Line Gene CNV Profiles	1.0	2.085
chronic obstructive pulmonary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.312827
tiapride-7362	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.491978
inferolateral temporal cortex (area TEv, area 20)_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.53262
BRD-K15341710	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51721
BRD-K07462139	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00424
Learning Disorders	CTD Gene-Disease Associations	1.0	1.22339
CAL-12T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0742
Diabetes Mellitus, Type 2	HuGE Navigator Gene-Phenotype Associations	1.0	null
bufexamac-5090	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
growth/size/body phenotype	MPO Gene-Phenotype Associations	1.0	null
CRCGN017_MCF10A.TP53.M_24H:P21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.30745
OVKATE	CCLE Cell Line Gene CNV Profiles	1.0	1.71864
MOLT-16 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.512
LP-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
colonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060182
increased circulating ghrelin level	MPO Gene-Phenotype Associations	1.0	null
CTCF_epithelial cell of esophagus_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_CH12.LX_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CRCGN016_MCF10A.WT.HP_24H:A12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.06541
mantle zone of r1BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.17243
sublayer 6a of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03292
Supramammillary nucleus, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26562
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.370121
CTCF_A549_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EBF1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mediodorsal nucleus of thalamus_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.55983
BRD-K98968761	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.93991
Adductor brevis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.882
CHP126	CCLE Cell Line Gene CNV Profiles	1.0	1.54473
cellular_component	GO Cellular Component Annotations 2015	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4971-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43048
superficial stratum of r10BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37878
trophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.182027
urinary tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056685
H3K27me3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Sarcoma_SARC_TCGA-QQ-A8VH-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3127-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
BRD-K50924315	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01236
inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.90994
Corticotropic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.598
USF2	ENCODE Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5469-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Somatotropin hormone, conserved site	InterPro Predicted Protein Domain Annotations	1.0	null
portio vaginalis cervicis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.701899
Reactive cutaneous fibrous lesion	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.117
SNU-638	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910345
THP-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
pancuronium bromide-4393	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
abnormal hepatobiliary system morphology	MPO Gene-Phenotype Associations	1.0	null
aztreonam-5110	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90687
BRD-K36764776	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.39415
H3K9me3_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
Superior olivary complex, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09387
Scape	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.707
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6089
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
caco-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.235167
DMS79	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86414
pituitary	GTEx Tissue Gene Expression Profiles	1.0	2.18987
H4K20me1_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A4AX-01A-12R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-A17902629	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18976
sublayer 6a of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.51884
Isolated cleft palate	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.319
BRD-K30199352	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44158
BRD-K86721033	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18255
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.0883
tracazolate-6619	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.356686
Crus 2, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.54876
mediodorsal nucleus of thalamus_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.7186
CTCF_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF-33576154-HUMAN-LIVER-PROSTATECANCER	ChEA Transcription Factor Targets 2022	1.0	null
CTCF_MCF-7_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K80410762	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43243
cerebellar cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.56853
Laron syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.006
alprostadil-7358	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Leukemia	DisGeNET Gene-Disease Associations	1.0	null
cortico-medial group, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.959451
CTCF_K562_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
dimethadione	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37204
papaverine-6245	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZNF143_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K62692910	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.89558
MGE-Lateral region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.868348
integrin alpha4-beta1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.414164
SP1	ENCODE Transcription Factor Targets	1.0	null
Breast Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
rostral periolivary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.17264
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04496
abnormal neuroendocrine gland morphology	MPO Gene-Phenotype Associations	1.0	null
Dinoflagellate sulcus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.524
mantle zone of VPrP	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09384
BRD-K91766181	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13307
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.701526
CTCF_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_H54_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mediodorsal nucleus of thalamus_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.860111
EP300	ENCODE Transcription Factor Targets	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.733089
Plagl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	42.2942
Adipogenesis genes(Mus musculus)	WikiPathways Pathways 2014	1.0	null
VIIB, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.1431
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NANOG-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
posterior triangular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.84876
MYBL1-21750041-SPERMATOCYTES-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02832
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052018
vinpocetine-7213	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_HepG2_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YAC-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.692
CRCGN017_MCF10A.WT.HP_24H:O15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.35943
OCUM1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.33028
BRD-K62085719	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25004
incisor	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.505887
1-EBIO	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16584
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04496
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.380627
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86357
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.2664
BRD-K48325920	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.67861
Genital chamber	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.154
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4837-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Spinal nucleus of the trigeminal, oral part, rostral dorsomedial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.03198
H3K27me3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Idiopathic Growth Hormone Deficiency	DisGeNET Gene-Disease Associations	1.0	null
CTCF_GM12865_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC5417597-pone.0176679.s008.xlsx-MLL-TINT_vs_control-Unnamed_1_KMT2A	Rummagene Transcription Factor Associations 2026	1.0	null
c2c12	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.01723
sublayer 6b of PCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58654
aminocaproic acid-7258	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MAZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Endospore coat	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.364
orphenadrine-2356	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
positive regulation of peptidyl-tyrosine phosphorylation	GO Biological Process Annotations 2023	1.0	null
spleen	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.868511
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30236
gh1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.548
D425	DepMap CRISPR Gene Dependency	1.0	3.71735
EBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.2099
CHD1	ENCODE Transcription Factor Targets	1.0	null
TP63	ChEA Transcription Factor Targets	1.0	null
BRD-K57732605	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.68905
Scutellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.92
Bed nuclei of the stria terminalis, anterior division, ventral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23939
central nucleus of inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.12751
Dehydrodolichyl diphosphate synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.571
primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.59048
icSARS-Cov_Day4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.02366
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
abnormal nervous system morphology	MPO Gene-Phenotype Associations	1.0	null
CTCF_fibroblast of pulmonary artery_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
iopanoic acid-5448	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CRCGN016_MCF10A.TP53.M_24H:E17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.22819
CTCF_fibroblast of gingiva_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5962
tiletamine-6516	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MZ in rostral cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.08534
BRD-K21139023	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00374
CTCF_GM12864_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of lung_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
oxolinic acid-5094	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lupulin gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.972
GCM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.55
CTCF_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K55316222	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46545
Brain Lower Grade Glioma_LGG_TCGA-S9-A6UA-01A-12R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
rostral group of intralaminar nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.881025
Olfactory organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.753
placenta cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.275445
H3K4me1_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7538
CTCF_GM12873_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bromopride-4741	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Endopiriform nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09228
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.336336
RAD21_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1793	GDSC Cell Line Gene Expression Profiles	-1.0	-1.76054
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
CRCGN015_MCF10A.TP53.M_24H:E17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.82328
KMS28BM	CCLE Cell Line Gene Expression Profiles	1.0	1.45174
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058798
dorsolateral prefrontal cortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.35496
H3K27me3_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
CTCF_keratinocyte_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU878	CCLE Cell Line Gene Expression Profiles	1.0	2.25096
external part of AOD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.44194
H3K9me3_erythroblast_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.616586
CTCF_GM12892_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Trypomastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.531
BRD-K75983763	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01603
layer 2 of VPrP cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08833
H3K27me3_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZH-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.83174
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053105
mesalazine-6162	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Activin AB complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.732
simvastatin-3002	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K69109808	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12752
hormone receptor binding	GO Molecular Function Annotations 2023	1.0	null
PEA1	DepMap CRISPR Gene Dependency	1.0	4.36304
BRD-K53308623	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.6565
SMC3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K50272743	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38942
ureter	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.212413
bepridil-5674	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K47200630	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.55228
BRD-K90397906	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28658
Foot muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.644
CRCGN015_MCF10A.TP53.M_24H:A16	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.90542
germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.079669
CTCF_G1E-ER4_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EHEB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_epithelial cell of esophagus_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22704
MAFF_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acetylsalicylic acid-984	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HS695T	DepMap CRISPR Gene Dependency	1.0	3.47961
ivermectin-7206	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.5224
BRD-K69453385	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.85827
Labellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.099
mammillary body, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.04561
flunixin-2552	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TEAD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6328
NCVADR RES	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.1734
BRD-K82609503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34638
CTCF_foreskin fibroblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CRCGN015_MCF10A.TP53.M_24H:P13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.24054
UMC-11	GDSC Cell Line Gene Expression Profiles	1.0	1.72333
DLG4	Hub Proteins Protein-Protein Interactions	1.0	null
CTCF_fibroblast of skin of abdomen_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50153
gingival disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.292975
HUT-78 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.608
r6 part of rostral ventromedial reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09571
ivermectin-2213	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RAD21_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Huntington's Disease_CNS - Brain (MMHCC)_GSE857	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.61476
superior frontal gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.88781
pyridoxine-7171	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mature cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.221989
CRCGN015_MCF10A.TP53.M_24H:G06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.54516
Lung	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.31354
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.0903
Decidual cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.924
CTCF_GM13976_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06866
LIVF001-021	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.28635
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040973
Urinary bladder squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.686
Pituitary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.55362
other source	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.415814
CTCF_HCT116_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nucleus of the inferior collicular brachium, caudal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19355
BRD-K87815532	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04419
anterior group of nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.49028
ajmaline-2899	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cochlear nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.22467
PTEN_01_303	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.59788
RAD21_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K71213946	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38921
NCI-H2171	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MEWO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
D283MED	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45277
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.640428
BRD-K56536241	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3263
CTCF_fibroblast of the aortic adventitia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
superficial stratum of p1B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.28878
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4994-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K83276573	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54388
MGA::EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4296
hsa-miR-541	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Bed nuclei of the stria terminalis	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.25113
fendiline-3190	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064905
ZNF217	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66657
zona incerta, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.997717
intermediate stratum of THyB-P	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0806
ZBTB7A	ENCODE Transcription Factor Targets	1.0	null
lmx1b_18351676_hind_limb_bud_lof_mouse_gpl1261_gds3320	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.166765
HSC-2	GDSC Cell Line Gene Expression Profiles	-1.0	-1.95146
CORL24	CCLE Cell Line Gene Expression Profiles	-1.0	-2.32213
Daudi	GDSC Cell Line Gene Expression Profiles	1.0	1.65076
r7 part of rostral ventromedial reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03849
HCC95	CCLE Cell Line Gene Expression Profiles	1.0	1.59957
NFIA_Deficiency_GDS2775_640_mouse_Postnatal brains (at P16)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
microcellular tegmental nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37275
RAD21_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posteroventral (inferior) parietal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.62267
Ventral posterolateral nucleus of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23404
CTCF_skin fibroblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12436
receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.049575
MM253	DepMap CRISPR Gene Dependency	1.0	6.36768
Kidney renal papillary cell carcinoma_KIRP_TCGA-IA-A83W-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
INSM1_KO_GDS5066_472_mouse_pituitary gland	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
BRD-K23333192	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27675
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
gingival overgrowth	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.550134
proxyphylline-5993	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
post-anaphase microtubule array	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.778
CRCGN015_HEPG2_48H:C24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.38705
H3K9me3_G1E_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE161864,GSE161866_4_v_3_ror2_human	RummaGEO Gene Perturbation Signatures	1.0	null
RAD21_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mediodorsal nucleus of thalamus_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.976682
COLO679	DepMap CRISPR Gene Dependency	1.0	3.54736
Orbital area, lateral part, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.30752
cefalexin-4654	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
levonorgestrel-4730	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
abnormal pituitary gland weight	MPO Gene-Phenotype Associations	1.0	null
PRDM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.0587
VZ in caudal subicular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.998381
BRD-K05409106	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02631
Antennal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.943
Accessory olfactory bulb, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.08833
DANG	DepMap CRISPR Gene Dependency	1.0	2.67026
CTCF_CH12.LX_mm9_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
increased brown adipose tissue amount	MPO Gene-Phenotype Associations	1.0	null
RAD21_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_astrocyte of the spinal cord_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K59185421	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.57399
PR interval	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.822185
alveolus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.21883
JHUEM1	DepMap CRISPR Gene Dependency	1.0	2.08926
MZ2-MEL	GDSC Cell Line Gene Expression Profiles	-1.0	-1.57322
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.03
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
BRD-K70052888	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01688
dorsolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.922593
Pituitary Cachexia	DisGeNET Gene-Disease Associations	1.0	null
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5598
precuneus, right, superior lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.870755
dorsolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.34023
TE-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_MCF-7_hg19_9	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ventral posteromedial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.6528
ketanserin-3209	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZBTB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9605
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.644858
Sensillum trichodeum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.891
epimastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.900296
Nervous System Diseases	CTD Gene-Disease Associations	1.0	1.12082
PMC12019518-ao5c02459_si_002.xlsx-Table_S3-Table_S3_Screening_of_genes_that_are_commonly_upregulated_in_cells_on_stiff_substrate_and_down-regulated_by_KD_of_UBE2A_B_AR	Rummagene Transcription Factor Associations 2026	1.0	null
CTCF_A549_hg19_9	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Diabetic Nephropathy_Renal Tissue_GSE1009	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	0.526547
SUM44PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.957369
brain stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.324239
Choriocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.741
isthmic portion of paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03489
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
striatum_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.995051
BRD-K58534227	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40908
CRCGN012_HEPG2_24H:D07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.43262
internal female genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
POLR2A_testis_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K54476947	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03025
NEC8	GDSC Cell Line Gene Expression Profiles	1.0	3.60177
Sarcoma_SARC_TCGA-DX-A6YT-01A-21R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NB-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.768
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046312
ZBTB7A_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
clozapine_mus musculus_gpl339_gse6467	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_HCT116_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAZ_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cotinine-4650	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Nucleus of the lateral lemniscus, horizontal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26623
sulfadimethoxine-7400	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
gata1_15860665_megakaryocytes_lof_mouse_gpl1261_gds1245	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.204557
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892184
PL-21	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18733
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
midbrain reticular formation, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.45847
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07625
primary visual cortex (striate cortex, area V1/17)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10421
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
pyrazinamide-4962	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
496100467_FWM_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	14.6698
carbamazepine-919	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cerebellar cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.04838
retrotrapezoid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14626
KMS20	DepMap CRISPR Gene Dependency	1.0	2.49603
CTCF_GM12875_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.169091
Acute Myeloid Leukemia_LAML_TCGA-AB-2824-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_H1-hESC_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055415
BRD-K33956247	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.39356
H3K4me3_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
cerebellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.324605
RAD21_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
epidermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06085
outer CP in midcingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.13059
SRY	ChEA Transcription Factor Targets	1.0	null
CRCGN017_MCF10A.WT.HP_24H:H24	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	4.53175
Ventral posterolateral nucleus of the thalamus, parvicellular part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.69978
RAD21_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A2EL-01A-12R-A18C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12864_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nih 3T3	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.60592
primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12561
Edema	HuGE Navigator Gene-Phenotype Associations	1.0	null
GP5D	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.8006
trimethylcolchicinic acid-4787	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
medial vestibular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.8973
SP in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.05541
TP63	JASPAR Predicted Transcription Factor Targets	1.0	null
TBL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43888
indusium griseum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.47366
calcium folinate-7401	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_GM12870_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.41554
amygdaloid complex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.86759
H3K4me3_H7_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
MM1S	DepMap CRISPR Gene Dependency	1.0	2.29418
CRCGN015_MCF10A_48H:B10	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	7.06815
PMC5543043-data_sheet_2.xlsx-LPS_MDM_module-Upstream_Regulator_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
CTCF_fibroblast of mammary gland_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
superficial stratum of r6BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14603
SG in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.05843
KNS42	CCLE Cell Line Gene Expression Profiles	-1.0	-1.64638
Memory Disorders	CTD Gene-Disease Associations	1.0	1.14781
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040026
BRD-K23424219	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23262
globose nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.73463
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.67181
CTCF_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal adipose tissue amount	MPO Gene-Phenotype Associations	1.0	null
PMC6358228__F1	PFOCR Pathway Figure Associations 2023	1.0	null
BT-483	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MDAMB453	CCLE Cell Line Gene CNV Profiles	1.0	1.91896
fenoprofen-4736	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
lateral hypothalamic area, anterior region, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.15645
GCM2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8034
r4 part of ventral parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03962
SP1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Anteromedial visual area, layer 5	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.71211
Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-5330-01A-01R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.335
TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9825
BRD-K12951693	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50448
melanocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068255
CTCF_foreskin fibroblast_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.049352
retromammillary area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.73419
Necrosis Of Pituitary Gland (Postpartum)	DisGeNET Gene-Phenotype Associations	1.0	null
Postpiriform transition area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.05744
Pain	CTD Gene-Disease Associations	1.0	1.31837
BRD-K83586473	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27071
CTCF_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2810	COSMIC Cell Line Gene Mutation Profiles	1.0	null
gingival fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.220152
BRD-K30013099	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.45598
Muscular Dystrophy_Muscle - Striated (Skeletal) (MMHCC)_GSE2507	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-2.51676
COLO800	DepMap CRISPR Gene Dependency	1.0	5.77702
CADM1_KO_GDS2026_301_mouse_testis	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
GRANTA519	CCLE Cell Line Gene CNV Profiles	-1.0	-2.28931
CRCGN015_MCF10A.TP53.M_24H:M07	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	5.25713
CRCGN016_MCF10A.WT.HP_24H:C21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.74432
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03647
Childhood Leukemia	DisGeNET Gene-Disease Associations	1.0	null
EKVX	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.888407
Septum pellucidum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.604
Nephroblastoma_Renal Tissue_GSE2712	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.53492
Cardiovascular Diseases	HuGE Navigator Gene-Phenotype Associations	1.0	null
Inferior salivatory nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.42543
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YD-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K82145108	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02704
CTCF_cerebellum_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
orofacial cleft	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.182375
supramarginal gyrus, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.906475
striatum_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.848993
HOXA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21519
CTCF_K562_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SCC-25	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.849898
BRD-K12750296	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05043
BSC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.95
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51R-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BICR22	CCLE Cell Line Gene Expression Profiles	1.0	2.11496
Edema	CTD Gene-Disease Associations	1.0	1.53061
BRD-K49434474	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14451
hsa-miR-590-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
NFYA	JASPAR Predicted Transcription Factor Targets	1.0	null
Inferior olivary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.40369
bronchoalveolar system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.072916
BRD-K89230185	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17287
periventricular stratum of AOB	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.13478
abnormal sex determination	MPO Gene-Phenotype Associations	1.0	null
BRD-K22145792	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.05463
mixed cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.413153
Piriform area, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24929
absent lactotrophs	MPO Gene-Phenotype Associations	1.0	null
Epstein-Barr Virus_Akata BL clone-4hr starve_None_GSE19761	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.55305
CTCF_brain microvascular endothelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HeLa-S3_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nervous system phenotype	MPO Gene-Phenotype Associations	1.0	null
CTCF_GM19240_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K58498516	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31691
CTCF_choroid plexus epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Nucleus of the brachium of the inferior colliculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.27796
pituitary	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.04881
trazodone-2379	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TCF12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.3526
lateral hypothalamic area, tuberal region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.45355
Supramammillary nucleus, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.5375
plasma membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04394
trigeminal	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.47151
KU812	DepMap CRISPR Gene Dependency	1.0	3.52758
growth hormone receptor binding	GO Molecular Function Annotations 2025	1.0	null
PMC7986631__F1	PFOCR Pathway Figure Associations 2023	1.0	null
GSE264621_1_v_6_secretin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Hip circumference adjusted for BMI	GWAS Catalog SNP-Phenotype Associations 2025	1.0	1.83979
BRD-K87807408	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.78358
BRD-K71204648	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22613
H3K4me1_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-NF-A4WU-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Uterine wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.671
LY-294002-4440	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-8564-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_cortical plate_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1534	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36769
U-937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21061
latamoxef-3028	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.00963
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
primary motor cortex (area M1, area 4)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.03299
metencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.320956
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052634
CTCF_G1E-ER4_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SMSCTR	DepMap CRISPR Gene Dependency	1.0	2.90974
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	1.0	2.28162
skin cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.692902
H3K27me3_MEL cell line_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07889
Acne_Sebocyte_GSE10432	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.57154
posteroventral (inferior) parietal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02913
santonin-3795	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Integral component of Golgi membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.717
CTCF_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAZ	ENCODE Transcription Factor Targets	1.0	null
medial subdivision of central nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.9393
CHP-126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-UY-A78L-01A-12R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CA2 field, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.96746
adipose tissue phenotype	MPO Gene-Phenotype Associations	1.0	null
Atherosclerosis	CTD Gene-Disease Associations	1.0	1.09576
ICC15	DepMap CRISPR Gene Dependency	1.0	2.36584
hippocampus (hippocampal formation)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10803
H3K27me3_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nifedipine-7303	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
pipenzolate	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.06975
abnormal forebrain morphology	MPO Gene-Phenotype Associations	1.0	null
CTCF_A549_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Annulus fibrosus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.585
Ocellus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.64
Four-helical cytokine, core	InterPro Predicted Protein Domain Annotations	1.0	null
Entorhinal area, medial part, ventral zone, layer 3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.49728
BRD-K56250581	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13271
ethanol_mus musculus_gds3703	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TC32	CCLE Cell Line Gene Expression Profiles	1.0	1.35062
SMC3_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JHOM2B	CCLE Cell Line Gene CNV Profiles	-1.0	-2.41551
nucleus of the stria terminalis, medial division, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12184
T3M4	CCLE Cell Line Gene Expression Profiles	1.0	1.86151
H3K27me3_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K16686330	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18576
Hypertension	CTD Gene-Disease Associations	1.0	1.32876
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.92355
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8EH-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CRCGN015_MCF10A.TP53.M_24H:O12	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.71203
endoplasmic reticulum	LOCATE Predicted Protein Localization Annotations	1.0	null
colorectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06679
Isolated Growh Hormone Deficiency	DisGeNET Gene-Disease Associations	1.0	null
subiculum, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.03065
Heart Diseases	CTD Gene-Disease Associations	1.0	1.24687
frontal pole, left, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.983492
BRD-K87995704	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13117
BRD-K83312314	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13168
CTCF_fibroblast of villous mesenchyme_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
morphine_mus musculus_gpl6105_gds3703	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JEG-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.494
SR-95531-4820	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A93436351	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0959
dorsolateral prefrontal cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.42091
outer portion of medial ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.920389
CEBPB	ENCODE Transcription Factor Targets	1.0	null
Xcp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.52
CTCF_retinal pigment epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
outer SZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.870095
angular gyrus, right, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.844917
NCI-H2023	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_GM12869_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cingulum bundle, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.95058
Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A6H8-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
blastomere	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.163473
abnormal fertility/fecundity	MPO Gene-Phenotype Associations	1.0	null
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.217
SG in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.74454
Choriocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.42
Fundus of striatum	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03886
RAD21_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3365-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC8684775-CTM2-11-e640-s002.xlsx-Sheet1-Table_S3_MAF_file_of_the_CCS_samples_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
outer SZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.834054
M059K	CCLE Cell Line Gene Expression Profiles	-1.0	-1.58751
BRD-K45058329	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23055
gliclazide-5089	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MCF10F	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.66595
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5694-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
r2 part of anteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00589
SUIT-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
abnormal brown adipose tissue morphology	MPO Gene-Phenotype Associations	1.0	null
delayed vaginal opening	MPO Gene-Phenotype Associations	1.0	null
CTCF_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
triamterene-6010	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
protozoan form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.261624
Calcaneal bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.598
ventromedial hypothalamic nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.20255
Nuclear exosome focus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.763
CTCF_fibroblast of lung_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
rostral subdivision of medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.943578
aklomide	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25248
reproductive system phenotype	MPO Gene-Phenotype Associations	1.0	null
placenta	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
nifenazone-2122	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PMC11611169-pone.0314092.s001.docx-3-PPARG_PPARG	Rummagene Transcription Factor Associations 2026	1.0	null
H3K9me3_G1E_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
dentate gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.952772
reduced fertility	MPO Gene-Phenotype Associations	1.0	null
abnormal secondary sex determination	MPO Gene-Phenotype Associations	1.0	null
trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.463905
POLR2AphosphoS5_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K94993773	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1746
Gestational diabetes	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121
testis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.07371
UM-UC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.849898
A-VN-1203-2004(H5N1)_Day4-10^2pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.9157
TOX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64595
homeostasis/metabolism phenotype	MPO Gene-Phenotype Associations	1.0	null
CTCF_MCF-7_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K80679698	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13394
ZM-226600	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20335
cell culture	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.416576
Parasubiculum, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3277
Ebolavirus(ZEBOV)_6day_PBMCs_rNAPc2treated_21987740_GSE24943	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	0.068419
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051312
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22704
Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A6I3-11A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SCaBER cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.72
placenta	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.807716
PI3K-Akt signaling pathway	KEGG Pathways 2026	1.0	null
Crus II, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.03978
HUPT3	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
layer 6 of PaS	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03363
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC7306500__F2	PFOCR Pathway Figure Associations 2023	1.0	null
RAD21_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12872_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Carcinogenesis	DisGeNET Gene-Phenotype Associations	1.0	null
clomipramine-4487	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SPI1	ChEA Transcription Factor Targets	1.0	null
Ventral pallidus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.94183
SBC-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCIH2171	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62934
BRD-K00347903	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04477
SIRT1_KO_GDS4895_410_mouse_brain	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
pulmonary artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.250627
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.71501
Nucleus y	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03363
mammillary part of PHyB	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.73376
mesoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.098327
inner SZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.99477
superficial stratum of r1BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	3.08112
atropine-5865	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Hot Flashes	CTD Gene-Disease Associations	1.0	1.13518
Sarcoma_SARC_TCGA-X6-A8C3-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SARM_KO_GDS4842_411_mouse_brain	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-HV-A5A5-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pituitary Short Stature	DisGeNET Gene-Disease Associations	1.0	null
syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.1755
CTCF_GM12866_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.95227
SIX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8538
hippocampus (hippocampal formation)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.40433
BRD-K49333293	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35598
Epulis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.365
BRD-K69692345	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51265
aztreonam-2118	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
3-hydroxy-DL-kynurenine-4681	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
abnormal circulating ghrelin level	MPO Gene-Phenotype Associations	1.0	null
fetus	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hindbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.302478
CTCF_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cerebellar vermis	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.911527
H3K27me3_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Pituitary Neoplasms	CTD Gene-Disease Associations	1.0	1.13793
Adenocarcinoma	CTD Gene-Disease Associations	1.0	1.57186
betonicine-6063	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A7M6-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.04427
ion binding	GO Molecular Function Annotations 2015	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8430-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_HEK293_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
omeprazole-6606	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
increased white adipose tissue amount	MPO Gene-Phenotype Associations	1.0	null
CRCGN017_MCF10A.TP53.M_24H:I01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.05355
dorsal endopiriform nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.43188
SCABER	CCLE Cell Line Gene Expression Profiles	1.0	1.42391
CTCF_GM12871_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ACHN	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.46479
inner CP in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.920578
Bed nuclei of the stria terminalis, anterior division	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33871
icSARS CoV_7Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.08506
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.217346
BRD-K53771043	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11146
Fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.388
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4319
outer CP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.26778
STAT1_01_154	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.5938
jaw	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.333763
CA1 field, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.2206
abnormal blood homeostasis	MPO Gene-Phenotype Associations	1.0	null
THRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.1978
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.18424
REH	GDSC Cell Line Gene Expression Profiles	1.0	1.44937
artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057402
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9165
trypanosomoid form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.473869
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
BRD-K31490008	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.7362
vincamine-3784	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
acacetin-3942	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SNU668	CCLE Cell Line Gene Expression Profiles	1.0	1.49223
EZH2	ENCODE Transcription Factor Targets	1.0	null
Chorionic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.42
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.523982
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051249
CTCF_HepG2_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
spectinomycin-4773	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HEC-1-A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.832839
bone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054836
ZNF189	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6665
MDN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44617
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.57082
SHSYSY+RA	BioGPS Cell Line Gene Expression Profiles	-1.0	-2.24199
Endochondral Ossification(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
BRD-K49903196	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03037
vascular endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.089136
BRD-K04771555	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16153
small intestine epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.193227
NR4A2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.829
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.907865
CTCF_MEL cell line_mm9_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal homeostasis	MPO Gene-Phenotype Associations	1.0	null
superior occipital gyrus, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.2714
olfactory tubercle, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.1867
MAZ_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055311
c92	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.925
BRD-K14702616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0666
CAL-39	GDSC Cell Line Gene Expression Profiles	1.0	1.57827
growth factor activity	GO Molecular Function Annotations 2023	1.0	null
placental cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.261284
MRPS27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06858
BRD-K44923117	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.69571
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6124
germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.107822
CTCF_GM12870_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6741
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
H3K4me1_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.324
Flexor tendon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.743
BRD-K44752364	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12894
H3K9me3_erythroblast_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
TGBC24TKB	GDSC Cell Line Gene Expression Profiles	1.0	1.75666
JAR cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.047
Chorion frondosum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.731
iopromide-2739	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Neuroactive ligand-receptor interaction	KEGG Pathways 2026	1.0	null
mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.08304
KYSE-510	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01364
AdrenalCortex	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.02073
CUX1	ChEA Transcription Factor Targets	1.0	null
EVSA-T	GDSC Cell Line Gene Expression Profiles	1.0	1.72444
AOB, internal plexiform layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23493
norfloxacin-7283	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
telmisartan_rattus norvegicus_gpl4135_gse29445	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
thb5	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.914
diclazuril	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49205
Embryonic structure	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
medial mammillary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.24387
CTCF_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054614
Hoarseness	DisGeNET Gene-Phenotype Associations	1.0	null
BRD-K21990111	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13714
CTCF_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-A55574211	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.89063
CRCGN015_HEPG2_48H:H01	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.78428
SNCA_KO_GDS4153_442_mouse_Cerebellum - 6 month	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
BRD-K45964657	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06568
Colleterial gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.238
Ciliary pocket collar	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.601
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61968
HELA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.869359
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.88093
BRD-K53725468	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19305
CTCF_kidney_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF524	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.08161
BRD-K09250647	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01109
medial superior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38488
inner CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.10768
Skin tag	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.117
HNF1B_01_103	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.99045
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.762
Hyperplasia	CTD Gene-Disease Associations	1.0	1.49432
abnormal sexual maturation	MPO Gene-Phenotype Associations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1M6-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CIA complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.947
RAD21_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_astrocyte of the cerebellum_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Nucleus of the lateral lemniscus, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16378
H3K27me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r2 part of ventral lateral lemniscal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11744
GSE154350_1_v_0_ascl2_human	RummaGEO Gene Perturbation Signatures	1.0	null
berberine-2770	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
methocarbamol-2274	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K19593188	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03561
zygote	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.157787
mantle zone of r5Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02338
APP_KO_GDS4414_370_mouse_prefrontal cortex	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
decreased pituitary gland weight	MPO Gene-Phenotype Associations	1.0	null
abducens nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.21148
Male pronucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.61
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7732-01A-11R-2139-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
uterine cervix	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.090869
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9363
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040635
neomycin-7221	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSK3B_knockdown_158_GSE35351	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.45643
INSM1_Deficiency_GDS5066_272_mouse_Fetal pituitary glands from embryonic day 17.5	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
HIC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3877
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.457214
BRD-K01762107	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32324
Necrosis	CTD Gene-Disease Associations	1.0	1.39924
superficial stratum of r9BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.09712
CTCF_fibroblast of upper leg skin_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZFP14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.0677
Reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
OCUB-M	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SF539	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.37548
rostral interpeduncular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.98973
superficial stratum of r2BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.62083
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.5395
P31-FUJ	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NELFE	ENCODE Transcription Factor Targets	1.0	null
positive regulation of growth	GO Biological Process Annotations 2023	1.0	null
pre-eclampsia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.442
CORL88	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74266
posteroventral (inferior) parietal cortex_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.06664
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.01069
Dermatitis	DisGeNET Gene-Disease Associations	1.0	null
Persistent fetal circulation syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.111
CTCF_GM12874_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H196	COSMIC Cell Line Gene Mutation Profiles	1.0	null
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.953907
Isolated growth hormone deficiency type II	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.615
NCI H226	BioGPS Cell Line Gene Expression Profiles	1.0	0.936277
umbilical vein endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.417337
rectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064292
external encapsulating structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.165
Acute Lung Injury_Whole blood_GSE10474	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.60773
Wholebrain	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.863482
dexamethasone_homo sapiens_gpl4133_gse42619	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
VM-CUB-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
netilmicin-3524	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.094783
BRD-K59386816	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.45139
diclofenac-7215	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Decidua basalis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.659
PPARG	JASPAR Predicted Transcription Factor Targets	1.0	null
pulmonary emphysema	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.474877
decreased somatotroph cell number	MPO Gene-Phenotype Associations	1.0	null
BRD-K69350885	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18991
KMRC2	CCLE Cell Line Gene Expression Profiles	1.0	1.4617
CTCF_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Panhypopituitarism	DisGeNET Gene-Disease Associations	1.0	null
CTCF_T47D_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K44834268	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06481
EWS-FLI1-20517297-SK-N-MC-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
abnormal liver morphology	MPO Gene-Phenotype Associations	1.0	null
BRD-K37592272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30047
superficial mantle of isBM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15975
abnormal brown adipose tissue amount	MPO Gene-Phenotype Associations	1.0	null
culture medium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.340757
CJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43858
NCIH1876	CCLE Cell Line Gene Expression Profiles	-1.0	-1.5061
ZBTB7B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6339
Fetallung	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.16161
ZNF75A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.993
VZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.27055
Agranular insular area, ventral part, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.25744
CTCF_GM12865_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF-33576154-HUMAN-PERIGASTRICLN-PROSTATECANCER	ChEA Transcription Factor Targets 2022	1.0	null
AU565	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BSC-40 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.979
CRCGN008_HEPG2_24H:F15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.27005
BRD-K08094365	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27212
abnormal body size	MPO Gene-Phenotype Associations	1.0	null
PMC8423434-mmc7.xlsx-KLF4_HENSM-Genes_n_2172_KLF4	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-A01403444	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11214
CTCF_endothelial cell of umbilical vein_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Subceruleus nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.22064
isometheptene-5082	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_C2C12_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
layer III of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.03697
CTCF_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Carapace	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.644
H4K20me1_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.041135
MZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9214
MutSgamma complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.159
VCP-NSFL1C complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.938
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.166995
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054027
cation binding	GO Molecular Function Annotations 2015	1.0	null
ZBTB24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.5725
Kaposi Sarcoma	DisGeNET Gene-Disease Associations	1.0	null
CTCF_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052441
Bed nuclei of the stria terminalis, anterior division, anterolateral area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1573
laterodorsal subdivision of area 8	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.05936
umbilical vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.191147
BRD-K44133102	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23154
CRCGN015_HEPG2_48H:L02	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	3.46114
CTCF_GM12864_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tracazolate-4964	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Postpiriform transition area, layers 3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.85407
Leaf epidermal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.576
MAFK_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
layer 3 of InsCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07976
PRC2_EDD_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
BACH1	ENCODE Transcription Factor Targets	1.0	null
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4319
BRD-K10749532	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31136
Spotted fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.169
MTREC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.057
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.065219
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
obstructive lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.125447
SG in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	3.26785
pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.82254
extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
BRD-K28912195	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06597
H3K27me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
gramine-4118	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K49472569	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.11599
H3K9me3_CH12.LX_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
CTCF_limb_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.03816
MV4-11 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.806
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.644858
Supramammillary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.39383
hyoscyamine-5099	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MYBL1	ChEA Transcription Factor Targets	1.0	null
CTCF_retinal pigment epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Down_bins-Down_bins_loosing_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
Growth hormone synthesis, secretion and action	KEGG Pathways 2026	1.0	null
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040527
PANC-10-05	GDSC Cell Line Gene Expression Profiles	-1.0	-1.63284
lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.068624
eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057231
Edinger-Westphal nucleus (accessory oculomotor nucleus)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.27283
HCC1937	CCLE Cell Line Gene Expression Profiles	-1.0	-2.22985
liver/biliary system phenotype	MPO Gene-Phenotype Associations	1.0	null
SNCA_KO_GDS4153_528_mouse_cerebellum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Normoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.956
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.222224
H3K4me1_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
molaris	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.487496
Isolated growth hormone deficiency type IA	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.013
Von Willebrand Disease	DisGeNET Gene-Disease Associations	1.0	null
Ovariole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.686
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.63979
Bed nuclei of the stria terminalis, posterior division, transverse nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11941
WRNIP1	ENCODE Transcription Factor Targets	1.0	null
Exosporium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.85
H3K27me3_megakaryocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.94248
striatum_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.07288
T47D	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.578057
cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.935016
BRD-K47814830	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.72985
posteroventral (inferior) parietal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.54047
THAP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.8254
CRCGN011_HEPG2_24H:M13	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.87553
anterior hypothalamic area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.67361
OBF-1_NULL MUTATION_GDS3473_571_mouse_Bone marrow pre-BII cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
plantlet	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.861363
superior rostral gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.10313
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1MF-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SP in entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.26617
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826719
CTCF_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF143_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM13977_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-MG-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K09206831	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.93369
BRD-K93956318	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.33656
BRD-K10182289	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37117
outer SZ in ventrolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.18636
hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044392
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05637
Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A6I3-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K40410846	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.01736
craniofacial region	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.113892
CTCF_GM12867_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.320591
CTCF_GM10266_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OVCAR-8	GDSC Cell Line Gene Expression Profiles	-1.0	-1.60897
SNU869	CCLE Cell Line Gene Expression Profiles	1.0	2.40871
caudal portion of VFC (area 44)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.41379
gata4_18812176_jejunum_tissue_lof_mouse_gpl1261_gds3486	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.784368
Insect labium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.66
r10 part of the inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3932
CTCF_WERI-Rb-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CRCGN017_MCF10A.TP53.M_24H:K20	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.52689
occipital pole, left, inferior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.18738
BRD-K83667863	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37497
SMC3_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC7306500__F2	PFOCR Pathway Figure Associations 2024	1.0	null
antimycin A-5053	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_MEL cell line_mm9_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21	ENCODE Transcription Factor Targets	1.0	null
A-VN-1203-2004(H5N1)_Day4-10^3pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.61817
BRD-K44712456	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.46266
PMC4387713-supp_gad.255984.114_Table_S5.xlsx-S5F-Up_H3K27me3_DPY30_KD-Unnamed_12_AR	Rummagene Transcription Factor Associations 2026	1.0	null
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.849898
BRD-A25184723	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.76677
CRCGN016_MCF10A.TP53.M_24H:P21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.11855
superficial stratum of CoPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.39814
germ layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076
BRD-K50677542	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08445
transmembrane receptor protein tyrosine kinase signaling pathway	GO Biological Process Annotations 2023	1.0	null
IA-LM	GDSC Cell Line Gene Expression Profiles	-1.0	-1.66817
CTCF_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K89760040	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17468
BRD-K58787433	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16747
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6741
primary motor cortex (area M1, area 4)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.920882
ALEXANDERCELLS	CCLE Cell Line Gene Expression Profiles	1.0	1.77553
HELA	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.939486
r3 part of trigeminal transition zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.57719
MKN1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58907
HMEL	CCLE Cell Line Gene Expression Profiles	1.0	1.53278
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.531089
sirolimus-987	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CRCGN017_MCF10A.WT.HP_24H:A03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	-1.0	-2.06554
KD	DepMap CRISPR Gene Dependency	1.0	6.35145
PMC7933708-mmc2.xlsx-DNMT-target_DNMT1	Rummagene Transcription Factor Associations 2026	1.0	null
r5 part of the cochlear column	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02293
RKO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61968
SNU-475	COSMIC Cell Line Gene Mutation Profiles	1.0	null
mitochondrial part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.057007
HT144SKINFV1	DepMap CRISPR Gene Dependency	1.0	2.68262
KLE	CCLE Cell Line Gene Expression Profiles	1.0	2.65491
midbrain reticular formation, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.93121
MCAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54429
CTCF_MCF-7_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posterior hypothalamic area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.969185
Taurine dioxygenase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.694
acute myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078148
cytokine receptor binding	GO Molecular Function Annotations 2023	1.0	null
paroxetine-4556	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCIH1436	CCLE Cell Line Gene Expression Profiles	-1.0	-3.21623
BRD-K11404512	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3336
dorsolateral prefrontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.72619
inferolateral temporal cortex (area TEv, area 20)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.857804
POU2F2_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
furaltadone-3932	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
perhexiline-5081	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Gestational choriocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
NOS1	DepMap CRISPR Gene Dependency	1.0	5.52392
PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Amp_AA-TCGA-Unnamed_20_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
Sarcoma_SARC_TCGA-X6-A7W8-01A-21R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12436
Artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.117
lateral hypothalamic area, mammillary region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.846406
BRD-K18313650	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24943
CRCGN016_MCF10A.TP53.M_24H:B17	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.1349
layer 1 of PaS	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.07195
GP2D	CCLE Cell Line Gene Expression Profiles	-1.0	-1.82469
superficial stratum of m1AL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.37234
PrPC_KO_GDS4352_359_mouse_Developing hippocampus from adults (3-mo-old)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JT-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDAMB453	DepMap CRISPR Gene Dependency	1.0	6.91021
TOP2B_drug inhibition_GSE1417_341_human_HeLa	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Weight Gain	CTD Gene-Disease Associations	1.0	2.88009
PMC6358228__F1	PFOCR Pathway Figure Associations 2024	1.0	null
rectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06166
HCC70	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36715
placenta	HPA Tissue Protein Expression Profiles	1.0	2.04572
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
H3K36me3_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
chronic fatigue syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.82595
MCF-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71439
BRD-K72821236	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42425
Adenohypophysis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.179
RAD21	ChEA Transcription Factor Targets	1.0	null
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.31119
abnormal hormone level	MPO Gene-Phenotype Associations	1.0	null
Piriform area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.41983
Atherosclerosis_Hepatic Tissue_GSE363	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	2.02227
H3K4me2_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Acute Chest Syndrome	DisGeNET Gene-Disease Associations	1.0	null
HCC1171	CCLE Cell Line Gene Expression Profiles	-1.0	-1.75118
Primary somatosensory area, lower limb, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02126
SK-MES-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Pituitary gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.695
Isolated growth hormone deficiency type III	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
epulis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.00668
VCY1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40782
nefopam-4752	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FHL2_Deficiency_GDS3344_596_mouse_Spontaneously immortalized embryonic fibroblasts (EFs)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Microvillus membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.562
lateral pallium	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1995
superficial stratum of isBI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.09712
praziquantel-7228	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MAZ_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JAR	GDSC Cell Line Gene Expression Profiles	1.0	1.97196
Cytokine-cytokine receptor interaction	KEGG Pathways 2026	1.0	null
BCP1	CCLE Cell Line Gene CNV Profiles	1.0	1.42455
biofilm	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.219485
Megasporangium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.82
Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.3065
H3K4me3_CH12.LX_mm9_5	ENCODE Histone Modification Site Profiles	1.0	null
Pituitary gland tumor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.248
EBF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5022
liminal periaqueductal gray of m2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.34243
r1 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12184
posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.929866
quercetin-4264	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.18976
butyl hydroxybenzoate-4647	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JS-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
D-247MG	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K19269952	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09347
Kinetoplast	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.895
superficial stratum of r1BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.4375
MAZ_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF143_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pdx1_22135308_duodenum_lof_mouse_gpl1261_gds4348	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.662447
H3K27me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
phthalylsulfathiazole-5249	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HT29	BioGPS Cell Line Gene Expression Profiles	1.0	1.52863
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YW-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.799923
RAD21_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCT 116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07889
Urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
zomepirac-4479	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K61004012	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19012
superficial stratum of p2B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16176
outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.388523
EGFR_druginhibition_83_GSE27640	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.53843
NCIH2110	CCLE Cell Line Gene Expression Profiles	1.0	1.5432
mantle zone of LPrP	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.14882
SKCO1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.0543
EWS-FLI1-20517297-SK-N-MC-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
nucleus of the inferior collicular brachium, rostral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.20788
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50153
GSK3B_knockdown_204_GDS4305	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.92945
CTCF_A549_hg19_10	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r9 part of paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0581
CTCF_bone marrow macrophage_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PATU8988S	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74068
dorsal lateral geniculate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.59648
H3K9me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
intestinal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058607
receptor ligand activity	GO Molecular Function Annotations 2023	1.0	null
Epimastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.083
CHP-212	GDSC Cell Line Gene Expression Profiles	-1.0	-1.63992
colonic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060371
integrin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.070733
Sarcoma_SARC_TCGA-DX-A6YR-01A-33R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Placenta	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.839
APOD_OE_GDS3913_489_mouse_Cerebellum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
CTCF_WI38_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CRCGN011_HEPG2_24H:D21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.19181
SCC9	CCLE Cell Line Gene CNV Profiles	1.0	1.55356
PMC10082046-41467_2023_37049_MOESM7_ESM.xlsx-Sheet1-Supplementary_Data_4_Genes_upregulated_in_ASPS-KY_cells_by_ASPSCR1-TFE3_knockdown_TFE3	Rummagene Transcription Factor Associations 2026	1.0	null
A498	COSMIC Cell Line Gene Mutation Profiles	1.0	null
lateral mammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.855767
Inflammation	CTD Gene-Disease Associations	1.0	1.22599
BRD-K35964249	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29905
BRD-K50432649	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25603
Li-Fraumeni-Like Syndrome	DisGeNET Gene-Disease Associations	1.0	null
OUMS-23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.5224
cell surface receptor protein tyrosine kinase signaling pathway	GO Biological Process Annotations 2025	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KW-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K03546460	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22503
bladder	GTEx Tissue Gene Expression Profiles	1.0	1.10081
CTCF_fibroblast of villous mesenchyme_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BA/F3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.908
mantle zone of Mam	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.00568
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.63846
m2 part of paranigral nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.58194
superficial stratum of r3Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.07656
SNU-182	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hippocampus (hippocampal formation)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.53588
ZNF644	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46021
POU2F2	ENCODE Transcription Factor Targets	1.0	null
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
inferior olive, principal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.01479
t-lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.120237
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.683335
CTCF	MotifMap Predicted Transcription Factor Targets	1.0	null
NCI-H446	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.659891
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.175
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.95519
BRD-K22449045	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49538
subbrachial nucleus, caudal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16512
PAX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8276
clemizole-7371	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
sclera	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.2559
positive regulation of receptor signaling pathway via JAK-STAT	GO Biological Process Annotations 2025	1.0	null
yy1_22711985_skeletal_muscle_lof_mouse_gpl8321_gse39009	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.573224
Male inflorescence	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.694
melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.696172
GSE264621_1_v_3_secretin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Hypothalamic medial zone	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00744
H3K27me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34539
PMC5527282-ncomms16041-s4.xlsx-sheet1-Supplementary_Data_3_Predicted_upstream_transcription_factors_of_M_LPS_-_signatures_using_Ingenuity_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
CP66-MEL	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
CTCF_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PTSD - Post-traumatic stress disorder_Peripheral blood mononuclear cell_GSE860	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.71719
xylometazoline-2270	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
superficial stratum of m2B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3297
3-acetylcoumarin-5624	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04664
decreased body size	MPO Gene-Phenotype Associations	1.0	null
medrysone-2544	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
abnormal reproductive system physiology	MPO Gene-Phenotype Associations	1.0	null
CTCF_GM19239_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nucleus-vacuole junction	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.566
MAFK	ENCODE Transcription Factor Targets	1.0	null
Adrenocortical carcinoma_ACC_TCGA-P6-A5OF-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K57216724	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.66507
SNU685	CCLE Cell Line Gene CNV Profiles	1.0	1.4675
CRCGN014_HEPG2_3H:H15	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.31753
POLR2A	ENCODE Transcription Factor Targets	1.0	null
tooth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.104481
embryonic structure	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
POLR2A_small intestine_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.849898
r2 part of the trigeminal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.39057
MDA-MB-361	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
colorectal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.065869
BRD-A91404865	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17928
Sarcoma_SARC_TCGA-DX-A6BB-01A-12R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K15508005	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25319
polysensory temporal cortex (area 22p)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.25009
medial mammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.32244
H3K4me1_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
YY1	ENCODE Transcription Factor Targets	1.0	null
abnormal reproductive system morphology	MPO Gene-Phenotype Associations	1.0	null
trichostatin A-4526	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
practolol-3204	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PPARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5
BRD-K23840704	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.67251
KALS1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54219
striatum_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.29101
SPARC_Deficiency_GDS3636_524_mouse_Lens epithelium	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
betaxolol-3208	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_fibroblast of pulmonary artery_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13235
Brain Lower Grade Glioma_LGG_TCGA-HT-7689-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
decitabine-920	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K21479004	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06304
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.219
Anteromedial visual area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.30006
CTCF_MCF-7_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r2 part of lateral pontine nuclei	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.62183
CTCF_GM12873_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal circulating hormone level	MPO Gene-Phenotype Associations	1.0	null
MZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06395
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
BRD-A38066207	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.05983
USP2_KO_GSE43517_20_mouse_kidney	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
BRD-K45732260	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22515
cholera	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.838066
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04496
umbilical vein endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.197846
RAD21_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K14961381	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.711
hsa-miR-3918	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
atropine methonitrate-6495	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
pontine raphe nucleus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.939394
Internal female genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
anterior (rostral) cingulate (medial prefrontal) cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.52987
ChIP_H3K9me3_19884255_mouseESC	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
primary visual cortex (striate cortex, area V1/17)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.860276
ventrolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.42397
r1 part of basomedial reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.07946
interpeduncular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.4249
reduced female fertility	MPO Gene-Phenotype Associations	1.0	null
OCUM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892184
Superior olivary complex, periolivary region	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11674
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
r4 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.72705
icSARS CoV_0Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.25223
PXDN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25653
Hypertrophy	CTD Gene-Disease Associations	1.0	1.40036
Rocky Mountain spotted fever	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.163
CRCGN017_MCF10A.TP53.M_24H:O21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.36685
EW-22	GDSC Cell Line Gene Expression Profiles	-1.0	-1.9127
Pachytene cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.891
AIRE_KO_GDS2274_245_mouse_Medullary thymic epithelial cells (with low CD80 expression)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
rostral ventral respiratory cell group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.09301
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826719
ZNF143	ENCODE Transcription Factor Targets	1.0	null
BRD-K74324157	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38445
gestational trophoblastic neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.499231
YY1_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12868_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Anteromedial visual area, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.12037
CA46	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911634
r2 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.26408
mammalian phenotype	MPO Gene-Phenotype Associations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5008-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055572
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8QA-01A-11R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDAMB361	CCLE Cell Line Gene CNV Profiles	1.0	2.44452
SNU1077	CCLE Cell Line Gene Expression Profiles	1.0	3.40793
ethanol_mus musculus_gpl6105_gds3703	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_fibroblast of gingiva_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H650	COSMIC Cell Line Gene Mutation Profiles	1.0	null
alveolar sac	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.217762
BRD-K28720546	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.40139
BRD-K38750802	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.75219
ozagrel-5983	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PAX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.0656
BRD-K27472340	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58947
HS255T	CCLE Cell Line Gene Expression Profiles	1.0	1.65003
Crus 2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.30942
Nymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.994
SMC3_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9me3_G1E_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
Trachea	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.87898
desoxycortone-3099	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SKNFI	CCLE Cell Line Gene Expression Profiles	-1.0	-2.08896
BRD-K72083510	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.98626
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27821
CRCGN014_HEPG2_24H:P03	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.93168
BRD-K27406233	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37403
LOXL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6972
CTCF_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal postnatal growth/weight/body size	MPO Gene-Phenotype Associations	1.0	null
CTCF_GM12878_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPB	JASPAR Predicted Transcription Factor Targets	1.0	null
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61968
Brain Lower Grade Glioma_LGG_TCGA-S9-A6WL-01A-21R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
primary visual cortex (striate cortex, area V1/17)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.8881
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040889
8-MG-BA	GDSC Cell Line Gene Expression Profiles	1.0	1.47208
BRD-K19168437	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18723
Pigment granule membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.538
choriocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.276158
Meiotic recombination initiation complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.861
A3/KAW	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.993309
laterodorsal part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.37517
layer 1 of InsCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24837
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04496
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.9867
Syncytiotrophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.759
methylergometrine-3222	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
boldine-4004	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
membrane part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042049
G401	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52323
trypomastigote	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.431077
496100318_PCx_probable Alzheimer's disease_TBI_100+_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	10.7015
Brain Lower Grade Glioma_LGG_TCGA-DB-A75P-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ventral posterior medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.970478
periodontium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.152778
paracentral lobule, posterior part, left, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.2588
HCC1395	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38825
BICR31	CCLE Cell Line Gene Expression Profiles	1.0	1.44759
rosiglitazone_mus musculus_gpl1261_gse11343	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
5252917-828	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Umbilical artery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.766
substantia nigra reticulata, m1 part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.63213
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34136
Extravillous trophoblast cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.153
Zic3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.6836
Piriform area, polymorph layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.26947
primary somatosensory cortex (area S1, areas 3,1,2)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.903894
vascular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.100925
YARS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09631
ventrolateral prefrontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.25385
BRD-K62346407	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.72385
BRD-K78003637	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03068
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8467
CTCF_choroid plexus epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_HL-60_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
retromammillary area, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.56391
Bladder Urothelial Carcinoma_BLCA_TCGA-ZF-AA4N-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
BRD-A64523751	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04169
Starch utilization system complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.966
posteroventral (inferior) parietal cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.959275
debrisoquine-3207	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Labyrinthine zone	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.727
rosiglitazone_mus musculus_gpl7202_gse19896	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
absent somatotrophs	MPO Gene-Phenotype Associations	1.0	null
BRD-K52202153	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24653
Midbrain, behavioral state related	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.33253
retromammillary area, medial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.77357
CTCF_astrocyte of the cerebellum_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SOX2-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Mammillary body	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.5247
RAD21_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
BRD-K88448214	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26622
CAKI1	CCLE Cell Line Gene CNV Profiles	1.0	1.4287
ESR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.018
Nerve Degeneration	CTD Gene-Disease Associations	1.0	1.09471
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1BL-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF-33576154-HUMAN-HILARLN-PROSTATECANCER	ChEA Transcription Factor Targets 2022	1.0	null
Orbital area, lateral part, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4538
Placental Abnormalities (Excl Neoplasms)	DisGeNET Gene-Disease Associations	1.0	null
layer 3 of VPrP cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1259
inner SZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.2891
BRD-A90249268	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58687
ventral tegmental area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.82006
CRCGN015_MCF10A.TP53.M_24H:L09	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.4486
Riboflavin synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.121
area postrema	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.90914
H3118	COSMIC Cell Line Gene Mutation Profiles	1.0	null
small intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.316224
RBBP5_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
iohexol-2461	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.70706
JAK-STAT signaling pathway	KEGG Pathways 2026	1.0	null
metal ion binding	GO Molecular Function Annotations 2015	1.0	null
M-1	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.06134
BRD-A14331394	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28445
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.691676
AGAP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53959
Substantia nigra, reticular part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00568
Brain Lower Grade Glioma_LGG_TCGA-DU-5874-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_GM12878_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CADM1_Deficiency_GDS2027_722_mouse_Testis	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
CTCF_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_kidney epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4945-01A-01R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tail of caudate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.17201
labyrinthine zone	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.495701
Flocculus, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.09365
NELFE_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GLIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.578
MEWO	CCLE Cell Line Gene CNV Profiles	1.0	1.7134
Bladder Urothelial Carcinoma_BLCA_TCGA-FJ-A3ZF-01A-11R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
extracellular region	GO Cellular Component Annotations 2015	1.0	null
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.684
CTCF_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MZ in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.62725
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.80303
PARP2_KD_GSE43981_676_human_HepG2	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
colorectal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071021
BRD-K14645917	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19382
PMC8528285-pbio.3001085.s010.xlsx-Fig_7A-MAX_WT_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
pyrithyldione-2740	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MAFK_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K77700305	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20487
SK-N-SH	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.830376
subgenual (subcallosal) division of MFC (area 25)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.30661
Pituitary Dwarfism	DisGeNET Gene-Disease Associations	1.0	null
BRD-K22875057	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65751
periventricular stratum of RMa	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.76097
bucladesine-2741	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
chorion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.19886
BRD-K27971671	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46935
LY2	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.824977
Placental cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.769
chp3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.732
DG-75	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RAD21_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Perturb_17578_KD_ASCL2_SRP271644	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
HEP3B217	CCLE Cell Line Gene Expression Profiles	1.0	1.36699
abnormal pituitary gland morphology	MPO Gene-Phenotype Associations	1.0	null
posterior orbital gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.884765
diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.52512
NCI-H226	GDSC Cell Line Gene Expression Profiles	-1.0	-1.56043
superficial stratum of r2BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11697
KDM2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67365
BT483	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.725827
Chitosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.136
GPATCH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23139
Weight Gain	DisGeNET Gene-Phenotype Associations	1.0	null
CTCF_fibroblast of foreskin _hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.907865
Placenta	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
abnormal adenohypophysis morphology	MPO Gene-Phenotype Associations	1.0	null
BRD-K26351062	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04231
ZNF675	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.4596
acute promyelocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.320227
BRD-K63892915	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.38988
extracellular region	LOCATE Curated Protein Localization Annotations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5462-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VZ in subcallosal region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.04164
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	83.9824
gemfibrozil-5069	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A63759745	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1497
superficial stratum of r9BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.05833
CTCF_HGPS cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
chlorcyclizine-3810	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_SK-N-SH_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.00894
CTCF_epithelial cell of proximal tubule_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4818-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
famprofazone-4309	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Placenta cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.327
Johnston's organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.612
Superior olivary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.07149
ventrolateral prefrontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.06459
Bipolar Disorder_Cerebral cortex_GSE12649	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.59827
lateral ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.08153
BRD-K46815273	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22637
VEGF_A_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
CTCF_foreskin fibroblast_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.95227
abnormal adipose tissue morphology	MPO Gene-Phenotype Associations	1.0	null
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059027
bhk cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.1927
Extravillous trophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.154
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27821
bewo cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.636785
levodopa-4571	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
fluphenazine-4461	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K52872067	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.4903
BRD-K39068840	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29405
PIGQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81825
H3K27me3_CH12.LX_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_ECC-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_spleen_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
icSARA deltaORF6_0Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.37789
primary motor cortex (area M1, area 4)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.11627
BRD-K36531580	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.73555
dyclonine-2392	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Essential Thrombocytemia_Thrombocyte_GSE2006	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.57177
Cytotrophoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.231
Magnocellular reticular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10055
BRD-K28107603	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1598
Presubiculum, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26072
stratum radiatum of rostral CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.18568
BRD-K71093375	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04863
r5 part of posteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.43999
HUP-T3	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
WM2664	DepMap CRISPR Gene Dependency	1.0	2.55375
Femoral neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.302
H3K27me3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12868_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
CHP212	CCLE Cell Line Gene CNV Profiles	1.0	2.15959
BT549	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34399
ventrolateral prefrontal cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.831305
PANC0203	CCLE Cell Line Gene CNV Profiles	1.0	1.3283
H3K27me3_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Plant ovule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.82
superficial stratum of r5Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.43976
BRD-K47419679	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05886
primary auditory cortex (core)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05786
Prostatic Diseases	CTD Gene-Disease Associations	1.0	1.01776
carcinosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.460506
kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06125
Aiolos_NULL MUTATION_GDS3473_572_mouse_Bone marrow pre-BII cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
CTCF_GM12801_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17966
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4319
BRD-A49544621	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28964
JUND_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Pituitary Dwarfism I	DisGeNET Gene-Disease Associations	1.0	null
r6 part of paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19925
CTCF_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_MEL cell line_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disproportionate dwarf	MPO Gene-Phenotype Associations	1.0	null
253J-BV cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.822
Organism form	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
MDA MB435	BioGPS Cell Line Gene Expression Profiles	1.0	1.38687
isotretinoin_homo sapiens_gpl8300_gds3215	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
V, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.597
neuro2a	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.959219
IBMX	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.4261
temporal muscle trigeminal motor cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.95401
placenta	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
superficial stratum of r1BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.83556
anterior (rostral) cingulate (medial prefrontal) cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.96472
Isolated Gonadotropin Deficiency	DisGeNET Gene-Disease Associations	1.0	null
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.303
DDX27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76455
meclofenoxate-4268	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FOS	JASPAR Predicted Transcription Factor Targets	1.0	null
CP-319743-7532	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
888	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.830376
Chorion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.593
intermediate stratum of m1AL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19575
supramammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.11127
diphenhydramine-6020	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Starch grain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.578
paravermis of cerebellum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.53019
subbrachial nucleus, rostral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.42849
abnormal timing of vaginal opening	MPO Gene-Phenotype Associations	1.0	null
BRD-K72379955	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02495
CTCF_MEL cell line_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.353
Amelanotic melanoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.02
respiratory failure	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.125814
Chorionic plate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.961
locus ceruleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.51118
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55777
Pallidum, caudal region	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24306
H3K27me3_Pancreatic Islets	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RUNX2	JASPAR Predicted Transcription Factor Targets	1.0	null
CTCF_fibroblast of lung_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Plantlet	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.042
RAD21_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-NA-A4R1-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
receptor binding	GO Molecular Function Annotations 2015	1.0	null
KPL1	CCLE Cell Line Gene CNV Profiles	1.0	1.65596
HCC1428	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.69704
BRD-K90697693	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.15413
CTCF_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
small pituitary gland	MPO Gene-Phenotype Associations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4341-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superficial stratum of r2Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00589
CTCF_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Placental choriocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.148
NCIH522	CCLE Cell Line Gene CNV Profiles	1.0	1.36029
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6951
PMC10539177-41375_2023_2003_MOESM2_ESM.xlsx-CCF-Gene_PITX1	Rummagene Transcription Factor Associations 2026	1.0	null
striatum_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.23034
EP300_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
haloperidol-983	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
pulmonary edema	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.222136
estradiol_mus musculus_gpl4134_gse23072	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
lateral part of MM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.0276
GAS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31537
indapamide-3970	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
binding	GO Molecular Function Annotations 2015	1.0	null
SAOS-2	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.013
Extrahaustorial matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.068
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17625
Crus 2, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07514
BRD-K39206254	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01861
TTC549	DepMap CRISPR Gene Dependency	1.0	5.38131
CRCGN015_HEPG2_48H:P06	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	6.37423
BRD-K35923751	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49324
mebeverine-3193	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cranium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.124549
SYK_knockdown_190_GSE54065	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.69206
Anteromedial visual area, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.3748
bupivacaine-5112	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K62572662	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.99398
abnormal female reproductive system physiology	MPO Gene-Phenotype Associations	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.07883
CAMA1	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.835796
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051207
medial parabrachial nucleus,right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.06131
pre-B-lymphocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.719
superficial stratum of PcPV	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.67241
CTCF_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Muscle Rigidity	DisGeNET Gene-Phenotype Associations	1.0	null
laterorostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.73438
intermediate stratum of r5Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29354
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4639-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
connecting stalk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.144625
PIGF_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
BRD-K51131084	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12397
RAD21_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Interpeduncular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.1781
H2BK15ac_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
BRD-K57688676	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23938
CTCF_BE2C_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inferolateral temporal cortex (area TEv, area 20)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.985319
Piriform area, pyramidal layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.53382
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.95227
hsa-miR-654-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4968-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inner SZ in ventromedial extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07182
ADRA2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07334
Hemocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.886
primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.955317
caudal interpeduncular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.63583
Melanosome membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.541
HCC1428	CCLE Cell Line Gene CNV Profiles	1.0	1.52201
cisplatin_mus musculus_gpl339_gds3099	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
raloxifene-2738	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EBF1	ENCODE Transcription Factor Targets	1.0	null
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42559
PUR1	MotifMap Predicted Transcription Factor Targets	1.0	null
WSU-NHL	GDSC Cell Line Gene Expression Profiles	1.0	2.25423
CTCF_MCF-7_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EBF1_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.74243
JJN3	CCLE Cell Line Gene Expression Profiles	1.0	1.37483
BRD-K17060750	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12128
CTCF_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04496
Abductor	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.525
protein binding	GO Molecular Function Annotations 2015	1.0	null
layer 1 of LPrP cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12509
Anterior lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.19
CTCF_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
velnacrine-6651	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
Isolated Deficiency Of Pituitary Hormone	DisGeNET Gene-Disease Associations	1.0	null
TBP_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posteroventral (inferior) parietal cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.873943
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3316-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
umbilical vein endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.227795
central portion of GPi	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.996784
r8 part of inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.47281
organism form	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
pretectal region	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.953064
CTCF_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HS 578T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13991
BRD-K25757224	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1078
BRD-K34942615	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.97507
BRD-K79777851	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07271
sublayer 6b of OCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.4355
intermediate stratum of m2Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.11492
medial part of r1B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.17221
Exoskeleton	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.921
MLKL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83276
CTCF_GM12872_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Isolated growth hormone deficiency type IB	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.214
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28785
MAML3	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K82781769	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25825
CTCF_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
choriocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.284607
BRD-K95795676	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45981
internal female genital organ	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.53602
CTCF_brain_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RBBP5	ENCODE Transcription Factor Targets	1.0	null
RMGI	DepMap CRISPR Gene Dependency	1.0	5.86294
CTCF_GM12875_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sulfamerazine-6036	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_mammary epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TIA1_KO_GSE54418_266_mouse_liver	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
ZBTB7C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5792
demeclocycline-4267	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
biological_process	GO Biological Process Annotations 2015	1.0	null
CTCF_SK-N-SH_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
small adenohypophysis	MPO Gene-Phenotype Associations	1.0	null
dorsolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.00187
HCC1395	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.59992
Posterior complex of the thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05313
growth hormone receptor signaling pathway	GO Biological Process Annotations 2023	1.0	null
H3K27me3_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1897	CCLE Cell Line Gene CNV Profiles	1.0	1.33811
H3K4me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HOP92	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.882992
OVCAR4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44298
colorectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066317
BRD-K72967213	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00993
MAFF	ENCODE Transcription Factor Targets	1.0	null
cisplatin_mus musculus_gpl339_gse6206	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SMC3	ENCODE Transcription Factor Targets	1.0	null
MN-60	COSMIC Cell Line Gene Mutation Profiles	1.0	null
r3 part of dorsal parvicellular reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.39153
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
positive regulation of receptor signaling pathway via JAK-STAT	GO Biological Process Annotations 2023	1.0	null
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5909
CTCF_LNCaP clone FGC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
amygdaloid complex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.25609
mafenide-5499	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Nucleus of the lateral lemniscus, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04882
estradiol_mus musculus_gpl4134_gse23241	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06841
Lung adenocarcinoma_LUAD_TCGA-44-A479-01A-31R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
icSARA deltaORF6_48Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.02402
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.475423
Impaired Glucose Tolerance	DisGeNET Gene-Phenotype Associations	1.0	null
PL4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Bed nuclei of the stria terminalis, anterior division, dorsomedial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10331
prazosin-826	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
dexpropranolol-3553	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Entorhinal area, medial part, ventral zone, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.877
Four-helical cytokine-like, core	InterPro Predicted Protein Domain Annotations	1.0	null
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.657
NCIH1105	CCLE Cell Line Gene Expression Profiles	-1.0	-2.5285
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22704
CRCGN017_MCF10A.WT.HP_24H:A21	Carcinogenome Chemical Perturbation Carcinogenicity Signatures	1.0	2.26106
PMC8292420-41598_2021_94064_MOESM5_ESM.xlsx-Sheet1-Supplementary_Table_S4_AA_ESCC_SNVs_and_short_InDels_that_were_previously_identified_and_listed_in_COSMIC_database_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
dorsal subnucleus of MG	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.01655
TBP	ENCODE Transcription Factor Targets	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.620621
D-247MG	GDSC Cell Line Gene Expression Profiles	-1.0	-1.86132
mouth	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.405935
orbital frontal cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.05159
Prestwick-860-5679	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.348
dehydrocholic acid-5681	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KP-N-YN	COSMIC Cell Line Gene Mutation Profiles	1.0	null
skin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067075
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.403
OCI-AML3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.993309
meticrane-5984	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Hyperglycemia	CTD Gene-Disease Associations	1.0	1.09401
CTCF_fibroblast of mammary gland_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Prostatitis	CTD Gene-Disease Associations	1.0	1.01174
COV644	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28785
MAML2	Pathway Commons Protein-Protein Interactions	1.0	null
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Cervical spine	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.933
valproic acid-1181	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_fibroblast of foreskin _hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC8528285-pbio.3001085.s010.xlsx-Fig_S7B-GENE_LIST_UPLOADED_TO_ENRICHR_MAX_WT_TESTES_874_GENES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K99338550	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00098
Retrosplenial area, lateral agranular part, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.73615
CTCF_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TIA1_KO_GSE54418_263_mouse_spinal cord	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
syrosingopine-6213	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posterior (ventral) nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27699
COPS7B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49322
abnormal diencephalon morphology	MPO Gene-Phenotype Associations	1.0	null