association	dataset	threshold value	standardized value
gonad	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
regulation of cellular protein metabolic process	GO Biological Process Annotations 2015	1.0	null
hsa-miR-3920	TargetScan Predicted Conserved microRNA Targets	1.0	0.419947
hsa-miR-4740-5p	TargetScan Predicted Conserved microRNA Targets	1.0	0.187098
cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.046892
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.623504
GSE231720,GSE231724_3_v_1_setd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.47369
abnormality of reproductive system physiology	HPO Gene-Disease Associations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-5963-02A-12R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE223893_2_v_9_setd2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Cystic fibrosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.548
ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.074047
Lung squamous cell carcinoma_LUSC_TCGA-60-2726-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
gave	GeneRIF Biological Term Annotations	1.0	null
Endodermal sinus tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.021
Sto	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.812
organelle	LOCATE Curated Protein Localization Annotations	1.0	null
Cryptorchidism	DisGeNET Gene-Disease Associations	1.0	null
GSE174498,GSE174500_2_v_7_asparaginase_human	RummaGEO Drug Perturbation Signatures	1.0	null
promote	GeneRIF Biological Term Annotations	1.0	null
peroxisome	LOCATE Predicted Protein Localization Annotations	1.0	null
hsa-miR-4438	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
outer SZ in dorsolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.989784
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043241
single organism reproductive process	GO Biological Process Annotations 2015	1.0	null
Intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
Spermatogenic failure 9	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.955
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A3ES-06A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Patau syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.392
organic cyclic compound binding	GO Molecular Function Annotations 2015	1.0	null
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.990676
supporting cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.264011
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19B-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3942-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.193083
basic	GeneRIF Biological Term Annotations	1.0	null
Ovarian follicular epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.035
MCF 10A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48216
hsa-miR-4320	TargetScan Predicted Conserved microRNA Targets	1.0	0.598666
Testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.777
888	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32391
RAF1_activemutant_219_GSE42964	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.17899
hsa-miR-513a-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.361556
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GU-06A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3669	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
inferior olive, medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.2932
ribonucleoprotein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.334733
GC-1 spg cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.041
heterocyclic compound binding	GO Molecular Function Annotations 2015	1.0	null
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.231482
Somatic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.085
hsa-miR-606	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
HDA1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.637
review	GeneRIF Biological Term Annotations	1.0	null
Distal tip cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.983
SW 48	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3972
hsa-miR-362-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
hsa-miR-4729	TargetScan Predicted Conserved microRNA Targets	1.0	0.714812
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70015
Renal agenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.198
Sperm individualization complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.523
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Orchitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.743
positive regulation of macromolecule metabolic process	GO Biological Process Annotations 2015	1.0	null
GSE223893_11_v_9_setd2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Inactive sex chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.209
organelle	GO Cellular Component Annotations 2015	1.0	null
tandem	GeneRIF Biological Term Annotations	1.0	null
18786252-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Condensed chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.95
KNS42	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39909
hsa-miR-548am	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
496100278_FWM_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.39039
Cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.06868
microbody	LOCATE Predicted Protein Localization Annotations	1.0	null
severely	GeneRIF Biological Term Annotations	1.0	null
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.53286
realtime	GeneRIF Biological Term Annotations	1.0	null
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.467
Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WX-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
deleted	GeneRIF Biological Term Annotations	1.0	null
spermatogenesis	GO Biological Process Annotations 2015	1.0	null
nucleus	GO Cellular Component Annotations 2025	1.0	null
Hypobranchial	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.779
whereas	GeneRIF Biological Term Annotations	1.0	null
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.966222
hsa-miR-144	TargetScan Predicted Conserved microRNA Targets	1.0	0.348832
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.7143
hsa-miR-4515	TargetScan Predicted Conserved microRNA Targets	1.0	0.127531
Vein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.822
hsa-miR-1261	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Kartagener syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.203
CatSper complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.14
among	GeneRIF Biological Term Annotations	1.0	null
primordial	GeneRIF Biological Term Annotations	1.0	null
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
correspond	GeneRIF Biological Term Annotations	1.0	null
Autosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.273
Ooplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.097
under	GeneRIF Biological Term Annotations	1.0	null
Chorionic villus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.949
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.984948
hypoglossal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10144
Transverse filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.22
GLIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.4346
hsa-miR-491-3p	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
hsa-miR-1269	TargetScan Predicted Conserved microRNA Targets	1.0	0.997906
sertoli	GeneRIF Biological Term Annotations	1.0	null
HEC108	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88979
Nuclear meiotic cohesin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.879
chromatoid body	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.517348
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7059-11A-01R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
central nuclear group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.915884
hsa-miR-590-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.088999
Hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.869
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3JX-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF740	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	165.022
Axoneme	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.482
pcr	GeneRIF Biological Term Annotations	1.0	null
cerebellar vermis	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10441
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.600644
regulation of gene expression	GO Biological Process Annotations 2015	1.0	null
RNP body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.919
hsa-miR-4635	TargetScan Predicted Conserved microRNA Targets	1.0	0.419947
dazap1	GeneRIF Biological Term Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5494-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.428
needs	GeneRIF Biological Term Annotations	1.0	null
Germ cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.901
MKN74	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46812
HES1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7992
outer SZ in dorsomedial extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.19702
Germarium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.523
lower limb region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06545
Breast Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A5ZE-01A-11R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
regulation of protein metabolic process	GO Biological Process Annotations 2015	1.0	null
mitochondrial matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.185469
Embryonal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.173
Ovary epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.6
methylation	GeneRIF Biological Term Annotations	1.0	null
gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.887622
Azoospermia	DisGeNET Gene-Disease Associations	1.0	null
mrnas	GeneRIF Biological Term Annotations	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A3F3-06A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KLF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.0968
Prader-Willi Syndrome	DisGeNET Gene-Disease Associations	1.0	null
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.743671
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.339
46,XX sex reversal	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.803
embryonic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.2723
hsa-miR-452	TargetScan Predicted Conserved microRNA Targets	1.0	0.085563
since	GeneRIF Biological Term Annotations	1.0	null
KLF10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	112.525
SP in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.849346
activates	GeneRIF Biological Term Annotations	1.0	null
Azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.754
patterns	GeneRIF Biological Term Annotations	1.0	null
Venous blood cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.645
positive regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
Ribonuclease P complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.936
Gonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.325
hsa-miR-4531	TargetScan Predicted Conserved microRNA Targets	1.0	0.541706
hsa-miR-3614-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
XBP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5095
Gonadoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.23
suggests	GeneRIF Biological Term Annotations	1.0	null
RERFLCMS	CCLE Cell Line Gene CNV Profiles	1.0	1.7813
male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.37773
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.888444
hsa-miR-3130-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
premeiotic	GeneRIF Biological Term Annotations	1.0	null
Cell septum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.851
Tentacle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.548
Prostate adenocarcinoma_PRAD_TCGA-VP-A87J-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sperm	GeneRIF Biological Term Annotations	1.0	null
Mature ovarian follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.417
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A4FD-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
female reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Spermatheca	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.174
Bulbourethral gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.536
translationally	GeneRIF Biological Term Annotations	1.0	null
ZNF708	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.4134
idiopathic	GeneRIF Biological Term Annotations	1.0	null
Hypodermal seam cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.521
Microgametophyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.852
azfc	GeneRIF Biological Term Annotations	1.0	null
azoospermiaoligospermia	GeneRIF Biological Term Annotations	1.0	null
gonadoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.89541
abducens nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.896907
Varicose veins	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.016
there	GeneRIF Biological Term Annotations	1.0	null
Hindgut	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.082
relationship	GeneRIF Biological Term Annotations	1.0	null
transient Purkinje cell clusters	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.941363
cellonly	GeneRIF Biological Term Annotations	1.0	null
Kidney Chromophobe_KICH_TCGA-KL-8339-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U4-06A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GCM2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9734
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044038
Turner syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.02
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
CW-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Spermatogenic Failure	DisGeNET Gene-Disease Associations	1.0	null
outer SZ in orbital frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.09254
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.291
urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.981
496100436_FWM_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.26911
PMC4784386__F5	PFOCR Pathway Figure Associations 2024	1.0	null
Inhibin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.475
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4166-01A-02R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
deletions	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-664	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
oligospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.62247
HEL9217	CCLE Cell Line Gene CNV Profiles	1.0	1.44276
medioventral part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.989279
Sperm head	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.678
DAZAP2	Pathway Commons Protein-Protein Interactions	1.0	null
oligozoospermic	GeneRIF Biological Term Annotations	1.0	null
Oligospermia	HuGE Navigator Gene-Phenotype Associations	1.0	null
hsa-miR-1270	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
Ctenidium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.287
PMC7396672__F6	PFOCR Pathway Figure Associations 2024	1.0	null
Spermatocytoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.959
intracellular part	GO Cellular Component Annotations 2015	1.0	null
496100502_TCx_dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.38466
Hypogonadotropic hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.859
Y-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.981
Lung squamous cell carcinoma_LUSC_TCGA-34-5231-01A-21R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ciliary plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.482
Reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.22
dazi	GeneRIF Biological Term Annotations	1.0	null
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.368624
gamete generation	GO Biological Process Annotations 2015	1.0	null
U343	CCLE Cell Line Gene CNV Profiles	1.0	2.15139
Tadpole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.93
subfertility	GeneRIF Biological Term Annotations	1.0	null
membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
abnormal spermatogenesis	HPO Gene-Disease Associations	1.0	null
Sperm plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.842
lateral reticular nucleus (principal part)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.5069
regulation of translational initiation	GO Biological Process Annotations 2023	1.0	null
ELK4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9122
mitochondrial cloud	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.07207
eukaryotic translation initiation factor 3 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.233101
within	GeneRIF Biological Term Annotations	1.0	null
ZBTB11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4033
Sperm flagellum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.412
Chromatoid body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.735
pabp	GeneRIF Biological Term Annotations	1.0	null
cryptorchid	GeneRIF Biological Term Annotations	1.0	null
predisposition	GeneRIF Biological Term Annotations	1.0	null
Female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.442
Obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.005
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5887-11A-01R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
daz1daz2	GeneRIF Biological Term Annotations	1.0	null
cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.341529
Exodeoxyribonuclease V complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.709
ZNF701	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	88.5529
Klinefelter syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.649
rostral (anterior) extramural migratory stream	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.89703
charge	GeneRIF Biological Term Annotations	1.0	null
W chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.523
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.638
Rectum adenocarcinoma_READ_TCGA-EI-6882-01A-11R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-DX-A48K-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ejaculatory duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.747
subdeletions	GeneRIF Biological Term Annotations	1.0	null
testis	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
496100503_HIP_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.83878
represent	GeneRIF Biological Term Annotations	1.0	null
BOLL	Pathway Commons Protein-Protein Interactions	1.0	null
principal sensory nucleus of trigeminal nerve	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.09343
Prostate Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
DMS79	CCLE Cell Line Gene CNV Profiles	1.0	1.96851
hsa-miR-4482	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
azoospermia; chromosome deletion; infertility, male; oligospermia; sex chromosome aberrations; sex chromosome disorders of sex development	GAD Gene-Disease Associations	1.0	null
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
x chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.191456
Seminiferous epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.733
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
mRNA binding	GO Molecular Function Annotations 2023	1.0	null
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.102
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5KH-06A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-629	TargetScan Predicted Conserved microRNA Targets	1.0	0.154935
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.858301
outer plexiform zone in extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.10936
due	GeneRIF Biological Term Annotations	1.0	null
Vitellarium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.794
membrane-enclosed lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.189222
PMC4784386__F5	PFOCR Pathway Figure Associations 2023	1.0	null
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
positive regulation of gene expression	GO Biological Process Annotations 2015	1.0	null
PPARD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.0157
chromosome	GeneRIF Biological Term Annotations	1.0	null
NKX2-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0882
CAL 54	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939222
IGR1	CCLE Cell Line Gene CNV Profiles	1.0	1.42988
Paraspeckles	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.794
Outer dense fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.448
Embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.158
IZ in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.02266
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846023
Bacteriocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.597
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58377
Sarcoma_SARC_TCGA-FX-A3TO-01A-11R-A22K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Luteal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.019
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.039311
risk	GeneRIF Biological Term Annotations	1.0	null
Synaptonemal complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.295
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	12.328
KE97	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32997
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16069
Turner Syndrome	DisGeNET Gene-Disease Associations	1.0	null
cgi	GeneRIF Biological Term Annotations	1.0	null
multicellular organismal development	GO Biological Process Annotations 2015	1.0	null
Male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.772
Scrotum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.501
prone	GeneRIF Biological Term Annotations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4696-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5044
SP9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.3245
highly	GeneRIF Biological Term Annotations	1.0	null
Ovarian follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.479
report	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-4790-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
Male Sterility	DisGeNET Gene-Phenotype Associations	1.0	null
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
believed	GeneRIF Biological Term Annotations	1.0	null
chromatid	GeneRIF Biological Term Annotations	1.0	null
bind	GeneRIF Biological Term Annotations	1.0	null
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939222
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
primary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.34963
Male Infertility	DisGeNET Gene-Phenotype Associations	1.0	null
called	GeneRIF Biological Term Annotations	1.0	null
fish	GeneRIF Biological Term Annotations	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10579
endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
Infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.04
cytoplasmic chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.213322
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-A69E-01A-11R-A31O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
regulation of cellular macromolecule biosynthetic process	GO Biological Process Annotations 2015	1.0	null
Lateral element	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.512
Oligospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.094
hsa-miR-4799-5p	TargetScan Predicted Conserved microRNA Targets	1.0	0.997906
RREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	270.909
Zona pellucida	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.267
parasubicular cortex (parasubiculum)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.882117
rostral division of OFCi (area 11)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.95205
regulation of translation	GO Biological Process Annotations 2015	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.869794
Branch	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.581
hsa-miR-548ae	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Caput epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.747
496100431_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.18075
ZNF354C	JASPAR Predicted Transcription Factor Targets	1.0	null
Ciliopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.159
ZNF75D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3448
head and face region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.3469
PRDM1	JASPAR Predicted Transcription Factor Targets	1.0	null
MZ in primary somatosensory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.23452
simultaneously	GeneRIF Biological Term Annotations	1.0	null
Congenital adrenal hyperplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.119
vegetative cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.176802
Embryonic germ cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.935
Acrosomal vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.057
Centriole	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.241
m15	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.731
Ciliary pocket collar	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.926
IZ in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.39917
external granular (germinal) layer of lower rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.05297
frequency	GeneRIF Biological Term Annotations	1.0	null
products	GeneRIF Biological Term Annotations	1.0	null
pontine nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.962957
hsa-miR-548f	TargetScan Predicted Conserved microRNA Targets	1.0	0.165047
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-H8-A6C1-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Blastomere	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.371
Germinal vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.54
Male pronucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.824
ychromosome	GeneRIF Biological Term Annotations	1.0	null
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053704
mRNA stabilization	GO Biological Process Annotations 2023	1.0	null
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.486
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7044-11A-01R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.6123
population	GeneRIF Biological Term Annotations	1.0	null
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
closely	GeneRIF Biological Term Annotations	1.0	null
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.359
HL-60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.97662
Prostate adenocarcinoma_PRAD_TCGA-HC-7752-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
daz1	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-28-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.688
hESC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.577
Vegetative cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.692
LN235	CCLE Cell Line Gene CNV Profiles	1.0	1.32779
infertility	GeneRIF Biological Term Annotations	1.0	null
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.912071
Tsu-Pr1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.604
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991518
Division septum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.906
hsa-miR-381	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
IZ in dorsomedial extrastriate cortex (V2)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.938468
polysome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.224558
PMC6080909-JEM_20171312_TableS1.xlsx-miR-196_predicted-Table_S1_miR-196a_b_predicted_targets_by_PITA_PicTar_TargetScan_and_DIANA_prediction_algorithms_ZFP1	Rummagene Transcription Factor Associations 2026	1.0	null
sister	GeneRIF Biological Term Annotations	1.0	null
Ovarian follicular epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.555
WM-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82327
GLIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.0759
HS618T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.85754
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.833395
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
HCC2935	CCLE Cell Line Gene CNV Profiles	1.0	1.54769
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48216
hsa-miR-300	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
ZNF281	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	141.429
NCIH2085	CCLE Cell Line Gene CNV Profiles	1.0	1.4302
stimulate	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-3171	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
Vas deferens	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.882
H9 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.83
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.6638
nucleus	GO Cellular Component Annotations 2015	1.0	null
inner CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.921481
pi-body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.107
CAMA1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34529
seminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.196459
normal	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-4755-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051388
scos	GeneRIF Biological Term Annotations	1.0	null
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
germ plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.390455
hsa-miR-509-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.092495
Embryonic stem cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.987
SP in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.847243
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.379499
Crystalline style	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.922
Adrenocortical carcinoma_ACC_TCGA-OR-A5J5-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A78R-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KL-8341-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
azoospermia	HPO Gene-Disease Associations	1.0	null
haplogroup	GeneRIF Biological Term Annotations	1.0	null
haplotypes	GeneRIF Biological Term Annotations	1.0	null
RFX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.1128
A3/KAW	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48216
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.623
Germinal disc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.714
molecular layer of caudal subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07483
developmental	GAD High Level Gene-Disease Associations	1.0	0.293278
Pancreatic adenocarcinoma_PAAD_TCGA-2L-AAQA-01A-21R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Peripheral blood lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.122
Coagulating gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.677
PMC7857731-elife-63093-supp1.xlsx-DEG_MITF-X6vsEV-SkMEL28-Unnamed_2_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
gametocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.195818
combined	GeneRIF Biological Term Annotations	1.0	null
SGS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.893
HCC1482	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Brain Lower Grade Glioma_LGG_TCGA-E1-5304-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE520	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50556
KLF17	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.752
Flagellate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.344
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	1.0758
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052
positive regulation of translational initiation	GO Biological Process Annotations 2023	1.0	null
Leydig cell hypoplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.247
OV56	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0197
EB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48829
pontobulbar body	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.15934
Physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.424
gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.57454
P-body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.365
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
KPNSI9S	CCLE Cell Line Gene CNV Profiles	1.0	1.93925
premature ovarian failure	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.217012
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.23604
pelvic varices	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.359289
KLF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	104.013
gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.491978
Steroid inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.102
male	GeneRIF Biological Term Annotations	1.0	null
internal male genital organ	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
hsa-miR-613	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
GSE138863_3_v_0_disulfiram_human	RummaGEO Drug Perturbation Signatures	1.0	null
strong	GeneRIF Biological Term Annotations	1.0	null
male gamete generation	GO Biological Process Annotations 2015	1.0	null
HES2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3057
mRNA 3'-UTR binding	GO Molecular Function Annotations 2025	1.0	null
PRDM9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	170.82
PMC7736222__F2	PFOCR Pathway Figure Associations 2024	1.0	null
Cryptorchidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.305
IZ in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.833014
Nerve ring	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.549
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4965-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Frond	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.808
cellular_component	GO Cellular Component Annotations 2015	1.0	null
Rectum adenocarcinoma_READ_TCGA-CI-6619-01B-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gravid adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.948
hsa-miR-4274	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.093
Secondary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.916
small molecule binding	GO Molecular Function Annotations 2015	1.0	null
cpg	GeneRIF Biological Term Annotations	1.0	null
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.229
severe	GeneRIF Biological Term Annotations	1.0	null
Chromosomal duplication syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.169
ZNF75A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2091
seems	GeneRIF Biological Term Annotations	1.0	null
Osphradium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.219
COLO-704	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16069
?sertoli-cell-only syndrome	OMIM Gene-Disease Associations	1.0	null
quantitative	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-548x	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Chondrodysplasia punctata	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.034
Intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
hsa-miR-4773	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
Inguinal hernia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
hsa-miR-4777-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.189
nucleus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
DAZAP1	Pathway Commons Protein-Protein Interactions	1.0	null
testicular cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.150326
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5919
recruitment	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-518a-5p	TargetScan Predicted Conserved microRNA Targets	1.0	0.90397
vein disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.135759
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10663
direct	GeneRIF Biological Term Annotations	1.0	null
Germinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.027
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05466
hsa-miR-526b	TargetScan Predicted Conserved microRNA Targets	1.0	0.670641
DuPro cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.936
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2ME-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Leydig cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.809
hsa-miR-548aj	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Acute Myeloid Leukemia_LAML_TCGA-AB-2838-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Klinefelter Syndrome	DisGeNET Gene-Disease Associations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-7636-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH1339	CCLE Cell Line Gene CNV Profiles	1.0	2.47344
mitochondrial nucleoid	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.214017
PUM2	Pathway Commons Protein-Protein Interactions	1.0	null
intracellular organelle	GO Cellular Component Annotations 2015	1.0	null
Sertoli cell-only syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.228
hsa-miR-539	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
mRNA 3'-UTR binding	GO Molecular Function Annotations 2023	1.0	null
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.393
nucleus	GO Cellular Component Annotations 2023	1.0	null
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.893
Ovarian cumulus cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.104
NR1H2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.8
premotor cortex (area 6)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.14354
gonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.410491
Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7H7-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE240386,GSE242143_1_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
ARNT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0752
values	GeneRIF Biological Term Annotations	1.0	null
boule	GeneRIF Biological Term Annotations	1.0	null
genetic	GeneRIF Biological Term Annotations	1.0	null
autosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.832761
asociation	GeneRIF Biological Term Annotations	1.0	null
female reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
hsa-miR-3140-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.828473
hsa-miR-4657	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
oocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.747515
Male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.656
positive regulation of translational initiation	GO Biological Process Annotations 2015	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-85-6560-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
abnormality of the genitourinary system	HPO Gene-Disease Associations	1.0	null
Female germ cell nucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.54
PMC9013128-NIHMS1795992-supplement-4.xlsx-501mel_ARID2_KO_Upregulated-Gene__name_ARID2	Rummagene Transcription Factor Associations 2026	1.0	null
NFKB1	JASPAR Predicted Transcription Factor Targets	1.0	null
SP8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.6814
adult	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.475812
Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3473-01A-01R-1193-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-US-A77E-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Radula	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.573
haplogroups	GeneRIF Biological Term Annotations	1.0	null
reuniens nucleus (medioventral nucleus) of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.1461
ZBED2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2259
semen	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.87133
Non-Obstructive Azoospermia	DisGeNET Gene-Disease Associations	1.0	null
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.763
duplicationmultiplication	GeneRIF Biological Term Annotations	1.0	null
Sperm flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.857
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939222
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4894-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
hsa-miR-548c-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.49473
prevalence	GeneRIF Biological Term Annotations	1.0	null
GOS3	CCLE Cell Line Gene CNV Profiles	1.0	2.49326
G402	CCLE Cell Line Gene CNV Profiles	-1.0	-2.29214
Pronucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.212
cellular process	GO Biological Process Annotations 2015	1.0	null
translation regulator activity, nucleic acid binding	GO Molecular Function Annotations 2015	1.0	null
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
interpositus (intermediate) nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.86695
altered	GeneRIF Biological Term Annotations	1.0	null
cent	GeneRIF Biological Term Annotations	1.0	null
Male infertility	WikiPathways Pathways 2024	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.599675
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.07485
Ciliary basal body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.827
TE617T	CCLE Cell Line Gene CNV Profiles	-1.0	-2.29507
pum2	GeneRIF Biological Term Annotations	1.0	null
positive regulation of protein metabolic process	GO Biological Process Annotations 2015	1.0	null
Oligoasthenozoospermia	DisGeNET Gene-Disease Associations	1.0	null
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SP in dorsomedial extrastriate cortex (V2)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.856263
SP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	91.8445
cytoplasm	LOCATE Curated Protein Localization Annotations	1.0	null
Ovarian dysfunction	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.077
multicellular organismal reproductive process	GO Biological Process Annotations 2015	1.0	null
sex chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.57817
regulation of cellular metabolic process	GO Biological Process Annotations 2015	1.0	null
gonosomal inheritance	HPO Gene-Disease Associations	1.0	null
seminiferous tubule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.775664
only	GeneRIF Biological Term Annotations	1.0	null
azoospermic	GeneRIF Biological Term Annotations	1.0	null
suggesting	GeneRIF Biological Term Annotations	1.0	null
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.97338
did	GeneRIF Biological Term Annotations	1.0	null
meiosis	GeneRIF Biological Term Annotations	1.0	null
Spermatogenic failure	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.422
Ebolavirus(EBOV)_3day_PBMCs_17725815_GSE8317	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.67136
male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.74525
Headfoot	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.866
regulation of biosynthetic process	GO Biological Process Annotations 2015	1.0	null
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874637
inner portion of medial ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.946666
regulation of translational initiation	GO Biological Process Annotations 2025	1.0	null
Azoospermia, Nonobstructive	DisGeNET Gene-Disease Associations	1.0	null
Chromosome Deletion	HuGE Navigator Gene-Phenotype Associations	1.0	null
Congenital bilateral absence of vas deferens	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.261
CTCF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	209.656
polytene chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.240276
variations	GeneRIF Biological Term Annotations	1.0	null
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
Lung adenocarcinoma_LUAD_TCGA-05-5429-01A-01R-1628-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4778-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.766596
Theca interna	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.215
Meiotic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.084
multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
NCI-H847	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05466
hsa-miR-4676-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.075559
496100334_PCx_probable Alzheimer's disease_no TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.20223
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042405
Sex Chromosome Aberrations	HuGE Navigator Gene-Phenotype Associations	1.0	null
Sex Chromosome Disorders of Sex Development	HuGE Navigator Gene-Phenotype Associations	1.0	null
KLF14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	84.5662
parasolitary nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.54301
oligozoospermia	GeneRIF Biological Term Annotations	1.0	null
Hypogonadotropic Hypogonadism	DisGeNET Gene-Disease Associations	1.0	null
Allantois	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.118
one	GeneRIF Biological Term Annotations	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
HEY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1631
infertile	GeneRIF Biological Term Annotations	1.0	null
dazdazl	GeneRIF Biological Term Annotations	1.0	null
additional	GeneRIF Biological Term Annotations	1.0	null
ovary	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.350001
ylinked	GeneRIF Biological Term Annotations	1.0	null
cytoplasmic part	LOCATE Predicted Protein Localization Annotations	1.0	null
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934274
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A180-06A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Epididymitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.045
Mesothelioma_MESO_TCGA-TS-A7PB-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superficial layers of olfactory entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	3.34509
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.888444
Face	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.682
spermatogenesis	GeneRIF Biological Term Annotations	1.0	null
positive regulation of translational initiation	GO Biological Process Annotations 2025	1.0	null
cumulus-oocyte complex	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.784
studies	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-196a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
MPP89	CCLE Cell Line Gene CNV Profiles	1.0	1.4616
developmental process	GO Biological Process Annotations 2015	1.0	null
phosphorylationinduced	GeneRIF Biological Term Annotations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6472-01A-11R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-HZ-A4BH-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.296
46,XY sex reversal 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.049
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A1Q5-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
stem	GeneRIF Biological Term Annotations	1.0	null
KLF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.7802
allow	GeneRIF Biological Term Annotations	1.0	null
Edwards syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.176
abnormality of the genital system	HPO Gene-Disease Associations	1.0	null
Germ plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.132
seminiferous epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.232039
hsa-miR-561	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.329
SP in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.909164
HCC2218	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48135
spermatogonium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.53238
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
azoospermialike	GeneRIF Biological Term Annotations	1.0	null
Nuclear cohesin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.585
Pelvic varices	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.194
biopsy	GeneRIF Biological Term Annotations	1.0	null
Htk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.688
SP in frontal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.91903
exchange	GeneRIF Biological Term Annotations	1.0	null
positive regulation of metabolic process	GO Biological Process Annotations 2015	1.0	null
Seminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.738
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
Seminoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.99
Fusome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.524
Pollen tube	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.662
nucleoside phosphate binding	GO Molecular Function Annotations 2015	1.0	null
Lsm2-8 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.603
subgranular zone of rostral dentate gyrus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.45439
feedback	GeneRIF Biological Term Annotations	1.0	null
production	GeneRIF Biological Term Annotations	1.0	null
oligozoospermia	GAD Gene-Disease Associations	1.0	null
cell part	GO Cellular Component Annotations 2015	1.0	null
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.888444
pole plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.385051
CL-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
LS1034	CCLE Cell Line Gene CNV Profiles	1.0	1.35607
GATA3	JASPAR Predicted Transcription Factor Targets	1.0	null
rna binding	GO Molecular Function Annotations 2015	1.0	null
9+2 motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.312
PMC8350546__F7	PFOCR Pathway Figure Associations 2024	1.0	null
Distal tip	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.924
secondary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.337256
outer portion of lateral ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.892985
infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.57957
PATZ1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	170.653
repeat	GeneRIF Biological Term Annotations	1.0	null
positive regulation of cellular metabolic process	GO Biological Process Annotations 2015	1.0	null
posttranscriptional regulation of gene expression	GO Biological Process Annotations 2015	1.0	null
el2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.932
Pole plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.13
CTCF	ENCODE Transcription Factor Targets	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.79146
PMC8844187-Table_2.xlsx-prostate-DLX1_DLX1	Rummagene Transcription Factor Associations 2026	1.0	null
thyroid	GTEx Tissue Gene Expression Profiles	-1.0	-1.56281
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4758-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.229
Teratoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.235
spermatid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.25637
Male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.594
Reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.642
hsa-miR-4434	TargetScan Predicted Conserved microRNA Targets	1.0	0.90397
hsa-miR-3686	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Anther	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.04
reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
caudal portion of VFC (area 44)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.177
GP5D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48216
Granulosa cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.417
inner SZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.829977
Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-A6EP-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pollen mother cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.251
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.047
UBC	Pathway Commons Protein-Protein Interactions	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4849-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Immature ovarian follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.43
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.5
Ovariole	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.59
physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.362609
Nephridium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.62
laminin-3 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.637
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82773
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1Z4-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
stomach	GTEx Tissue Gene Expression Profiles	1.0	2.18987
evolution	GeneRIF Biological Term Annotations	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8430-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.984948
SP in ventromedial extrastriate cortex (VP)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.01732
restricted	GeneRIF Biological Term Annotations	1.0	null
fulvestrant_homo sapiens_gpl570_gse22533	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053688
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4698-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mRNA stabilization	GO Biological Process Annotations 2025	1.0	null
upper limb region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.80503
hypospadias	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.339073
laterodorsal part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.26436
Eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.077
EGR4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.0088
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EX-A3L1-01A-11R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
reproductive process	GO Biological Process Annotations 2015	1.0	null
Flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.383
KLF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.3501
spermatic	GeneRIF Biological Term Annotations	1.0	null
translation	GeneRIF Biological Term Annotations	1.0	null
Primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.318
Translation repressor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.894
Lung adenocarcinoma_LUAD_TCGA-44-6146-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DZIP3	Pathway Commons Protein-Protein Interactions	1.0	null
Embryonic axis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.824
increase	GeneRIF Biological Term Annotations	1.0	null
Microspore	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.987
Stolon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.62
lateral subdivision of area 9	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0436
different	GeneRIF Biological Term Annotations	1.0	null
GSE236502_2_v_0_paclitaxel_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Mesonephron	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.064
Theca cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.889
chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.912045
hsa-miR-548a-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.165047
Megasporangium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.912
Outer dynein arm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.522
protein-containing complex	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
Sarcoma_SARC_TCGA-WK-A8XQ-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ciliary pocket	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.757
PMC8724844-bt-30-1-98-supple2.xlsx-GO_BP-TFAP4_TFAP4	Rummagene Transcription Factor Associations 2026	1.0	null
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
per	GeneRIF Biological Term Annotations	1.0	null
perinucleolar compartment	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.656464
reproduction	GAD High Level Gene-Disease Associations	1.0	0.318534
Kallmann syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.584
intermediate portion of DFC (area 9/46)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06525
cryptorchidism	GeneRIF Biological Term Annotations	1.0	null
nucleotide binding	GO Molecular Function Annotations 2015	1.0	null
protein binding	GO Molecular Function Annotations 2015	1.0	null
Intracellular anatomical structure	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
hsa-miR-4491	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
SP in caudal hippocampal proper	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.995
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.635013
HT-115 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.917
positive regulation of biological process	GO Biological Process Annotations 2015	1.0	null
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.437
cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.525166
china	GeneRIF Biological Term Annotations	1.0	null
translation activator activity	GO Molecular Function Annotations 2015	1.0	null
Male infertility due to globozoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.954
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16069
Visceral endoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.901
VZ in septal region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.86023
SNU1079	CCLE Cell Line Gene CNV Profiles	1.0	1.44891
Epididymis disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.042
PMC7857731-elife-63093-supp1.xlsx-DEG_MITF-X6vsEV-SkMEL28-Unnamed_1_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7051-11A-02R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VZ in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.02852
limitans nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.90302
CTCF_GM20000_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sry	GeneRIF Biological Term Annotations	1.0	null
damage	GeneRIF Biological Term Annotations	1.0	null
ATF2	Pathway Commons Protein-Protein Interactions	1.0	null
Cytoplasmic stress granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.527
hsa-miR-4733-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
formation	GeneRIF Biological Term Annotations	1.0	null
Infertility, Male	HuGE Navigator Gene-Phenotype Associations	1.0	null
Mitochondrial derivative	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.38
regulation of metabolic process	GO Biological Process Annotations 2015	1.0	null
single-organism process	GO Biological Process Annotations 2015	1.0	null
interacting	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-196b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
cellular developmental process	GO Biological Process Annotations 2015	1.0	null
Tailbud stage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.858
hsa-miR-1269b	TargetScan Predicted Conserved microRNA Targets	1.0	0.997906
functional abnormality of male internal genitalia	HPO Gene-Disease Associations	1.0	null
Testicular somatic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.454
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.836838
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052058
Seminal vesicle fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.834
Organelle	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
rostral ventral respiratory cell group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.47112
chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.594064
hsa-miR-4659a-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.568687
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.07618
RERFLCKJ	CCLE Cell Line Gene CNV Profiles	1.0	1.4666
SW 982	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39844
Specific language impairment	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.386
hsa-miR-507	TargetScan Predicted Conserved microRNA Targets	1.0	0.088999
haploid	GeneRIF Biological Term Annotations	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.829453
number	GeneRIF Biological Term Annotations	1.0	null
testicular	GeneRIF Biological Term Annotations	1.0	null
DNA methyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.579
positive regulation of translation	GO Biological Process Annotations 2025	1.0	null
MZ in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.930161
GSE169205_3_v_8_sirt5_human	RummaGEO Gene Perturbation Signatures	1.0	null
External male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.332
SG in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.24074
exhibit	GeneRIF Biological Term Annotations	1.0	null
Meiotic cohesin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.173
binding	GO Molecular Function Annotations 2015	1.0	null
IM-95M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.469
GSE214931_4_v_5_temozolomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Secondary oocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.322
Primary ciliary dyskinesia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.01
Syp1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.899
hsa-miR-3647-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.419947
496100375_FWM_dementia_no TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.24445
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.287
Euchromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.495
intracellular organelle	LOCATE Curated Protein Localization Annotations	1.0	null
polyabinding	GeneRIF Biological Term Annotations	1.0	null
proliferative	GeneRIF Biological Term Annotations	1.0	null
finding	GeneRIF Biological Term Annotations	1.0	null
ZNF320	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	208.308
Germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.692
hsa-miR-4661-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
molecular_function	GO Molecular Function Annotations 2015	1.0	null
MZ in rostral midinferior temporal cortex (area 36)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.46606
Inner dynein arm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.582
RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.7676
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
hsa-miR-488	TargetScan Predicted Conserved microRNA Targets	1.0	1.26663
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-VB-A8QN-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.054095
Plasma membrane bounded cell projection cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.446
mitochondrial chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.214366
Amniocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.389
depends	GeneRIF Biological Term Annotations	1.0	null
male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Dorsal endoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.876
ZNF669	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.52
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.743671
Messenger ribonucleoprotein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.876
chinese	GeneRIF Biological Term Annotations	1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886834
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846023
all	GeneRIF Biological Term Annotations	1.0	null
phenotypic abnormality	HPO Gene-Disease Associations	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Pheochromocytoma and Paraganglioma_PCPG_TCGA-P8-A6RX-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
infertility	GAD Gene-Disease Associations	1.0	null
hsa-miR-500a	TargetScan Predicted Conserved microRNA Targets	1.0	0.31417
Liver hepatocellular carcinoma_LIHC_TCGA-ED-A459-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
positive regulation of translation	GO Biological Process Annotations 2015	1.0	null
Seminal plasma	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.538
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.43709
grgr	GeneRIF Biological Term Annotations	1.0	null
biological_process	GO Biological Process Annotations 2015	1.0	null
NCIH1563	CCLE Cell Line Gene CNV Profiles	1.0	1.71423
hsa-miR-502-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Germ cell nucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.847
PMC7825356-8844261.f3.docx-107-TGIF2LY_TGIF2LY	Rummagene Transcription Factor Associations 2026	1.0	null
their	GeneRIF Biological Term Annotations	1.0	null
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.923381
organelle lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.191456
Varicocele	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.325
spermatozoon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.554478
Spermatozoon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.346
failure	GeneRIF Biological Term Annotations	1.0	null
nucleus	LOCATE Curated Protein Localization Annotations	1.0	null
786O	CCLE Cell Line Gene CNV Profiles	1.0	1.69824
cell differentiation	GO Biological Process Annotations 2015	1.0	null
Inhibin B complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.654
y-linked inheritance	HPO Gene-Disease Associations	1.0	null
regulation of primary metabolic process	GO Biological Process Annotations 2015	1.0	null
DYNLL1	Hub Proteins Protein-Protein Interactions	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2205
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939222
Morula	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.982
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2025	1.0	null
genesis	GeneRIF Biological Term Annotations	1.0	null
dissociation	GeneRIF Biological Term Annotations	1.0	null
Synaptonemal structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.288
motor nucleus of trigeminal nerve	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.850997
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Divisome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.114
Spermatid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.691
Mantle cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.848
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GT-01A-12R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
y chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.78649
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.561772
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Stereocilium membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.681
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5009-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
confirmation	GeneRIF Biological Term Annotations	1.0	null
ZNF449	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.7298
male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
P granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.8
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5703-01A-11R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.39435
lead	GeneRIF Biological Term Annotations	1.0	null
medial habenular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.843355
Extraembryonic tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.181
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A4AV-01A-11R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH460	CCLE Cell Line Gene CNV Profiles	1.0	1.40463
X-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.482
cell part	LOCATE Curated Protein Localization Annotations	1.0	null
Mitochondrial cloud	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.918
choroid plexus of the fourth ventricle	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.64388
epithelium	GeneRIF Biological Term Annotations	1.0	null
rate	GeneRIF Biological Term Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SC-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Semen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.953
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.613
KLF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.2267
GSE210101,GSE210114_5_v_10_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Lateral nerve cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.77
Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3352-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU1076	CCLE Cell Line Gene CNV Profiles	1.0	1.77553
Acute Myeloid Leukemia_LAML_TCGA-AB-2849-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Blastoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.641
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04041
four	GeneRIF Biological Term Annotations	1.0	null
regulation of macromolecule biosynthetic process	GO Biological Process Annotations 2015	1.0	null
hsa-miR-516b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
region	GeneRIF Biological Term Annotations	1.0	null
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2886
hsa-miR-3974	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.018
turner	GeneRIF Biological Term Annotations	1.0	null
Sertoli cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.292
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4875-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE240386,GSE242143_8_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
stages	GeneRIF Biological Term Annotations	1.0	null
Zygote	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.4
Embryoid body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.251
vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.051131
membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050534
cannot	GeneRIF Biological Term Annotations	1.0	null
promoter	GeneRIF Biological Term Annotations	1.0	null
spermatogonia	GeneRIF Biological Term Annotations	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-43-6143-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.849
Mixed gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.779
IZ in ventrolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.884346
Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A8RY-11A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
regulation of cellular biosynthetic process	GO Biological Process Annotations 2015	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3451-01A-02R-1188-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
later	GeneRIF Biological Term Annotations	1.0	null
WICH complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.726
hsa-miR-500b	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
hsa-miR-634	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Multiple Chronic Conditions	DisGeNET Gene-Disease Associations	1.0	null
PLAG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	95.3889
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Accessory sex gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.23
klinefelter's syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.485885
Cleavage furrow	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.875
germ	GeneRIF Biological Term Annotations	1.0	null
Condensed nuclear chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.178
hsa-miR-4516	TargetScan Predicted Conserved microRNA Targets	1.0	0.997906
12509443-Table2	GeneSigDB Published Gene Signatures	1.0	null
appears	GeneRIF Biological Term Annotations	1.0	null
Testicular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.117
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04267
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04267
Peritubular contractile cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.63
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.57
transmitted	GeneRIF Biological Term Annotations	1.0	null
Axonemal dynein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.877
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04627
Nuclear cap binding complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.501
Nebenkern	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.405
MT-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
IRF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3764
hsa-miR-548u	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
intact	GeneRIF Biological Term Annotations	1.0	null
regulation of macromolecule metabolic process	GO Biological Process Annotations 2015	1.0	null
Motile cilium	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.278
NKX2-4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.0856
KLF13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.4969
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.144
positive regulation of cellular biosynthetic process	GO Biological Process Annotations 2015	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8425-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
copy	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-577	TargetScan Predicted Conserved microRNA Targets	1.0	0.265648
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
hsa-miR-4775	TargetScan Predicted Conserved microRNA Targets	1.0	0.541706
Pachytene cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.453
DZIP1	Pathway Commons Protein-Protein Interactions	1.0	null
recovery	GeneRIF Biological Term Annotations	1.0	null
Testicular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.043
transcription	GeneRIF Biological Term Annotations	1.0	null
SK-N-SH	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32391
JUN	Pathway Commons Protein-Protein Interactions	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-DZ-6134-11A-01R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Partial Chromosome Y Deletion	DisGeNET Gene-Phenotype Associations	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2842-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
underlie	GeneRIF Biological Term Annotations	1.0	null
Esophagus - Gastroesophageal Junction	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21239
molecular layer of rostral subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.81527
Trophectoderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.909
BORC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.513
compatible	GeneRIF Biological Term Annotations	1.0	null
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
DYNLL1	Pathway Commons Protein-Protein Interactions	1.0	null
IZ in dorsomedial parietal cortex (area 7m)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.25728
selective	GeneRIF Biological Term Annotations	1.0	null
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.5
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04267
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.22826
SP in midcingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.53355
hsa-miR-432	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
does	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-527	TargetScan Predicted Conserved microRNA Targets	1.0	0.90397
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70431
Autosomal recessive polycystic kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.325
chilean	GeneRIF Biological Term Annotations	1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NKX2-8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6482
CAL33	CCLE Cell Line Gene CNV Profiles	1.0	2.26714
Pancreatic adenocarcinoma_PAAD_TCGA-US-A776-01A-13R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
testis	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-513a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6470-01A-11R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
3'-UTR-mediated mRNA stabilization	GO Biological Process Annotations 2023	1.0	null
affect	GeneRIF Biological Term Annotations	1.0	null
dorsal motor nucleus of the vagus (vagal nucleus)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.1846
loop	GeneRIF Biological Term Annotations	1.0	null
positive regulation of cellular protein metabolic process	GO Biological Process Annotations 2015	1.0	null
Y-shaped link	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.056
cytoplasm	GO Cellular Component Annotations 2015	1.0	null
testes	GeneRIF Biological Term Annotations	1.0	null
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
UKE-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70431
internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.24476
GSE210101,GSE210114_5_v_9_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.48418
Lung adenocarcinoma_LUAD_TCGA-55-7570-01A-11R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
azoospermia; oligospermia; infertility, male	GAD Gene-Disease Associations	1.0	null
some	GeneRIF Biological Term Annotations	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-P4-A5E8-11A-12R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Heterochromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.648
Peritubular cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.506
cetuximab_homo sapiens_gpl570_gse21483	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
hsa-miR-4475	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
sufficient	GeneRIF Biological Term Annotations	1.0	null
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.629892
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846023
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.228764
Corpus luteum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.96
Cyclin B1-CDK1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.05
sertoli cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.29996
KARPAS-299 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.515
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.516
46,XY sex reversal 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.014
Pseudohermaphroditism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.484
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
positive regulation of translation	GO Biological Process Annotations 2023	1.0	null
SP in dorsolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.00324
IZ in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.41061
Female accessory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.135
RUNX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2385
A-431 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.779
Nucleus	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
cryptorchidism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.757786
plant form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060497
hsa-miR-4645-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.670641
raphe magnus nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.18363
gametes	GeneRIF Biological Term Annotations	1.0	null
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.833395
hsa-miR-4307	TargetScan Predicted Conserved microRNA Targets	1.0	0.187098
spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.38871
hsa-miR-3065-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
ZNF682	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8752
sons	GeneRIF Biological Term Annotations	1.0	null
stable	GeneRIF Biological Term Annotations	1.0	null
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32391
DZIP1L	Pathway Commons Protein-Protein Interactions	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-8309-01A-11R-2296-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043731
PMC4162954-12864_2014_6430_MOESM3_ESM.xlsx-2102Ep-Genes_deregulated_in_2102Ep_cells_after_SOX2_knock-down_FDR-corrected_P-value_0_05_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
assays	GeneRIF Biological Term Annotations	1.0	null
Down syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
somatic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.501965
Polycystin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.146
Satellite fibril	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.03
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Germ cell cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.263
biological regulation	GO Biological Process Annotations 2015	1.0	null
intercalated nucleus of medulla	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.22961
intracellular organelle lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.191456
abnormality	GeneRIF Biological Term Annotations	1.0	null
Oligospermia	DisGeNET Gene-Disease Associations	1.0	null
positive regulation of biosynthetic process	GO Biological Process Annotations 2015	1.0	null
testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.4394
polymorphic layer of rostral subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.32757
TFAP4::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.825
germinal	GeneRIF Biological Term Annotations	1.0	null
Asthenozoospermia	DisGeNET Gene-Disease Associations	1.0	null
single-organism cellular process	GO Biological Process Annotations 2015	1.0	null
having	GeneRIF Biological Term Annotations	1.0	null
GSE240386,GSE242143_1_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Pollen wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.719
Internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.524
TF1	CCLE Cell Line Gene CNV Profiles	1.0	1.75265
KLF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	78.4559
male reproductive gland	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
NFIX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.5224
GSE102132_0_v_1_irf3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC9468722__F4	PFOCR Pathway Figure Associations 2024	1.0	null
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.506
indusium griseum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.62777
primordium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.941785
Prader-Willi syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.15
Cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
Ribonucleoprotein granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.875
liver	GTEx Tissue Gene Expression Profiles	1.0	0.96334
cause	GeneRIF Biological Term Annotations	1.0	null
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050294
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Z granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.597
Lung adenocarcinoma_LUAD_TCGA-55-1592-01A-01R-0946-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mitochondrial part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.069363
Pituitary gonadotropin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.865
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
single-multicellular organism process	GO Biological Process Annotations 2015	1.0	null
Azoospermia	HuGE Navigator Gene-Phenotype Associations	1.0	null
hsa-miR-4638-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Meiotic spindle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.272
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.833395
island	GeneRIF Biological Term Annotations	1.0	null
demonstrated	GeneRIF Biological Term Annotations	1.0	null
WM1799	CCLE Cell Line Gene CNV Profiles	1.0	1.5081
hsa-miR-1	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
deletion	GeneRIF Biological Term Annotations	1.0	null
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886834
meiotic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.394953
Cell property	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.13
south	GeneRIF Biological Term Annotations	1.0	null
cytoplasm	LOCATE Predicted Protein Localization Annotations	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.234016
Congenital Absence Of Germinal Epithelium Of Testes	DisGeNET Gene-Disease Associations	1.0	null
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939222
inner CP in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.848309
partial	GeneRIF Biological Term Annotations	1.0	null
OCI-AML3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48216
germ cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.81175
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.02
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82327
mRNA binding	GO Molecular Function Annotations 2025	1.0	null
MDA-MB-435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
copies	GeneRIF Biological Term Annotations	1.0	null
predictive	GeneRIF Biological Term Annotations	1.0	null
former	GeneRIF Biological Term Annotations	1.0	null
spermatogenic	GeneRIF Biological Term Annotations	1.0	null
Sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.102
CP in caudal subicular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.17254
Genetic Diseases, Y-Linked	HuGE Navigator Gene-Phenotype Associations	1.0	null
hsa-miR-4302	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
impairmentazoospermia	GeneRIF Biological Term Annotations	1.0	null
impairment	GeneRIF Biological Term Annotations	1.0	null
Sperm midpiece	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.57
azc	GeneRIF Biological Term Annotations	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-QA-A7B7-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
3'-UTR-mediated mRNA stabilization	GO Biological Process Annotations 2025	1.0	null
MOLM6	CCLE Cell Line Gene CNV Profiles	1.0	1.3729
abnormal male reproductive system physiology	HPO Gene-Disease Associations	1.0	null
Polysome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.752
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.838415
Seminal vesicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.511
polysensory temporal cortex (area 22p)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.98271
single-organism developmental process	GO Biological Process Annotations 2015	1.0	null
Sarcoma_SARC_TCGA-FX-A3NK-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Interstitial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.64
ZNF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.8595
frequent	GeneRIF Biological Term Annotations	1.0	null
degrees	GeneRIF Biological Term Annotations	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A20C-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
YY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.091
testis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.268
midbrain reticular formation	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.837995
intracellular part	LOCATE Curated Protein Localization Annotations	1.0	null
hsa-miR-4668-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.670641
positive regulation of macromolecule biosynthetic process	GO Biological Process Annotations 2015	1.0	null
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042811
larger	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-4726-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
hsa-miR-550b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
Autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.098
Hermaphroditism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.006
CTCFL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.2684
polymorphisms	GeneRIF Biological Term Annotations	1.0	null
damaged	GeneRIF Biological Term Annotations	1.0	null
Cellular anatomical entity	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
outer CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.04508
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
Dysgerminoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.272
intracellular membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
RNA recognition motif domain	InterPro Predicted Protein Domain Annotations	1.0	null
Y-linked spermatogenic failure 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.9
prader-willi syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.300173
much	GeneRIF Biological Term Annotations	1.0	null
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.9826
Embryonic carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.514
VZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.13244
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.600644
Peripheral Nervous System Diseases	CTD Gene-Disease Associations	1.0	2.88009
follicle-stimulating hormone complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.821
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5000-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
azoospermia	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-4780	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
mode of inheritance	HPO Gene-Disease Associations	1.0	null
Epiblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.719
male reproductive system	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
regulation of translational initiation	GO Biological Process Annotations 2015	1.0	null
men	GeneRIF Biological Term Annotations	1.0	null
MZ in retrosplenial cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.53322
whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
HINFP	JASPAR Predicted Transcription Factor Targets	1.0	null
Overnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.004
loss	GeneRIF Biological Term Annotations	1.0	null
Mesonephric duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.947
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051042
Prepupa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.598
reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.92108
somatic	GeneRIF Biological Term Annotations	1.0	null
Primary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.318
Adams apple	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.545
IRF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6763
DAZL	Pathway Commons Protein-Protein Interactions	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.11951
factors	GeneRIF Biological Term Annotations	1.0	null
functions	GeneRIF Biological Term Annotations	1.0	null
GSE139016_3_v_2_disulfiram_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Blastodisc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.079
HDMYZ	CCLE Cell Line Gene CNV Profiles	1.0	1.39563
varicose veins	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.162707
hsa-miR-4777-5p	TargetScan Predicted Conserved microRNA Targets	1.0	0.90397
Klinefelter'S Syndrome - Male With More Than Two X Chromosomes	DisGeNET Gene-Disease Associations	1.0	null
inner SZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.06457
mushroom body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.499615
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.09797
polymorphic	GeneRIF Biological Term Annotations	1.0	null
seminoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.731854
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.178
Tapetum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.669
Nuclear chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.886
skin	GTEx Tissue Gene Expression Profiles	1.0	1.14287
Spermatogonium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.742
stratum oriens of caudal CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.824688
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.742
hsa-miR-620	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.33185
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12428
Chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.087
Primary oocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.454
silent	GeneRIF Biological Term Annotations	1.0	null
hPSC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.561
frequently	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-369-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
PAT complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.537
Spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.719
cytoplasmic ribonucleoprotein granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.124296
andor	GeneRIF Biological Term Annotations	1.0	null
CTCF_pancreas_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Hydrocele	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.398
Disorder of sexual development	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.343
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
hsa-miR-889	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
germ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.552093
bpy2	GeneRIF Biological Term Annotations	1.0	null
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.358183
syndrome	GeneRIF Biological Term Annotations	1.0	null
duplications	GeneRIF Biological Term Annotations	1.0	null
X-linked adrenal hypoplasia congenita	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.058
reduction	GeneRIF Biological Term Annotations	1.0	null
XY body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.483
Liver hepatocellular carcinoma_LIHC_TCGA-FV-A2QR-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
infertility, male; sertoli cell-only syndrome	GAD Gene-Disease Associations	1.0	null
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.58
fertility	GeneRIF Biological Term Annotations	1.0	null
boll	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-543	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042266
further	GeneRIF Biological Term Annotations	1.0	null
GSE169205_0_v_7_sirt5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.11655
Seminiferous tubule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.456
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81J-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nucleoid	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.207794
studied	GeneRIF Biological Term Annotations	1.0	null
complete	GeneRIF Biological Term Annotations	1.0	null
Oligoasthenoteratozoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.5
turner syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.562946
Perinucleolar compartment	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.707
spermatogenesis	GAD Gene-Disease Associations	1.0	null
Z chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.589
Sex chromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.085
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1189
form	GeneRIF Biological Term Annotations	1.0	null
Hypospadias	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.688
regions	GeneRIF Biological Term Annotations	1.0	null
Blastocyst	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.623
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KE39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45141
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
constraints	GeneRIF Biological Term Annotations	1.0	null
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.513
Ovarian surface epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.668
laterorostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.19565
Pronephric duct	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.956
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040063
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.049
hsa-miR-206	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
azoospermia; infertility, male	GAD Gene-Disease Associations	1.0	null
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050514
lateral orbital frontal cortex (area 12/47)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.43814
han	GeneRIF Biological Term Annotations	1.0	null
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
adult	GeneRIF Biological Term Annotations	1.0	null
Cytoplasmic ribonucleoprotein granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.843
showed	GeneRIF Biological Term Annotations	1.0	null
Plant ovule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.912
daz	GeneRIF Biological Term Annotations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4769-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Supporting cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.174
Testicular vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.619
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047651
seem	GeneRIF Biological Term Annotations	1.0	null
PMC4729482-pone.0146505.s001.xlsx-Sheet1-chRCC_positively_associated_with_AR_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A3JM-01A-12R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RNA polymerase I upstream activating factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.628
SKUT1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47232
outer SZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.67357
varicocele	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.372217
hsa-miR-4659b-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.568687
nucleic acid binding	GO Molecular Function Annotations 2015	1.0	null
Ovum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.963
related	GeneRIF Biological Term Annotations	1.0	null
MYOG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.1853
CORL95	CCLE Cell Line Gene CNV Profiles	1.0	1.45017
46,XY sex reversal	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.577
QKI	Pathway Commons Protein-Protein Interactions	1.0	null
Pedal ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.534
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5106-01A-01R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
gonad	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
IZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.61669
GSE236502_1_v_3_paclitaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
dazl	GeneRIF Biological Term Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-J9-A52E-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Theca folliculi	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.175
Nucleotide-binding alpha-beta plait domain	InterPro Predicted Protein Domain Annotations	1.0	null
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.939222
male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	2.19776
LASV_FML29_24hr_24069471_GSE41300	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-3.22625
Pedal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.883
IM-95	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70015
Kidney renal clear cell carcinoma_KIRC_TCGA-B2-A4SR-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
translation regulator activity	GO Molecular Function Annotations 2015	1.0	null
rearrangementspolymorphisms	GeneRIF Biological Term Annotations	1.0	null
Buccal mass	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.824
MOR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991518
positive	GeneRIF Biological Term Annotations	1.0	null
SU-DHL-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
496100499_PCx_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.40904
laterodorsal subdivision of area 8	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10829
hsa-miR-1288	TargetScan Predicted Conserved microRNA Targets	1.0	0.181316
PMC12126244-jci-135-184115-s239.xlsx-Table_3_Suppl_Fig_16-Genes_down-regulated_in_SOX9_low_tumors_744_genes_SOX9	Rummagene Transcription Factor Associations 2026	1.0	null
hsa-miR-548q	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Gametophyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.063
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.887622
higher	GeneRIF Biological Term Annotations	1.0	null
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.868
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14188
Gynecomastia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.353
hsa-miR-3185	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
abnormality of metabolism/homeostasis	HPO Gene-Disease Associations	1.0	null
KMS34	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62209
germcell	GeneRIF Biological Term Annotations	1.0	null
ribonucleoprotein granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.116693
hsa-miR-4529-3p	TargetScan Predicted Conserved microRNA Targets	1.0	0.181316
Intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.213
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846023
HIC1_01_205	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	6.09566
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4869-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Intercellular bridge	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.298
significant	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-3907	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
corpus callosum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.08383
all	HPO Gene-Disease Associations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-8262-01A-11R-2263-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
hsa-miR-4282	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Primary ovarian insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.861
RKO-E6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
hsa-miR-548e	TargetScan Predicted Conserved microRNA Targets	1.0	0.17031
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
Gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.791
cohorts	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-557	TargetScan Predicted Conserved microRNA Targets	1.0	0.072324
decreased	GeneRIF Biological Term Annotations	1.0	null
Megagametophyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.916
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55096
sertoli cell-only syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.72092
Small Testicle	DisGeNET Gene-Phenotype Associations	1.0	null