association	dataset	threshold value	standardized value
HGC-27 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.066
epidermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056157
ZNF547	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.524
Nucleolus	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	4.0
hdac2	GeneRIF Biological Term Annotations	1.0	null
nb41a3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.729
NT5DC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94291
exerted	GeneRIF Biological Term Annotations	1.0	null
Extracellular vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.395
Leukopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.666
Thrombosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.184
ANXA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0636
molecular_function	GO Molecular Function Annotations 2015	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MP-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DorsalRootGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.886483
Abdomen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.448
Vero cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.642
nerve sheath cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.215928
Cardiomyopathy	DisGeNET Gene-Disease Associations	1.0	null
congenital hypoplastic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.134623
AP5M1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82543
Urinary bladder cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.157
Whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.038
ENTPD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72628
TNNC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.85115
regulating	GeneRIF Biological Term Annotations	1.0	null
purine ribonucleoside triphosphate binding	GO Molecular Function Annotations 2015	1.0	null
BHT101	CCLE Cell Line Gene Expression Profiles	-1.0	-1.91131
Ire1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.181
Pancreatic ductal carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.463
AK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20108
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6418
retinoblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.623446
MELHO	DepMap CRISPR Gene Dependency	1.0	2.60946
Lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.674
RFLNB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8933
ZSWIM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48172
Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7HC-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.385
Bladder Urothelial Carcinoma_BLCA_TCGA-XF-A8HE-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07673
Perturb_6300_KD_CGA_SRP355115	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
Head and neck cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.239
JUND	ENCODE Transcription Factor Targets	1.0	null
MDA-MB-468 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.709
Intestinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.427
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4558
MPF complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.516
non-Hodgkin lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.058
Duodenum Mucosa	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-0.955301
GTPase activator complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.548
Monocytic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.178
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A62S-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dorsolateral prefrontal cortex_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.17649
U118MG	CCLE Cell Line Gene Expression Profiles	-1.0	-1.68403
plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05273
ZR-75 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.577
Clathrin coat of coated pit	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.69
ERLEC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63428
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A11D-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE201309_1_v_0_matrine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
H2AFZ_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAX_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Intestinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.505
NUGC3	CCLE Cell Line Gene Expression Profiles	1.0	2.07475
NEUROD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4669
RNF41	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.7077
ZNF808	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06233
GOLIM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5978
RCH-ACV	COSMIC Cell Line Gene Mutation Profiles	1.0	null
smad protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.481661
Kupffer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.427
CIDEC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46264
HOS	CCLE Cell Line Gene Expression Profiles	-1.0	-1.60201
Uterine cervix	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.055
GARP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.135
LPAR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17642
SHISA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53993
PMC12719768-mmc1.pdf-4-ETV4_ETV4	Rummagene Transcription Factor Associations 2026	1.0	null
OPM2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45939
U-266 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.564
Type I pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.6
Gastroesophageal junction	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.87
Pleural cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.337
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053658
Brain cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.941
horsetail-astral microtubule array	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.719
HCC2814	CCLE Cell Line Gene CNV Profiles	1.0	1.42517
Oropharynx cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.043
Lung adenocarcinoma_LUAD_TCGA-38-4625-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SLC7A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33131
Endoplasmic reticulum palmitoyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.235
DNA repair complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.472
Acute myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.653
RNA helicase, DEAD-box type, Q motif	InterPro Predicted Protein Domain Annotations	1.0	null
Peripheral blood mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.106
Catalase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.507
CORL23	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41493
Bone cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.549
dorsolateral prefrontal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.77187
Breast	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
hsa-miR-567	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.409
WI-38 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.998
Kidney cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.416
interleukin-27 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.45
CiliaryGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.13438
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EK-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7364-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Peritoneal macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.544
PROKR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72705
NCI-H1436	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RASGEF1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.98537
USP34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90361
Glioblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.971
Male reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.404
Multiple myeloma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.969
Intestinal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.071
CAPN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30982
RHOD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78096
CSGALNACT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25121
NFYB	ENCODE Transcription Factor Targets	1.0	null
SUMO activating enzyme complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.628
HCN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12832
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JD-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044726
nucleus	GO Cellular Component Annotations 2015	1.0	null
MAGT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67604
H3K27ac_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DCUN1D2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.76639
HL-60 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.581
protein-containing complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.949
dorsolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.29971
GSE182921_0_v_1_slit2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.422
Mesothelioma_MESO_TCGA-LK-A4NW-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hair color	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.630103
adhesion	GeneRIF Biological Term Annotations	1.0	null
Malignant Ascites	DisGeNET Gene-Disease Associations	1.0	null
J-774A.1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.31
496100525_TCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.05351
TSPAN17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60282
Endomembrane system	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.471
Breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.877
Germ cell and embryonal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.124
SALE	CCLE Cell Line Gene Expression Profiles	-1.0	-2.42992
Colon descendens	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.695
testis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.903275
CAPAN-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.187
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.305722
NCI-H524	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.745
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8648
cellular_component	GO Cellular Component Annotations 2015	1.0	null
Biliary tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.502
Hep-G2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.169
dorsolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.38075
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.220378
ATP5PO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76476
colo677	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.512
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SQ-A6I4-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CASP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86666
Bone marrow-derived dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.102
Colorectal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.914
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.402
SHROOM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14531
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.664
Teratocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.103
Crohn's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.474
BAK complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.471
FNIP-folliculin RagC/D GAP	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.559
PREB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51965
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H4-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Colorectal adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.2
ht2clonea5e	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.511
Erysipelas	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.069
HCC1569	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.03003
HCT-8 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.905
THP-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.704
ETV1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34983
Adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.947
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3X1-01A-12R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Liver Cirrhosis	DisGeNET Gene-Disease Associations	1.0	null
phospholipid-translocating ATPase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.593
M/G1 phase-specific MADS box-forkhead transcription factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.026
POLH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22551
RNF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15428
Chronic lymphocytic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.586
male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.826523
Internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
DMS79	CCLE Cell Line Gene Expression Profiles	-1.0	-1.51474
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.397035
RT-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.836
FAM89B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7983
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.02
metabolic process	GO Biological Process Annotations 2015	1.0	null
COLO679	DepMap CRISPR Gene Dependency	1.0	2.16731
GID4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47758
PHF8	ENCODE Transcription Factor Targets	1.0	null
COPS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00017
ELF1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Ocular cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.355
TRIM52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.00067
CPD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6794
MAX_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CD79B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90974
Mood disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.052
LN-443 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.996
RPMI-7951 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.735
HCT-15	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Adult Lymphoma	DisGeNET Gene-Disease Associations	1.0	null
MLKL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83276
JHOS4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76149
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059845
FABP7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.90457
Iaxssbr	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.631
Rhabdomyosarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.847
Liver cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.094
ZFP36	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72907
LRIG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81322
Diphtheria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.534
pigment granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.177439
Disease Progression	HuGE Navigator Gene-Phenotype Associations	1.0	null
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.281
KE97	CCLE Cell Line Gene Expression Profiles	1.0	1.45137
islands	GeneRIF Biological Term Annotations	1.0	null
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-1.38034
organic cyclic compound binding	GO Molecular Function Annotations 2015	1.0	null
TTT complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.768
MOLT-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.262
NCI-H23 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.622
pineal_night	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.942751
GABARAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61522
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PCSK9-AnxA2 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.55
Urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
lines	GeneRIF Biological Term Annotations	1.0	null
nucleolus	GO Cellular Component Annotations 2023	1.0	null
CT-26 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.557
Fibrosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.412
CREB1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.054113
MHC class I protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.773
striatum_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.26725
PHLDB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88702
PXDN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25653
Leukemia	DisGeNET Gene-Disease Associations	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-8092-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SPDEF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5699
Osteosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.041
Colonic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.245
Hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.986
parietal neocortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.27969
SUM44PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.80204
APEX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46298
Osteoporosis	DisGeNET Gene-Disease Associations	1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
JJN-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GCHFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35845
dorsolateral prefrontal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.836865
ventrolateral prefrontal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01467
Uterine Carcinosarcoma_UCS_TCGA-N5-A4RT-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Perturb_14353_KD_TUT4_SRP120600	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	1.76089
BCAT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39934
OVOL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26763
nerve	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071844
dorsolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.09852
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GTF2IRD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19887
Embryonic fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.983
MORCPR	CCLE Cell Line Gene Expression Profiles	-1.0	-1.58505
TECPR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20374
MAZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Peritoneal cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.744
medulloblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.609735
Thymic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.051
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-genes_with_only_SALL4_peaks-Protein-coding_genes_that_show_only_CUT_RUN_peaks_with_2_SALL4_antibodies_and_no_other_antibodies_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
cervix, uterine	HPA Tissue Protein Expression Profiles	1.0	0.906018
b78h1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.481
Myc-CaP cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.867
ALG12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87004
BLOC1S3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74497
Apoptotic body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.75
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55115
KDM2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67365
Myocarditis	DisGeNET Gene-Disease Associations	1.0	null
Allergic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
Peripheral nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.873
Cytotoxic T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.724
Erectile dysfunction and prostate cancer treatment	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.552288
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979728
Primary cutaneous T-cell non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.262
rna binding	GO Molecular Function Annotations 2015	1.0	null
Muscle cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.362
ALDH3A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87913
Left colon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.275
GSE85880,GSE85881_0_v_1_tretinoin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
J558L cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.552
Cellular bud neck	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.614
UMRC7	DepMap CRISPR Gene Dependency	1.0	5.24198
integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044819
ZNF317	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5879
Lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.28
Mlg	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.666
BLM cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.741
Helicase superfamily 1/2, ATP-binding domain	InterPro Predicted Protein Domain Annotations	1.0	null
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075018
GSE48812_8_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
Stromal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.042
ER membrane insertion complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.101
Cancer Pain	DisGeNET Gene-Phenotype Associations	1.0	null
C6 glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.322
SW1573	CCLE Cell Line Gene CNV Profiles	1.0	1.97078
BNIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07189
Autolysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.259
Mesentery	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.512
ribonucleoside-diphosphate reductase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.039
MAX_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A6WN-01A-12R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hep2c	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.693
ML-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.041
SPACA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.758
MTHFD1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69258
EZH2	ENCODE Transcription Factor Targets	1.0	null
PGAP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34542
PCDHB6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17642
CDC42SE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61871
HBL-100 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.555
Integrin alphav-beta6 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.841
PCBP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19986
various	GeneRIF Biological Term Annotations	1.0	null
Perianth	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.592
FBXW11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68006
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932497
Mucus layer	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.883
Prostate gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.214
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5023
KNS81	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
GBX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53496
NCIH1792	CCLE Cell Line Gene CNV Profiles	1.0	1.74643
PMC11443809-12967_2024_5663_MOESM3_ESM.pdf-32-ATF2_ATF2	Rummagene Transcription Factor Associations 2026	1.0	null
nucleoside binding	GO Molecular Function Annotations 2015	1.0	null
Nso	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.511
male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0119
Acute Myeloid Leukemia_LAML_TCGA-AB-2939-03A-01T-0740-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ovary	GTEx Tissue Gene Expression Profiles	1.0	0.879515
Rectum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Corn silk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.051
SRP14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21263
TNRC6C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42013
Hepatoma HLE cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.966
Head and Neck squamous cell carcinoma_HNSC_TCGA-RS-A6TO-01A-32R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE202434,GSE202438_4_v_5_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
RTCB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94591
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.86583
Mouth disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.698
Pleural fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.612
GABPA_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.319
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.8203
Esophageal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.137
H2AZ2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70368
HLF	CCLE Cell Line Gene Expression Profiles	1.0	1.40225
Autoimmune disease of gastrointestinal tract	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.647
Colorectal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.755
KLF13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10532
WPMY-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.525
Malaria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.273
BRINP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34928
B-16 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.858
primary visual cortex (striate cortex, area V1/17)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.42776
vx2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.761
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.18928
intracellular part	LOCATE Curated Protein Localization Annotations	1.0	null
TPM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71709
Gastritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.017
thioredoxin-disulfide reductase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.278
BARHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8482
Female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Fibrosarcoma	DisGeNET Gene-Disease Associations	1.0	null
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2467
GDF15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.29917
Daltons lymphoma ascites	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.843
Esophageal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.287
Phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.391
Colo-205 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.012
dorsolateral prefrontal cortex_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.87262
MDAMB453	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.022
Intestinal wall	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.909
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889163
Pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.558
TNNC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52374
Rectum adenocarcinoma_READ_TCGA-EI-6513-01A-21R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
chorioallantois	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.286381
ELF1	ENCODE Transcription Factor Targets	1.0	null
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.988
cytoplasm	LOCATE Predicted Protein Localization Annotations	1.0	null
non-small cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.092
melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061223
ANKRD10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52311
small intestine	HPA Tissue Protein Expression Profiles	1.0	0.906018
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214017
Prostate carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.658
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.738854
LACC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78201
Capillary leak syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.148
Bone cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.096
Lymphoblastoid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.753
PROX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1103
gallbladder cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.210925
Radiation Damage	DisGeNET Gene-Disease Associations	1.0	null
heterocyclic compound binding	GO Molecular Function Annotations 2015	1.0	null
RAB29	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51244
RPS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49446
Fibrosarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.993
primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.70663
Hypocotyl	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.902
COPS7B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49322
IGR1	CCLE Cell Line Gene CNV Profiles	1.0	1.67038
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.397035
P31FUJ	CCLE Cell Line Gene Expression Profiles	1.0	1.47439
496100660_FWM_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.22805
TEAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79216
Gastric epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.455
sw837	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.172
posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.487
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21662
Type 1 diabetes mellitus_T lymphocyte_GSE10586	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.50801
Bronchogenic carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.705
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.749579
PNPLA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9134
ACBD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73878
BT-549 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.333
CCRF-CEM cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.168
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A3CG-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE89729_0_v_1_ppard_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Cholelithiasis	DisGeNET Gene-Disease Associations	1.0	null
HEK-293 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.695
RNA binding	GO Molecular Function Annotations 2023	1.0	null
Plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.414
Calpain complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.532
GSE48812_7_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
Multiple sclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.256
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.79743
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24272
Bile duct cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.567
SETX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53163
Calu-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.54
PRORP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84699
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02181
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	GO Molecular Function Annotations 2015	1.0	null
cerebellar cortex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.908709
Autoimmune disease of skin and connective tissue	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.29
INTS8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15183
whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052742
Atrophic gastritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.558
ABITRAM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36638
BAG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0622
CALML4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66297
Duodenal ulcer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.534
ZFAND2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88926
Gamma delta T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.498
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.79461
SQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83686
Medulloblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.063
SNU308	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6288
CHEK1_knockdown_142_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.20946
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.6402
ZR-75-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.957
Tetanus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.315
MINK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61536
Integral component of endoplasmic reticulum membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.224
KLHL9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33318
2-iminoacetate synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.602
posteroventral (inferior) parietal cortex_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.13169
breast benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.368518
PEMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72622
HCA-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.623
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YI-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
REPIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09478
GSE218727_0_v_3_zkscan3_human	RummaGEO Gene Perturbation Signatures	1.0	null
MDA-MB-453 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.209
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.257005
GSE140997_4_v_8_nsun6_human	RummaGEO Gene Perturbation Signatures	1.0	null
MOSPD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08974
nucleotide binding	GO Molecular Function Annotations 2015	1.0	null
ESRRG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38277
E2F7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3363
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GS-01A-12R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.244545
lm2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.086
HEK-293T cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.812
ABC1	CCLE Cell Line Gene Expression Profiles	1.0	2.32864
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
methionine-importing complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.826
Laryngeal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.33
beta-catenin destruction complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.998
Microvessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.796
KB-3-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.547
AFF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46554
LAMA-84 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.586
SLCO4A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9602
GSE239688_4_v_0_canagliflozin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GOSR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0652
ASCL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49338
Hepatobiliary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.407
BT474	CCLE Cell Line Gene CNV Profiles	1.0	2.02108
ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.263368
hydrolase activity, acting on acid anhydrides	GO Molecular Function Annotations 2015	1.0	null
CARBOPLATIN	DGIdb Drug Targets 2026	1.0	0.6015
RBBP5_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GPR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64885
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2147
non-small cell lung adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.009
PMC11629504-12864_2024_11077_MOESM1_ESM.pdf-7-ZNF462_ZNF462	Rummagene Transcription Factor Associations 2026	1.0	null
hypomethylation	GeneRIF Biological Term Annotations	1.0	null
AtrioventricularNode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.47098
MYBPC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83288
Sarcoma_SARC_TCGA-DX-AB2Z-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HLA-E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57875
MHC class I peptide loading complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.19
CHD1	ENCODE Transcription Factor Targets	1.0	null
nasopharynx	HPA Tissue Protein Expression Profiles	1.0	0.906018
MTRFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53975
MB-49 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.89
SNU46	DepMap CRISPR Gene Dependency	1.0	2.10939
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.756604
SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9765
Glioblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.008
H3K4me3_K562_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
Alcoholic Intoxication, Chronic	DisGeNET Gene-Disease Associations	1.0	null
GLYR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46262
MBOAT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36822
C2CD4C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.44748
cii3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.747
MAX	ENCODE Transcription Factor Targets	1.0	null
Male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.455
Pharyngeal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.314
Lung adenocarcinoma_LUAD_TCGA-44-7661-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dermatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.272
METRNL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11368
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.345188
bone marrow disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.068158
Hepatoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.312
CEMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6056
SK23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26146
Lymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.257
IGDCC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41634
Female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Cytoplasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.835
Bacterial outer membrane vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.869
HCC70	DepMap CRISPR Gene Dependency	1.0	2.5038
CREB1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
496100363_TCx_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.48613
PIKFYVE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18713
Bone inflammation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.628
cervical carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.103573
USP53	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31585
GSE202434,GSE202438_2_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
sw1463	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.741
t-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087028
SMIM7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.78483
SPG7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.49518
PDZD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19298
CHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43074
TP63-23658742-EP156T-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Gastric adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.148
HSF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25904
cell part	GO Cellular Component Annotations 2015	1.0	null
SKBR3	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.634417
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7440-01A-11R-2132-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Neutropenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.436
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.240276
Alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.132
PAXX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36064
CHLA57	DepMap CRISPR Gene Dependency	1.0	3.66331
S-layer	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.992
RCOR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84112
Submucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.412
Pericarp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.788
Perturb_8707_KD_SIRT1_SRP267968	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-13.4349
LS-180 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.89
Peripheral nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.837
MKN-45 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.63
Lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.687
Kbalb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.89
Endoplasmic reticulum chaperone complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.255
T cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.997
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889163
Adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.903
L-1210 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.907
PEPD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86401
A-549 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.011
NAGA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.98583
Rad51C-XRCC3 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.657
female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.071813
Cloned cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.668
PHF13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97412
GSE147876,GSE147877_4_v_1_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
Cervical cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.048
Malignant astrocytoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.331
Embryonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.087
PRKDC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54676
PANC-03-27	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CEL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09549
496100373_PCx_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.04662
COR-L311	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
GSE202434,GSE202438_7_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ATP5PD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08071
eye cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.606514
TMEM14B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77881
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.861
Extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.146
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053328
SEBOX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42249
Extracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.395
HCC1937	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.33559
Rectum adenocarcinoma_READ_TCGA-AG-4021-01A-01R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
THY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06086
anion binding	GO Molecular Function Annotations 2015	1.0	null
Bile duct carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.513
PAQR6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41274
Prostate gland cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.858
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7815
Gastric adenosquamous carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.194
Needle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.92
SLC4A1AP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99603
PC-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.618
LAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90139
cerebellar cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.79253
Childhood Leukemia	DisGeNET Gene-Disease Associations	1.0	null
Perturb_8061_KO_ZCCHC4_SRP350212	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	1.83259
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GE-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
gs109v63	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.341
Interferon regulatory factor 7 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.647
TAT protein transport complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.555
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902864
OE-33 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.779
KYSE-30 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.722
KIAA2013	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22077
LYSET	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16806
PACSIN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76371
Pancreatic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.008
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83387
H3K4me2_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Chronic myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.323
hydrolase activity	GO Molecular Function Annotations 2015	1.0	null
Rectum adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.281
Rett Syndrome	DisGeNET Gene-Disease Associations	1.0	null
SK-BR-3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.666
Gut cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.893
wehi164	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.99
MPC-11 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.482
Pancreatic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.889
primary auditory cortex (core)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.832265
GSE116580_0_v_1_smug1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Nuclear dicing body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.955
AsPC-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.546
Influenza	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.469
Column	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.18
VPS25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90708
NCI-H835	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-64-5775-01A-01R-1628-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CCDC22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28801
DISP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28511
POLR2M	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90446
GSE235701,GSE261434_2_v_3_enasidenib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE48812_11_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
MSTO-211H cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.834
Ovary adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.11
5637	COSMIC Cell Line Gene Mutation Profiles	1.0	null
2102Ep cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.535
Cecum cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.818
Bile duct adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.509
MYL12B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17776
flower	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066233
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83387
Bacterial extracellular vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.322
Cervical squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.003
ECV-304 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.636
MAX_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
variety	GeneRIF Biological Term Annotations	1.0	null
GSE202434,GSE202438_3_v_11_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
SFMBT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.6442
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847528
RPP25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13955
TKFC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45916
Colon carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.457
Bile duct disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.505
Immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.435
PRKAR1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3285
Cervical Cancer	DisGeNET Gene-Disease Associations	1.0	null
KG1C	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44523
SLC7A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30346
Vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.696
Sarcoma_SARC_TCGA-DX-A6Z0-01A-13R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lewis lung carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.037
interleukin-35 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.385
Heavy chain immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.0
AGPAT5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80033
B-lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.249
MHC class II protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.804
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.393162
COX7A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40733
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1818
NKTR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3035
Bone marrow	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.248
striatum_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.955089
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.245685
hepatocellular	GeneRIF Biological Term Annotations	1.0	null
NKX2-8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.93177
HIV Infections	HuGE Navigator Gene-Phenotype Associations	1.0	null
HL-7702 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.666
Liver cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.454
FBXO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20345
SNB19	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62468
MYC	ENCODE Transcription Factor Targets	1.0	null
HT29	CCLE Cell Line Gene Expression Profiles	-1.0	-2.21508
Respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.778
Leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.374
HNRNPU	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07198
NMuMg cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.716
Coated membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.665
Integumentary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.092
Sensory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.355
confers	GeneRIF Biological Term Annotations	1.0	null
NPM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.88296
Dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.692
Gastric epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.028
C14orf132	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60747
IGROV-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.658
eGFP-JUNB_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H-508	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.788
organelle	LOCATE Curated Protein Localization Annotations	1.0	null
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Perturb_15413_KD_KDM3B_SRP187702	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	2.06665
uterine cervix	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080799
ATF1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.999
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51N-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CML-T1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Autosomal dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.319
Growth factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.997
GSE80098,GSE80366_0_v_4_progesterone_human	RummaGEO Drug Perturbation Signatures	1.0	null
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
SPOTS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.252
CRYZ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20985
IEC-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.158
NCCRP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.95105
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063288
GALNT12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97652
HUVEC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.902
CLEC14A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26651
Urinary tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.448
Kidney cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.533
GSE264010_0_v_1_parp1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Cervix carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.402
Oral squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.637
MC-38 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.601
POLR2A_HGPS cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
143B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.18445
J-774 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.46
FLT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12507
cSARS Bat SRBD_36Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.64912
LC4-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MYC_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.967
NPC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.31157
Bladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.143
Autoimmune disease of central nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.257
bacterial vaginosis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.455224
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.65806
Liver hepatocellular carcinoma_LIHC_TCGA-G3-A5SJ-01A-11R-A27V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
aplastic anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.085578
ARH-77 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.635
RPL36AL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18353
QSOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32994
NCI-N87 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.689
ECE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.62606
KYSE410	CCLE Cell Line Gene Expression Profiles	1.0	1.40873
HCC1806	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.45515
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902864
Carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.926
Colonic benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.839
GSE240386,GSE242143_1_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
BNL CL.2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.883
primary somatosensory cortex (area S1, areas 3,1,2)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.06228
496100484_FWM_no dementia_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.08479
Uterine cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.866
yac1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.695
Lymphoblastic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.806
Periderm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.727
Hybridoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.061
G cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.941
Cervical carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.601
Duodenal Ulcer	DisGeNET Gene-Disease Associations	1.0	null
Gastrointestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.235
TAOK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94613
IGFBPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6322
Esophageal squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.829
Lung disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.698
AJM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83821
UBC	Pathway Commons Protein-Protein Interactions	1.0	null
NEFH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44261
POLR2A_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
S100A10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37387
SLC1A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3349
LRRC61	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9286
HAS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52291
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059063
Thymoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.591
H3K27me3_Brain Substantia Nigra	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Uroepithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.719
e2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.108
Thymus gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.579
Glioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.529
ZNF655	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68124
T-98G cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.126
DYNC1H1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67025
cellular_component	LOCATE Curated Protein Localization Annotations	1.0	null
Rectum adenocarcinoma_READ_TCGA-AH-6897-01A-11R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE202434,GSE202438_15_v_11_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
FAM120B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85166
Congenital Contractural Arachnodactyly	DisGeNET Gene-Disease Associations	1.0	null
WDR89	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19429
F2R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89496
Liver disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.395
HEATR5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19151
Colonic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.285
TMSB4X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83614
ZNF124	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75582
Colorectal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.507
TM7SF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76846
CHUK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.93528
High endothelial venule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.047
Malignant exocrine pancreas neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.217
skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.045301
HDQP1	CCLE Cell Line Gene CNV Profiles	1.0	1.6671
Intestinal benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.031
DCTD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89637
Lytic vacuole membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.475
pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.239101
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.122
22RV1	CCLE Cell Line Gene Expression Profiles	1.0	1.90628
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QT-A5XP-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical Squamous Cell Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
IgG immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.539
Lung squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.233
IKBKE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47456
Hepatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.419
GSE202434,GSE202438_4_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Nascent polypeptide-associated complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.298
Diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.619
RAJI cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.315
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.185612
STX10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01859
Mat-Ly-Lu cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.826
Supportive connective tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.503
gastric	GeneRIF Biological Term Annotations	1.0	null
Immunological synapse	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.443
Severe Depression	DisGeNET Gene-Disease Associations	1.0	null
Colon sigmoideum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.679
l5178yr	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.766
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890909
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
hippocampus (hippocampal formation)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.46851
Depressed Mood	DisGeNET Gene-Phenotype Associations	1.0	null
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.046696
SNU5	CCLE Cell Line Gene CNV Profiles	1.0	1.38531
GSE145639_7_v_6_adar_human	RummaGEO Gene Perturbation Signatures	1.0	null
purine ribonucleotide binding	GO Molecular Function Annotations 2015	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-66-2790-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
QPRT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24094
Cervical squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.181
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.097
CYB561A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4235
CNN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90845
KHNYN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66276
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.284253
Dyspnea	DisGeNET Gene-Phenotype Associations	1.0	null
KG-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.788
Vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.393
Lymphatic endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.166
CYB5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66717
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.576
Th1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.297
Mucositis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.615
Renal cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.363
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Hematopoietic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.374
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10905
melanocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060389
Extracellular region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.791
KCTD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70334
promotes	GeneRIF Biological Term Annotations	1.0	null
TSA cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.398
Mitochondrial membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.068
496100648_PCx_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.21778
TrigeminalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.886483
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.051
Sleep Disturbances	DisGeNET Gene-Phenotype Associations	1.0	null
A-2780 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.217
Hepatitis C	DisGeNET Gene-Disease Associations	1.0	null
TP63-23658742-EP156T-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.873594
PBMC cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.515
Colon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.048
Burkitt lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.358
ovary	HPA Tissue Protein Expression Profiles	-1.0	-1.15659
AGL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95729
Colonic neoplasm cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.896
Right colon	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.12
BL4625 (RBMX2)	NURSA Protein Complexes	1.0	null
HEL9217	DepMap CRISPR Gene Dependency	1.0	6.0456
ZNF652	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5597
UBE3C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96452
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.691
Adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.916
Plasmacytoid dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.18
Adenoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.737
Extracellular space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.641
c2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.848
CH157MN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50597
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.006
MRPL20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8438
non-small cell lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.705
Lung squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.115
Prostate adenocarcinoma_PRAD_TCGA-YL-A8S8-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pcg protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.226686
male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
A20 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.894
bone marrow	HPA Tissue Protein Expression Profiles	1.0	0.906018
Male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Helicase, C-terminal	InterPro Predicted Protein Domain Annotations	1.0	null
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890909
UACC-893	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GABPA_HeLa-S3_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
U-87MG cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.919
Colonic mucosa cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.937
posteroventral (inferior) parietal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.16799
SLC25A46	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.83538
primary auditory cortex (core)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.870368
PMC4595011-pgen.1005555.s001.xlsx-BPTF_UP-regulated-Gene_name_BPTF	Rummagene Transcription Factor Associations 2026	1.0	null
glutamate-cysteine ligase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.605
striatum_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.91701
Cardiovascular organ benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.631
GSE202933_1_v_0_ugt2b28_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Lymphangioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.815
ZNF268	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97707
Rectal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.151
ETS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6868
P-loop containing nucleoside triphosphate hydrolase	InterPro Predicted Protein Domain Annotations	1.0	null
Myelodysplastic syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.167
TKT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54736
GSE145639_1_v_4_adar_human	RummaGEO Gene Perturbation Signatures	1.0	null
fak	GeneRIF Biological Term Annotations	1.0	null
Breast cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.487
ZNF76	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8708
YY1	ENCODE Transcription Factor Targets	1.0	null
T-lymphocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.515
Secondary Malignant Neoplasm Of Liver	DisGeNET Gene-Disease Associations	1.0	null
Cbf1-Met4-Met28 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.542
cervical adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.14158
COV318	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50862
Skin melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.671
Gastric cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.095
GSE193900,GSE193905_1_v_0_pura_human	RummaGEO Gene Perturbation Signatures	-1.0	null
MRC-5 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.446
TMEM47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14844
Thrombocytopenia	DisGeNET Gene-Phenotype Associations	1.0	null
Caveola	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.296
CITED4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57055
inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.961504
p3x63ag8.653	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.614
cytoskeletal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047024
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052354
HCT-15 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.913
Skin fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.778
PHF8_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAST2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.174
nuclear part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041631
CMK115	CCLE Cell Line Gene CNV Profiles	-1.0	-2.34992
WTX_OE_GDS4802_34_human_HEK293	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
EFCAB14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.27801
ADPRH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63399
Prostate adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.842
dyskeratosis congenita	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.522273
Breast adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.578
FBXO38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57922
PSMA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60098
Myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.753
Rix1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.43
SNU182	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
Periodontitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.174
T-lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.311
NAMALWA cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.647
Skin carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.751
central nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.248203
CCNJL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52566
dorsolateral prefrontal cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.934989
Uveal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.065
Oxyntic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.056
HRT-18 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.184
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25496
Skeletal muscle cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.063
interleukin-15 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.333
SLAC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.584
Intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.869
Endometriosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.455
Cell type benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.897
Melanoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.402
HeLa-229 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.532
GDPD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63619
COCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
MFSD13A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10154
HNRNPLL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21709
Cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.111
cerebellar cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.59229
TACC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42344
NCIH2073	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5909
PRPF4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29125
primary visual cortex (striate cortex, area V1/17)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.901439
HCC1500	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	2.40402
intestinal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.178039
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Hazardous Drinking	DisGeNET Gene-Phenotype Associations	1.0	null
Hippocampus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
GAL3ST4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.08425
T-47D cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.553
MRE11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.95178
TMEM59L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54809
NCI-H322 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.756
Glutaminase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.837
Integrin alpha5-beta1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.228
Seed	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.899
mediodorsal nucleus of thalamus_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.87166
Psoriasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.132
GSE226770_3_v_6_atrx_human	RummaGEO Gene Perturbation Signatures	1.0	null
nucleus	LOCATE Curated Protein Localization Annotations	1.0	null
Autonomic nervous system neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.884
uterine	GeneRIF Biological Term Annotations	1.0	null
TMEM106B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.7075
Pancreatic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.205
Liver sinusoidal endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.851
FOXD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.35
TRMT10A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72682
U266B1	CCLE Cell Line Gene Expression Profiles	1.0	1.54909
Acquired metabolic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.514
NCM-460 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.87
Liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.649
GSE148657_3_v_1_cd44_human	RummaGEO Gene Perturbation Signatures	1.0	null
Naive T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.998
malignant peripheral nerve sheath cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.218613
Rectal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.699
U-373MG cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.869
LRRC45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71063
H3K4me3_K562_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
T-lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.756
retinoblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.614974
ZIC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86119
membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
Large cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.305
ZSCAN21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2988
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39342
Bronchial disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.187
Oral cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.878
protein-cysteine S-palmitoyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.235
ZNF518A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.01442
JURKAT E-6.1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.724
ZNF175	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0481
IRF1_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
purine nucleotide binding	GO Molecular Function Annotations 2015	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847528
Endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
NDUFS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27036
GNG11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45212
LUDLU1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46794
Chronic myeloid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.327
Bladder Urothelial Carcinoma_BLCA_TCGA-ZF-AA4W-01A-12R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.102293
GNPTAB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.51666
AP-2 adaptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.691
EDA2R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54459
mRNA binding	GO Molecular Function Annotations 2025	1.0	null
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.262
smooth muscle	HPA Tissue Protein Expression Profiles	-1.0	-2.23547
syndecan-syntenin-ALIX complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.706
ZNF444	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16484
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69745
Gas vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.233
PAX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1181
RO60	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66146
TNKS1BP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67954
H2804	COSMIC Cell Line Gene Mutation Profiles	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.85021
MICALL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2718
intracellular membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
Type 2 diabetes mellitus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.22
GSE240386,GSE242143_8_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
TMEM191C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71508
Acute Myeloid Leukemia_LAML_TCGA-AB-2895-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ROM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47017
MEST	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44312
H3K27me3_Stomach Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Nasopharynx	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.091
Cervical cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.048
HEC6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67334
Ovarian carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.822
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8986
GANAB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22685
Cell wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.749
AIF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9415
ZBED1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7753
ABHD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39326
Lung adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.395
DUSP23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41647
interleukin-23 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.704
VPS37D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95311
Tumor Angiogenesis	DisGeNET Gene-Phenotype Associations	1.0	null
NAPB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03538
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.278
COLO824	DepMap CRISPR Gene Dependency	1.0	2.06067
SPRY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.92966
Colon cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.499
Autoimmune disease of musculoskeletal system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.603
SMARCB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65296
Blood coagulation disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.336
Renal cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.052
MAX_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A8YR-01A-12R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N5-A59F-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MRAS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34314
RD	DepMap CRISPR Gene Dependency	1.0	2.2137
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.79982
GBA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48598
proliferation	GeneRIF Biological Term Annotations	1.0	null
DLD-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.252
Depression	DisGeNET Gene-Disease Associations	1.0	null
FADS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09092
PHETA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89823
RABL2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25272
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.668843
Male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
l5178ys	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.863
OVCAR-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.499
NALM-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.917
RBBP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91647
ATXN7L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36515
SNU869	CCLE Cell Line Gene Expression Profiles	-1.0	-1.83504
CYTH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25375
Cell envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.034
NCIH2052	CCLE Cell Line Gene CNV Profiles	1.0	2.36415
PMC4595011-pgen.1005555.s001.xlsx-MITF_UP-regulated-Gene_name_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
TSR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8845
GSE74251_2_v_1_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC11383357-jciinsight-9-176383-s089.pdf-58-NFE2_NFE2	Rummagene Transcription Factor Associations 2026	1.0	null
COQ5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51814
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.27382
RNF141	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27533
FOXO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18441
NCI-H3122	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
SKMM2	CCLE Cell Line Gene Expression Profiles	1.0	3.40813
Colorectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.111
ZFP82	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71395
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
ALEXANDERCELLS	CCLE Cell Line Gene CNV Profiles	1.0	1.37839
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.377
Pharyngeal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.311
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
SUP-T1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62788
Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Intestinal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.889
jvm13	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.606
YWHAE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79824
HCFC1	ENCODE Transcription Factor Targets	1.0	null
Endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.671
Merkel Cell Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Prostate cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.08
GEMCITABINE	DGIdb Drug Targets 2026	1.0	0.653481
TLE3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06062
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041463
Ghost	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.14
CHD2	ENCODE Transcription Factor Targets	1.0	null
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04135
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.0022
Retinal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.264
NINL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68891
LDAH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07479
Breast adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.137
Ovarian disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.394
CD33+_Myeloid	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.12322
inferolateral temporal cortex (area TEv, area 20)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.09587
brain	GTEx Tissue Gene Expression Profiles	1.0	0.95358
DSG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91122
RNASEH2C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37473
PTPN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64978
PDGFB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88412
Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WX-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.947413
promoter	GeneRIF Biological Term Annotations	1.0	null
NK-92 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.016
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
m9	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.914
YIPF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2497
hsa-miR-3116	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
amygdaloid complex_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.935988
Gastric adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.862
DDX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8463
A172	CCLE Cell Line Gene CNV Profiles	1.0	2.03328
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A641-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
721_B_lymphoblasts	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.69589
Hepatoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.794
MAPK1_knockdown_131_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.34158
Diarrhea	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.823
Lung squamous cell carcinoma_LUSC_TCGA-O2-A52W-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Thymus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.726
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Skin cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.022
Multiple myeloma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.974
RAB34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54239
MDS - Myelodysplastic syndrome_Bone marrow stem cell_GSE4619	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	2.26032
WiDr cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.808
WDR26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30413
EL-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.415
PRDM6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51435
RAB11FIP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32628
PROX1_01_06	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.83515
Ovary cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.157
SKOV-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.071
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.49096
respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.289386
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8766
Epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.956
BHLHA9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53005
NCI-H1105	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SIX5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35075
Hepatitis B	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.156
Pancreatic adenocarcinoma_PAAD_TCGA-LB-A7SX-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sites	GeneRIF Biological Term Annotations	1.0	null
Cyclin D1-CDK4 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.576
Ink sac	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.964
Phellem	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.704
Brain cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.893
hsa-miR-217	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
MBTPS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45213
UBE2G1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.04511
SBDS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86424
OC-314	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Thyroid cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.435
Carcinoma, Lewis Lung	DisGeNET Gene-Disease Associations	1.0	null
Cus cation efflux complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.613
JHOS-4	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
CMK	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
Pancreas disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.51
HDMYZ	CCLE Cell Line Gene Expression Profiles	-1.0	-1.79723
Neuroendocrine tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.08
nucleic acid binding	GO Molecular Function Annotations 2015	1.0	null
Perivitelline space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.925
Bladder urothelial carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.107
NIH-3T3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.008
Acute Myeloid Leukemia_LAML_TCGA-AB-3006-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
glia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.101091
DISP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52616
496100281_HIP_probable Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.13246
primary somatosensory cortex (area S1, areas 3,1,2)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.34687
PMC4595011-pgen.1005555.s001.xlsx-BPTF_UP-regulated-Ensembl_gene_id_BPTF	Rummagene Transcription Factor Associations 2026	1.0	null
YWHAG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66729
Histiocytic lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.467
GSE239844_8_v_0_crizotinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Uveal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.112
Biofilm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.54
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7595
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10905
A4FUK	CCLE Cell Line Gene Expression Profiles	1.0	1.57849
MLX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30642
GABPA	ENCODE Transcription Factor Targets	1.0	null
brain stem	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.064899
Agranulocytosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.439
DV90	CCLE Cell Line Gene Expression Profiles	1.0	1.75436
NECAB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61296
ATG2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36048
SPATA20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96548
Female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.617
H4C1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17355
Pancreatic carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.217
FUT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71531
anterior (rostral) cingulate (medial prefrontal) cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.97991
Bcl-2 family protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.483
ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9297
PCSK1N	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92717
Gastrointestinal stromal tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.019
WEHI-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.99
SK-MEL-5 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.289
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902864
Merkel cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.594
Liver hepatocellular carcinoma_LIHC_TCGA-BD-A2L6-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Breast Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
SLC52A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49491
Demyelinating disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.255
Vesicle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.462
Multiple myeloma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.286
BECKER	DepMap CRISPR Gene Dependency	1.0	2.42953
purine nucleoside binding	GO Molecular Function Annotations 2015	1.0	null
Lysosomal membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.475
NLRP3 inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.465
DEPDC7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92539
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.7382
ZDBF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61645
GSE202434,GSE202438_12_v_5_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Blood serum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.241
ZNF75A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3729
UNC119	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.05018
Rectal benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.357
Umbilical vein endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.807
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6929
LoVo cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.216
MIR34_OE_GDS2755_645_human_HCT116 cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858263
NCIH650	CCLE Cell Line Gene Expression Profiles	1.0	2.31169
methylation	GeneRIF Biological Term Annotations	1.0	null
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0724
EMT-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.302
Internal female genital organ	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.0
ZNF197	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22453
RAB5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48927
Lung adenocarcinoma_LUAD_TCGA-MP-A4TA-01A-21R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Plasmacytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.616
SMCR8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.94769
interleukin-12 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.528
Cerebrovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
MED14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.73641
Peritoneum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.182
Interferon regulatory factor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.369
Extracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.393
HADH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.25021
HDAC2	Pathway Commons Protein-Protein Interactions	1.0	null
thorax	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.359292
HT-29 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.736
CBX3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
atp binding	GO Molecular Function Annotations 2015	1.0	null
gm95	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.633
SW1353	CCLE Cell Line Gene Expression Profiles	1.0	1.35721
DDX60L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01757
ts/a	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.886
pa317	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.865
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.12361
AMER1_OE_GDS4802_549_human_HEK293	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
GABPA_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FGFBP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54187
cervical cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.109479
pyrophosphatase activity	GO Molecular Function Annotations 2015	1.0	null
Bleb	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.728
Gastric ulcer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.055
NCI/ADR-RES cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.668
Brain ventricle	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
SRF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69066
STOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60371
GSE235701,GSE261434_0_v_1_enasidenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
NPY5R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35807
FADU	CCLE Cell Line Gene CNV Profiles	1.0	1.5419
L-929 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.508
Intrinsic component of endoplasmic reticulum membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.223
CMK	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92896
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07673
OVCA-5 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.107
BxPC-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.765
Helper T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.004
colo699n	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.98
Transitional cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.061
Respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.678
TBRG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47612
Gliosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.093
MVB12A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38688
thyroid	GTEx Tissue Gene Expression Profiles	1.0	1.34957
CCDC96	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.26992
Bone sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.137
VDAC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10976
Mature T-cell and NK-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.283
Clathrin coat	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.637
SNU-1040	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.623
Tibialis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.053
Endoplasmic reticulum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.248
SK-BR-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.747
Stomach Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Diffuse large B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.335
Pilus tip	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.673
High grade glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.346
COLO205	DepMap CRISPR Gene Dependency	1.0	6.34058
Crypt	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.618
OTUD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31004
Microvesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.517
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39439
Honey	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.179
TBC1D7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80365
lat1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.821
Biliary tract cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.668
GSE145639_1_v_6_adar_human	RummaGEO Gene Perturbation Signatures	1.0	null
DHRS7B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28741
ZBTB49	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58739
Peripheral blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.714
Diagnosis, Psychiatric	DisGeNET Gene-Disease Associations	1.0	null
SMC1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.24677
BANF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75243
Acute Myeloid Leukemia_LAML_TCGA-AB-2848-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Colorectal adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.709
MFSD6L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05867
GSE140322_3_v_2_imatinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
MID1IP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.771
CHD2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.247
Intracellular vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.522
ZFYVE26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.452
Large granular lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.625
EMILIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36449
M5076 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.025
AURKAIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83564
cellular	GeneRIF Biological Term Annotations	1.0	null
Pain	DisGeNET Gene-Phenotype Associations	1.0	null
GSE236437_0_v_3_aldosterone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Sarcoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.864
DUSP28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48641
Carcinogenesis	DisGeNET Gene-Phenotype Associations	1.0	null
Hemoglobin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.759
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.350084
TP63_01_201	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.73978
ZNF99	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.70835
Nutrition disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.462
S100A9 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.425
PABPC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93199
LRRC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47499
USP17L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78783
cho/dhfr	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.603
Liver cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.904
Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A624-01A-22R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SLC25A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4549
HSPBAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23845
PMC10123531-NIHMS1874945-supplement-Table_S6.xlsx-SOX2_BCAT_cobound_peaks-Gene_Name_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
Cytosol	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.515
PMC5543083-41467_2017_268_MOESM5_ESM.xlsx-Topological_properties_of_nodes-Supplementary_Data_4_Topological_properties_of_the_nodes_present_in_E2F1_interaction_map_E2F1	Rummagene Transcription Factor Associations 2026	1.0	null
CACNG7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01472
Cytolytic granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.798
cage	GeneRIF Biological Term Annotations	1.0	null
glial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.072546
DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.274
Lymphopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.27
Rhabdomyosarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.284
Galectin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.28
ZNF343	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92054
PMC8185471-mmc4.xlsx-D4-DEGs_between_SOX15_KO_DPs_and_WT_DPs_cells_at_day_4_padj_0_05_Log2FoldChange_0_5_SOX15_KO_WT_or_Log2FoldChange_-0_5_SOX15_KO_WT_SOX15	Rummagene Transcription Factor Associations 2026	1.0	null
Ulcerative colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.677
Cervix disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.15
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0318
SLFN13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71959
autism	GAD Gene-Disease Associations	1.0	null
Oral cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.078
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.28848
colo741	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.088
HCFC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.00824
RANGRF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2551
HEK-293F cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.612
liver	HPA Tissue Protein Expression Profiles	-1.0	-2.23547
Adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.779
Skeletal muscle cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.299
Null cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.62
Hemangioendothelioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.578
RBX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78688
Gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.034
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A63W-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IBTK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38927
H3K4me3_MCF-7_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.629506
PMC8202205-NIHMS1706275-supplement-Table_S1.xlsx-Mesend_D2_GATA6-dependent-SYMBOL_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
Muscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.524
TIMM17A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0672
Gastric corpus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.742
SUM185PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.958274
ERF::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.3099
MLYCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70589
Aerial part	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.781
BT549	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.565874
peripheral nerve sheath cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.215928
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
Autosomal recessive disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.127
Carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.957
KS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RJ-01A-11R-A18M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAFK_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.9
F-9 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.771
CSNK2A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46184
Arteriosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.164
NRIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07055
Eht	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.575
LEDGF_KD_GDS1580_249_human_293T cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
H2AFZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
T-84 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.726
RD-ES cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.565
hsa-miR-1254	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Cell plate	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.148
SLITRK5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68817
Retinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.104
ERFL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41828
Flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.299
DLX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24545
KLM1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.96833
Clear cell renal cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.469
primary visual cortex (striate cortex, area V1/17)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.44311
g7	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.906
FN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82375
T47D	CCLE Cell Line Gene CNV Profiles	1.0	1.33691
inflorescence	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063926
Esophageal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.772
SUM185PE	DepMap CRISPR Gene Dependency	1.0	8.36499
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6022-01A-21R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053514
RABEP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46545
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3787
Esophagus - Gastroesophageal Junction	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21225
Large intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.027
reproductive organ benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.214636
Adrenocortical carcinoma_ACC_TCGA-OR-A5K4-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NF-kappaB complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.415
HOP-92 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.524
FEV	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.21
Ovary epithelial cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.865
Colitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.212
Corona	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.699
496100543_FWM_probable Alzheimer's disease_TBI_78_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.13396
ZFAND4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78681
M10 melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.562
GLRX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24258
ACVR2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.62299
posteroventral (inferior) parietal cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.911492
Myeloma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.481
ZNF880	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38289
Lung squamous cell carcinoma_LUSC_TCGA-46-3769-01A-01R-0980-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Stomach carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.973
Erythrocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.129
b16a	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.233
RNA polymerase II transcription repressor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.875
Ovary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.904
balb/3t3clonea31	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.942
B-lymphoblastoid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.822
RUNX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4669
GALM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20911
COX5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56579
CLCN6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44025
Muscularis mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.589
Portal vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.356
Reticulum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.032
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060074
RBBP5	ENCODE Transcription Factor Targets	1.0	null
GGA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96437
TRAMP-C2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.861
ELK1::HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6506
CW2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68185
JUND	JASPAR Predicted Transcription Factor Targets	1.0	null
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1927
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02181
MC1R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19267
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.035
HRH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37959
MAF_01_165	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.597
Leukopenia	DisGeNET Gene-Disease Associations	1.0	null
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4109
GSE79572_0_v_1_pax8_human	RummaGEO Gene Perturbation Signatures	1.0	null
CREB1	ENCODE Transcription Factor Targets	1.0	null
Liver carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.353
GSK3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48169
P-388 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.756
CSNK2A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86025
FOXO1::ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9142
Juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.152
biological_process	GO Biological Process Annotations 2015	1.0	null
Tumor Immunity	DisGeNET Gene-Phenotype Associations	1.0	null
Lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.978
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
CKB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29233
PCMTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51827
HOXC13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97333
Cortical microtubule cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.628
death-inducing signaling complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.718
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.3546
TP63	ChEA Transcription Factor Targets	1.0	null
OSC-19	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053063
Prostate adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.363
SULT2A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87832
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
496100474_FWM_possible Alzheimer's disease_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.15129
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
B-cell lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.252
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1734	CCLE Cell Line Gene CNV Profiles	1.0	1.59089
Astrocytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.968
KATO-III cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.312
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02429
Marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.442
Antral mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.008
Colorectal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.165
HSF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27201
DRM complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.893
HDAC9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1341
Integrin alpha4-beta1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.931
HCC70	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.818673
interleukin-1 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.988
RFX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94713
eGFP-JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Urinary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.493
Viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.039
Squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.324
Apoptosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.781
Musculoskeletal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.299
Colon adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.717
nucleolus	GO Cellular Component Annotations 2025	1.0	null
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051005
TE5	CCLE Cell Line Gene CNV Profiles	1.0	1.52198
Uveal melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.114
Stomach disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.376
BDCA4+_DentriticCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.30304
Breast carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.545
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Y-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE158458_2_v_1_sorafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
MAN2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.82602
Hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.966
Lymphatic system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.455
PMC12186250-NIHMS2085662-supplement-3.xlsx-4111_TEAD4_peaks-Gene_Name_TEAD4	Rummagene Transcription Factor Associations 2026	1.0	null
Lung adenocarcinoma_LUAD_TCGA-50-6673-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
interleukin-2 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.125
GSTA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3277
OV56	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858263
HOXD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57247
PSEN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42544
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.179802
Whole plant	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.374
nucleoside-triphosphatase activity	GO Molecular Function Annotations 2015	1.0	null
Caspase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.6
Granulocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.218
PMC6639357-41467_2019_11150_MOESM4_ESM.xlsx-SupTab1_Activated_genes_diffex-Supplementary_Data_1_Fold_change_and_p-value_of_all_activated_protein_coding_genes_upon_DNMT1-KO_DNMT1	Rummagene Transcription Factor Associations 2026	1.0	null
GSE145639_7_v_2_adar_human	RummaGEO Gene Perturbation Signatures	1.0	null
skin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054596
ZNF691	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42096
Fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.27
nerve sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.193656
VEGF-A complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.007
Oral squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.527
BTBD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42798
496100654_HIP_no dementia_no TBI_86_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.29512
Lynch syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.161
LM3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.154
ZNF732	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.10379
Urinary bladder carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.226
ETV2::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4137
Lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.431
SMMC-7721 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.658
KLN205 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.347
Breast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.635
Mastocytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.382
PRPF19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.28571
Magnetosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.304
Peritoneal exudate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.514
IRF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8616
ATF1	ENCODE Transcription Factor Targets	1.0	null
Overnutrition	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.456
CKMT1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88018
Perturb_15414_KD_KDM3B_SRP187702	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	1.49208
Pancreatic ductal adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.961
H3K4me3_fibroblast of pedal digit skin_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
Ovary adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.222
Hindlimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.927
Serine C-palmitoyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.235
Urinary bladder cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.61
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Glandular stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.709
Colorectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.997
MDA-MB-435S cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.884
ATP-dependent RNA helicase DEAD-box, conserved site	InterPro Predicted Protein Domain Annotations	1.0	null
cell part	LOCATE Curated Protein Localization Annotations	1.0	null
CENPC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.15437
EP300	ENCODE Transcription Factor Targets	1.0	null
alpha-beta T cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.889
Car cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.698
Prostate adenocarcinoma_PRAD_TCGA-EJ-7782-11A-01R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TMEM190	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31277
Myeloid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.914
Rge	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.727
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.355944
Cytoplasmic vesicle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.465
Thymus cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.581
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8534
widely	GeneRIF Biological Term Annotations	1.0	null
FGFR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03947
Renal cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.311
RNF103	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03498
IQCC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87015
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
Uterine cervix	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
Gut mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.898
SP2/0-AG14 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.995
MALME-3M cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.727
Rhizome	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.13
Tibialis anterior	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.951
Mastocytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.437
Upper respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.488
uterine fibroid	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.323365
NCCSTCK140	CCLE Cell Line Gene CNV Profiles	1.0	1.46814
Adrenocortical carcinoma_ACC_TCGA-OR-A5JK-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PDXK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36826
Anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.451
Autism	DisGeNET Gene-Disease Associations	1.0	null
colo320dm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.931
TALL-104 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.553
CELF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85325
Rectal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.997
SK-MEL cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.602
Head and neck squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.943
Thymus lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.608
GALNT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85786
Carcinoma Of Lung	DisGeNET Gene-Disease Associations	1.0	null
Epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.913
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.213112
GSE74251_0_v_1_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
Calu-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.745
Placental cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.546
CTTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33109
MBT-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.864
TRDMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36396
Squamous epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.394
496100532_FWM_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.08933
primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01437
SEMA3F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75669
TAB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09883
Plumule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.903
TXNDC16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1208
thoracic benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.368149
Tumor Cell Invasion	DisGeNET Gene-Phenotype Associations	1.0	null
HEY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.5857
Colorectal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.891
FOXO1::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1805
Nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.399
Gastric ulcer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.154
primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.58502
H3K27me3_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TSPOAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.52812
SF539	CCLE Cell Line Gene CNV Profiles	1.0	1.44768
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.310652
CFPAC-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.051
Fever	DisGeNET Gene-Phenotype Associations	1.0	null
Esophageal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.132
hypomethylated	GeneRIF Biological Term Annotations	1.0	null
DAUDI cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.993
CCD-841-CoN cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.748
HeLa cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.992
MFSD9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90144
PDLIM5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59669
KG-1A cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.722
SLC35C1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08874
Prostate gland cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.085
HSPA1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30301
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0237
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054505
ATP6AP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64522
Cancer stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.916
PAX2_01_72	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61073
Thrombocytopenia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.333
HNRNPA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69445
STAT1	JASPAR Predicted Transcription Factor Targets	1.0	null
Retinal cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.308842
Lymphatic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.443
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A23L-01A-11R-A16R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE203485_1_v_0_zdhhc2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
intracellular non-membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
TRAMP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.271
NUP155	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7521
Medullary colon carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.072
Complex of collagen trimers	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.752
Colonic mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.67
salivary gland	HPA Tissue Protein Expression Profiles	1.0	0.906018
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.904
Dk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.59
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.297
Bulb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.689
ZSCAN25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17473
CENPW	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82464
ZNF667	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3352
Cardiovascular system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.869
Sarcoma_SARC_TCGA-K1-A6RV-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-06A-22R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mononuclear phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.286
Gastric gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.15
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.357086
anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.03133
ZBTB7A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3903
H3K4me3_K562_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
ZNF93	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7929
H2BC13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55219
Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cpg	GeneRIF Biological Term Annotations	1.0	null
GSE231720,GSE231724_3_v_0_setd2_human	RummaGEO Gene Perturbation Signatures	1.0	null
effect	GeneRIF Biological Term Annotations	1.0	null
COX14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67985
NDST2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05848
enterochromaffin-like cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.532
FAM110D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96818
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00986
Perturb_76_KD_MAP3K7/CHD1_SRP310152	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
Macrophage cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.156
LNCaP clone FGC	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.519
Fc receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.601
Kidney	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.417
Pilus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.418
Tumor necrosis factor receptor superfamily complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.309
Water	HMDB Metabolites of Enzymes	1.0	null
NEIL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02442
Glassy Cell Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
B16-F1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.919
Retinoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.078
Adult Fibrosarcoma	DisGeNET Gene-Disease Associations	1.0	null
EN	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YV-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acquired immunodeficiency syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.088
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1651
PLEKHH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15489
CCDC28B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02859
FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1583
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10R-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.046547
anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.826267
Mitochondrial envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.059
NELFE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72539
CYP2A13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7242
TRAM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7268
B-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.272
UM-UC-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Transitional cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.609
H3K79me2_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
helicase activity	GO Molecular Function Annotations 2015	1.0	null
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041292
primary visual cortex (striate cortex, area V1/17)_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.03893
Brain disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.798
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8446
Type III protein secretion system complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.162
Flagellate	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.289
TEX41	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95245
HSDL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56883
Periodontal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.201
graft-versus-host disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.382
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.4855
ventrolateral prefrontal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.30534
SUB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43833
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Oral cavity cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.609
Colonic epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.922
Bone marrow disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.954
Mammary gland tumor cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.008
GSE202434,GSE202438_12_v_11_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3376
adrenal gland	HPA Tissue Protein Expression Profiles	1.0	0.906018
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935496
FOXQ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87314
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
WDR62	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74021
HS578T	CCLE Cell Line Gene CNV Profiles	1.0	1.80597
internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.81565
MDA-MB-231 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.325
E2F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7579
UNKL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38826
pre-B acute lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.898
TNP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07636
EP300_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Caco-2/15 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.525
Rectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.997
CV-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.222
PMC5352183-oncotarget-08-624-s009.xlsx-Table_S20-1_indicates_that_the_gene_is_both_a_TP53-MW_and_a_TP53-MSN_gene_in_the_correponding_cancer_and_0_indicates_not_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
GSE48812_4_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
LRRN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04695
Sarcoma_SARC_TCGA-FX-A3RE-01A-11R-A22K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glioblastoma multiforme cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.525
OUMS27	CCLE Cell Line Gene CNV Profiles	1.0	1.47308
Colonic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.907
ZSCAN31	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30356
Lewis lung carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.251
HEp-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.337
Depression	DisGeNET Gene-Phenotype Associations	1.0	null
TMEM200B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36752
UCP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10632
PPP2R1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14774
Prostate cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.401
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5767
TST	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67769
AGS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.915
ELOVL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54013
AP2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.00594
BAD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95795
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7245-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
External encapsulating structure	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.332
Endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.585
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AB-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF362	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46028
Spore wall	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.624
amygdaloid complex_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.865054
membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.058376
SLITRK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87964
ZFP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14807
OSGEPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07692
SNRNP40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69059
Renal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.371
lm10	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.742
IDH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55992
Trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.709
RAW-264.7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.119
Mesenteric lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.409
RSPRY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65604
Replication fork	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.588
PHF20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71529
Heart disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.168
Squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.308
MT-CO3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55461
GSTK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57886
LPCAT4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95875
GSE223893_11_v_10_setd2_human	RummaGEO Gene Perturbation Signatures	1.0	null
HEBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21555
127399	DepMap CRISPR Gene Dependency	1.0	8.11735
Fibroblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.994
PCM6	CCLE Cell Line Gene Expression Profiles	1.0	1.84967
Disc	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.745
Thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.876
U-251MG cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.79
ERLIN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.90523
496100307_FWM_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.24862
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20517
GSE174701_5_v_2_maml3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Skin	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.915374
p1.htr	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.919
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.74755
FST	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62047
Anxiety Generalized	DisGeNET Gene-Disease Associations	1.0	null
RASL11A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86942
spleen	GTEx Tissue Gene Expression Profiles	-1.0	-0.884934
CACO-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.173
corl105	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.618
d17	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.037
Uterine disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.14
Asthma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.171
melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.158434
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7421-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Malignant pleural mesothelioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.31
Esophagus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.401
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_14_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
Disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.18
CD34+	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.15984
CAL33	CCLE Cell Line Gene CNV Profiles	1.0	1.47807
Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A6C0-01A-12R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2865-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.017
AMO1	DepMap CRISPR Gene Dependency	1.0	3.03001
gl1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.346
DHRS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45432
TMED4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55973
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05424
GSE169356_0_v_4_ivermectin_human	RummaGEO Drug Perturbation Signatures	1.0	null
PPRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65122
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hsa-miR-3658	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A2PC-01A-11R-A206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.99381
NCI-H1975 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.994
HMGCL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90213
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052251
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976432
ADSS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74564
SuperiorCervicalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.28064
cerebellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080869
PMC12753515-Table2.XLSX-G5-specific_down_only_top_500-EGR2_EGR2	Rummagene Transcription Factor Associations 2026	1.0	null
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058347
Fruit juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.597
PMC4060771-170289.f1.pdf-393-DMRT2_DMRT2	Rummagene Transcription Factor Associations 2026	1.0	null
PSMB10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07909
cervical	GeneRIF Biological Term Annotations	1.0	null
testis	GeneRIF Biological Term Annotations	1.0	null
YY1_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991619
JJN3	DepMap CRISPR Gene Dependency	1.0	4.59014
SLC6A15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44948
ZFYVE9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6671
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02181
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07673
BNC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4093
Lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.778
uterine benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.321545
RPMI-8226 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.081
ESCRT II complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.548
metencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078577
Metastatic Malignant Neoplasm To Brain	DisGeNET Gene-Disease Associations	1.0	null
LNCaP cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.636
KNS-81-FD	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
NRN1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66505
Liver hepatocellular carcinoma_LIHC_TCGA-K7-A5RG-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.61702
Endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.186
Epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.517
PER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52683
EB2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37389
nctcclone929	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.609
FASLG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10088
inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.15183
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48041
ZC3HAV1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3532
DNA gyrase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.278
MHC protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.216
Disease Susceptibility	HuGE Navigator Gene-Phenotype Associations	1.0	null
GSE238116_1_v_0_egr1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.194
GSE239688_2_v_1_canagliflozin_human	RummaGEO Drug Perturbation Signatures	1.0	null
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054573
Small intestine cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.133
OGA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61438
GR-ST	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Interferon regulatory factor 5 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.638
PIGM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77893
Thyroid gland disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.461
U-937 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.53
ARFGAP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1525
Kidney disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.243
posteroventral (inferior) parietal cortex_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.18612
MYLIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78238
ATAD2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51082
Mammary gland cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.013
Clathrin coat of endocytic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.69
Thorax	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.606
H-1299	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.964
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7398-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC9730246-Table_7.xlsx-LPS_Val_down-Upstream_Regulator_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
Lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.978
primary motor cortex (area M1, area 4)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.851093
ETV2::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.0721
leiomyoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.205916
Leukocyte disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.058
Rectum cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.966
ETV5::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.7523
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RX-A8JQ-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pharynx	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
UBE2J2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47384
CPTP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60589
NSMF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15958
Rectum adenocarcinoma_READ_TCGA-F5-6810-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
mediodorsal nucleus of thalamus_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.918259
LUZP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61949
IRS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32762
Cecum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.903
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.057351
Cell surface	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.664
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.824013
Human - Tonsil - L2 - Light Zone GCBC	HuBMAP Azimuth Cell Type Annotations	1.0	null
Testicular cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.126
TBC1D14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8319
orbital frontal cortex_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.67795
Colitis	DisGeNET Gene-Disease Associations	1.0	null
Breast epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.099
GSE151612_0_v_8_pracinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC4595011-pgen.1005555.s001.xlsx-MITF_UP-regulated-Ensembl_gene_id_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
ANKRD50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99563
IDS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01472
PRR29	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57714
dorsolateral prefrontal cortex_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.948718
MST1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3763
b16-f10 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.327164
RHOT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25274
LIN7A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22085
BHK-21 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.327
MDAMB361	CCLE Cell Line Gene CNV Profiles	1.0	1.80337
drug	GeneRIF Biological Term Annotations	1.0	null
HCC1187	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63531
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_15_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
Vas efferens	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.514
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GR-7353-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
melanosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.193719
SESN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.93288
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2136
TBC1D22B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76893
eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.094146
CHO-K1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.323
membrane-bounded organelle	LOCATE Curated Protein Localization Annotations	1.0	null
POLR2A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
messa/dx5	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.002
EBF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53906
gastrointestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.094598
KLF14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86836
CHRNA9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.13968
RARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9565
Tibia	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.5
TRIM71	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16946
Colorectal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.992
Lung fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.543
NCO2	DepMap CRISPR Gene Dependency	1.0	5.78193
LNCAP-CLONE-FGC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
DLGAP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16319
spinal cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.088721
Lymphoid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.826
ACTR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75243
except	GeneRIF Biological Term Annotations	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9H4-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cardiac Arrest	DisGeNET Gene-Disease Associations	1.0	null
ZNF182	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90763
RAB18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.84957
Multivesicular body	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.437
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.1907
PAFAH1B2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82857
ATPase dependent transmembrane transport complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.877
TMEM125	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.896
Endolysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.555
PMC12186250-NIHMS2085662-supplement-3.xlsx-4111_TEAD4_peaks-Nearest_Ensembl_TEAD4	Rummagene Transcription Factor Associations 2026	1.0	null
ZNG1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.78622
anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050768
HS-445	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PKNOX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56328
MTERF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07512
Retinoblastoma	DisGeNET Gene-Disease Associations	1.0	null
CCNB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.93669
intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.06997
LSR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39569
ALS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10447
SW-1116 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.466
KMS27	CCLE Cell Line Gene Expression Profiles	1.0	1.60884
GSE201309_5_v_3_matrine_human	RummaGEO Drug Perturbation Signatures	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
RUFY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23508
ATG9A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35346
ZFTRAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89925
Smallpox	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.319
Cervical adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.017
NB1643	DepMap CRISPR Gene Dependency	1.0	2.36556
Prostate adenocarcinoma_PRAD_TCGA-V1-A8WV-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Periplasmic space	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.574
PDS5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78285
Coronavirus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
A-375 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.609
Breast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.647
HACD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56466
LS	DepMap CRISPR Gene Dependency	1.0	6.29692
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60481
organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.164359
Hepatocellular carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.343
Coronary artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.045
Lytic vacuole	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.374
tetraspanin-enriched microdomain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.448
Seedling	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.897
KARPAS-422 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.524
Malignant Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2025	1.0	null
PPIH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89792
Arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.619
MNAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66475
intracellular organelle	GO Cellular Component Annotations 2015	1.0	null
STK38L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94178
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.847484
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5519
OTUD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06923
MiaPaCa-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.674
PANX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52951
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DNA recombinase mediator complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.747
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4698-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
METTL21C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65522
Vaccinia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.836
Gastric cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.072
ZNF648	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.90654
Endosome membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.574
ETV3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6936
nucleus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
FaDu cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.038
T-cell acute lymphoblastic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.076
Blood vessel endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.186
ARL4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33912
Integral component of organelle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.245
M-07E cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.595
AP3M2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45016
ACHN cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.968
Urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.741
GSE202434,GSE202438_2_v_5_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NPC	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.938
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.90732
MICAL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76119
Urinary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.348
Melanoma	DisGeNET Gene-Disease Associations	1.0	null
ncih727	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
ZNF135	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89956
Primary Malignant Neoplasm Of Lung	DisGeNET Gene-Disease Associations	1.0	null
XPR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09316
HCC1806	CCLE Cell Line Gene Expression Profiles	1.0	1.79958
GABPA_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LRFN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56189
Bt	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.728
SYNCRIP_OE_GDS4596_85_human_SW480	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
GSE48812_4_v_6_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
IMR-32 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.657
MPPE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59246
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST18-Supplementary_Data_18_Gene_burden_for_deletions_by_subtype_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
cytoplasmic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.058376
EVSA-T	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KMS20	CCLE Cell Line Gene Expression Profiles	1.0	1.35935
ZNF786	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48806
Lung adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.021
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6303
Hypertension	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.096
Toxic encephalopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.376
Gastric mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.756
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.027
TC138	DepMap CRISPR Gene Dependency	1.0	11.287
TESK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.95547
Esophageal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.754
Sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.513
pineal_day	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.02889
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7693
Myeloid neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.939
SEPTIN7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22873
K Homology domain	InterPro Predicted Protein Domain Annotations	1.0	null
Endometrial Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
DHTKD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67471
PRR14L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37288
ribonucleoside binding	GO Molecular Function Annotations 2015	1.0	null
Urinary bladder transitional cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.063
CRELD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15538
GSE240386,GSE242143_1_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Nasopharyngeal carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.035
Nasopharyngeal carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.103
Lung adenocarcinoma_LUAD_TCGA-49-6743-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-44-7669-01A-21R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ARFIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23625
Peripheral T-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.281
LHFPL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10727
RPMI8226	CCLE Cell Line Gene Expression Profiles	1.0	1.501
gallbladder carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.319363
AIM2 inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.681
Blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.513
Human immunodeficiency virus infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.199
Ovary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.839147
KLK7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77323
ventrolateral prefrontal cortex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.87166
Integrin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.911
Mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.776
Ovary cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.889
oaw42	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.533
HuH-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.724
Lamina propria	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.426
Uterine endometrial cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.816
DSTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60181
GNB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36761
primary auditory cortex (core)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.826267
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890909
ATP11C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18733
Amelanotic melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.008
PDCD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32813
icSARS CoV_7Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.39429
Glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.097
SiHa cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.182
Leaf	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.903
TBL1Y	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53468
HOMEZ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11931
HFL-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.569
PYM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02779
Plasma membrane signaling receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.164
Phosphoric acid	HMDB Metabolites of Enzymes	1.0	null
CSF1-CSF1R complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.046
primary visual cortex (striate cortex, area V1/17)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.02229
Digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.667
ETV2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25027
Bm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.012
internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SKMEL30	DepMap CRISPR Gene Dependency	1.0	2.10157
Excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.682
P3H4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73438
igr37	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.802
Leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.235
Colonic epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.854
NAPRT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67408
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1148
Large intestine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.506
GSE231720,GSE231724_2_v_0_setd2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Umbilical vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.925
SK-MEL-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.765
epidermal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057626
UMUC14	DepMap CRISPR Gene Dependency	1.0	2.39123
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.155
PrefrontalCortex	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.02172
GSE238018_3_v_4_mxra8_human	RummaGEO Gene Perturbation Signatures	1.0	null
CEBPB	ENCODE Transcription Factor Targets	1.0	null
negative	GeneRIF Biological Term Annotations	1.0	null
NCIH2030	CCLE Cell Line Gene CNV Profiles	1.0	2.20946
CAMK2N1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51413
496100343_TCx_possible Alzheimer's disease_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.66689
LRRC40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41701
neoplastic	GeneRIF Biological Term Annotations	1.0	null
digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05336
Vasculature	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.195
CT26.CL25 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.196
HLE	CCLE Cell Line Gene Expression Profiles	1.0	1.97593
stigma	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.375368
METTL18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23139
Stomach cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.356
Red bone marrow	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.617
NFYB_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lateral ventricle	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
3t6	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.614
C17orf58	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39327
Eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.516
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A20V-01A-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
neuroendocrine cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.192266
SNU-C4	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.796
TFAP4::ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.6046
ventrolateral prefrontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.891301
ELF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0212
Lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.247
LRIG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11967
Pheochromocytoma and Paraganglioma_PCPG_TCGA-PR-A5PF-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
endometrium	HPA Tissue Protein Expression Profiles	-1.0	-1.15659
Exoskeleton	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.617
SK-MES-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.703
Cell periphery	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.721
Cirrhosis	DisGeNET Gene-Disease Associations	1.0	null
GOLGA8B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80561
tissues	GeneRIF Biological Term Annotations	1.0	null
cls1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.629
GSE202434,GSE202438_13_v_0_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.954
Bone marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.765
FSTL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08894
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.393
SP7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15227
MONOMAC1	DepMap CRISPR Gene Dependency	1.0	11.6082
HDAC1	ENCODE Transcription Factor Targets	1.0	null
Sarcoma_SARC_TCGA-FX-A3TO-01A-11R-A22K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CA9-22	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
striatum_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.824526
Chorioallantois	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.384
brain cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.067073
RERFGC1B	DepMap CRISPR Gene Dependency	1.0	3.08322
organelle	GO Cellular Component Annotations 2015	1.0	null
Gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.876
Spleen	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.919
Myeloid dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.1
PMC5543083-41467_2017_268_MOESM5_ESM.xlsx-Interactions_in_E2F1_map-Supplementary_Data_4_Interactions_between_nodes_in_E2F1_map_Cytoscape_version_E2F1	Rummagene Transcription Factor Associations 2026	1.0	null
Muscular atrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.333
colo679	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.664
Acn	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.541
ATP-binding cassette (ABC) transporter complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.948
Micronucleus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.746
MLF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86597
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.336
resistance	GeneRIF Biological Term Annotations	1.0	null
Outer membrane protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.161
Encephalomyelitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.262
NS-0 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.879
CASD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29688
status	GeneRIF Biological Term Annotations	1.0	null
KB cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.574
LAMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77164
GCM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8651
RSRC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20986
Ovarian cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.421
TIRAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6991
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
Natural killer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.346
Acute Myeloid Leukemia_LAML_TCGA-AB-2891-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Glioblastoma multiforme cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.155
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.4921
Opioid Use Disorder	DisGeNET Gene-Disease Associations	1.0	null
TUSC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9587
Cervical adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.992
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0942
Lung squamous cell carcinoma_LUSC_TCGA-21-1081-01A-01R-0692-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.756604
Buffy coat	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.074
MRPS16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86232
Artery disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.463
Mammary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.702
hela-s3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.483596
C99	DepMap CRISPR Gene Dependency	1.0	2.49915
Colorectal adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.526
H3K4me3_LNCaP clone FGC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Collagen network	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.741
KMT5C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78098
HCC1143	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00401
Colon Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Pharynx cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.592
Lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.292
NCIH2106	CCLE Cell Line Gene Expression Profiles	-1.0	-2.38842
Viral infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.025
UAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62178
BAT3 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.931
Colonic epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.668
QPCTL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46157
496100362_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.07656
RM-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.629
SP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41998
HS944T	CCLE Cell Line Gene Expression Profiles	-1.0	-2.35223
dorsolateral prefrontal cortex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.999353
Intestinal mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.795
a2780cis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.773
GSE201309_5_v_7_matrine_human	RummaGEO Drug Perturbation Signatures	1.0	null
Heterochromatin domain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.223
Pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.053
SMAD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74283
Benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.025
OPA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53061
pre-malignant neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.071
hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042722
Clathrin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.601
Nasopharynx carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.505
Fibrosarcoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.809
GSE155972_0_v_1_setdb1_human	RummaGEO Gene Perturbation Signatures	1.0	null
JHOS2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
Lung adenocarcinoma_LUAD_TCGA-55-8620-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
frequently	GeneRIF Biological Term Annotations	1.0	null
Organelle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.503
SVEC4-10 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.68
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10905
ING3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12815
GARIN1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0548
SAP130	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74503
SOX14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.817
Colo-320 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.396
SAOS-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.895
Pancreatic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.207
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041594
RBM39	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.82096
Blood platelet disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.334
Mammary epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.078
Intestine	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.028
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059597
Marginal zone lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.039
AARD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65091
Ripoptosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.925
dhd/k12/trb	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.14
BEX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36886
PHF11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96225
NDUFB7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47722
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-A6DE-01A-22R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Mast cell neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.721
FAM120AOS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80984
Autophagosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.729
NCIH2122	DepMap CRISPR Gene Dependency	1.0	3.69255
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.817
NCIH1694	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35572
ELK1_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
K-562 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.278
T-24 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.099
NCIH226	DepMap CRISPR Gene Dependency	1.0	3.09979
Astrocytoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.008
breast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.417718
Female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.634
Intestinal epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.765
MIH complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.776
ADAMTS10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25943
Vascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.734
RETREG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51505
Lupus erythematosus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.131
Colonic adenoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.555
HSC4	CCLE Cell Line Gene Expression Profiles	-1.0	-1.76929
RNF208	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76581
B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.003
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90145
Gastric epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.06
Endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.88
ADGRL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49125
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040518
FBXO10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61347
GSE144500_7_v_6_ventx_human	RummaGEO Gene Perturbation Signatures	1.0	null
Rheumatoid arthritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.476
intracellular organelle	LOCATE Curated Protein Localization Annotations	1.0	null
Endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.912
Mental Depression	DisGeNET Gene-Disease Associations	1.0	null
Violence	DisGeNET Gene-Phenotype Associations	1.0	null
Bladder carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.641
IMR32	DepMap CRISPR Gene Dependency	1.0	2.66317
Neoplasm Metastasis	DisGeNET Gene-Phenotype Associations	1.0	null
Prostate disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.4
Corolla	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.625
ZNF883	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78362
snail	GeneRIF Biological Term Annotations	1.0	null
glioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.116532
GSE48812_0_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
Hypopharyngeal carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.034
CBX3	ENCODE Transcription Factor Targets	1.0	null
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.125
GSE145639_7_v_4_adar_human	RummaGEO Gene Perturbation Signatures	1.0	null
Lung fibroblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.252
meningioma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.382966
RARA_01_51	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.50447
Familial adenomatous polyposis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.317
Skin cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.092
Subcutaneous tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.305
Plasmacytoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.418
Acute myeloid leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.791
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.07
hela cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.14158
ncih1650	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.694
primary auditory cortex (core)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.89843
nuclear lumen	GO Cellular Component Annotations 2023	1.0	null
TTLL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10914
Head and neck squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.082
carbohydrate derivative binding	GO Molecular Function Annotations 2015	1.0	null
striatum_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.31067
anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11082
SUM159PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-2.35012
intracellular membraneless organelle	GO Cellular Component Annotations 2025	1.0	null
Hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.534
Fumarate reductase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.647
ANA-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.038
Ehrlich ascites carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.92
lm8	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.215
Slime layer	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.669
TMEM138	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.18894
MOPC-315 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.893
PRRC2C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.81937
GSE239844_7_v_10_crizotinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
LRCH4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26642
Chronic lymphocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.989
Non-Small Cell Lung Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
Bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.704
MRPL30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55379
NCIH1755	DepMap CRISPR Gene Dependency	1.0	5.20641
WTX_OE_GDS4802_325_human_HEK293 embryonic kidney cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
DEAD/DEAH box helicase domain	InterPro Predicted Protein Domain Annotations	1.0	null
Periodontitis	DisGeNET Gene-Disease Associations	1.0	null
NCIH1436	CCLE Cell Line Gene Expression Profiles	1.0	1.64511
NHEC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.527
Ovarian surface epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.778
HFM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70783
interleukin-12 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.613
19567819-SuppTable1	GeneSigDB Published Gene Signatures	1.0	null
mfe296	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.527
ERF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5549
MRPL37	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52868
H2AFZ_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NEU	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.864
primary motor cortex (area M1, area 4)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.918259
GSE153443_1_v_3_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
BLZF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28206
RAG cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.793
SLC2A4RG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.8945
Nausea	DisGeNET Gene-Phenotype Associations	1.0	null
Bone cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.543
K Homology domain, type 1	InterPro Predicted Protein Domain Annotations	1.0	null
Lung non-small cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.517
mediodorsal nucleus of thalamus_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10252
Combined immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.193
SAP30BP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33334
GNA11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86419
V-79 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.644
Gastric antrum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.231
mp6	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.481
15756260-Table1	GeneSigDB Published Gene Signatures	1.0	null
Endosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.283
SLC25A37	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69879
FAM111B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8345
PCOLCE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52266
MYC_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HENMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39744
AGO4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.75566
PLEKHA8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23718
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1674
Child Development Disorders, Pervasive	HuGE Navigator Gene-Phenotype Associations	1.0	null
duodenum	HPA Tissue Protein Expression Profiles	1.0	0.906018
p53	GeneRIF Biological Term Annotations	1.0	null
NCI-H460 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.309
Lung cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.297
Tumor Progression	DisGeNET Gene-Phenotype Associations	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A551-01A-21R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH1930	CCLE Cell Line Gene Expression Profiles	1.0	1.68314
Bone cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.282
Central nervous system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.375
Retrotransposon nucleocapsid	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.717
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16894
Urinary bladder cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.225
KLE	DepMap CRISPR Gene Dependency	1.0	2.21379
Cholangiocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.945
EMD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79507
Umbilical vein endothelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.906
L-5178-Y cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.622
Malignant Tumor Of Colon	DisGeNET Gene-Disease Associations	1.0	null
REEP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96021
Neutrophil	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.154
Parkinson Disease	DisGeNET Gene-Disease Associations	1.0	null
Atherosclerosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
Reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.694
Head and Neck squamous cell carcinoma_HNSC_TCGA-QK-A6VC-01A-23R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute lymphoblastic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.611
Autoimmune disease of the nervous system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.271
Lymphocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.847
gynoecium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.159398
BAIAP2L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.68041
Cellular anatomical entity	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	3.075
Neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.368
Endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.265
ventrolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.76813
GSE210093_0_v_2_taf15_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ECT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3968
4T1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.318
GSE121043_0_v_1_aldh1a1_human	RummaGEO Gene Perturbation Signatures	1.0	null
BMAL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29187
PMC11111877-41598_2024_62256_MOESM7_ESM.xlsx-Table_S1-Supplementary_Table_S1_The_intersect_genes_of_AR_and_RNA_AR	Rummagene Transcription Factor Associations 2026	1.0	null
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42585
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8958
posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.07237
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.72812
CORL47	DepMap CRISPR Gene Dependency	1.0	2.1569
C-33A cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.723
ECGI10	CCLE Cell Line Gene Expression Profiles	-1.0	-2.01111
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNUC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38965
Lymph vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.556
Reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Gastric adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.914
RUNX2	ChEA Transcription Factor Targets	1.0	null
CT26.WT cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.592
SK-HEP-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.166
HAND2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39704
RERFLCSQ1	CCLE Cell Line Gene CNV Profiles	1.0	1.82953
RELB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61542
RTN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.07289
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.788964
Monocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.263
Fibroblast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.213
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.268
Prostate adenocarcinoma_PRAD_TCGA-EJ-7782-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CDK8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56723
Organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.862
Hs-578T cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.063
NXT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45207
MAGOHB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26018
vaginitis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.393001
Mesothelioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.963
Cellular bud	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.6
Measles	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.212
496100385_TCx_dementia_no TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.29157
Renal epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.628
Benign vascular tumor	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.805
HCC95	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54386
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.186397
Depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.051
SR cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.573
PIM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75782
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36149
SFXN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97555
MDA-MB-361 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.501
catalytic activity	GO Molecular Function Annotations 2015	1.0	null
lung	HPA Tissue Protein Expression Profiles	1.0	0.906018
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3B3-01A-12R-A206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EOMA cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.623
Outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.99
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
DGKE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3781
Peptic Ulcer	DisGeNET Gene-Disease Associations	1.0	null
monocyte-derived dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.975
lb24	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.709
Acute lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.762
TMEM265	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58542
melanoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062632
u266b1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.69
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Z-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Colonic adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.67
Cervix Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
T-cell non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.403
TJP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95041
Mature B-cell neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.129
ventrolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.40981
Helicobacter Pylori (H. Pylori) Infection In Conditions Classified Elsewhere And Of Unspecified Site	DisGeNET Gene-Disease Associations	1.0	null
LTB4R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75568
PMC8423434-mmc7.xlsx-SOX2_HENSM-Genes_n_2733_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A4AC-01A-21R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TNFSF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19886
CPNE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.786
Alcohol Use Disorder	DisGeNET Gene-Disease Associations	1.0	null
Cervical cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.152
DVL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13396
NCIH747	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83479
13c4	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.586
GSE121198,GSE129779_0_v_1_arid1a_human	RummaGEO Gene Perturbation Signatures	1.0	null
Immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.455
Rectum adenocarcinoma_READ_TCGA-EF-5830-01A-01R-1660-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COX5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37055
Hodgkin's lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.796
CEBPB_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A115-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PTP4A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52834
histone	GeneRIF Biological Term Annotations	1.0	null
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05549
MCIDAS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48644
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20517
M cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.354
POLR2A	ENCODE Transcription Factor Targets	1.0	null
Fetal Brain Male	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	0.852878
BPNT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47671
NMRK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09183
NDUFB5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57415
Skin carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.53
Head and neck squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.028
Transitional cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.121
Pancreatic ductal adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.929
Inflammasome complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.837
PMC11474056-pnas.2404841121.sd01.xlsx-Supplemental_Table_8_Fig1G-H-Supplemental_Table_8_Transcriptomic_overlap_between_LPS_and_Sepsis_and_or_Tuberculosis_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
MT-CO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65857
STING complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.55
JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055119
Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3777-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ls123	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.899
HMGN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05843
Glycine cleavage complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.266
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32506
Colon-26 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.641
GSE226770_1_v_6_atrx_human	RummaGEO Gene Perturbation Signatures	1.0	null
ETS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2552
Mesothelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.191
OPM-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34731
Efflux pump complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.555
KDM3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19628
primary motor cortex (area M1, area 4)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.832265
Pinealocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.575
PLC-PRF-5 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.939
COMTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.88808
small molecule binding	GO Molecular Function Annotations 2015	1.0	null
NB1	DepMap CRISPR Gene Dependency	1.0	2.20639
Urinary system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.419
SW-620 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.385
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4225
immune system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040461
Barrett's esophagus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.655
LYSP100-associated nuclear domain	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.579
SORD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86667
Mpk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.975
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
Epithelial ovarian cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.983
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83387
methionine-importing ABC transporter complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.828
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.79461
GSE202434,GSE202438_4_v_1_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TFAP4::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.7419
HCC1599	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09288
Rectum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.932
SK-MEL-30 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.719
GSK3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40894
RSL24D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55011
NCI-H929 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.645
ribonucleotide binding	GO Molecular Function Annotations 2015	1.0	null
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935496
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979024
HEPA 1-6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.138
biliary tract cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.090243
Root nodule	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.281
primary motor cortex (area M1, area 4)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.44311
THBS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80637
CHGB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34995
reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.058625
patu8988t	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.758
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
OVK18	CCLE Cell Line Gene Expression Profiles	1.0	1.38623
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6548
MV4-11 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.714
Osteosarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.383
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.7138
Integrin alphav-beta5 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.046
RRAGA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36172
testis	HPA Tissue Protein Expression Profiles	1.0	0.906018
MYO10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02873
Nasopharyngeal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.493
Acute leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.653
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.085839
neuroendocrine tumor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.917779
Gastrocnemius	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.19
NCI-H209 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.728
Glioblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.331
Hypopharyngeal squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.037
TINAGL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92033
adenyl nucleotide binding	GO Molecular Function Annotations 2015	1.0	null
Lung adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.118
Secondary Malignant Neoplasm Of Lung	DisGeNET Gene-Disease Associations	1.0	null
GSE240439_1_v_2_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
MPT synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.442
Teratocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.401
HMGN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08615
SNAI1_OE_GDS4596_344_human_SW480 - Colorectal cancer cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
NCI-H358 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.073
LCN12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03545
POU4F1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.38693
ion binding	GO Molecular Function Annotations 2015	1.0	null
Colonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.176
GSE239688_2_v_3_canagliflozin_human	RummaGEO Drug Perturbation Signatures	1.0	null
H3K27me3_CD3 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
mrc9	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.594
Ovarian Neoplasm	DisGeNET Gene-Disease Associations	1.0	null
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4086
Neuropathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.155
inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.857822
I-cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.644
Large B-cell lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.408
Liver hepatocellular carcinoma_LIHC_TCGA-XR-A8TG-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LMBR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23871
RYK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87796
GSE160304,GSE163392_2_v_3_zswim8_human	RummaGEO Gene Perturbation Signatures	1.0	null
methylcrotonoyl-CoA carboxylase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.576
NR2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7772
RGL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10075
Heparanase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.955
Immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.447
Lymphocytic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.78
GSE239688_2_v_5_canagliflozin_human	RummaGEO Drug Perturbation Signatures	1.0	null
Promonocytic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.53
RARA_KD_GDS4065_42_human_MCF-7	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
B16-F10 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.204
Caki-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.921
Silver ion transmembrane transporter complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.613
SP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63992
thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.590948
Arteriosclerotic cardiovascular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.152
Intrinsic component of organelle membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.208
CARHSP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15493
Gastric juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.976
ZFHX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89328
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11739
RKO cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.627
EXTL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01755
Myeloid progenitor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.868
Heavy Drinking	DisGeNET Gene-Disease Associations	1.0	null
Kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.128
Uterus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
CTRL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44671
Female reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.464
H3K9ac_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC38	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20386
SU-DHL-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.057154
GABPA_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PPP4R3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26442
ZNF776	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.71584
SRCAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.41602
Hepa-1c1c7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.951
B16F10-Nex2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.761
GSE175787_13_v_6_rhoc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Germ cell cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.147
Immunoglobulin complex, circulating	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.008
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.072
BT-474 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.463
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7915-01A-11R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Memory T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.234
FEM1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21318
Solid cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.376
colo320hsr	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.677
NCI-H2347	COSMIC Cell Line Gene Mutation Profiles	1.0	null
orbital frontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.38075
PL45	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50826
fanconi's anemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.160203
ZNF41	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99376
Acute Myeloid Leukemia_LAML_TCGA-AB-2810-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCFC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81204
Osteoclastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.322
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19E-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Respiratory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.684
colo829	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.677
cytoplasmic membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.059125
Anaplastic thyroid cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.599
Malignant mesothelioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.199
Macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.729
STEAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3331
MG-63 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.035
Intestinal cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.358
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81N-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
adenyl ribonucleotide binding	GO Molecular Function Annotations 2015	1.0	null
Gastrointestinal system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.955
Internal male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.491
NDUFV1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52893
Renal cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.468
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902864
Lung adenocarcinoma_LUAD_TCGA-86-7955-01A-11R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MFM-223	COSMIC Cell Line Gene CNV Profiles	1.0	2.15726
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10905
pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.269521
Lower respiratory tract disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.681
Colonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.489
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.074197
Lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.766
Leg	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.839
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A11C-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
carcinoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.686776
Testis	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
SEC14L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69977
AFDN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46391
Colo-201 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.94
PANK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36006
Peptic ulcer disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.689
BEND4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4728
SMAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74006
KCNK5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87224
FM3A cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.784
nuclear lumen	GO Cellular Component Annotations 2025	1.0	null
Ascites	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.282
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.5196
MAEL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87154
gamma-delta T cell receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.917
CHO cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.353
LS-174T cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.072
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20517
Obesity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.455
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.199
Mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.424
non-Hodgkin lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.066
Embryonic kidney cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.7
IM95	CCLE Cell Line Gene Expression Profiles	1.0	2.65491
Colonic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.285
PANC-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.851
WHRN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99069
Colon ascendens	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.581
Muscle tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.241
FERMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45007
Aryl hydrocarbon receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.945
C2C12 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.291
Endometrial cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.471
RAN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50784
carpel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.167655
T-cell lymphoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.528
IRF1	ENCODE Transcription Factor Targets	1.0	null
Substance Abuse Problem	DisGeNET Gene-Disease Associations	1.0	null
SUDHL8	DepMap CRISPR Gene Dependency	1.0	2.17564
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.561
Antropyloric mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.004
MMP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10742
P2RY2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92601
normal	GeneRIF Biological Term Annotations	1.0	null
focal	GeneRIF Biological Term Annotations	1.0	null
ZNF436	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14298
Severe combined immunodeficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.221
YY1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
motility	GeneRIF Biological Term Annotations	1.0	null
CACUL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4523
B-cell chronic lymphocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.602
TCAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45263
TE15	CCLE Cell Line Gene Expression Profiles	1.0	1.38105
SW-48 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.602
Infratentorial cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.059
UBXN10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58143
FLI1::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5232
TMK-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.796
MKN-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.518
DUXA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89598
Cell outer membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.688
GSE240386,GSE242143_8_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-K4-A4AB-01B-12R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Autosomal genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.536
GSE215086_4_v_7_batf_human	RummaGEO Gene Perturbation Signatures	1.0	null
SK-MEL-28 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.469
POLR2A_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.9859
CDK4_knockdown_133_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.24941
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51R-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and neck carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.114
ccd11lu	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.939
Liver hepatocellular carcinoma_LIHC_TCGA-ZS-A9CF-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SLU7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10788
Digestive juice	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.998
Lung squamous cell carcinoma_LUSC_TCGA-98-8020-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CIITA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85308
ADP	HMDB Metabolites of Enzymes	1.0	null
GSE202434,GSE202438_12_v_14_talazoparib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
A-431 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.258
Actinic keratosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.208
Ovary cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.152
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A3VY-01A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PELP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90393
breast fibroadenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.389281
MKN1	CCLE Cell Line Gene Expression Profiles	1.0	2.10142
Vascular endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.648
SOCS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09541
YIPF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6571
EAhy 926 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.501
PNRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19149
YY1_SK-N-SH_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.12233
Peritoneal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.014
ANKRD65	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91072
SEC14L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.06658
MRPL24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92579
Immune system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.012
Multiple Chronic Conditions	DisGeNET Gene-Disease Associations	1.0	null
Tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.133
NCIH727	DepMap CRISPR Gene Dependency	1.0	2.33929
UACC893	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.767715
Carbohydrate metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.647
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.764468
TE-5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.569
CACNA2D2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36247
SW-480 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.453
HEP-3B cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.443
b16f0	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.754
Polyketide synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.188
DHRS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63573
EZH2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Replisome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.586
KASUMI1	DepMap CRISPR Gene Dependency	1.0	2.59063
ATG16L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4651
GTF2F2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44551
Natural killer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.626
NR1D2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8551
Enhanceosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.678
Blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.97
GPR150	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60993
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02429
Neuroblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.884
HT-1080 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.66
Kaposi's sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.157
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051071
TMEM230	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.39134
hindbrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07037
Neuro-2a cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.148
Host cellular component	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.569
nucleoside phosphate binding	GO Molecular Function Annotations 2015	1.0	null
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.8961
AKAP8L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15527
Plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.667
upper (rostral) rhombic lip_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14055
Alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.022
Pronephros	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.535
BT-20 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.893
PPP1R16A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64018
GSE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02416
PLEKHO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92628
ZNF688	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.87239
A-Vietnam-1203_CIP048_RG4-2004(H5N1)NS1trunc_18Hour_None_GSE43204	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.68591
Panc-02 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.807
H3K4me3_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MDA-MB-157	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.407
l132	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.775
Lung adenocarcinoma_LUAD_TCGA-75-6214-01A-41R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.102
Cytotoxic T-lymphocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.71
Myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.243
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.11772
KBTBD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67722
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MR-06A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TMEM147	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32698
RGPD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6701
kinase	GeneRIF Biological Term Annotations	1.0	null
HT1376	CCLE Cell Line Gene Expression Profiles	1.0	1.52211
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.64189
DKKL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93193
CD56+_NKCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.22978
PKD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04834
Amelanotic melanoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.018
E2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.38
Type IV secretion system complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.526
Glucosidase II complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.581
GSE148657_2_v_0_cd44_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15643
alpha-TC1.6 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.587
GSE97352_3_v_2_dasatinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
M1 macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.8
Pancreatic ductal adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.382
WM-115 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.72
PLPP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46097
H1-5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68552
42-MG-BA	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
Ost-alpha/Ost-beta complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.706
HCC44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.69656
Abomasum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.745
Pancreatic ductal carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.069
Cachexia	DisGeNET Gene-Phenotype Associations	1.0	null
Glucose metabolism disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.643
Anus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.955
orbital frontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.61502
M059K	DepMap CRISPR Gene Dependency	1.0	3.44701
SNU-81	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ARFRP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17005
PTK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38169
FAM131B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38967
M1 melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.831
PIGH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60558
cerebellum	HPA Tissue Protein Expression Profiles	-1.0	-1.43178
dorsal thalamus_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.35753
PMC8202205-NIHMS1706275-supplement-Table_S1.xlsx-Mesend_D2_GATA6-dependent-ENSEMBL_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
cerebellum_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02947
Breast cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.651
NB-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.806
cancers	GeneRIF Biological Term Annotations	1.0	null
Adenocarcinoma	DisGeNET Gene-Disease Associations	1.0	null
Kc cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.509
Bhktk	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.92
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058913
skin cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060236
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.058
CTCF	ENCODE Transcription Factor Targets	1.0	null
Kidney Failure, Acute	DisGeNET Gene-Disease Associations	1.0	null
ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2651
P-815 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.36
GSE223893_2_v_10_setd2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Intestinal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.282
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.279011
Colorectal Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.06561
Promyelocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.511
SERPINE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49886
Colon adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.351
Extracellular exosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.153
Herpes simplex	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.141
ASPHD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05433
Skin Cutaneous Melanoma_SKCM_TCGA-FW-A5DY-06A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Myeloma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.745
KIF4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91861
JC cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.493
Sarcoma_SARC_TCGA-DX-A6YZ-01A-12R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ELK1	ENCODE Transcription Factor Targets	1.0	null
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51359
Acute Myeloid Leukemia_LAML_TCGA-AB-2911-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and neck cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.29
Sarcoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.285
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Secondary lysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.4
MAFK	ENCODE Transcription Factor Targets	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KO-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE202434,GSE202438_13_v_11_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Groin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.264
H3K4me3_LNCaP clone FGC_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.591337
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.833197
FAR/SIN/STRIPAK complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.756
precedes	GeneRIF Biological Term Annotations	1.0	null
TMEM127	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.75062
vaginal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.336144
Bone marrow cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.774
hsa-miR-323b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Duodenum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.091
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
primary motor cortex (area M1, area 4)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.1162
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.864684
Ascites tumor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.584
Pancreatic adenocarcinoma_PAAD_TCGA-F2-A7TX-01A-33R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cervical cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.112869
Thoracic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.874
BHK cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.384
RK-13 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.64
COA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04559
CCER2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37313
ALKBH4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09161
YIPF6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26022
Plant embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.901
Umbilical cord cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.631
GSE97352_1_v_2_dasatinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
Integrin alphav-beta3 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.897
Medulloblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.542
BL70	DepMap CRISPR Gene Dependency	1.0	2.41749
Nonparenchymal liver cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.495
M2 macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.82
Brain cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.219
CHEK1_knockdown_136_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.49885
NMS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.238
Larynx	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.279
Interstitial matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.586
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.217
carcinogenesis	GeneRIF Biological Term Annotations	1.0	null
Connective tissue cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.288
MEWO cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.107
RNF44	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71965
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052182
HOS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.855
primary auditory cortex (core)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.24909
Sarcoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.063
TEX13B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.04603
Thigh	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.589
lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.311377
HEK-293FT cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.72
CHRNA10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12798
Reticuloendothelial system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.903
Skin Cutaneous Melanoma_SKCM_TCGA-GF-A4EO-06A-12R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bone marrow-derived macrophage	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.764
Reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.605
hapt1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.694
GSE203485_1_v_0_sunitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7388
GSE48812_3_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	1.0	null
CaSki cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.93
ETV5::HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.1737
H3K4me3_MCF-7_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
INPP5F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93482
CTLL-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.556
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83387
ESS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NF-kappaB p50/p65 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.782
Bone disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.73
bacterial-type flagellum hook	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.811
CXCL6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12063
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5356-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ARL10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76725
HSPA13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32633
SIVA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29925
Bronchioalveolar carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.667
BGC-823 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.39
INSM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63333
SOX8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.94505
GJD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34505
Carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.149
COVID-19	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.138
cytotoxic t-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.351485
Chromosome passenger complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.977
Vitiligo	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.048
Ileocecum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.873
Integrin alphav-beta8 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.929
Pinosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.637
binding	GO Molecular Function Annotations 2015	1.0	null
LONP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35848
BACH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6649
OVKATE	CCLE Cell Line Gene Expression Profiles	-1.0	-2.07988
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-1.38034
Succinate dehydrogenase complex (ubiquinone)	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.713
Regulatory T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.537
Stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.2
T-lymphoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.838
ADRA2C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34595
thyroid gland	HPA Tissue Protein Expression Profiles	1.0	0.906018
IGROV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Retinoblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.6
Bone marrow cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.955
SNX11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78377
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9915
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.833197
microtubule plus-end	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.498231
ONCODG1	CCLE Cell Line Gene CNV Profiles	1.0	1.61169
Neutropenia	DisGeNET Gene-Disease Associations	1.0	null
SkeletalMuscle	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.22051
HNRNPA1L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23944
Alcohol Abuse	DisGeNET Gene-Disease Associations	1.0	null
Gastric cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.803
IkappaB kinase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.245
Cervical adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.592
MCF-7 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.377
GSE216757_0_v_2_decitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
Hepatobiliary system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.469
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05468
Uterine cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.157
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051267
ccd18lu	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.669
oe19	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.923
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.9467
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.979024
OCIP5X	DepMap CRISPR Gene Dependency	1.0	2.11263
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Brain cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.982
Peripheral blood lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.263
Recurrent Tumor	DisGeNET Gene-Phenotype Associations	1.0	null
Adenosine triphosphate	HMDB Metabolites of Enzymes	1.0	null
ADAM19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24819
Acute lymphoblastic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.802
H3K9me3_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCT-116 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.645
Melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	3.023
Lymphatic endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.13
Burkitt lymphoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.347
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.263669
Gingival epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.569
DDX3X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34003
SPAST	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.85933
Childhood Lymphoma	DisGeNET Gene-Disease Associations	1.0	null
ENTPD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46569
Gastric pit	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.733
Membrane coat	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.624
H2AB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.8037
3-methylcrotonyl-CoA carboxylase complex, mitochondrial	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.71
ETV4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.691
GARIN5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33132
CX-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.552
H357	DepMap CRISPR Gene Dependency	1.0	2.05101
MTIF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91069
ZSCAN29	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6866
Capillary disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.13
Ischemia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.26
SRPK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.90611
GOLGA6A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38285
OCIM1	CCLE Cell Line Gene Expression Profiles	1.0	1.70074
TUG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89323
Thioglucosidase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.87
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5273
HTR3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57928
YIPF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95901
Squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.598
Palmitoyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.228
bacterial-type flagellum	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.602
GSE147876,GSE147877_2_v_1_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
ELF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8128
MEK_INHIBITION_GDS5029_279_human_SW480 KRAS-mutant colorectal cancer cell line - 16hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
spleen	HPA Tissue Protein Expression Profiles	-1.0	-1.15659
Osteosarcoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.549
NCI-H292 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.988
P2RX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83389
Primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.706
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
Messa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.62
Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A66S-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW-948 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.811
gonad	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
purine ribonucleoside binding	GO Molecular Function Annotations 2015	1.0	null
HEYA8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39813
Basal cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.425
Gonad	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
female reproductive organ benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.288668
Liver reticuloendothelial system	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.47
Brain glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.149
ZSCAN12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60759
PARP10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68379
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51289
CMT-93 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.048
Plasma membrane raft	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.293
Lung squamous cell carcinoma_LUSC_TCGA-56-7221-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JURKAT cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.613
Pancreatic adenocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.147
POLR3A_01_139	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	4.0
gk1.5	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.14
Pleural disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.177
mediodorsal nucleus of thalamus_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.946279
Lysosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.373
Acute Myeloid Leukemia_LAML_TCGA-AB-2815-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GABBR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50826
SCAMP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01865
Inflammatory bowel disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.196
S100A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42539
RBIS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58344
ETV5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.8953
Cholangiocarcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.509
Malignant ovarian surface epithelial-stromal neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.823
LHX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60777
RNF185	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85169
intracellular part	GO Cellular Component Annotations 2015	1.0	null
CAPAN-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.095
Copper ion transmembrane transporter complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.612
FNTA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32731
ETV2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.1259
GSE85880,GSE85881_0_v_2_tretinoin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HT144	CCLE Cell Line Gene Expression Profiles	-1.0	-1.49524
AIMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2995
MOLT-16	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Berry	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.921
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12165
Glutathione hydrolase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.842
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
induced	GeneRIF Biological Term Annotations	1.0	null
Cytoplasmic vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	2.52
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SLC36A4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47223
NAP1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37781
Female reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.497
TTC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.35869
Corm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.501
CRTC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60389
determines	GeneRIF Biological Term Annotations	1.0	null
PACADD188	DepMap CRISPR Gene Dependency	1.0	4.6324
deacetylase	GeneRIF Biological Term Annotations	1.0	null
Thymoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.069
MAZ	ENCODE Transcription Factor Targets	1.0	null
CA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84846
Breast Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.277227
ING2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35527
Splenocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.544
clonem3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.792
NCIH854	CCLE Cell Line Gene Expression Profiles	-1.0	-1.95409
rectum	HPA Tissue Protein Expression Profiles	1.0	0.906018
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3251
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	3.304
FOXB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49058
LHX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96605
FXR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76124
Parasitic protozoa infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.255
DU-145 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.9
testis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.6181
Ovary	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.093
Breast disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.875
Urease complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.642
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
HT-1376 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.965
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YN-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hematopoietic system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.445
Lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.287
YY1_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Parasitic infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.304
Other source	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.065
Male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.221
Femur	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.624
SNU-C5	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.519