association	dataset	threshold value	standardized value
nasopharynx	HPA Tissue Protein Expression Profiles	1.0	3.27095
T47D	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.901732
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28893
MDAMB231	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.900271
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	140.665
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4774-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50374
UACC812	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.482342
Primary immunodeficiency disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
Sarcoma_SARC_TCGA-SI-A71O-01A-12R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.15
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.2963
RERF-LC-MS	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
Beta defensins	Reactome Pathways 2024	1.0	null
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3417
Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A66S-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Tumor necrosis factor receptor superfamily complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.971
LAN-6	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
six	GeneRIF Biological Term Annotations	1.0	null
bronchus	HPA Tissue Protein Expression Profiles	1.0	1.20662
MDAMB175VII	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.7218
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.40625
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	164.524
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.2924
defense response to Gram-positive bacterium	GO Biological Process Annotations 2025	1.0	null
UBE3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27857
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4968-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1001
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50374
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1075
c16	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.666
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1576
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.3236
COR-L88	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
Acrosomal vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.255
CHAGO-K-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916863
gl1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.849
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.4474
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SNU-C2B	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
CAMA-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8819
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2305
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.4556
HSF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6718
Head and Neck squamous cell carcinoma_HNSC_TCGA-WA-A7GZ-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.898606
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21235
Endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.2232
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56647
rg96	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.371
Cauda epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.168
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.7072
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882919
BL-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.688
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949399
MV-4-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07647
hsa-miR-4301	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882919
Endometritis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.214
Epididymal epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.144
PBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7055
Sperm head	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.985
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0169
20460173-ImmPortAntimicrobials	GeneSigDB Published Gene Signatures	1.0	null
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4973
HINFP	JASPAR Predicted Transcription Factor Targets	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15826
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	73.3717
SW1271	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.1708
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.5191
Heavy chain immunoglobulin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.747
Innate Immune System	Reactome Pathways 2014	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3440-01A-02R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUM52PE	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.533706
defense response to Gram-negative bacterium	GO Biological Process Annotations 2023	1.0	null
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST18-Supplementary_Data_18_Gene_burden_for_deletions_by_subtype_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
SW626	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
HCC2935	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03944
H3K27me3_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64154
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76718
H4 histone acetyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.839
SEC31A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23271
HCC-56	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SN-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Integumentary system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.133
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7939
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.55771
DNASE2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70778
RBM28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13269
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50325
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.07917
Head and Neck squamous cell carcinoma_HNSC_TCGA-CX-7082-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-7848-01A-11R-2132-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60397
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	47.0017
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35003
Female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
HCC3153	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.963893
ZNF85	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1952
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.974
small intestine	HPA Tissue Protein Expression Profiles	1.0	1.20662
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09127
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848591
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.3433
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5231
POLR2A_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Outer dense fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.654
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.9774
gonad	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
HLE	COSMIC Cell Line Gene CNV Profiles	1.0	2.12953
testis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Caput epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.429
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2243
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4983-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Grm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.52
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.6135
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976726
CatSper complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.431
Beta-defensin	InterPro Predicted Protein Domain Annotations	1.0	null
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-Unnamed_47_AR	Rummagene Transcription Factor Associations 2026	1.0	null
PMC3879300-pone.0084292.s002.xlsx-SPD_dataset-Gene_symbol_HOXD13	Rummagene Transcription Factor Associations 2026	1.0	null
defense response to bacterium	GO Biological Process Annotations 2023	1.0	null
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949399
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3752
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-version_2_4_AR	Rummagene Transcription Factor Associations 2026	1.0	null
SNU-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900056
SW 1116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45218
DMS-53	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47349
defense response to Gram-negative bacterium	GO Biological Process Annotations 2025	1.0	null
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.9806
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.68243
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28815
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4734-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDA-MB-157	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58302
WDR75	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22282
Autoimmune disease of musculoskeletal system	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.205
Tassel	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.54
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.69967
cluster	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-1273f	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
defense response to bacterium	GO Biological Process Annotations 2025	1.0	null
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.65926
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6916
proximal	GeneRIF Biological Term Annotations	1.0	null
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31513
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83896
cnv	GeneRIF Biological Term Annotations	1.0	null
PMC11982601-IMM-175-84-s005.xlsx-Fig5D_LPS-Innate_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
HCC1419	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.72245
Ciliary pocket	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.063
number	GeneRIF Biological Term Annotations	1.0	null
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.6588
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.7355
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.8577
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JY-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DAOY	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
SAT	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.4568
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3578
PANC-03-27	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
Endometrial disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.173
Uterine epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.809
Lung squamous cell carcinoma_LUSC_TCGA-85-7697-01A-11R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MDAMB453	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.43025
Peyer's gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.615
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10649
Sperm flagellum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.918
Urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
VENTX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7257
OCUM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0169
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.962895
RFX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9543
RFX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1042
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.99952
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.13487
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	224.966
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fallopian tube	HPA Tissue Protein Expression Profiles	1.0	1.20662
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80719
Cervicovaginal fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.837
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6362
PMC10882188-ADB-29-e13365-s002.xlsx-ST18-Unnamed_8_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H1581	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14133
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.6
Beta defensins	Reactome Pathways 2014	1.0	null
Gingiva	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.035
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
H2461	COSMIC Cell Line Gene CNV Profiles	1.0	2.12953
interleukin-20 receptor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.221
RT4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24408
B-50 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.559
betadefensin	GeneRIF Biological Term Annotations	1.0	null
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
OPM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901103
internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39526
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949399
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.4446
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.703
ME-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0434
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6164
ZR-75-30	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
hsa-miR-412	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
Lung adenocarcinoma_LUAD_TCGA-97-7553-01A-21R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2028
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68423
OCUB-M	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45263
IGR-37	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83468
NCI-H1650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.972744
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hsa-miR-198	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9526
Reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
voltage-gated calcium channel complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.002
PMC11749115-loae020_suppl_Supplementary_Table_S2.xlsx-CHOP-high-gene_DDIT3	Rummagene Transcription Factor Associations 2026	1.0	null
nitric-oxide synthase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.504
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.6152
Myoblastoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.135
Skin disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.141
HCC70	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5048
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869147
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.2076
PE01	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833644
Immune System	Reactome Pathways 2024	1.0	null
Acrosomal membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.673
ARTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01491
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5201-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Smc5-Smc6 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.781
Internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.2176
Dermal dendritic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.675
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.4344
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.81539
MDA-MB-134-VI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.972744
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0257
JEKO-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.12953
Connective tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.053
b63	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.846
RFX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2548
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5314
UKE-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84508
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.3071
NCI-H1793	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.83468
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.4356
IM-95M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58302
copy	GeneRIF Biological Term Annotations	1.0	null
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.263
ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4908
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.25669
Cervical mucus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.275
CAL 54	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.949399
SNRPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3201
Sperm glycocalyx	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.477
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.3662
SUM149PT	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.2039
NR1I2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3356
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.50086
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.69608
Autoimmune disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.11
Recurrent Otitis Media	DisGeNET Gene-Disease Associations	1.0	null
RCH-ACV	COSMIC Cell Line Gene CNV Profiles	1.0	2.12953
OCI-AML5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910324
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3417
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34127
IM-95	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84041
Male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
OLIG3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.4707
NCI-H1869	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
Ciliary pocket collar	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.232
WDR5-24793694-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.7064
ESRRA_01_280	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60482
Gingival epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.579
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.3188
PGR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9851
Crohn's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.109
POLR2A	ENCODE Transcription Factor Targets	1.0	null
SCLC-21H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38228
Male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.267
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	175.211
KMH-2	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
PFEIFFER	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14133
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03994
appendix	HPA Tissue Protein Expression Profiles	1.0	1.20662
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.82019
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58302
Seminoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.586
Gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
Corpus epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.494
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833644
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Immune System	Reactome Pathways 2014	1.0	null
OVMIU	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
WSU-DLCL2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58302
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.2612
b65	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.848
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.36814
Liver hepatocellular carcinoma_LIHC_TCGA-EP-A3RK-01A-11R-A22L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC10274973-media-3.xlsx-ST18-Unnamed_9_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
PMC11544636-CCS3-18-e12047-s001.xlsx-Supplementary_Table_S2-Supplementary_Table_S2_554_differentially_expressed_genes_between_DOX_and_CTR_D0_in_A673pTERshEWS_FLI1_model_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
Nuclear MIS12/MIND complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.775
Nkx2-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.1782
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.8153
SUIT-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869147
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.1092
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935103
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.838464
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4891
Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-8489-01A-31R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3156-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.8686
PMC12179407-MCO2-6-e70261-s004.xlsx-up_TET3-KO_PQ_vs_Cas9_PQ-Unnamed_10_TET3	Rummagene Transcription Factor Associations 2026	1.0	null
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Up_bins-Up_bins_gaining_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56647
ZNF708	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.086
hsa-miR-525-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A3F5-06A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.0803
OUMS-23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.53465
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848591
DDX27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76455
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7177-11A-01R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1781	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.6256
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04237
Testis	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
8505C	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.751
male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Defensins	Reactome Pathways 2014	1.0	null
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.966437
ZNF157	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8526
POU2F1::SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8284
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.08771
Cellular anatomical entity	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
COV413B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.05618
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LL-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
ZFP14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.6823
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4976-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO-704	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22265
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JV-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.7598
PITX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6374
B800-820 antenna complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.604
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.966437
variation	GeneRIF Biological Term Annotations	1.0	null
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32289
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58302
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.5425
JUND	JASPAR Predicted Transcription Factor Targets	1.0	null
Outer acrosomal membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.889
H3K27me3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JHOS-4	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
Musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.012
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.0646
FAM156B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02947
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.2116
Defensins	Reactome Pathways 2024	1.0	null
GATA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7373
Epididymosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.732
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.898148
MSL complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.074
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.9719
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-Unnamed_60_AR	Rummagene Transcription Factor Associations 2026	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.1521
Male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Autoimmune disease of skin and connective tissue	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.438
PL18	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.0
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09127
HS 940.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48323
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.7707
tonsil	HPA Tissue Protein Expression Profiles	1.0	0.785466
KP-1N	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
THP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58302
STAT1	JASPAR Predicted Transcription Factor Targets	1.0	null
HCC12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58302
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39881
MDA-MB-330	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
OLIG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.938
thought	GeneRIF Biological Term Annotations	1.0	null
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.962895
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01556
extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.663342
Retinitis pigmentosa	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.134
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9703
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.838464
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.2256
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2879
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3427-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cortical granule	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.644
antimicrobial	GeneRIF Biological Term Annotations	1.0	null
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.69608
HCC1954	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.68719
Extracellular region	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	5.0
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1697
Uterine epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.006
BICR22	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
defb107	GeneRIF Biological Term Annotations	1.0	null
defb108p	GeneRIF Biological Term Annotations	1.0	null
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15502
MCF12A	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.71628
male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Mastitis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.873
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15927
SLC37A4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82539
ATN-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
ZNF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.3337
NDUFA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01001
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80719
MFM-223	COSMIC Cell Line Gene CNV Profiles	1.0	2.12953
defense response to Gram-positive bacterium	GO Biological Process Annotations 2023	1.0	null
GTPase activator complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.552
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833644
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.36041
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848591
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.2014
20460173-ImmPortComprehensiveListofImmune-RelatedGenes	GeneSigDB Published Gene Signatures	1.0	null
Aleurone layer	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.174
ML-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.61
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.9442
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.251
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	111.163
JHH-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14513
Sperm plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.59
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.5553
OE21	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
Innate Immune System	Reactome Pathways 2024	1.0	null
indels	GeneRIF Biological Term Annotations	1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PMC10274973-media-3.xlsx-ST18-Supplementary_Table_18_476_Bonferroni_significant_results_P_2_67_x_10-6_of_gene_based_association_analyses_H-MAGMA_dlPFC_cortical_neurons_for_sensation_seeking_factor_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.838464
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.7868
Retinitis pigmentosa 11	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.364
hsa-miR-520a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
SUIT-2	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
HS 852.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916863
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.9041
Ar	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.1328
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06554
NCI-H2804	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.966437
Gonad	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8982
KMS-28PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.838464
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.011
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6010-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.2391
CFPAC-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.80439
distal	GeneRIF Biological Term Annotations	1.0	null
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.031
rectum	HPA Tissue Protein Expression Profiles	1.0	1.20662
Psoriasis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.5
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1387
Antimicrobial peptides	Reactome Pathways 2024	1.0	null
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.6681
Prostate adenocarcinoma_PRAD_TCGA-HC-7737-11A-02R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null