association dataset threshold value standardized value primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.09289 GSE65617_2_v_3_aire_mouse RummaGEO Gene Perturbation Signatures -1.0 null JHOS4 CCLE Cell Line Gene CNV Profiles 1.0 1.50407 central part of CEl Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16341 outer SZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.20308 NCI-H2030 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21277 Intestinal juice TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.895 central nuclear group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.39149 H3K27me3_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsal cochlear nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.68581 20460173-ImmPortAntimicrobials GeneSigDB Published Gene Signatures 1.0 null IZ in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.27014 layer II of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.19427 extracellular region GO Cellular Component Annotations 2015 1.0 null Mafg JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 22.6604 EFO-27 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.969425 GATA1_megakaryocyte_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SW 403 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.81183 Immune System Reactome Pathways 2024 1.0 null HCC1493 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.57933 blast cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.071079 LUDLU1 CCLE Cell Line Gene CNV Profiles 1.0 1.81755 primary visual cortex (striate cortex, area V1/17)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.03571 MZ in dorsomedial extrastriate cortex (V2) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.08675 interleukin-4 receptor complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.551 striatum_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.90125 127399 DepMap CRISPR Gene Dependency 1.0 2.21729 posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.940898 Prdm15 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 48.6017 TP53 ChEA Transcription Factor Targets 1.0 null JUND JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.2404 G61 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.38741 ETV2::FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.2299 mediodorsal nucleus of thalamus_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.05612 OVCA 420 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.9233 primary visual cortex (striate cortex, area V1/17)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.13093 CEBPB_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RBBP5 ENCODE Transcription Factor Targets 1.0 null NCI-H520 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.8262 trochlear nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.24909 RCOR3-21632747-MESC-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null H3K27me3_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null CHD1 ENCODE Transcription Factor Targets 1.0 null UACC-812 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01313 testis TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Vdr JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 21.3251 PSN1 CCLE Cell Line Gene CNV Profiles 1.0 1.43829 Foxj3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 62.1373 defense response to Gram-negative bacterium GO Biological Process Annotations 2025 1.0 null IZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.16967 ALEXANDERCELLS CCLE Cell Line Gene CNV Profiles -1.0 -2.10668 H3K27me3_G1E-ER4_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCT116 DepMap CRISPR Gene Dependency 1.0 12.3476 FU97 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.09887 f1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.926 SG in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.00608 GSE158431_5_v_1_pioglitazone_mouse RummaGEO Drug Perturbation Signatures 1.0 null Foxj2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 24.5856 EFM-19 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01464 GSE247764_1_v_2_nell2_mouse RummaGEO Gene Perturbation Signatures -1.0 null OLIG3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.1095 H3K27me3_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_GM06990_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null polysensory temporal cortex (area 22p) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.90752 CP in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.42092 MX-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.8262 stratum radiatum of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.39468 PATU8988T DepMap CRISPR Gene Dependency 1.0 4.8519 Edinger-Westphal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 3.26578 BACH2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 38.5632 KYSE-70 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01464 VZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.16043 female reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null HCC364 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.16654 GSE183271_2_v_3_nicotinamide_mouse RummaGEO Drug Perturbation Signatures 1.0 null SKNSH DepMap CRISPR Gene Dependency 1.0 2.1001 amygdaloid complex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.9076 TOP2B-26459242-MCF-7-HUMAN ChEA Transcription Factor Targets 2022 1.0 null HOXA1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.5807 Internal male genital organ TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 mediodorsal nucleus of thalamus_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.980917 H3K4me3_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null SNU-398 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01313 Irf1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 34.6426 H3K27me3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HOXB5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.0618 RCM-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.90816 red nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.0437 cerebellar cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.44071 HUH-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.66239 hematopoietic cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052402 Disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.011 HCC2302 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01313 HDLM2 CCLE Cell Line Gene CNV Profiles -1.0 -1.41799 facial motor nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.892739 DOK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.845127 FOXA1-25329375-VCAP-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Typhoid fever DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.191 H3K23me2_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null EFM-192A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.908623 Heschl's gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.06932 AU565 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.915984 NCI-H2170 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.9233 ventricular (matrix) zone of pons Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.19908 HCC38 CCLE Cell Line Gene CNV Profiles 1.0 2.52631 COLO 205 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.30556 globose nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.47099 H3K27me3_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null response to external biotic stimulus GO Biological Process Annotations 2015 1.0 null inferior olive, dorsal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.17671 SPI1 ChEA Transcription Factor Targets 1.0 null whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null EZH2_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K27me3_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Innate Immune System Reactome Pathways 2024 1.0 null ZNF410 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.7088 GSE118430_0_v_1_xbp1_mouse RummaGEO Gene Perturbation Signatures -1.0 null male reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null hematopoietic system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.051897 PROP1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.8685 primary visual cortex (striate cortex, area V1/17)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.3796 antimicrobial GeneRIF Biological Term Annotations 1.0 null EZH2_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H322T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.54969 GP5D DepMap CRISPR Gene Dependency 1.0 4.20582 nucleus coeruleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.835277 GA-10 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.972409 inferior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.30076 Disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.064 PSMG3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.2836 JUND ENCODE Transcription Factor Targets 1.0 null H3K4me1_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GSE160817_7_v_6_slamf6_human RummaGEO Gene Perturbation Signatures -1.0 null MDAMB436 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.869176 anterior hypothalamic area, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18747 posterior orbital gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.52753 RPMI-7951 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00487 blood TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052203 medial subdivision of central nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.2524 PCI6A DepMap CRISPR Gene Dependency 1.0 2.35196 NR3C2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.75 Obesity-related traits GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.61549 response to stimulus GO Biological Process Annotations 2015 1.0 null H2AFZ_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null response to external stimulus GO Biological Process Annotations 2015 1.0 null ZR7530 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 2.36851 Epididymis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.412 innate immune response GO Biological Process Annotations 2015 1.0 null GSE183271_1_v_0_nicotinamide_mouse RummaGEO Drug Perturbation Signatures -1.0 null PEO4 DepMap CRISPR Gene Dependency 1.0 2.20237 HESX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.5857 Male reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 HOP62 CCLE Cell Line Gene CNV Profiles 1.0 1.58645 RAD21_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null stratum pyramidale of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.12349 RBBP5_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null BT549 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.12414 VZ in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.950907 erythroid cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.182279 GSE160817_7_v_9_slamf6_human RummaGEO Gene Perturbation Signatures -1.0 null tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SG in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.826658 decreased fasting circulating glucose level MGI Mouse Phenotype Associations 2023 1.0 null response to bacterium GO Biological Process Annotations 2015 1.0 null SMC3 ENCODE Transcription Factor Targets 1.0 null bladder GTEx Tissue Gene Expression Profiles 1.0 0.932408 RUNX2 ChEA Transcription Factor Targets 1.0 null H3K27me3_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CTCF_thymus_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null anterior orbital gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.50118 occipital pole, left, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.86373 primary auditory cortex (core)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.41252 thought GeneRIF Biological Term Annotations 1.0 null CPC-N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.883032 EW1 DepMap CRISPR Gene Dependency 1.0 6.70643 WM983B CCLE Cell Line Gene CNV Profiles 1.0 1.67272 SKMEL3 CCLE Cell Line Gene CNV Profiles 1.0 1.63228 GATA2 ChEA Transcription Factor Targets 1.0 null urogenital system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Sperm plasma membrane COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.605 Cervical mucus TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.621 posteroventral (inferior) parietal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.03522 Urogenital system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 occipital pole, left, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.79748 ES5 DepMap CRISPR Gene Dependency 1.0 5.15372 GSC JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.7467 POLR2AphosphoS5_G1E_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Microphthalmia with limb anomalies DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.016 mRNA_ASCL2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null COLO 699 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.879202 pontine reticular formation, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.63725 IZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.0149 CMK115 CCLE Cell Line Gene CNV Profiles 1.0 1.35543 ventral posterior inferior nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.898125 H3K27me3_G1E_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE247764_3_v_2_nell2_mouse RummaGEO Gene Perturbation Signatures 1.0 null GRANTA519 CCLE Cell Line Gene CNV Profiles -1.0 -1.35543 KYSE-520 COSMIC Cell Line Gene CNV Profiles 1.0 4.51153 Antimicrobial peptides Reactome Pathways 2024 1.0 null GSE113106_2_v_4_dnm2_mouse RummaGEO Gene Perturbation Signatures -1.0 null Foxo3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 16.7739 CAOV4 DepMap CRISPR Gene Dependency 1.0 3.52148 CHAGO-K-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.4242 Innate Immune System Reactome Pathways 2014 1.0 null posterior (caudal) superior temporal cortex (area 22c)_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.996445 SK-MEL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.02997 subcuneiform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.7782 ZR-75-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.00126 CP in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.85325 FOXH1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.1023 VZ in midcingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.853343 NALM6 DepMap CRISPR Gene Dependency 1.0 2.93508 NFKB1-27076634-BEAS2B-HUMAN-LUNG-INFLAMMATION ChEA Transcription Factor Targets 2022 1.0 null Psoriasis 4 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.145 vestibular nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.32295 Seminiferous epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.762 SMC3_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null JUND_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null LYL1 ChEA Transcription Factor Targets 1.0 null 8305C CCLE Cell Line Gene CNV Profiles 1.0 1.44932 HCC38 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.463 midbrain raphe nuclei Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.04781 H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null lateral hypothalamic area, anterior region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.75897 Foxo1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 16.317 VIIIA, right, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.32457 Pancreatic adenocarcinoma_PAAD_TCGA-IB-A6UF-01A-23R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posteroventral (inferior) parietal cortex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.43128 anterior amygdaloid area Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.20781 anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.49174 PL4 DepMap CRISPR Gene Dependency 1.0 4.01136 SOX9 ChEA Transcription Factor Targets 1.0 null CTCF_kidney_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HSF4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.3623 RMUG-S Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.08706 ChIP_RCOR3_21632747 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null JUN JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.9001 GATA1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.985 Reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 T98G Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01313 Preterm premature rupture of the membranes DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.437 mediodorsal nucleus of thalamus_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.927571 SG in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.10057 PLCPRF5 CCLE Cell Line Gene CNV Profiles -1.0 -1.85272 HCC1263 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.972081 anterior (rostral) cingulate (medial prefrontal) cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.969718 ventrolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.869496 Edinger-Westphal nucleus (accessory oculomotor nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.993398 stratum lacunosum-moleculare of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.911836 AR ChEA Transcription Factor Targets 1.0 null Periodontal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.038 cingulate gyrus, retrosplenial part, left, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.825078 cingulate gyrus, retrosplenial part, right, superior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.06224 E2F4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.0523 Endocrine gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 cell part GO Cellular Component Annotations 2015 1.0 null KP1N DepMap CRISPR Gene Dependency 1.0 3.34607 amygdaloid complex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18495 medioventral part of putamen Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.51383 SG in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.02597 dorsolateral prefrontal cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.856901 nucleus subceruleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.883749 cingulum bundle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.56578 primary visual cortex (striate cortex, area V1/17)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.03631 VZ in subcallosal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.944761 H3K4me3_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HOXB9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.9923 RUNX2-22187159-PCA-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Beta defensins Reactome Pathways 2014 1.0 null ABC1 CCLE Cell Line Gene CNV Profiles -1.0 -1.56036 principal sensory nucleus of trigeminal nerve, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.846842 GSE113106_2_v_1_dnm2_mouse RummaGEO Gene Perturbation Signatures -1.0 null H3K27me3_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null central nucleus of inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.871359 H3K27me3_Penis Foreskin Fibroblast Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null NCI-H292 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.4242 internal male genital organ TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Perturb_5526_KO_Crtc1_SRP279598 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 posteroventral (inferior) parietal cortex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.917554 HMY-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.842115 zona incerta, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.04562 dorsal lateral geniculate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.02035 SP in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.840162 TP53-23651856-MEF-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null POLR2AphosphoS5_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null cell surface GO Cellular Component Annotations 2015 1.0 null Gli2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.9751 SPI1-20517297-HL60-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null SHOX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.6925 SG in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.947551 defense response GO Biological Process Annotations 2015 1.0 null CatSper complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.759 primary auditory cortex (core)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.23913 inner SZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03905 SNU-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.15011 RUNX2-22187159-PCA-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null GSE191105_2_v_4_nat1_mouse RummaGEO Gene Perturbation Signatures 1.0 null peripheral portion of GPi Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.953975 Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3777-01A-01R-0864-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.52488 SKBR3 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.0049 SPIC JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.6395 lateral subdivision of area 9 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.43007 HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.6069 PMC10709143-41556_2023_1271_MOESM9_ESM.xls-Up_in_PAX7-Target_name_PAX7 Rummagene Transcription Factor Associations 2026 1.0 null Oral epithelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.713 JL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.972409 BHY CCLE Cell Line Gene CNV Profiles 1.0 1.39495 cervix uteri GTEx Tissue Gene Expression Profiles 1.0 0.900871 periaqueductal gray substance, ventral portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.843354 HT1197 CCLE Cell Line Gene CNV Profiles 1.0 2.20286 HSF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.7001 primary visual cortex (striate cortex, area V1/17)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.03983 NCI-H1734 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.48285 NCI-H1373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.38636 TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null paracentral lobule, anterior part, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.19993 H3K27me3_mononuclear cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1569 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.60741 H3K27me3_megakaryocyte_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null EZH2 ENCODE Transcription Factor Targets 1.0 null CEBPB_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null paracentral lobule, posterior part, left, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.979763 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 ZNF317 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.2255 CAL-148 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.883032 KYSE-520 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.36357 Beta defensins Reactome Pathways 2024 1.0 null rostral migratory stream Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.874478 CTV1DM DepMap CRISPR Gene Dependency 1.0 2.2946 GSE247764_5_v_2_nell2_mouse RummaGEO Gene Perturbation Signatures -1.0 null Ar JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 26.8267 H2AFZ ENCODE Transcription Factor Targets 1.0 null LBX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.8282 MEF2A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 45.977 display GeneRIF Biological Term Annotations 1.0 null NIH:OVCAR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03043 fusiform gyrus, right, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.827403 GRM CCLE Cell Line Gene CNV Profiles 1.0 1.52241 Acute Myeloid Leukemia_LAML_TCGA-AB-3008-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_G1E_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null HCC1599 CCLE Cell Line Gene CNV Profiles -1.0 -3.21049 GATA3-22897851-JUKARTE6-1-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Stat5a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.278 C3A CCLE Cell Line Gene CNV Profiles 1.0 1.35915 defense response to other organism GO Biological Process Annotations 2015 1.0 null BHY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.9233 OLIG2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.6697 GSE183994_1_v_0_scml2_mouse RummaGEO Gene Perturbation Signatures 1.0 null AR-20517297-VCAP-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null NCIH226 CCLE Cell Line Gene CNV Profiles -1.0 -1.38553 mbl2 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.239 Seminal plasma TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.975 SP in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.14664 COLO 680N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01313 anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.04453 SOX10 MotifMap Predicted Transcription Factor Targets 1.0 null Gli1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 20.5428 RT-112 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.969425 MEF2C JASPAR Predicted Human Transcription Factor Targets 2025 1.0 55.5785 primary auditory cortex (core)_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.0855 pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.85904 FOXA1-27270436-CHIP-SEQ-PROSTATE-HUMAN ChEA Transcription Factor Targets 2022 1.0 null primary visual cortex (striate cortex, area V1/17)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.07037 H3K27me3_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null decreased fasting circulating glucose level IMPC Knockout Mouse Phenotypes 1.0 null amygdaloid complex_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.977159 LC1SQSF CCLE Cell Line Gene CNV Profiles -1.0 -1.60469 Caput epididymis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.154 CTCF ENCODE Transcription Factor Targets 1.0 null H3K9me3_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null H3K27me3_G1E_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SEPTIN7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.22873 NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.917142 emboliform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.04309 Leaflet of membrane bilayer COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.673 NCI-H1793 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.02997 MAFK ENCODE Transcription Factor Targets 1.0 null H3K4me3_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null VZ in hypothalamic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.62927 SAP30 ENCODE Transcription Factor Targets 1.0 null SU.86.86 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.849778 Cauda epididymis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.303 mRNA_MYOD1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null layer IIIu of area 35r Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.2735 IZ in posteroinferior (ventral) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.1426 mediodorsal nucleus of thalamus_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.12632 CEBPB_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH650 CCLE Cell Line Gene CNV Profiles -1.0 -1.98859 Principal cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.035 Yy1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 29.2141 FOXL1 JASPAR Predicted Transcription Factor Targets 1.0 null KLE DepMap CRISPR Gene Dependency 1.0 3.69284 NCI-H1648 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.5525 NCI-H510A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.9233 SH10TC DepMap CRISPR Gene Dependency 1.0 3.54273 PMC8192774__F3 PFOCR Pathway Figure Associations 2024 1.0 null response to other organism GO Biological Process Annotations 2015 1.0 null GSE247764_4_v_2_nell2_mouse RummaGEO Gene Perturbation Signatures -1.0 null SNU-668 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.18295 gonad TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null erythroblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.182279 NCIH322 CCLE Cell Line Gene CNV Profiles -1.0 -1.88654 mediodorsal nucleus of thalamus_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.24545 HCT15 DepMap CRISPR Gene Dependency 1.0 10.7016 E2F3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.1064 lateral nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.842898 NCIH929 CCLE Cell Line Gene CNV Profiles -1.0 -1.5752 EZH2_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null amygdaloid complex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.31539 endocrine gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null A-431 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00501 SPI1-20176806-THIOMACROPHAGE-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GR-M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.21934 ETV2::HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.6 SNU16 DepMap CRISPR Gene Dependency 1.0 2.67937 oculomotor nuclear complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.00897 cerebellar cortex_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.24416 SP in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.41485 YAPC Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.942866 dentate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.3069 posterior (caudal) superior temporal cortex (area 22c)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.866984 gracile nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.01478 mRNA_ELF1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null SK-MEL-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31855 whole body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.049909 Tbx6 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.4132 HCC33 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0008 CL11 DepMap CRISPR Gene Dependency 1.0 13.3482 SOX9-25088423-EMBRYONIC GONADS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null H3K27me3_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hippocampus (hippocampal formation)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.910804 H3K9me3_H1 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Testis TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 PANC 08.13 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.71758 H3K9me3_CD34 Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Foxf1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 17.6457 105KC Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21277 NCIH1373 CCLE Cell Line Gene CNV Profiles -1.0 -1.57502 GSE247764_0_v_2_nell2_mouse RummaGEO Gene Perturbation Signatures -1.0 null cochlear nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.53949 ZNF274 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.4607 H3K27me3_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Dux JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 22.3991 NCI-H1435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.915798 Immune System Reactome Pathways 2014 1.0 null PMC7617265-EMS137094-supplement-Supplementary_Tables.xlsx-ST18-gene_ST18 Rummagene Transcription Factor Associations 2026 1.0 null FOXO1::ELF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.8495 reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null AR-20517297-VCAP-HUMAN ChEA Transcription Factor Targets 2022 1.0 null ventrolateral prefrontal cortex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.853757 HCC2157 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.16654 defense response to bacterium GO Biological Process Annotations 2025 1.0 null Perturb_10943_KO_Crtc1_SRP279598 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 3.44456 SNU-216 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.87244 BL5013 (RBM27) NURSA Protein Complexes 1.0 null BT20 CCLE Cell Line Gene CNV Profiles -1.0 -1.49403 IZ in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.69999 NR6A1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.1442 occipital pole, left, lateral aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.59686 Male reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 animal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.049909 KYSE520 CCLE Cell Line Gene CNV Profiles 1.0 1.99224 subgranular zone of caudal dentate gyrus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.00044 Prefoldin complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.626 multiform (lateral) division of MD Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.48409 POU1F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.398 GSE160817_7_v_1_slamf6_human RummaGEO Gene Perturbation Signatures -1.0 null paracentral lobule, posterior part, left, bank of cingulate sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.63121 MDAMB231 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.13873 PHOX2A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.3601 orbital frontal cortex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.29711 cellular_component COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 SPI1-20517297-HL60-HUMAN ChEA Transcription Factor Targets 2022 1.0 null marrow cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.075406 hematopoietic stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.07154 adult stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.06426 LYL1-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null H3K27me3_megakaryocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K9me3_Adipose Derived Mesenchymal Stem Cell Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MTF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.619 Gata3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 24.7606 PMC11982601-IMM-175-84-s005.xlsx-Fig5D_LPS-Innate_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null cerebellar cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.02038 defense response to Gram-negative bacterium GO Biological Process Annotations 2023 1.0 null posterior (caudal) superior temporal cortex (area 22c)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.19522 multi-organism process GO Biological Process Annotations 2015 1.0 null ABC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.935715 III, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.02802 LGE-VZ border region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.08391 MAFK_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null CEBPB ENCODE Transcription Factor Targets 1.0 null HOXD11 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.0117 H3K4me1_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null NCI-H929 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.3208 ZBTB26 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.8838 MZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.51858 H3K4me1_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null P63-20808887-KERATINOCYTES-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Axon initial segment COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.827 SOX15 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.7196 CAPAN1 DepMap CRISPR Gene Dependency 1.0 2.33447 pontine nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.914523 immune system process GO Biological Process Annotations 2015 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.835764 SRF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.0843 ML-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.37187 HCC2998 DepMap CRISPR Gene Dependency 1.0 8.19562 erythrocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.505495 Defensins Reactome Pathways 2024 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.860132 VZ in subgenual cingulate neocortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.33226 CTCF_CH12.LX_mm9_4 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H1838 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.840899 RAC3-21632823-H3396-HUMAN ChEA Transcription Factor Targets 2022 1.0 null HSF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.6162 HCC1569 CCLE Cell Line Gene CNV Profiles 1.0 1.64382 UM-UC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.842115 OS252 DepMap CRISPR Gene Dependency 1.0 4.01898 primary motor cortex (area M1, area 4)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.839311 HNF4G JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.3215 caudal (posterior) extramural migratory stream Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.76362 Whole body TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 primary auditory cortex (core)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.09496 NCI-H2803 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0589 496100329_FWM_probable Alzheimer's disease_TBI_100+_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 18.94 SNU216 CCLE Cell Line Gene CNV Profiles 1.0 2.39868 ZNF35 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.462 PLC/PRF/5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.5525 amygdaloid complex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.85527 HCC1569 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.520658 BHLHE23 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.0614 H3K4me3_G1E-ER4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Logical memory (delayed recall) GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.622185 YMB-1-E Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0008 FOXJ2::ELF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.2308 extracellular region COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 OSC20 DepMap CRISPR Gene Dependency 1.0 7.37721 U2904 DepMap CRISPR Gene Dependency 1.0 3.62092 H3K27me3_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SCC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.4242 HUPT4 DepMap CRISPR Gene Dependency 1.0 2.73457 EZH2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4962-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null YMB-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0008 RH18 CCLE Cell Line Gene CNV Profiles 1.0 1.36954 defense response to Gram-positive bacterium GO Biological Process Annotations 2023 1.0 null inner SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.206 SU-DHL-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.22123 H322T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.54969 HOP-62 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.08282 lateral ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.2004 20460173-ImmPortComprehensiveListofImmune-RelatedGenes GeneSigDB Published Gene Signatures 1.0 null SNU1076 CCLE Cell Line Gene CNV Profiles 1.0 2.83115 hippocampus (hippocampal formation)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.22099 BXPC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.57165 IRF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 44.0 planum polare, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.832351 amygdaloid complex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.71878 MDAMB415 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.55426 HCC1319 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01313 COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0589 primary auditory cortex (core)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.05186 layer VI of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 3.34509 DMRTC2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.3784 HT-1376 COSMIC Cell Line Gene Mutation Profiles 1.0 null HOXC10 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.8643 PDCD11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.36035 trochlear nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.30638 COLO 206F Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.928009 anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.836687 immune response GO Biological Process Annotations 2015 1.0 null KNS-62 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.5731 IZ in posteror frontal cortex (motor cortex) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.14013 Mouth disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.05 cellular_component GO Cellular Component Annotations 2015 1.0 null Pou5f1::Sox2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 24.095 emboliform nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.19032 Acute diarrhea DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.61 Planktonic cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.597 NCI-H1915 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.16194 orbital frontal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.23913 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5000-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC12356745-12015_2025_10896_MOESM2_ESM.pdf-401-ZNF329_ZNF329 Rummagene Transcription Factor Associations 2026 1.0 null GSE128240_0_v_1_cyclophosphamide_mouse RummaGEO Drug Perturbation Signatures 1.0 null LMX1B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.5846 GATA2-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null HS578T Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.888144 PMC3348545-NIHMS263168-supplement-3.pdf-3-PBX2_PBX2 Rummagene Transcription Factor Associations 2026 1.0 null Msgn1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 33.4576 Beta-defensin InterPro Predicted Protein Domain Annotations 1.0 null FOXC1 JASPAR Predicted Transcription Factor Targets 1.0 null JHH-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.917142 HCC1428 CCLE Cell Line Gene CNV Profiles -1.0 -2.59447 NCIH292 CCLE Cell Line Gene CNV Profiles -1.0 -1.57753 DPRX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.7758 anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.89801 MCF12A Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.784596 PMC10709143-41556_2023_1271_MOESM10_ESM.xls-Up_hPSC_PAX7-Target_name_PAX7 Rummagene Transcription Factor Associations 2026 1.0 null H3K9me3_H1 Derived Mesenchymal Stem Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null SIX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.6318 cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null H3K27me3_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null A-498 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0008 primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.97966 occipital neocortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.13093 Female reproductive system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 posteroventral (inferior) parietal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.860271 SUM 229PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.68328 Atopic dermatitis 2 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.882 MEF2B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.8315 male infertility IMPC Knockout Mouse Phenotypes 1.0 null defense response to Gram-positive bacterium GO Biological Process Annotations 2025 1.0 null CEBPA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.7825 SG in rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.59146 caudal portion of VFC (area 44) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.34031 Epididymal fluid TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.811 gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null mediodorsal nucleus of thalamus_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.31539 RCOR3 ChEA Transcription Factor Targets 1.0 null male infertility MGI Mouse Phenotype Associations 2023 1.0 null rostral division of VL Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.870164 CHAGOK1 CCLE Cell Line Gene CNV Profiles -1.0 -1.53355 RAD21 ENCODE Transcription Factor Targets 1.0 null normoblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.182279 PMC12356745-12015_2025_10896_MOESM2_ESM.pdf-850-ENSG00000181894_ZNF329 Rummagene Transcription Factor Associations 2026 1.0 null NCI-H441 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.93223 UPCISCC152 DepMap CRISPR Gene Dependency 1.0 2.54633 biological_process GO Biological Process Annotations 2015 1.0 null posterior (caudal) superior temporal cortex (area 22c)_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.09601 SKBR3 CCLE Cell Line Gene CNV Profiles 1.0 1.34056 PMC11749115-loae020_suppl_Supplementary_Table_S2.xlsx-CHOP-high-gene_DDIT3 Rummagene Transcription Factor Associations 2026 1.0 null NCIH520 CCLE Cell Line Gene CNV Profiles -1.0 -1.78653 MG-63 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.908623 SU-DHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0589 inner SZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.867769 NCIH2291 CCLE Cell Line Gene CNV Profiles -1.0 -2.19805 rostral ventral respiratory cell group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.21903 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JF-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SUM1315MO2 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.719771 Periodontitis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.105 Renal epithelium cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.11 GSE183994_3_v_0_scml2_mouse RummaGEO Gene Perturbation Signatures 1.0 null lateral tuberal nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.19524 response to biotic stimulus GO Biological Process Annotations 2015 1.0 null BICR78 DepMap CRISPR Gene Dependency 1.0 2.24455 VMRCRCW CCLE Cell Line Gene CNV Profiles -1.0 -1.78446 female reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null stratum pyramidale of rostral CA2 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.96352 extracellular region LOCATE Predicted Protein Localization Annotations 1.0 null PANC0813 CCLE Cell Line Gene CNV Profiles -1.0 -1.66454 Defensins Reactome Pathways 2014 1.0 null Dandy-Walker syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.317 DMS454 CCLE Cell Line Gene CNV Profiles 1.0 1.94052 HCC4006 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.915798 A549 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.842115 HOXC11 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.4756 POLR2AphosphoS5_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE152637_1_v_0_imiquimod_mouse RummaGEO Drug Perturbation Signatures 1.0 null central gray of the pons, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.972091 hippocampus (hippocampal formation)_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.4763 lateral intermediate part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.13129 U937 CCLE Cell Line Gene CNV Profiles 1.0 1.56518 tissues, cell types and enzyme sources TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.049886 NCIH854 CCLE Cell Line Gene CNV Profiles 1.0 1.86016 defense response to bacterium GO Biological Process Annotations 2015 1.0 null VZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.49511 OLIG1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.1577 SG in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.68133 Epididymal epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.308 cerebellar cortex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.4963 CHD1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Atoh1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 29.8225 POU6F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.0542 SNU1033 CCLE Cell Line Gene CNV Profiles 1.0 1.52492 BT-20 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.71758 NR1I3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.4238 hippocampus (hippocampal formation)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.67532 Alx1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 17.5095 CREB1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.5638 H3K27me3_G1E_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4976-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null defense response to bacterium GO Biological Process Annotations 2023 1.0 null Collagen trimer COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.616 amygdaloid complex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.57016 superior frontal gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.76845 outer SZ in dorsomedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.57907 ZSCAN4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 44.9973 POU4F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.0346 SUM 149PT Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.78792 NO11 DepMap CRISPR Gene Dependency 1.0 5.33257 ME-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.16194 GATA1::TAL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.3447 inferolateral temporal cortex (area TEv, area 20)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.16218 gracile nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.09883 DUX4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.326 primary visual cortex (striate cortex, area V1/17)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.21154 paracentral lobule, anterior part, left, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.939918 transverse gyri, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.981395 inferolateral temporal cortex (area TEv, area 20)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.19452 EZH2_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HNF3A MotifMap Predicted Transcription Factor Targets 1.0 null HCC1500 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.879202 ARGFX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.5229 Hypomyelinating leukodystrophy 2 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.452 Hemochromatosis type 2 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.071 NCI-H1975 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.842115 OSRC2 CCLE Cell Line Gene CNV Profiles 1.0 1.50307 precommissural nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.22274 Logical memory (immediate recall) GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.552288 TP63 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.9664 dorsolateral prefrontal cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.948072 SW1990 DepMap CRISPR Gene Dependency 1.0 3.33126 ERF::SREBF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.7062 SAP30_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1500 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -2.17543 tail of caudate Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.52561 posteroventral (inferior) parietal cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.26398 SG in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.11183 JUN::JUNB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.597 SIX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.3761 THRA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.6538 dorsolateral prefrontal cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.55851 COLO-783 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.842115 SNU-C2B COSMIC Cell Line Gene Mutation Profiles 1.0 null dorsolateral prefrontal cortex_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.12151 H3K9me3_A549_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ZNF680 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.825 H3K9me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null HUP-T4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0589 choroid plexus of the fourth ventricle Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.2043 response to stress GO Biological Process Annotations 2015 1.0 null ventral tegmental area, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.935122 Gonad TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 HOXD12 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.8594 IZ in frontal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.954726 MGA::EVX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.4231 LMX1A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.1811 H3K27me3_CH12.LX_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null male reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null U-937 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.28589 H3K27me3_Brain Inferior Temporal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KR-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null subcallosal cingulate gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.914055 IZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.990052 ZNF184 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.2407 Secondary spermatocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.602 anterior (rostral) cingulate (medial prefrontal) cortex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.75053 EVSAT DepMap CRISPR Gene Dependency 1.0 3.54069 GRANTA-519 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.29844 superior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.4486 SP in ventrolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.828411 SUDHL8 CCLE Cell Line Gene CNV Profiles 1.0 2.00633 GSE130690,GSE130692_1_v_0_sirt6_mouse RummaGEO Gene Perturbation Signatures 1.0 null MMAC-SF COSMIC Cell Line Gene Mutation Profiles 1.0 null NOL11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 5.9248 central gray of the pons, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.08673 Stat2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 61.8684 mRNA_SMAD4_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null mRNA_CDX2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null CCK81 CCLE Cell Line Gene CNV Profiles -1.0 -1.47683 Female reproductive gland TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 precentral gyrus, right, bank of the precentral sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.19168 NCIH441 CCLE Cell Line Gene CNV Profiles -1.0 -2.11116 NR3C1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.1319 spinal trigeminal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.11143 X, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.85415 RK-13 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.121 MEF2D JASPAR Predicted Human Transcription Factor Targets 2025 1.0 46.111 primary somatosensory cortex (area S1, areas 3,1,2)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.928589 posterior (caudal) superior temporal cortex (area 22c)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.19117 SNU761 DepMap CRISPR Gene Dependency 1.0 3.89859 Perturb_17304_KO_Tug1_SRP176442 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.61113 H3K9me3_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null orbital frontal cortex_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.13615 Male infertility DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.211 NCI-H522 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.863646 amygdaloid complex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.977159 LS1034 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.60741 hippocampus (hippocampal formation)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.894738 G96 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.849301 SNU324 CCLE Cell Line Gene CNV Profiles -1.0 -1.59928 H3K27me3_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pyrazinamide_mus musculus_gpl6246_gse48027 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null amygdaloid complex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.03019 GATA1 ENCODE Transcription Factor Targets 1.0 null myeloid progenitor cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.074774 striatum_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.921027 H3K27me3_megakaryocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null corpus callosum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.02398 H3K4me1_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ATF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.2847 pontobulbar body Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.997791 NCI-H345 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.10909 inner CP in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.998269 stratum lacunosum-moleculare of caudal CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.18336 SKM-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.16612 encoded GeneRIF Biological Term Annotations 1.0 null EZH2_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abducens nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.40502 184A1N4 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.902744 PMC4162954-12864_2014_6430_MOESM3_ESM.xlsx-2102Ep-Genes_deregulated_in_2102Ep_cells_after_SOX2_knock-down_FDR-corrected_P-value_0_05_SOX2 Rummagene Transcription Factor Associations 2026 1.0 null SUIT2 CCLE Cell Line Gene CNV Profiles -1.0 -1.37811 indusium griseum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.12929 medial habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.0704 NCI-H1869 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25586 NCI-H1666 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.908623