association	dataset	threshold value	standardized value
NCI-H292	GDSC Cell Line Gene Expression Profiles	-1.0	-2.31416
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13782
Lung adenocarcinoma_LUAD_TCGA-69-8253-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-J2-A4AD-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4641-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4352-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-QK-A6II-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
gliclazide-2870	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hydroquinine-2767	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
imatinib_homo sapiens_gpl96_gds3043	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K92725027	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26057
Lung squamous cell carcinoma_LUSC_TCGA-34-5928-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tolnaftate-1501	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
eGFP-NR4A1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sulfachlorpyridazine-2191	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
sulfadoxine-5852	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.3917
troleandomycin-1965	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCIH3255	CCLE Cell Line Gene Expression Profiles	1.0	1.67842
Lung squamous cell carcinoma_LUSC_TCGA-98-A539-01A-31R-A262-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RPS14_DN.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.829326
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.830246
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.51294
MKN74	CCLE Cell Line Gene CNV Profiles	1.0	1.49371
etofylline-2093	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K36me3_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K30220159	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.75653
Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T5-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
valinomycin-5911	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
butirosin-666	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
chlorprothixene-1272	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
indoprofen-3345	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K87158974	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.52251
BRD-K86923998	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23397
Lung squamous cell carcinoma_LUSC_TCGA-56-7221-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7616-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K32949071	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.92296
probenecid-2825	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K08442552	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41773
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.56767
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20898
LN-229	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03119
celecoxib-206	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
penbutolol-2972	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7J9-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K35122752	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11137
H3K9ac_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H1975	GDSC Cell Line Gene Expression Profiles	-1.0	-1.63438
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.39967
Lung adenocarcinoma_LUAD_TCGA-44-8120-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PTEN_DN.V2	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
KMS-21BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35143
PHA-00745360-4562	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
N-acetylmuramic acid-4582	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
L-methionine sulfoximine-2831	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
triamcinolone-5835	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CHD1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PHF8	ENCODE Transcription Factor Targets	1.0	null
SW1271	CCLE Cell Line Gene Expression Profiles	-1.0	-1.46254
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.27875
KATOIII	CCLE Cell Line Gene Expression Profiles	1.0	1.89363
tanespimycin-1044	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K47471281	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.86416
sulmazole-2153	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
suxibuzone-7163	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
fludroxycortide-7378	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
chloroquine-7012	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ticlopidine-1975	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEx Thyroid 20-29 vs 50-59	GTEx Tissue-Specific Aging Signatures	1.0	4.49129
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6176
proadifen-5807	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
chloramphenicol-5047	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27104
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HK-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCOR1	ENCODE Transcription Factor Targets	1.0	null
enilconazole-6518	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942302
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.04287
trimethobenzamide-2002	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K03262163	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35039
Pancreatic adenocarcinoma_PAAD_TCGA-XN-A8T5-01A-12R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Y-27632-948	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Prostate adenocarcinoma_PRAD_TCGA-G9-6339-01A-12R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.1361
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45X-01A-21R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K74452256	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15769
G118	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.04144
hydroxyprogesterone	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.91554
JHOM2B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.66893
quercetin-2499	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-S4-A8RO-01A-12R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-M45350951	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60423
(+/-)-catechin-4837	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
KDM1A	ENCODE Transcription Factor Targets	1.0	null
Lung adenocarcinoma_LUAD_TCGA-69-7765-01A-11R-2170-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K98704738	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.63811
NCOR1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.07682
Lung adenocarcinoma_LUAD_TCGA-62-A46R-01A-11R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
haloperidol-1539	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A09975616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.92458
K562	BioGPS Cell Line Gene Expression Profiles	1.0	1.54712
BRD-K76518272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.59091
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3123
tribenoside-3507	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
gabapentin-5875	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RERFLCKJ	CCLE Cell Line Gene CNV Profiles	1.0	1.59302
droperidol-1290	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BJAB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54365
BRD-K94881465	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08873
BRD-K92140823	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.57561
BRD-K75426080	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13234
JHESOAD1	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A11D-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5400-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2916-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6952-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH2172	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50836
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04378
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A94Y-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW837	CCLE Cell Line Gene CNV Profiles	1.0	1.7004
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824751
HL60	CCLE Cell Line Gene Expression Profiles	1.0	1.87138
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.83754
SNU410	CCLE Cell Line Gene CNV Profiles	1.0	1.45734
BRD-A07870296	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59443
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3QH-01A-11R-A220-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54243
BRD-K10105458	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.93292
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H4-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
resveratrol-5509	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K36me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cefotaxime-5830	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K45936761	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08179
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4771-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mephentermine-2563	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MU-A51Y-01A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.830246
BRD-K83190598	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20607
Bladder Urothelial Carcinoma_BLCA_TCGA-PQ-A6FN-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-2Z-A9J3-01A-12R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DorsalRootGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.2435
sertaconazole-6811	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
sulfacetamide-1695	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC827GR5	CCLE Cell Line Gene Expression Profiles	-1.0	-1.57753
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824751
mefenamic acid-1699	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824751
IKBKG	MSigDB Cancer Gene Co-expression Modules	1.0	null
ketoconazole-1285	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
rolipram-3072	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tobramycin-2841	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K15098674	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34776
H3K23me2_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-V1-A8ML-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A3Y4-01A-51R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K88369626	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.09877
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4742-01A-02R-1514-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
racecadotril-2774	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
colchicine-644	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.94335
Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-5334-01A-01R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dequalinium chloride-5396	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ethambutol-1481	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SU-DHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.29592
antazoline-6775	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890104
nadolol-4021	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890104
DMS53	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78888
Sarcoma_SARC_TCGA-WK-A8XO-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mometasone-5541	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
trifluoperazine-910	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.987013
isoxicam-7028	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.948809
SNB19	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.26699
Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-A4TM-01A-11R-A31O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fulvestrant-1630	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SBC-1	GDSC Cell Line Gene Expression Profiles	-1.0	-2.13675
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.02162
PHF8_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JE-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
glipizide-2008	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H838	GDSC Cell Line Gene Expression Profiles	-1.0	-2.14496
HPAC	CCLE Cell Line Gene Expression Profiles	1.0	1.67482
BHT-101	GDSC Cell Line Gene Expression Profiles	-1.0	-1.58256
Acute Myeloid Leukemia_LAML_TCGA-AB-2872-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
bufexamac-2382	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
sirolimus-1242	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
COLO-818	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.05604
etodolac-2254	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
acemetacin-6361	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K66729666	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51911
BRD-K50985475	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15075
G84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.59166
BRD-K39449566	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25215
Sarcoma_SARC_TCGA-DX-AB2X-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K04291521	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0362
quercetin-2859	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCT15	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.31456
Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-7069-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4
H3K36me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K11846531	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44262
ceftazidime-1721	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K56664261	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26236
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.903846
786-O	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.855511
CHP-134	GDSC Cell Line Gene Expression Profiles	1.0	1.60426
aklomide	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61306
BRD-K15259298	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05055
estradiol-1149	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
etodolac-7006	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
F5	CCLE Cell Line Gene Expression Profiles	-1.0	-1.75987
KMS-28PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27565
NCIH1437	CCLE Cell Line Gene Expression Profiles	-1.0	-2.20513
decamethonium bromide-7353	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
calcium pantothenate-4189	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HT29	BioGPS Cell Line Gene Expression Profiles	1.0	1.27721
flunisolide-4303	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hesperetin-6750	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hexamethonium bromide-4965	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H82	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.01726
BRD-K98216700	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44439
bepridil-1274	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
harpagoside-6636	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K27ac_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BRD-K84220215	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16386
diphenhydramine-1708	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.04075
BRD-K56332068	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15692
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4819-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K59772014	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.025
tacrolimus-284	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43728
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864798
gibberellic acid-4818	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.03912
sodium phenylbutyrate-502	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K79697020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46127
BRD-K67141726	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25271
BRD-K25583354	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12695
Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U7-06A-21R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-QH-A65R-01A-21R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CEBPB_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
iproniazid-2125	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
zaprinast-5349	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UACC812	CCLE Cell Line Gene Expression Profiles	1.0	1.35704
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.907203
clozapine-1289	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
WM793	CCLE Cell Line Gene Expression Profiles	1.0	1.68128
DMS53	CCLE Cell Line Gene Expression Profiles	-1.0	-2.13081
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3450-01A-02R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-78-8662-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K19668893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00405
tolnaftate-2001	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4876-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hexamethonium bromide-1482	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CAL-39	GDSC Cell Line Gene Expression Profiles	1.0	1.6303
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.846895
DOK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.29857
BRD-K75807957	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0126
cefoxitin-2735	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.903846
Lung squamous cell carcinoma_LUSC_TCGA-85-A4QR-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SQ1	CCLE Cell Line Gene Expression Profiles	1.0	1.61644
famprofazone-4309	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K77540020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16903
BRD-K47063692	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07464
KMS-12-BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13782
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.879556
colistin-2851	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
zidovudine-5333	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IGROV-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.41182
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5VU-01A-21R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
etidronic acid-4564	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
sulfaguanidine-1995	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K23960050	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58376
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.903846
BRD-K51454545	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18353
EZH2_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K91239327	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20036
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45013
BRD-K10288935	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.00609
delsoline-5858	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-ER-A3ET-06A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RPMI8226	CCLE Cell Line Gene CNV Profiles	-1.0	-2.37823
salsolidin-2824	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K27ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
fulvestrant-1663	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
flecainide-3418	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.03145
arachidonyltrifluoromethane-327	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CHD1	ENCODE Transcription Factor Targets	1.0	null
Sarcoma_SARC_TCGA-HB-A2OT-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-56-1622-01A-01R-0692-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-7301-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02489
SB-203580-6894	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K98757606	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.03909
Gly-His-Lys-6575	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
articaine-7272	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
etamivan-7021	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PTPN9	MSigDB Cancer Gene Co-expression Modules	1.0	null
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.77775
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-A44B-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
monorden-484	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.17766
CiliaryGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.967526
Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KT-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dicloxacillin-5012	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
rottlerin-825	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pramocaine-3811	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
BRD-K74245698	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30024
BRD-K76437403	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35776
BRD-K88543505	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23976
cefalexin-2628	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K22039769	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.313
BRD-K49664555	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20355
H3K36me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A3HR-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K03884263	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01405
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	1.0	2.41625
pioglitazone-6898	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CEBPB_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
resveratrol-595	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.837643
meprylcaine-6204	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
plicamycin_homo sapiens_gpl570_gse25127	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56096
pyridoxine-2751	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A33119430	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41482
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H1-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K43316594	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.60638
Brain Lower Grade Glioma_LGG_TCGA-TM-A84J-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
homochlorcyclizine-7295	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
nitrofurantoin-3674	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-8634-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K18416855	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.58517
Lung adenocarcinoma_LUAD_TCGA-97-8171-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cytisine-5739	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K61144709	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01551
vinblastine-7517	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K86004174	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18075
thioperamide-4675	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
A101D	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
EZH2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K34445019	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.89213
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.19472
NS-398-6897	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
gentamicin-2082	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
homosalate-3797	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
vidarabine-3445	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K79370456	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09072
rosiglitazone-6950	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A19766589	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25235
TE1	CCLE Cell Line Gene CNV Profiles	1.0	2.01306
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.26597
valproic acid-6974	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CP-645525-01-7515	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CAL-33	GDSC Cell Line Gene Expression Profiles	1.0	1.72713
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11643
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4881-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.955295
CNTN1	MSigDB Cancer Gene Co-expression Modules	1.0	null
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.14647
clozapine-4670	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tanespimycin-1650	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LY-294002-401	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K33865795	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.7119
Lung adenocarcinoma_LUAD_TCGA-69-7974-01A-11R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
metanephrine-6734	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K92359570	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26478
H3K36me3_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HT29	CCLE Cell Line Gene Expression Profiles	1.0	1.91712
721_B_lymphoblasts	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.60625
clozapine-6188	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tretinoin_homo sapiens_gpl6244_gds4180	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
famotidine-2029	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IC-86621-7513	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
16-phenyltetranorprostaglandin E2-7505	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tetraethylenepentamine-406	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K36me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPB_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ticarcillin-7185	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4174-01A-02R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K61092554	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10473
Prostate adenocarcinoma_PRAD_TCGA-HC-A4ZV-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LTK	MSigDB Cancer Gene Co-expression Modules	1.0	null
trimethadione-2846	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
alpha-ergocryptine-2572	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
KMS-28PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.91979
BRD-K56339035	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34954
BRD-K55623459	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25638
BRD-K34595193	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.39365
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4892-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
midodrine-7156	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K68470956	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49362
BRD-K15042749	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08246
Prestwick-972-7266	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.870603
BRD-K10196668	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21417
ALL-PO	GDSC Cell Line Gene Expression Profiles	1.0	1.9667
RNF2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K93601851	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.36476
Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9IC-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-97-8175-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9ac_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
tetraethylenepentamine-498	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K11823863	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26412
SA-1919248	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03131
Skin Cutaneous Melanoma_SKCM_TCGA-GN-A265-06A-21R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH1435	CCLE Cell Line Gene CNV Profiles	1.0	1.77978
levocabastine-7009	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LN215	CCLE Cell Line Gene Expression Profiles	-1.0	-3.31307
CASP2	MSigDB Cancer Gene Co-expression Modules	1.0	null
prednisone-4577	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Sarcoma_SARC_TCGA-QQ-A8VH-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51T-06A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fasudil-343	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K04238122	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38597
betulin-2952	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TE1	CCLE Cell Line Gene Expression Profiles	1.0	1.43737
NCI-H2196	GDSC Cell Line Gene Expression Profiles	-1.0	-1.43657
triprolidine-7408	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7915-01A-11R-2204-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
corynanthine-4811	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
valproic acid-6929	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K50300854	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01734
Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-A633-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cefadroxil-3259	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A5BV-01A-11R-A26T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H-89-6873	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
diflunisal-1490	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
haloperidol-492	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A59V-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TQ-A8XE-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
trichostatin A-2035	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
carbamazepine-1805	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2954-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
conessine-2135	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
trimethobenzamide-1920	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cinchonine-3988	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.07682
BRD-K64299311	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3644
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.40528
TGFB_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	1.0	null
deferoxamine-4317	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.830246
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DR-A0ZM-01A-12R-A10U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K02675272	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41491
DEL	GDSC Cell Line Gene Expression Profiles	1.0	1.50894
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-4859-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fluocinonide-3757	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K57879743	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28637
sulfadimidine-3765	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cefalexin-1273	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
serotonin-5268	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.1078
urapidil-5295	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
COV644	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.13455
prochlorperazine-1640	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JA-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
oxetacaine-1984	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-XF-A8HE-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
metoprolol-6106	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K67042874	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21913
BRD-K33986892	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11652
BRD-K23762204	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29725
aconitine-6797	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DAOY	CCLE Cell Line Gene Expression Profiles	-1.0	-1.97941
BRD-K45282766	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1454
Lung squamous cell carcinoma_LUSC_TCGA-39-5037-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EM2	CCLE Cell Line Gene Expression Profiles	1.0	1.69091
Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A51X-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
methoxamine-2848	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Rectum adenocarcinoma_READ_TCGA-CI-6621-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
propoxycaine-7155	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4989-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dimethadione-3367	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K25064302	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40948
carbamazepine-5518	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K55584718	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.70341
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.829326
BRD-K46428124	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18228
sirolimus-1148	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
nefopam-2355	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
Lung adenocarcinoma_LUAD_TCGA-44-3396-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AR-A014418-7092	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
wortmannin-404	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
cefapirin-6790	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Skin	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.932519
BRD-K38131403	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10907
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04484
BRD-K77892726	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.0674
amiprilose-4000	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SkeletalMuscle	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.33544
BRD-K99100679	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.7044
hydrastinine-5075	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.987013
H3K36me3_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A172	BioGPS Cell Line Gene Expression Profiles	-1.0	-2.08136
clopidol	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25631
colchicine-3213	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.887505
BRD-K01077691	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1858
SOX2-20726797-SW620-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-US-A774-01A-21R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
minocycline-1135	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
captopril-4410	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-60-2707-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pimethixene-7468	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
primidone-3065	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
AG-028671-6582	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K74767736	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.47055
BRD-K90049800	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60322
BRD-K57115335	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.0645
BRD-K15008902	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.22028
triamterene-1861	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K32037893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14308
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35143
valproic acid-6934	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SUIT-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.894258
Sarcoma_SARC_TCGA-MJ-A68H-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sulfapyridine-2538	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
flecainide-3761	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MFE-296	GDSC Cell Line Gene Expression Profiles	1.0	1.5941
BRD-K45683404	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04376
POLR2A_MCF-7_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dobutamine-3206	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H4K20me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Appendix	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.847568
monastrol-681	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LNCAP	BioGPS Cell Line Gene Expression Profiles	1.0	0.908808
H3K36me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43728
BRD-K66327237	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08408
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.843973
fluphenazine-1178	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LY-294002-5213	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pivmecillinam-2973	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TGW	GDSC Cell Line Gene Expression Profiles	1.0	1.70903
SNU478	CCLE Cell Line Gene CNV Profiles	1.0	1.53904
gata3_21892208_mda_mb_231_gof_human_gpl570_gds4080	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.103087
Lung adenocarcinoma_LUAD_TCGA-55-6986-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cortisone-7416	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FF-A7CW-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ethoxyquin-3421	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FR-A69P-06A-21R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10047
BAS-012416453-6908	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hsf1_17216044_hela_lof_human_gpl571_gds1733	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.331924
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MA-AA3Y-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K84478344	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.85736
BRD-K24047785	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15815
doxylamine-1973	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
oxamniquine-7344	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.949919
HOP92	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.909689
CGTHW1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.6026
haloperidol-6163	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K36me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
K-562	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
BRD-K88290000	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.84645
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68808
BRD-K02953825	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.95621
tetraethylenepentamine-412	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K27me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K36me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-8511-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
flurbiprofen-5269	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
arachidonic acid-443	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
lisinopril-5504	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K62018188	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42469
BRD-K96493283	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.6394
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.35652
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27628
Skin Cutaneous Melanoma_SKCM_TCGA-HR-A5NC-01A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H4K20me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.03213
SuperiorCervicalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.87187
Adrenocortical carcinoma_ACC_TCGA-OR-A5LB-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K43240808	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.55879
ketoconazole-2640	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.43084
nabumetone-5428	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
epirizole-1803	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4638-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 895.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.27718
BRD-A54490075	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10695
metoprolol-6846	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
butoconazole-3288	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10088
OUMS23	CCLE Cell Line Gene Expression Profiles	-1.0	-1.71514
diclazuril	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22045
Acute Myeloid Leukemia_LAML_TCGA-AB-2848-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5096-01A-01R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K12312755	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14702
BRD-K47001624	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47229
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.05248
BRD-K63401195	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08248
oxetacaine-4829	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-5555-01A-01R-1514-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K49039223	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.19402
H3K36me3_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
dexamethasone-374	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
chlortetracycline-1541	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-60-2703-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.922817
H3K36me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
butein-582	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
0316684-0000-7057	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
paromomycin-3356	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCaRG_OE_GDS1411_72_human_HEK293 embryonal kidney cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Sarcoma_SARC_TCGA-DX-AB2P-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 294T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.26597
Prostate adenocarcinoma_PRAD_TCGA-KK-A6E7-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KMS28BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50212
dizocilpine-1386	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A97198094	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15366
hexestrol-5776	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
sulpiride-1467	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ifenprodil-2372	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11312
BRD-A12822115	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04763
lisuride-2046	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K83603369	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07858
BRD-K21143905	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.78262
BRD-A43330902	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.83424
BRD-K32423836	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23118
sulfanitran	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36075
CHD4	ENCODE Transcription Factor Targets	1.0	null
benzamil-3635	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K38081867	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.56315
BRD-K07979116	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06589
BRD-K89278382	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02803
SC-560-6870	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.963199
Prostate adenocarcinoma_PRAD_TCGA-KK-A59X-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-62-A471-01A-12R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10047
Uterine Carcinosarcoma_UCS_TCGA-QN-A5NN-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K66479240	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18279
Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A5PC-01A-11R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GN-06A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45O-01A-21R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2820-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K71590663	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4145
thioguanosine-1264	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.878567
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.857256
HS294T	CCLE Cell Line Gene CNV Profiles	1.0	2.07216
3-hydroxy-DL-kynurenine-2654	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
monorden-489	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TP53BP1_KD_GSE54268_669_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
BRD-K49298555	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49138
pancuronium bromide-7329	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-YH-A8SY-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sulfadiazine-1688	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3SN-01A-12R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cyclopentolate-6214	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
amoxicillin-5385	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K85112460	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.82387
BRD-K21180458	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00294
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.921161
REST_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM1A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
meclofenamic acid-1445	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.839831
COLO679	CCLE Cell Line Gene CNV Profiles	1.0	1.7524
danazol-1538	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K43969492	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47572
SNU1272	CCLE Cell Line Gene Expression Profiles	1.0	1.98646
harmalol-2892	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A67A-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-YL-A8HL-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE520	CCLE Cell Line Gene CNV Profiles	1.0	1.43875
Prostate adenocarcinoma_PRAD_TCGA-J4-A83J-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K91766181	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17535
BRD-K96779993	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.42956
BRD-K19100834	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07653
BRD-K75164441	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29077
HN	CCLE Cell Line Gene CNV Profiles	1.0	1.44527
Prostate adenocarcinoma_PRAD_TCGA-G9-6353-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K23327891	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.87328
COPD - Chronic obstructive pulmonary disease_Muscle - Striated (Skeletal) - Diaphragm (MMHCC)_GSE475	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.56199
BRD-K35341092	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03493
BRD-K16247913	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42063
BRD-K27726368	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18448
pyrithyldione-7153	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SK-MES-1	GDSC Cell Line Gene Expression Profiles	1.0	1.78303
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.33001
Lung adenocarcinoma_LUAD_TCGA-67-3774-01A-01R-0946-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K77663497	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04711
letrozole-2916	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
nalbuphine-5820	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pyrazinamide-4962	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K24689407	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.37065
GM97	BioGPS Cell Line Gene Expression Profiles	1.0	0.872262
metacycline-2901	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pentamidine-4573	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K76706127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0999
Lung adenocarcinoma_LUAD_TCGA-91-6847-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K77808555	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.32643
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.26036
BRD-K08927194	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26896
pridinol-5860	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K36me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0629
BRD-K71775851	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.82644
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.02458
morantel-1840	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lung adenocarcinoma_LUAD_TCGA-49-6767-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.829326
BRD-K14163107	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.36867
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZT-06A-11R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 578T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.90716
acetylsalicylic acid-984	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K47109712	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48225
AG-013608-5949	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
IRF1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.937393
Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6792-01A-21R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sickle Cell Anemia_Endothelial cell_GSE9877	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-0.306644
amitriptyline-5453	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LIVF001-022	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12192
Pancreatic adenocarcinoma_PAAD_TCGA-IB-7885-01A-11R-2156-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K42181022	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18826
EB2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.60622
geldanamycin-1008	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890104
A4FUK	CCLE Cell Line Gene CNV Profiles	-1.0	-2.17667
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Asthma, allergic_Bronchial epithelium_GSE3004	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.69811
GSK3B_KD_GDS4305_183_human_THP-1 acute myeloid leukemia cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
BRD-K95338817	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15307
BRD-K35230457	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.85603
exisulind-309	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CJM	CCLE Cell Line Gene CNV Profiles	1.0	1.85016
Lung squamous cell carcinoma_LUSC_TCGA-77-8130-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
chlorambucil-4523	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K79me2_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BRD-K48029682	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3344
Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-5625-01A-01R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	2.01556
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1IB-06A-11R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nifedipine-1692	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CD34+	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.54532
sirolimus-1632	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
AtrioventricularNode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.36178
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YE-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K62708569	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14132
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17141
BRD-K63270352	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.72594
BRD-K01627964	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29875
SW1271	CCLE Cell Line Gene CNV Profiles	-1.0	-2.8222
SYK_knockdown_280_GDS3609	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.50009
Kidney Chromophobe_KICH_TCGA-KO-8413-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PPARA_agonist activation_GSE17251_474_human_Isolated hepatocytes	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
BRD-K81592842	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09433
Lung adenocarcinoma_LUAD_TCGA-95-7567-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sulfasalazine-204	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39936
Sarcoma_SARC_TCGA-FX-A3TO-01A-11R-A22K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
W-13-643	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
benperidol-2836	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-4115-01A-01R-1193-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KNS81	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56429
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23061
OVKATE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39432
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.955295
BRD-K05122615	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0053
BRD-K10812033	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44359
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A3IE-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
thiocolchicoside-5520	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7413-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A5SS-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
sodium phenylbutyrate-407	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4923-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cefoxitin-6796	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K79517375	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.73104
Lung adenocarcinoma_LUAD_TCGA-50-5944-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mecamylamine-3525	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.12271
PNU-0293363-6563	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
thiamine-7479	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K70262646	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01175
Lung adenocarcinoma_LUAD_TCGA-86-8674-01A-21R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
A172	GDSC Cell Line Gene Expression Profiles	-1.0	-1.80324
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.03028
KMRC1	CCLE Cell Line Gene Expression Profiles	1.0	1.45825
N-acetyl-L-aspartic acid-3265	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung adenocarcinoma_LUAD_TCGA-44-8117-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K16255400	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.02437
ampicillin-2030	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942302
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.66419
KARPAS299	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39496
fluspirilene-6463	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10047
BRD-K53456628	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51789
calycanthine-6221	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SNG-M	GDSC Cell Line Gene Expression Profiles	-1.0	-1.47307
Pheochromocytoma and Paraganglioma_PCPG_TCGA-PR-A5PG-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6936-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CREBBP	ENCODE Transcription Factor Targets	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5695-01A-11R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K68401280	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38708
fusidic acid-1293	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5521-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29X-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K66655211	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06901
ABC1	CCLE Cell Line Gene Expression Profiles	1.0	2.36106
metampicillin-2123	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3JV-01A-11R-A220-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 294T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	3.24385
Kidney renal clear cell carcinoma_KIRC_TCGA-AS-3778-01A-01R-A32Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO679	CCLE Cell Line Gene Expression Profiles	1.0	1.48567
H3K4me1_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HSC-3	GDSC Cell Line Gene Expression Profiles	1.0	2.62372
BRD-K14258088	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.46417
BRD-K60337438	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10952
CREBBP_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
arecoline-1303	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
suxibuzone-6065	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K36me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
eldeline-3750	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20898
sulfaphenazole-5507	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DETROIT562	CCLE Cell Line Gene CNV Profiles	1.0	1.60362
7-aminocephalosporanic acid-4242	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
isradipine-5447	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HL60	BioGPS Cell Line Gene Expression Profiles	1.0	1.03041
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.71783
PML	MSigDB Cancer Gene Co-expression Modules	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-NA-A4QV-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
oligomycin-442	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
lobelanidine-1747	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SIRT6	ENCODE Transcription Factor Targets	1.0	null
J-RT3-T3-5	GDSC Cell Line Gene Expression Profiles	1.0	1.92569
BRD-K91615044	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17183
NR3C1_01_141	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	0.8125
H3K36me3_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.71168
CAL148	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65439
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.21225
CAL-12T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.888883
H3K36me3_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CAMA-1	GDSC Cell Line Gene Expression Profiles	1.0	1.54418
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2M6-06A-12R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hydrochlorothiazide-1987	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RBBP8	MSigDB Cancer Gene Co-expression Modules	1.0	null
POLR3A_01_139	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61382
BRD-K79627231	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27813
myricetin-3270	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
prazosin-826	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K68575551	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04471
Kidney Chromophobe_KICH_TCGA-KL-8336-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
rifampicin-4008	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CaR-1	GDSC Cell Line Gene Expression Profiles	1.0	1.44219
BRD-K47087435	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.1649
SNU-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.01807
BRD-K48038858	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04081
POLR2A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23702
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5879-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
neomycin-1383	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
wortmannin-6202	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
metanephrine-5334	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K36me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
asiaticoside-7244	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Sarcoma_SARC_TCGA-QQ-A8VF-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM5A	ENCODE Transcription Factor Targets	1.0	null
H4K20me1_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
BRD-K55648964	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19861
BRD-K54061956	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.39554
LC1F	CCLE Cell Line Gene Expression Profiles	-1.0	-1.59176
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3QK-01B-11R-A23N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
fludrocortisone-281	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Prostate adenocarcinoma_PRAD_TCGA-VN-A88Q-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
A101D	CCLE Cell Line Gene CNV Profiles	1.0	2.51478
Lung squamous cell carcinoma_LUSC_TCGA-56-7822-01A-11R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.59853
Head and Neck squamous cell carcinoma_HNSC_TCGA-T2-A6X2-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
antimycin A-2098	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K77401804	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06427
danazol-2038	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K63119190	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18326
BRD-K19672435	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.92901
tanespimycin-521	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H2228	GDSC Cell Line Gene Expression Profiles	-1.0	-3.05092
CHD4_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.23103
sulconazole-4998	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
KMRC20	CCLE Cell Line Gene Expression Profiles	1.0	2.26636
Lung squamous cell carcinoma_LUSC_TCGA-77-7463-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
viomycin-7036	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.890104
NCI-H2126	GDSC Cell Line Gene Expression Profiles	-1.0	-1.6589
perhexiline-2410	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K79me2_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
amprolium-4825	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K55841827	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06007
NCVADR RES	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.943477
furosemide-3197	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
amrinone-3465	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GSK3B_knockdown_208_GDS4305	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	3.38035
Lung squamous cell carcinoma_LUSC_TCGA-63-5131-01A-01R-1443-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K44207800	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05165
promazine-2173	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-7753-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH292	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57117
BRD-K28601178	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10024
acacetin-4324	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
COLO 679	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.45327
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.07682
SIRT6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
khellin-2004	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.856627
bambuterol-1582	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-7782-11A-01R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K16705729	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.50149
spectinomycin-3327	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49269
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4847-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nordihydroguaiaretic acid-1223	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K48332223	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.59553
fenbendazole-3805	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K09977699	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06599
calcium pantothenate-4775	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
delavirdine	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1682
BRD-K61247793	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34849
OSC-20	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
BRD-K32782599	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54683
oxedrine-6798	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
QGP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.849316
COV644	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92541
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0629
BRD-K06719105	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08562
Sarcoma_SARC_TCGA-DX-A1KY-01A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-01A-21R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CBX2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.93095
RBM8A	MSigDB Cancer Gene Co-expression Modules	1.0	null
adipiodone-5510	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
clebopride-6311	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5198-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SKMM2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53189
BRD-K14436020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11243
BRD-K67898193	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31794
BRD-K95729740	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.8212
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-5966-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EZH2_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
huh-7	BioGPS Cell Line Gene Expression Profiles	1.0	0.917795
sirolimus-326	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
COV318	CCLE Cell Line Gene Expression Profiles	-1.0	-1.65877
aztreonam-1435	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
xylometazoline-1423	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC1897	CCLE Cell Line Gene Expression Profiles	-1.0	-1.64162
terazosin-7187	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K71585907	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10006
BRD-A91404865	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00195
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6471-01A-11R-1873-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
kanamycin-4625	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
mebeverine-7147	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.02329
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4688-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-PR-A5PH-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RKO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.824413
BRD-K38244121	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10277
ES7	GDSC Cell Line Gene Expression Profiles	-1.0	-1.96981
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.5298
Acute Myeloid Leukemia_LAML_TCGA-AB-2975-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-X6-A7WC-01A-12R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K39981110	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17994
BRD-K05181466	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06535
epirizole-1681	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
viomycin-7278	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-S7-A7WN-01A-12R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JK-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.03175
Uterine Carcinosarcoma_UCS_TCGA-NF-A4X2-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A5KE-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
K562	CCLE Cell Line Gene CNV Profiles	1.0	2.24732
brompheniramine-4131	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SUDHL6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69108
MOLM6	CCLE Cell Line Gene CNV Profiles	1.0	1.58299
palmatine-6612	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.829326
butacaine-6225	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
OV56	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.85275
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.4644
HEY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.20132
clorsulon-1735	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
valproic acid-5219	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
coralyne-6317	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cefotetan-3997	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K86039224	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13837
chlorpromazine-1217	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
bisacodyl-2435	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.878567
ciclosporin-4586	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CAL51	CCLE Cell Line Gene Expression Profiles	1.0	1.43994
15(S)-15-methylprostaglandin E2-7494	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung adenocarcinoma_LUAD_TCGA-78-7166-01A-12R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
metaraminol-3669	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
clofilium tosylate-4492	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
apigenin-4401	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11312
CL-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963876
T3M10	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52098
Liver hepatocellular carcinoma_LIHC_TCGA-WQ-A9G7-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K37971917	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07537
sulfamerazine-3718	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942302
H3K36me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K33272704	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31177
isocarboxazid-3424	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Sarcoma_SARC_TCGA-DX-A6B8-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-3.14361
suprofen-4005	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
U343	CCLE Cell Line Gene Expression Profiles	-1.0	-2.10975
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.948187
CD19+_BCells(neg._sel.)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.834205
diethylcarbamazine-5485	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TGBC24TKB	GDSC Cell Line Gene Expression Profiles	1.0	1.83257
SNU201	CCLE Cell Line Gene Expression Profiles	-1.0	-1.63616
ciclosporin-602	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.999675
JHH7	CCLE Cell Line Gene CNV Profiles	1.0	1.45256
morantel-1676	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.875199
dexpropranolol-5814	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
dicoumarol-3766	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ivermectin-1367	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K58696904	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07613
A375	GDSC Cell Line Gene Expression Profiles	-1.0	-1.58059
Sarcoma_SARC_TCGA-DX-A48K-01A-11R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dexpropranolol-6130	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
metolazone-5392	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39296
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.929248
BRD-K82935855	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01438
cyclopentolate-6132	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.95423
dinoprostone-6547	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K36me3_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K26852477	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14736
clebopride-1292	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
4-hydroxyphenazone-1997	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824751
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IRF1	ENCODE Transcription Factor Targets	1.0	null
BRD-K11013450	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.28242
oseltamivir-phosphate	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36615
BRD-K01850737	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29224
H3K4me3_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BRD-K69089961	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15363
methotrexate-6318	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-52-7810-01A-11R-2125-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K25660189	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23793
seneciphylline-4238	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-77-8146-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TRIM28_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COLO 679	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54071
BRD-K82683018	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27988
BRD-K07351191	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13963
thioridazine-1486	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BB65-RCC	GDSC Cell Line Gene Expression Profiles	1.0	1.74055
BRD-K84688359	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.73904
(-)-isoprenaline-3571	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K36me3_keratinocyte_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K66457675	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.3211
BRD-K13679727	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09089
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.3051
H3K36me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
BRD-K53931904	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.74226
meropenem-5824	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BT483	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42462
glibenclamide-1546	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
piperine-1327	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K36me3_U2OS_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864798
BRD-K98639224	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.01262
NCIH1648	CCLE Cell Line Gene CNV Profiles	-1.0	-2.01441
doxylamine-4819	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.917525
H3K79me2_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BRD-K90858591	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.44508
metacycline-4062	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K07615667	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.03823
BRD-K60780031	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01596
Lung squamous cell carcinoma_LUSC_TCGA-21-5784-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A6E6-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K18447546	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01462
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31363
BRD-K09720842	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.70806
troglitazone-504	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ondansetron-6153	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
L-methionine sulfoximine-2470	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K9me1_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BRD-K74554256	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4544
BRD-K89107430	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.60105
BRD-K01798544	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15928
rescinnamine-2130	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
harpagoside-2935	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8405-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K92513859	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.91719
alimemazine-3478	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
6-benzylaminopurine-2351	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tiaprofenic acid-2852	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
butamben-6266	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34559
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.91135
POLR2AphosphoS5_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hydroxyzine-5006	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
asiaticoside-7004	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	1.32911
Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-4116-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K54332480	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.94678
BRD-K89931949	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0094
indometacin-503	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K91696235	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24739
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39156
Prostate adenocarcinoma_PRAD_TCGA-KK-A8II-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
diphemanil metilsulfate-1994	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
A101D	CCLE Cell Line Gene Expression Profiles	1.0	1.58628
meptazinol-7326	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-6789-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
prednisone-1897	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K14570970	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.33574
BRD-K93032100	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10429
BRD-K90335150	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1345
BRD-K30173420	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02123
AMO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.09166
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IBMX	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.53298
BRD-K56415410	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.02208
Prestwick-1082-3530	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2897-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-G6-A8L8-01A-21R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K08982277	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31549
BRD-K98343273	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23174
BRD-K88679751	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02511
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.903233
trimethadione-2486	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PCM6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54725
BRD-K37331547	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29655
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7102-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dizocilpine-5746	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
chlorhexidine-6302	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
valproic acid-1222	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
REST	ENCODE Transcription Factor Targets	1.0	null
carbamazepine-1683	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
buspirone-1282	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.95423
aclarubicin	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54873
15(S)-15-methylprostaglandin E2-7521	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K45508763	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54667
BRD-K68233995	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14284
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FA-A4BB-01A-11R-A31O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-J2-8194-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-58-8387-01A-11R-2296-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K39020351	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08224
BRD-K44363090	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43749
NCI-H2228	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.00146
Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HG-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-66-2766-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5FP-01A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
amprolium-1898	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
5155877-6569	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Kidney Chromophobe_KICH_TCGA-KL-8346-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K25304254	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.86441
BRD-K30812092	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.52509
BDCA4+_DentriticCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.6999
Brain Lower Grade Glioma_LGG_TCGA-DU-6397-02A-12R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.85543
Kidney renal clear cell carcinoma_KIRC_TCGA-B8-5550-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DETROIT562	CCLE Cell Line Gene Expression Profiles	1.0	1.51048
CAL51	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.01766
BRD-K22715231	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.77568
TC-71	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.50093
UACC-257	GDSC Cell Line Gene Expression Profiles	-1.0	-1.53288
FDXR	MSigDB Cancer Gene Co-expression Modules	1.0	null
BRD-K86298765	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.67988
Adrenocortical carcinoma_ACC_TCGA-OR-A5LE-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SOX2	ChEA Transcription Factor Targets	1.0	null
BRD-K28314528	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15944
BRD-K09895564	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.44697
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.832618
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15405
piribedil-5434	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7401-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K90756713	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01773
BCB000039-7536	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
dropropizine-2398	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K51446586	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61598
Bladder Urothelial Carcinoma_BLCA_TCGA-R3-A69X-01A-22R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
phenazone-1989	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58054
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4340-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VMRCLCD	CCLE Cell Line Gene Expression Profiles	1.0	1.41845
BRD-K75074041	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27315
fulvestrant-523	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B8-A54D-01A-21R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H460	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.842916
monastrol-668	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
indometacin-262	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
tranexamic acid-1401	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K61134709	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.4898
BRD-K14813155	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11338
BRD-K58985886	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05388
BRD-K33951208	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25798
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.63669
isoxicam-7268	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
trichostatin A-1891	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K77082178	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.48176
SRC_UP.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
BRD-K12741517	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.09976
Bladder Urothelial Carcinoma_BLCA_TCGA-GU-A42P-01A-11R-A23W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.99207
BRD-K61185334	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00208
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3123
lomefloxacin-2348	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K09721123	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.72265
BRD-K40018788	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11159
sodium phenylbutyrate-434	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K13898728	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.86558
BRD-K29086754	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.87796
naphazoline-6604	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
difenidol-2374	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
IGROV1	CCLE Cell Line Gene Expression Profiles	1.0	2.52634
lorglumide-4658	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TP63	ChEA Transcription Factor Targets	1.0	null
tiletamine-7311	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K66823946	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0457
procaine-1838	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTIP_DN.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.00156
thioridazine-417	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CBX2	ENCODE Transcription Factor Targets	1.0	null
BRD-K67626198	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0821
BRD-K43911180	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.6443
chlorphenesin-1432	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K24263752	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03896
Prestwick-1083-6357	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B8-5553-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8419-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
dihydroergocristine-2895	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HS294T	CCLE Cell Line Gene Expression Profiles	1.0	3.37286
desipramine-3212	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Prostate adenocarcinoma_PRAD_TCGA-VN-A88R-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-44-4112-01A-01R-1107-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K13888422	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07945
BRD-K42797038	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.64918
BRD-K79833963	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11361
BRD-K09878843	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45675
terbutaline-5764	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K04652643	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28881
BRD-K00542622	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02746
chlorhexidine-1942	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K59708864	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13615
Lung squamous cell carcinoma_LUSC_TCGA-66-2756-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
terazosin-5831	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1BM-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K38347298	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40147
acetazolamide-1808	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K02783902	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.72319
estradiol-665	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A20018680	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08524
OAW28	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74315
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A1A3-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
thiamazole-2570	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K36me3_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
enalapril-2397	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-2.15607
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A822-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TT	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54703
BRD-K65354878	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29139
dapsone-1705	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
imatinib-366	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
butacaine-5748	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5LD-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tracazolate-4964	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K21595913	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08953
SW 837	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23245
BRD-K62358627	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.57845
BRD-K82102352	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.51339
BRD-K66703091	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.07708
BRD-K31503053	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.35103
BRD-K81457218	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22003
reserpine-3341	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
6-azathymine-2827	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8QF-01A-21R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
meticrane-1671	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K83494171	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.53456
BRD-K00078503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.28351
BRD-K88925664	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.43632
H3K36me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3473-01A-01R-1193-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K65320638	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32526
medrysone-3403	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K84158675	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10088
MALME 3M	BioGPS Cell Line Gene Expression Profiles	1.0	1.45928
ampyrone-1402	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
pcgf2_17452456_medulloblastoma_lof_human_gpl570_gds2724	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.222537
tilmicosin	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22259
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.95423
sulpiride-1967	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CORL88	CCLE Cell Line Gene Expression Profiles	-1.0	-1.46126
primaquine-4263	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.07485
ISTMES2	CCLE Cell Line Gene Expression Profiles	1.0	1.55891
HS746T	CCLE Cell Line Gene CNV Profiles	1.0	1.33514
G141	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.83844
PANC0203	CCLE Cell Line Gene CNV Profiles	1.0	1.33339
bendroflumethiazide-3758	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
pralidoxime-6443	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
gabapentin-2731	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K54621976	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.63668
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11312
Lung adenocarcinoma_LUAD_TCGA-44-7671-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6436-01A-11R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CEBPB	ENCODE Transcription Factor Targets	1.0	null
HELA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.853607
BRD-K44339278	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05639
BRD-K90694955	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44575
BRD-K93210276	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00249
BRD-K66453893	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35443
solasodine-3749	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cinchocaine-1969	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K21232462	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.47282
raubasine-5459	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K47536398	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35314
orciprenaline-2485	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Mesothelioma_MESO_TCGA-TS-A7PB-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13842
CAOV3	CCLE Cell Line Gene CNV Profiles	1.0	1.89539
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.05775
BRD-K86448296	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0472
BRD-K76197651	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09547
nocodazole-2076	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
7-aminocephalosporanic acid-4826	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K16251850	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07238
BRD-K11990377	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.17553
LY-294002-501	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
KMS21BM	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09233
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
fenoprofen-3412	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Prestwick-682-2164	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
imidurea-5062	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.42259
Brain Lower Grade Glioma_LGG_TCGA-FG-7637-01A-11R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K55393423	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02266
BRD-M13639915	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.30802
NCIH1755	CCLE Cell Line Gene CNV Profiles	1.0	1.82618
Acute Myeloid Leukemia_LAML_TCGA-AB-3002-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
demecarium bromide-2773	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3IN-01A-11R-A20F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
spaglumic acid-2962	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HSC3	CCLE Cell Line Gene CNV Profiles	1.0	1.39165
TRIM28	ENCODE Transcription Factor Targets	1.0	null
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.02329
iproniazid-2288	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K90325960	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.60855
ethaverine-6737	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A4AX-01A-12R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
amoxapine-2013	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
hydrastine hydrochloride-2889	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
biperiden-2460	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3WX-01A-22R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
rifampicin-2847	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
quinidine-6267	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LIVF001-021	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43587
nordihydroguaiaretic acid-524	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K21470524	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.50096
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-0.918412
DDX11	MSigDB Cancer Gene Co-expression Modules	1.0	null
prednisolone-2393	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cefotaxime-7186	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
sirolimus-1022	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
trifluoperazine-1165	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ganciclovir-5389	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3574
5666823-609	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K17120673	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00473
BRD-K79829201	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.9152
ciclacillin-4536	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
EW-16	GDSC Cell Line Gene Expression Profiles	-1.0	-1.70177
sisomicin-2853	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H3K79me1_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49269
BRD-K92210988	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11827
Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KR-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-60-2722-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tetraethylenepentamine-405	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
COLO775	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8758
Lung adenocarcinoma_LUAD_TCGA-44-2655-01A-01R-0946-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sarcoma_SARC_TCGA-K1-A6RV-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-6033-01A-11R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nordihydroguaiaretic acid-203	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.75911
BRD-K27599706	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27585
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5KH-06A-11R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K58944125	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41959
ticarcillin-5829	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
A3/KAW	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.2334
pilocarpine-2438	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K36099605	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.35222
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.31027
Lung adenocarcinoma_LUAD_TCGA-49-4514-01A-21R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.3229
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70R-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH1373	CCLE Cell Line Gene CNV Profiles	-1.0	-2.39396
Head and Neck squamous cell carcinoma_HNSC_TCGA-F7-A61W-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
pyrimethamine-1894	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KMS-28BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24741
clozapine-416	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NAMALWA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.896218
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	0.969527
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.1818
flumetasone-2551	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70D-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LU65	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41259
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A4F9-06A-11R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K28351377	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15703
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.876189
BRD-K45318035	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44077
pargyline-2102	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	-1.0	-1.2282
PF-382	GDSC Cell Line Gene Expression Profiles	-1.0	-2.13089
PCM6	CCLE Cell Line Gene Expression Profiles	-1.0	-2.76611
BRD-K06091213	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1928
methyldopate-7360	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cromoglicic acid-5754	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-6981-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
moroxydine-2027	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
fluorocurarine-6219	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H2228	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27628
NCIH1693	CCLE Cell Line Gene CNV Profiles	1.0	2.32174
amiloride-1970	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
COLO829	CCLE Cell Line Gene Expression Profiles	1.0	1.43512
naphazoline-1886	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Sarcoma_SARC_TCGA-MB-A8JK-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K39824708	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09079
LN18	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.13691
BRD-K33597325	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.09617
estradiol-365	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
isoxsuprine-4789	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cinchocaine-1469	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K03141963	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65394
BRD-K83708664	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.64052
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	1.51656
tiratricol-2096	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
mepenzolate bromide-3748	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BCB000038-7516	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K63711467	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08546
troleandomycin-1465	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78434
hsa-miR-192-5p	MiRTarBase microRNA Targets	1.0	null
BRD-K21533599	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13051
Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-7828-01A-11R-2139-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AGS	CCLE Cell Line Gene Expression Profiles	1.0	1.46984
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
lincomycin-7411	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-77-8145-01A-11R-2247-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RXF393	GDSC Cell Line Gene Expression Profiles	-1.0	-1.42865
H3K36me3_CD4 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
EZH2_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K21176869	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23406
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2IR-01A-11R-A180-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RNF2	ENCODE Transcription Factor Targets	1.0	null
BRD-A07944983	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.07359
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles	1.0	2.4377
BRD-K95795676	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06996
pentoxifylline-2127	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
clonidine-6814	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
oxybuprocaine-1976	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K36618106	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20316
Skin Cutaneous Melanoma_SKCM_TCGA-DA-A1I7-06A-22R-A18S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BRD-K12984952	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.02939
Prostate adenocarcinoma_PRAD_TCGA-KK-A8IH-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864798
EZH2_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRD-K34787855	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.45022
BRD-K19662956	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05374
harmol-6022	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
piperlongumine-2757	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K06094529	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2353
fusaric acid-3245	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K25646425	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.70462
BRD-K89515752	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.8091
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04378
BRD-K95877349	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.09953
H3K36me3_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4697-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nitrendipine-6304	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HSC3	CCLE Cell Line Gene Expression Profiles	1.0	2.0566
tolbutamide-3804	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K33752391	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02907
NCIH520	CCLE Cell Line Gene Expression Profiles	-1.0	-1.4816
TE-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50909
F5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74859
saquinavir-3549	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K90133009	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.82808
quercetin-283	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Lung adenocarcinoma_LUAD_TCGA-78-7537-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CD56+_NKCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.63668
tetramisole-2849	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
mercaptopurine-667	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A71U-01A-12R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41R-01A-21R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
clemizole-2339	CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K49864183	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43151