association	dataset	threshold value	standardized value
DG(20:1n9/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
LAMP1	Pathway Commons Protein-Protein Interactions	1.0	null
Secondary motor area, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33047
DG(24:0/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
NSL complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.929
DG(20:0/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
deep layers of olfactory entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.22226
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08309
intermediate part of r6B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1
DG(22:0/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of the Fc	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.41414
abnormality of the urethra	GWASdb SNP-Phenotype Associations	1.0	1.45387
SEMA3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23097
DG(20:2(11Z,14Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
r9 portion of the hypoglossal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.57759
regulation of biological quality	GO Biological Process Annotations 2015	1.0	null
RAB21	Pathway Commons Protein-Protein Interactions	1.0	null
NCIH1703	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33171
H3K4me3_cardiac mesoderm_hg19_5	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
496100612_HIP_no dementia_no TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.71905
DG(15:0/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE211177,GSE211178_4_v_3_ets1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Dorsal nucleus raphe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06799
GSE205070_1_v_4_mertk_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:0/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MT-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
adenyl ribonucleotide binding	GO Molecular Function Annotations 2015	1.0	null
cell-line-tumor	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(20:3(8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
USE1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:0/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
HSPA1B	Pathway Commons Protein-Protein Interactions	1.0	null
layer 3 of ERCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.27473
Perturb_13189_KO_Rbfox2_SRP216887	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-1.88648
RHOT1	Pathway Commons Protein-Protein Interactions	1.0	null
PLEC	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(5Z,8Z,11Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MER	Kinase Library Tyrosine Kinome Atlas	1.0	99.48
496100503_HIP_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.37835
MAPK14	Pathway Commons Protein-Protein Interactions	1.0	null
motor nucleus of trigeminal nerve, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.11688
TRIM28	Pathway Commons Protein-Protein Interactions	1.0	null
GSE179031_3_v_1_foxp1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(16:0/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
increased startle reflex	MGI Mouse Phenotype Associations 2023	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1n9/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
CCDC50	Pathway Commons Protein-Protein Interactions	1.0	null
H3K27ac_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE180200,GSE180201_12_v_6_qpctl_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
SEPT2	Pathway Commons Protein-Protein Interactions	1.0	null
HCC1954	CCLE Cell Line Gene CNV Profiles	1.0	1.40815
DG(22:2(13Z,16Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
cellular metabolic process	GO Biological Process Annotations 2015	1.0	null
RAB10	Pathway Commons Protein-Protein Interactions	1.0	null
rnf2_20123906_mouse_embryonic_stem_cell_lof_mouse_gpl1261_gse19076	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.027723
SMC1A	Pathway Commons Protein-Protein Interactions	1.0	null
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0717
nucleus sagulum, superficial part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14284
DG(22:0/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
r5 part of ventral lateral lemniscal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14373
GSE94849_6_v_4_pinometostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE103297_1_v_0_glis3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:1(13Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAB13	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_8464_OE_C2_SRP242584	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
EIF2B4	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-J7-8537-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTCF_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(14:0/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_Caco-2_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
ARL8A	Pathway Commons Protein-Protein Interactions	1.0	null
GSE210580_0_v_11_rag2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE224004,GSE224005_0_v_8_chd4_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:4n3/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_megakaryocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(16:1(9Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
Diacylglycerol kinase, accessory domain	InterPro Predicted Protein Domain Annotations	1.0	null
VAPB	Pathway Commons Protein-Protein Interactions	1.0	null
increased startle reflex	IMPC Knockout Mouse Phenotypes	1.0	null
DG(22:1(13Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
JHH6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43142
DG(20:2(11Z,14Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE254649_3_v_0_cstf2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
single-organism cellular process	GO Biological Process Annotations 2015	1.0	null
DG(24:1(15Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
retroreuniens nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.10156
DG(18:0/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
medial habenular nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.26225
GSE208435_0_v_1_dnmt3a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
POLR2A_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Mesothelioma_MESO_TCGA-SC-A6LM-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(14:1(9Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
male	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(16:0/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
GSE137914_0_v_1_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
inferior olive, dorsal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.50479
DG(20:4(5Z,8Z,11Z,14Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ribonucleotide binding	GO Molecular Function Annotations 2015	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N5-A4RT-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PLEKHA7	Pathway Commons Protein-Protein Interactions	1.0	null
PNISR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73249
Cerebellar cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02648
response to stimulus	GO Biological Process Annotations 2015	1.0	null
preoptic region, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.61394
DG(22:6n3/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5n3/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
anterior paraventricular nucleus of thalamus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.40718
DG(20:0/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
VAMP8	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:4n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/16:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
EZH2_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SMAD2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:4n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-5874-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6347712-pnas.1812449116.sd05.xlsx-iPSC_IRF7_48h_RNAExpress-Gene_IRF7	Rummagene Transcription Factor Associations 2026	1.0	null
KDM4A	ENCODE Transcription Factor Targets	1.0	null
Neuron spine	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.553
DG(16:1(9Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
42-MG-BA	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-gene_id_y_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
Perturb_1756_KO_Ripk3_SRP226420	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-1.56764
GSE94814_1_v_0_reck_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
common	GeneRIF Biological Term Annotations	1.0	null
lateral (dentate) cerebellar nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.24481
frontalcortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.990006
superficial stratum of r8BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.72468
DG(18:1n7/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976791
Perturb_539_OE_EWS_SRP168620	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	4.88168
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A9FW-01A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me3_ES-E14_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(16:0/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
superficial dorsofrontal area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23035
EXOC3	Pathway Commons Protein-Protein Interactions	1.0	null
Copula pyramidis	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.46353
HCC2279	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52492
DG(20:4n3/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
GSE164757,GSE164759_4_v_3_trametinib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
superficial stratum of cerebellar hemisphere	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.86989
H3K27me3_Fetal Heart	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
AGK	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:0/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
UNG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0267
CTCF_BE2C_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
496100365_HIP_probable Alzheimer's disease_TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.29869
r7 part of parapyramidal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58087
GSE164505,GSE164506_3_v_2_indisulam_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE189789_0_v_1_oridonin_human	RummaGEO Drug Perturbation Signatures	1.0	null
CREB1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(24:1n9/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
blood	Phosphosite Textmining Biological Term Annotations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HG-A2PA-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
phosphotransferase activity, alcohol group as acceptor	GO Molecular Function Annotations 2025	1.0	null
DG(20:0/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
MAPK1	Pathway Commons Protein-Protein Interactions	1.0	null
Prostate Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
layer IIIa of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.22924
DG(18:2(9Z,12Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PA(18:1(11Z)/18:1(11Z))	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_kidney epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hypospadias	GAD Gene-Disease Associations	1.0	null
phosphorus metabolic process	GO Biological Process Annotations 2015	1.0	null
GSE205163,GSE205164_9_v_4_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
MAPKAPK3	Pathway Commons Protein-Protein Interactions	1.0	null
MTF2-20144788-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
DG(20:2(11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71841
H3K4me3_Fetal Brain	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K4me2_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(24:1(15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE173810_0_v_3_igf2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC10079833-41467_2023_37542_MOESM11_ESM.xlsx-Sheet1-Supplementary_Data_10_Significantly_differentially_expressed_genes_identified_in_IGF2BP1-KD_cells_compared_to_control_cells_AR	Rummagene Transcription Factor Associations 2026	1.0	null
magnocellular division of VA	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.37165
SNX12	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TBP	ENCODE Transcription Factor Targets	1.0	null
STXBP3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RALB	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:0/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
RAC1	Pathway Commons Protein-Protein Interactions	1.0	null
CANX	Pathway Commons Protein-Protein Interactions	1.0	null
H3K27me3_CD4+ CD25- CD45RA+ Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE130081,GSE130082_0_v_10_neil2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(18:0/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE180951_6_v_0_bleomycin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
H3K4me3_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1599	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76149
dorsal lateral geniculate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.07009
CDC5L	Pathway Commons Protein-Protein Interactions	1.0	null
MYC	ENCODE Transcription Factor Targets	1.0	null
ATP6V1G1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE153189_2_v_0_interferon gamma_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:3(9Z,12Z,15Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
response to stress	GO Biological Process Annotations 2015	1.0	null
DG(16:1(9Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1n9/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
XPO7	Pathway Commons Protein-Protein Interactions	1.0	null
TBP_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846534
Perturb_5372_KD_MED13_SRP094120	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	13.4691
DG(18:0/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
NCIH1793	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71238
DG(20:0/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_olfactory bulb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
OSBPL10	Pathway Commons Protein-Protein Interactions	1.0	null
strongly	GeneRIF Biological Term Annotations	1.0	null
GSE138633_2_v_0_bag3_human	RummaGEO Gene Perturbation Signatures	1.0	null
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
GNB2L1	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_H7_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAB5C	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:0/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CHP1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ANXA7	Pathway Commons Protein-Protein Interactions	1.0	null
SFTPC_KO_GDS4876_476_mouse_Lung Type II cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
periventricular stratum of r10Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.21342
GSE116492,GSE116495_3_v_1_stag2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Perturb_15025_OE_Thra_SRP335029	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	7.7787
EXOC7	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:0/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
MAP2K3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
MTF2	ChEA Transcription Factor Targets	1.0	null
parataenial nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.67512
DG(20:4(8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of r6Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.85759
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-HNF1A_HNF1A	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:3(5Z,8Z,11Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2(13Z,16Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_17213_OE_EWSFLI_SRP261076	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-3.44605
DG(16:1(9Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE174522_1_v_0_spp1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
CiliaryGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.920065
medial subhabenular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23386
DG(18:4(6Z,9Z,12Z,15Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
CTBP2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r4 part of cochlear sensory column	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.63273
facial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.17711
VZ in caudal subicular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.89307
ADRM1	Pathway Commons Protein-Protein Interactions	1.0	null
dorsolateral part of Int	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.76451
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5891-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(24:0/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1n9/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
supragenual nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.66856
RAD21_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PDS5B	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:0/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
Fragile X-associated tremor/ataxia syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.103
COG4	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_15875_KO_Atoh1_SRP002802	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	3.45477
molecular_function	GO Molecular Function Annotations 2015	1.0	null
DG(20:3n6/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
Perturb_5636_KD_SOX2_SRP174102	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	13.5366
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.037199
LRP10	Pathway Commons Protein-Protein Interactions	1.0	null
TM9SF1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:1(9Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
ARAP1	Pathway Commons Protein-Protein Interactions	1.0	null
nucleus of the diagonal band, left, horizontal division	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.91679
GSE128634,GSE128636_4_v_0_foxo1_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:3(6Z,9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
496100447_HIP_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.11328
TRAPPC4	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_6431_KD_ADAR_SRP268834	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	2.23364
PRAF2	Pathway Commons Protein-Protein Interactions	1.0	null
EVPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50221
DG(18:2n6/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE44157,GSE44163_3_v_0_nr6a1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ANXA9	Pathway Commons Protein-Protein Interactions	1.0	null
H3K9ac_NT2-D1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE139016_3_v_2_disulfiram_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:3(9Z,12Z,15Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
fastigial nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.25176
DG(20:3(5Z,8Z,11Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
eed_20123906_mouse_embryonic_stem_cell_lof_mouse_gpl1261_gse19076	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.07427
Gastrin-CREB signalling pathway via PKC and MAPK	Reactome Pathways 2014	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A8YT-01A-11R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Entorhinal area, medial part, ventral zone, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.22707
DG(20:0/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
PITPNB	Pathway Commons Protein-Protein Interactions	1.0	null
EPS8L2	Pathway Commons Protein-Protein Interactions	1.0	null
Paramedian lobule, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.47861
Perturb_540_OE_EWS/FLI_SRP168620	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	19.3979
EHD4	Pathway Commons Protein-Protein Interactions	1.0	null
COR-L311	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
DG(24:0/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
GSE100102_4_v_6_cgas_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
VZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.06865
VAPA	Pathway Commons Protein-Protein Interactions	1.0	null
DG(15:0/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TLN2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE84462,GSE84762_0_v_7_ezh2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
phosphotransferase activity, alcohol group as acceptor	GO Molecular Function Annotations 2015	1.0	null
DG(22:5n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
periventricular stratum of CbH	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.81625
Liver hepatocellular carcinoma_LIHC_TCGA-2Y-A9GX-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hmgn1_KO_GDS5010_405_mouse_liver	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
IZ in dorsomedial parietal cortex (area 7m)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.835255
GSE158431_2_v_6_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(16:0/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
VPS36	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(6Z,9Z,12Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2(13Z,16Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ARCN1	Pathway Commons Protein-Protein Interactions	1.0	null
PMC9248879-supp_gr.275831.121_Supplemental_Table_S2.xlsx-TP53-dependent_proteins-GeneName_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
DG(24:0/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
CTCF_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-FOXA1_FOXA1	Rummagene Transcription Factor Associations 2026	1.0	null
DG(14:0/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Hypospadias	GWAS Catalog SNP-Phenotype Associations	1.0	1.07711
PYK2	Kinase Library Tyrosine Kinome Atlas	1.0	98.73
GSE142210_11_v_0_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(20:3n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
dorsal juxtacommissural pretectal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09072
ATP-NAD kinase-like domain	InterPro Predicted Protein Domain Annotations	1.0	null
NRAS	Pathway Commons Protein-Protein Interactions	1.0	null
r7 part of rostral ventromedial reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29179
RFX5_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(16:1(9Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
STARD5	Pathway Commons Protein-Protein Interactions	1.0	null
BCL11B_KO_GSE9330_4_mouse_brain (striatum)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Perturb_5569_KD_SIX2_SRP254559	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
Noonan syndrome with multiple lentigines 3	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.728
POLR2A	ENCODE Transcription Factor Targets	1.0	null
UHRF1	Pathway Commons Protein-Protein Interactions	1.0	null
r6 part of paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.35962
H3K9me3_erythroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(14:1(9Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
abnormality of male external genitalia	GWASdb SNP-Phenotype Associations	1.0	0.484473
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Male urethra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.527
Brain Lower Grade Glioma_LGG_TCGA-FG-5962-01B-11R-1896-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(14:1n5/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
HCC1143	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.779114
DG(20:4(5Z,8Z,11Z,14Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Mesothelioma_MESO_TCGA-MQ-A6BS-01A-12R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-33-4533-01A-01R-1201-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Medial preoptic area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0849
H3K4me3_cardiac mesoderm_hg19_6	ENCODE Histone Modification Site Profiles	1.0	null
GSE137914_2_v_1_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
VZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.30244
DG(18:2n6/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
Inherited metabolic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.026
NCIH1355	CCLE Cell Line Gene CNV Profiles	1.0	1.32802
TP53BP2	Pathway Commons Protein-Protein Interactions	1.0	null
r8 part of the paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.9546
DG(18:1n9/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
Plasmacytoid T-lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.5
cerebellar white matter	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.8153
DG(16:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE100102_0_v_6_cgas_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ZNF263_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cellular_component	GO Cellular Component Annotations 2015	1.0	null
superficial stratum of r8BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.95529
DG(22:0/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2(11Z,14Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
GSE137914_0_v_3_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CLPP_KO_GSE40207_388_mouse_testis	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
STEAP3	Pathway Commons Protein-Protein Interactions	1.0	null
GSE148252_1_v_4_npas4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
496100304_HIP_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.12669
DG(20:4(8Z,11Z,14Z,17Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EIF2B1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE216043_7_v_8_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
JHH2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20312
DG(20:3(8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4n6/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
EIF2B2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
SG in caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.853689
DG(18:4(6Z,9Z,12Z,15Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_7046_KO_miR19a/miR19b1_SRP050491	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-8.35474
TAP2	Pathway Commons Protein-Protein Interactions	1.0	null
Central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.084
DG(20:3n9/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
HOS	CCLE Cell Line Gene CNV Profiles	1.0	2.00706
Brain Lower Grade Glioma_LGG_TCGA-HT-A74L-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE48812_2_v_5_sulforaphane_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE153871_4_v_3_cytarabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.964288
DG(20:3(5Z,8Z,11Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
posterior orbital gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.16769
JUND	ENCODE Transcription Factor Targets	1.0	null
CASK	Pathway Commons Protein-Protein Interactions	1.0	null
decreased grip strength	MGI Mouse Phenotype Associations 2023	1.0	null
496100465_HIP_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.38376
MGAT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02342
DG(22:0/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE176008_0_v_2_azacitidine_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(20:3(5Z,8Z,11Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_kidney_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE109140_0_v_3_valproic acid_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
r7 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11108
PSEN1	Pathway Commons Protein-Protein Interactions	1.0	null
Prelimbic area, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.01322
Disease of metabolism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.101
STAT1	Pathway Commons Protein-Protein Interactions	1.0	null
plexiform layer of TuPal	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.33413
Climbing fiber	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.985
X-linked monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.904
CFL1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1n7/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
KE39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57845
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
DG(16:1(9Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
LGR5	Pathway Commons Protein-Protein Interactions	1.0	null
periventricular stratum of r3Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.6249
GSE196699_2_v_6_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE189356_3_v_6_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF417	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7097
GlobusPallidus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.931321
GSE261563_0_v_1_atrx_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-TFCP2L1_TFCP2L1	Rummagene Transcription Factor Associations 2026	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983172
DG(18:0/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
GSE76425_0_v_5_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PTK2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(9Z,12Z,15Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RPS6KA5	Pathway Commons Protein-Protein Interactions	1.0	null
GSE113385_0_v_1_six1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ERGIC1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE227891_2_v_0_ethanol_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(22:2n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
1,2-Diacyl-sn-glycerol	MW Enzyme Metabolite Associations	1.0	null
posterior orbital gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.941435
DG(20:3(8Z,11Z,14Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Entorhinal area, lateral part, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.47542
GSE199255,GSE199356_4_v_1_pds5a_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE196699_4_v_1_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(18:1(9Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAB23	Pathway Commons Protein-Protein Interactions	1.0	null
lateral hypothalamic area, mammillary region, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.892821
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3209
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3453-01A-02R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE216273,GSE216292_14_v_2_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ATP6V0C	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:1n7/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
diacylglycerol kinase activity	GO Molecular Function Annotations 2015	1.0	null
DG(22:0/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
MAP2K4	Pathway Commons Protein-Protein Interactions	1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-CTCF_CTCF	Rummagene Transcription Factor Associations 2026	1.0	null
inner SZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.45293
DG(20:1(11Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Spinocerebellar ataxia type 18	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.221
ZNF100	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49445
DG(18:2n6/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
AP1M2	Pathway Commons Protein-Protein Interactions	1.0	null
PMC8600817-12951_2021_1120_MOESM2_ESM.xlsx-Table_S4-Table_S4_Pan_PPAR-iMSC-EV-induced_differentially_expressed_genes_in_fatty_acid-treated_HepG2_cells_PPARA	Rummagene Transcription Factor Associations 2026	1.0	null
VPS28	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:1n7/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
Leydig cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.073
Taenia tecta, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.764
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.63246
H3K27me3_H1 BMP4 Derived Mesendoderm Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(22:4n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-4224-01A-01R-1436-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-78-7155-01A-11R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(18:0/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
SNCA_KO_GDS4153_527_mouse_striatum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
increased circulating HDL cholesterol level	MGI Mouse Phenotype Associations 2023	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3n9/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
GSE218580_1_v_4_fentanyl_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
EIF2D	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1(9Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
USP9X	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CHD7	ENCODE Transcription Factor Targets	1.0	null
DG(18:3n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
signal transduction	GO Biological Process Annotations 2015	1.0	null
Phosphatidate	MW Enzyme Metabolite Associations	1.0	null
DG(18:0/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
frontal pole, right, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.999838
GSE196699_2_v_1_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(20:3n9/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE173810_0_v_1_igf2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC8528285-pbio.3001085.s010.xlsx-Fig_7A-MAX_WT_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(18:3(6Z,9Z,12Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
AP1G1	Pathway Commons Protein-Protein Interactions	1.0	null
superficial stratum of r7BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.3365
PPP1R7	Pathway Commons Protein-Protein Interactions	1.0	null
Rhabdomere microvillus	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.363
DG(22:4(7Z,10Z,13Z,16Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Glycerolipid metabolism	KEGG Pathways 2026	1.0	null
DG(20:0/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
cell part	GO Cellular Component Annotations 2015	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
DG(15:0/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EHD1	Pathway Commons Protein-Protein Interactions	1.0	null
H3K27me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(20:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
E2F6_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(14:1(9Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HDAC6	ENCODE Transcription Factor Targets	1.0	null
GOSR2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:0/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
IST1	Pathway Commons Protein-Protein Interactions	1.0	null
NOB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.08746
DG(18:4(6Z,9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNX1	Pathway Commons Protein-Protein Interactions	1.0	null
h2o2	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(20:3n9/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1n9/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
GSE142210_4_v_0_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
H3K27me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE227891_5_v_0_ethanol_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
nucleus subputaminalis	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.831688
organic substance metabolic process	GO Biological Process Annotations 2015	1.0	null
DG(18:1(11Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MAX	ENCODE Transcription Factor Targets	1.0	null
DG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
abnormality of the genitourinary system	GWASdb SNP-Phenotype Associations	1.0	0.203074
Rectum adenocarcinoma_READ_TCGA-EI-6883-01A-31R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tretinoin_homo sapiens_gpl6244_gds4180	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DG(20:3(8Z,11Z,14Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAP2B	Pathway Commons Protein-Protein Interactions	1.0	null
18614019-TableS4d	GeneSigDB Published Gene Signatures	1.0	null
CNPY3	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:3n9/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
subthalamic nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.27198
Entorhinal area, lateral part, layer 2a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.25092
DG(16:1(9Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RABAC1	Pathway Commons Protein-Protein Interactions	1.0	null
purine ribonucleoside binding	GO Molecular Function Annotations 2015	1.0	null
DG(18:1(9Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
GSE144484_0_v_3_mllt6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K27me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
increased circulating alkaline phosphatase level	MGI Mouse Phenotype Associations 2023	1.0	null
GSE189653,GSE203344_4_v_3_fluoxetine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Presynaptic endocytic zone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.887
DG(18:1n9/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me2_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A688-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-F6-A8O3-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EPS8	Pathway Commons Protein-Protein Interactions	1.0	null
SNX14	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(6Z,9Z,12Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1n9/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_Fetal Lung	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(18:3(9Z,12Z,15Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE128634,GSE128636_4_v_3_foxo1_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
RHOA	Pathway Commons Protein-Protein Interactions	1.0	null
PIN1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:0/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Developmental disorder of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.506
DG(20:4(5Z,8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE158431_2_v_0_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(16:0/0:0/24:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
VPS4B	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me2_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H3122	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
SNU308	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4715
DG(18:3n3/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
physical disorder	GWASdb SNP-Disease Associations	1.0	1.30255
DG(18:2(9Z,12Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PDCD6IP	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:1(15Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PLEKHA2	Pathway Commons Protein-Protein Interactions	1.0	null
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0258
Ebf2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.9709
DG(18:0/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
dorsolateral part of Lat	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.29422
RBBP5	ENCODE Transcription Factor Targets	1.0	null
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.91231
Stria terminalis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.903
mRNA_KLF4_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
DG(20:2(11Z,14Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RNF139	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3614
PMC7439574-13148_2020_914_MOESM2_ESM.xlsx-log2_fold_change_-2-1280_genes_are_more_than_four-fold_downregulated_in_PRDM8-_-_compared_to_control_PRDM8	Rummagene Transcription Factor Associations 2026	1.0	null
displacement of the external urethral meatus	GWASdb SNP-Phenotype Associations	1.0	2.01405
DG(20:4(5Z,8Z,11Z,14Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
REP15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.35811
DG(18:1n7/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
periventricular stratum of r9Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.18184
nucleus of the central acoustic tract	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16572
DG(20:3n9/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1n9/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
CLN5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70101
HCC70	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38338
Anteroventral preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.13109
DG(14:0/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(24:1(15Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE100863,GSE100864_3_v_0_tet2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE131161_1_v_0_rarres1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:0/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/20:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
PITPNA	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_Colonic Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
reuniens nucleus, main part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.14161
RAD21	ENCODE Transcription Factor Targets	1.0	null
DG(24:0/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_Brain Inferior Temporal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
purine nucleotide binding	GO Molecular Function Annotations 2015	1.0	null
nad+ kinase activity	GO Molecular Function Annotations 2015	1.0	null
H3K4me3_A549_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE192663_3_v_2_acly_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
RCOR1-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
pyramidal layer of taenia tecta	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.84865
DG(20:2(11Z,14Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
USP8	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
GSE160293_2_v_4_celf6_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:3(6Z,9Z,12Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DMAC2L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43703
DG(18:3n3/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
DG(20:1(11Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
purine ribonucleotide binding	GO Molecular Function Annotations 2015	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-FOXA2_FOXA2	Rummagene Transcription Factor Associations 2026	1.0	null
PLA2G4B	Pathway Commons Protein-Protein Interactions	1.0	null
BCL11B_KO_GDS3178_296_mouse_striatum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
DG(20:3(8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_5047_KO_SYTL3_ERP126655	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
Entorhinal area, lateral part, layer 2b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.19654
GSE154767_2_v_0_adam10_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
SEPT14	Pathway Commons Protein-Protein Interactions	1.0	null
MECP2_KD_GDS4759_334_mouse_E16 primary cortical neuron cultures	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
DG(20:0/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CHMP1B	Pathway Commons Protein-Protein Interactions	1.0	null
KIF20B	Pathway Commons Protein-Protein Interactions	1.0	null
rna-messenger	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(20:2n6/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
mantle zone of r6Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.40077
RANBP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05042
POLR2AphosphoS5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A7R1-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hypospadias	GWAS Catalog SNP-Phenotype Associations 2025	1.0	9.3
SYNE2	Pathway Commons Protein-Protein Interactions	1.0	null
ADP	MW Enzyme Metabolite Associations	1.0	null
CDK5RAP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23807
PRDM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6531
DG(16:1(9Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3n6/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
ADAM10	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:1(11Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.64504
DG(16:1(9Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1n9/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
cell surface receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
EXOC6	Pathway Commons Protein-Protein Interactions	1.0	null
PLEKHA5	Pathway Commons Protein-Protein Interactions	1.0	null
paraventricular nucleus of the hypothalamus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.033
DG(16:1(9Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE165071,GSE165072_1_v_0_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
IPO13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41605
POLR2A_limb_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(24:1n9/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	2.15918
GNAI1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(15:0/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
G alpha (q) signalling events	Reactome Pathways 2014	1.0	null
lipid phosphorylation	GO Biological Process Annotations 2023	1.0	null
Cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.33
PMC10746608-427_2023_709_MOESM4_ESM.xlsx-SOX2_targets_enrichment-Unnamed_34_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:0/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
RAB2A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_erythroblast_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(18:1n7/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
protein kinase c-activating g-protein coupled receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
COCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles	1.0	null
CENPV	Pathway Commons Protein-Protein Interactions	1.0	null
C1orf210	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15374
layer 2 of ERCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.06197
DG(22:1(13Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CatSper complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.657
H3K4me3_lung_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(24:0/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5602
DG(18:0/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
internal granular layer of CbHCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.91884
Paraflocculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.81893
DG(24:0/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CD33+_Myeloid	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.09112
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.5095
DG(22:0/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
VPS25	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GPCR downstream signaling	Reactome Pathways 2014	1.0	null
DG(24:1(15Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
KMH-2	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
DG(18:1(9Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0285
ZFYVE1	Pathway Commons Protein-Protein Interactions	1.0	null
POLR2AphosphoS5_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
USH1C	Pathway Commons Protein-Protein Interactions	1.0	null
NCIH747	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63278
PMC6718408-41467_2019_11884_MOESM9_ESM.xlsx-YAP1_RELA_DEGs_mice_human-Human_Gene_RELA	Rummagene Transcription Factor Associations 2026	1.0	null
PrefrontalCortex	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.11471
COX7A2L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15518
acylglycerol metabolic process	GO Biological Process Annotations 2025	1.0	null
A_CA_04_2009_7dayMOI-10^3_None_GSE37569	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.67015
DG(22:4(7Z,10Z,13Z,16Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAN	Pathway Commons Protein-Protein Interactions	1.0	null
superficial stratum of r4Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.31511
MFM-223	COSMIC Cell Line Gene CNV Profiles	1.0	2.15726
DG(18:1n7/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GNB1	Pathway Commons Protein-Protein Interactions	1.0	null
FLOT1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:0/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(14:0/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CHMP5	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(5Z,8Z,11Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE181966_0_v_3_has2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(24:0/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r9 part of paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.49812
ATG5	Pathway Commons Protein-Protein Interactions	1.0	null
MAFK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0482
DG(20:3(8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
increased circulating cholesterol level	MGI Mouse Phenotype Associations 2023	1.0	null
GLYR1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE172490_5_v_1_junb_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
SNAI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09481
GSE177041_0_v_1_fabp3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE150134_1_v_0_fluorouracil_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CDC42BPB	Pathway Commons Protein-Protein Interactions	1.0	null
PMC9235320-mmc2.xlsx-ST9_eQTL-MR-results-Unnamed_1_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
DG(18:3(9Z,12Z,15Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Cryptorchidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.66
GPC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24789
dorsal endopiriform nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.21099
BCCIP	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_16115_KO_Map3k12_SRP157873	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	3.10715
risk	GeneRIF Biological Term Annotations	1.0	null
DG(15:0/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
ITK	Kinase Library Tyrosine Kinome Atlas	1.0	97.51
DG(20:1(11Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GOSR1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:1n7/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RACGAP1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(15:0/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r3 part of cochlear sensory column	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.24996
DG(20:0/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
purine nucleoside binding	GO Molecular Function Annotations 2015	1.0	null
CLTC	Pathway Commons Protein-Protein Interactions	1.0	null
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24551
SYK	Pathway Commons Protein-Protein Interactions	1.0	null
Placental insufficiency	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.082
r8 part of inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-3.6211
MICOS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.621
DG(22:1n9/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(5Z,8Z,11Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE212299_2_v_1_abi3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE107505_1_v_2_nanog_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
P300-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
FU97	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18367
PPP1R9B	Pathway Commons Protein-Protein Interactions	1.0	null
SMAD4	Pathway Commons Protein-Protein Interactions	1.0	null
RANBP1	Pathway Commons Protein-Protein Interactions	1.0	null
PA(16:0/16:0)	HMDB Metabolites of Enzymes	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HW-7491-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(14:0/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
EZH2_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Perturb_6671_KO_KLB_SRP386785	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
abnormal genital system morphology	GWASdb SNP-Phenotype Associations	1.0	0.318813
PMC12368524-Supplementary_materials.pdf-33-DZIP1_DZIP1	Rummagene Transcription Factor Associations 2026	1.0	null
GTF2F2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10327
mbl2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.805
CMK115	CCLE Cell Line Gene CNV Profiles	1.0	1.77472
DG(18:1(9Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC6335596-mmc2.xlsx-RNA-seq_Day_12_GATA6_Het-Unnamed_12_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
PMC10140619-mmc5.xlsx-Rank_Beta1-Beta3-Gene_BHLHE22	Rummagene Transcription Factor Associations 2026	1.0	null
DG(24:0/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE193993_5_v_3_sstr2_human	RummaGEO Gene Perturbation Signatures	1.0	null
AIDA	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
anterior hypothalamic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.07595
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n7/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
lateral nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.889636
DG(20:3(8Z,11Z,14Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n7/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SCAMP2	Pathway Commons Protein-Protein Interactions	1.0	null
HOXB6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.94591
adenyl nucleotide binding	GO Molecular Function Annotations 2015	1.0	null
Scrotum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.594
DG(18:3(6Z,9Z,12Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
RARA::RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4029
DG(16:0/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DCTN2	Pathway Commons Protein-Protein Interactions	1.0	null
pineal_day	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.830062
MDAMB361	CCLE Cell Line Gene CNV Profiles	1.0	2.09596
DG(20:1n9/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
GSE178113,GSE178116_0_v_1_atrx_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-7471-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(24:0/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(16:0/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
GSE216043_11_v_6_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CALR	Pathway Commons Protein-Protein Interactions	1.0	null
TBP_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
subcallosal cingulate gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.916611
DG(20:0/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
isthmic liminal reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04583
POLG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68588
TAF1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(14:1n5/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
Perineuronal net	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.572
Corpus epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.946
DG(20:3(8Z,11Z,14Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GIGYF2	Pathway Commons Protein-Protein Interactions	1.0	null
PRKCD	Pathway Commons Protein-Protein Interactions	1.0	null
periventricular stratum of Hb	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.76715
Disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.556
DG(22:2(13Z,16Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/22:0)	HMDB Metabolites of Enzymes	1.0	null
PDS5A	Pathway Commons Protein-Protein Interactions	1.0	null
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:3(5Z,8Z,11Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
cerebralcortex	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.19385
CREB1_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(14:0/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
PPP5C	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_heart_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:2(11Z,14Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NAPG	Pathway Commons Protein-Protein Interactions	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-CS-5390-01A-02R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(22:2(13Z,16Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_cardiac mesoderm_hg19_8	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:2(11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DYNC1H1	Pathway Commons Protein-Protein Interactions	1.0	null
GAA	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1(13Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Crus 2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.72378
mRNA_GATA3_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
496100288_HIP_no dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.17226
GSE142210_11_v_7_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
SLAIN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69929
lower limb region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.988227
bed  nucleus of stria terminalis, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.06139
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST12-Unnamed_8_KLF6	Rummagene Transcription Factor Associations 2026	1.0	null
GSE126345_4_v_5_hcrt_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ATP6V1B2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSK3B	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1(9Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Secondary spermatocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.854
BEST2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88952
emboliform nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.868796
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Hypospadias	CTD Gene-Disease Associations	1.0	2.88009
GSE148252_1_v_6_npas4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K27me3_fibroblast of lung_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PHB2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(6Z,9Z,12Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
septal nuclei, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.32015
DG(18:1n7/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
POLR2A_HGPS cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dorsomedial hypothalamic nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.54388
Perturb_4743_KD_Rpap1_SRP071014	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
DG(16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PSMD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18143
PLEKHH1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ZNF350	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64222
GSE180525,GSE180528_2_v_3_tbx3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.79685
intermediate stratum of r6BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.02611
MYC_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:3n9/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of PCPD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23123
ISOC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57314
GSE206502_2_v_1_igf2bp1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
abnormality of the urinary system	GWASdb SNP-Phenotype Associations	1.0	0.311185
Perturb_14646_KO_Ezh2_SRP269210	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
DG(22:0/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
PHB	Pathway Commons Protein-Protein Interactions	1.0	null
H3K27me3_brain_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.8744
RAB33B	Pathway Commons Protein-Protein Interactions	1.0	null
TBX2-33478486-IMR90-HUMAN-LUNG	ChEA Transcription Factor Targets 2022	1.0	null
DG(20:2(11Z,14Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5519-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(16:0/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3n9/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1n9/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
Postpiriform transition area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.08228
DG(18:0/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
KIF5B	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:1(11Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Ovary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.4358
DG(14:0/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Signal Transduction	Reactome Pathways 2014	1.0	null
H3K4me3_cortical plate_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
CREB1	ENCODE Transcription Factor Targets	1.0	null
DG(14:0/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PRKAB1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:4n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48255
H3K4me1_Neurosphere Cultured Cells Cortex Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EF-01A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
721_B_lymphoblasts	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.928109
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0717
H3K27me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCIH650	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00401
Gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.094
MIM complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.531
DG(22:0/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-7300-01A-21R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me1_brain_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
RPLP0	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05561
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF175	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30722
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19764
DG(16:0/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
Fat-nk cell	Tabula Sapiens Gene-Cell Associations	1.0	0.297499
OSBP	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_cardiac mesoderm_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CH157MN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36419
PORCN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54394
HSC-3	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
ATP6V1C2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(15:0/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Th-1 cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.71
perifornical nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.975826
BTG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11129
NCIH727	CCLE Cell Line Gene CNV Profiles	1.0	1.42017
H3K4me3_olfactory bulb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
POLR2AphosphoS5_neural cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(16:1n7/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2(11Z,14Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
143B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.18917
DG(20:1(11Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(24:1n9/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
EXOC2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
GTF2F1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE118766_2_v_0_ifng_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CMK	CCLE Cell Line Gene CNV Profiles	1.0	1.40229
r4 part of dorsal cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.20609
r6 part of the cochlear column	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.40134
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976791
DG(22:2n6/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
CLDND2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00535
DG(20:3n9/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900799
Penile Hypospadias	DisGeNET Gene-Disease Associations	1.0	null
DG(15:0/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
ADAM19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.654
DG(22:2(13Z,16Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45Z-01A-21R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(24:0/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
ZNF454	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	140.08
DG(18:3(9Z,12Z,15Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
COV362	CCLE Cell Line Gene CNV Profiles	1.0	1.43164
DG(22:4(7Z,10Z,13Z,16Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979421
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0608
DG(16:1(9Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r6 part of gigantocellular reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09652
SP1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_cerebellum_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:0/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/22:0)	HMDB Metabolites of Enzymes	1.0	null
mantle zone of AOD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.51006
DG(15:0/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RCC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06661
Reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.545
DG(18:4(6Z,9Z,12Z,15Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE241701_2_v_3_daxx_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MVP	Pathway Commons Protein-Protein Interactions	1.0	null
H3K9me3_Neurosphere Cultured Cells Ganglionic Eminence Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Paraflocculus, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.78967
DG(22:0/0:0/24:0)	HMDB Metabolites of Enzymes	1.0	null
SACM1L	Pathway Commons Protein-Protein Interactions	1.0	null
MDAMB361	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.963841
Anterodorsal preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12415
GSE214823,GSE214824_0_v_2_crtc2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(15:0/0:0/15:0)	HMDB Metabolites of Enzymes	1.0	null
JAK1	Pathway Commons Protein-Protein Interactions	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CW-5591-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mantle zone of r6BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.09883
SOX2	ChEA Transcription Factor Targets	1.0	null
DG(20:0/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n7/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
Dent disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
DG(22:2(13Z,16Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_H1 BMP4 Derived Mesendoderm Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MAPRE1	Pathway Commons Protein-Protein Interactions	1.0	null
THAP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13607
DG(22:4(7Z,10Z,13Z,16Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
diacylglycerol metabolic process	GO Biological Process Annotations 2023	1.0	null
DG(20:3(5Z,8Z,11Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
inner SZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.06369
dgk	GeneRIF Biological Term Annotations	1.0	null
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846534
GSE197117_0_v_1_kdm6b_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
mantle zone of r2Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.34819
regulation of body fluid levels	GO Biological Process Annotations 2015	1.0	null
DG(20:2(11Z,14Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PA(18:1(11Z)/18:1(9Z))	HMDB Metabolites of Enzymes	1.0	null
VASP	Pathway Commons Protein-Protein Interactions	1.0	null
phosphatidic acid metabolic process	GO Biological Process Annotations 2025	1.0	null
DG(20:2(11Z,14Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CPS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01609
DG(18:2(9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43842
mantle zone of r7Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.58882
H3K4me3_Panc1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Perturb_13055_Mut_Sik3E13_SRP334442	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.56205
outer SZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.74979
periventricular stratum of r3Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.51529
hsa-miR-409-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23011
GSE150134_1_v_0_scn5a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE129241_4_v_0_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(18:1(11Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE162590_1_v_0_gsx2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-A4IF-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE176008_7_v_3_azacitidine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
M14 melanoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.201
DG(18:0/0:0/18:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SEC23A	Pathway Commons Protein-Protein Interactions	1.0	null
GSE223008_9_v_2_calhm6_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
RPS6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12909
inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.31409
DG(15:0/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/24:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
URGCP	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:0/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
GSE145430_0_v_1_zmat3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
increased circulating HDL cholesterol level	IMPC Knockout Mouse Phenotypes	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-CS-6668-01A-11R-1896-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:1(11Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1n9/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_Brain Anterior Caudate	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE196117_6_v_0_clarithromycin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CREB1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:2(13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
lateral amygdaloid nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.10577
ATM	Pathway Commons Protein-Protein Interactions	1.0	null
SSRP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.64293
DG(20:4(5Z,8Z,11Z,14Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/18:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
496100338_HIP_probable Alzheimer's disease_no TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.68987
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(24:0/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2(13Z,16Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_Duodenum Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE214823,GSE214824_3_v_1_crtc2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
superficial stratum of m2ADL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.14239
DG(15:0/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
GSE180200,GSE180201_2_v_6_qpctl_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:2(13Z,16Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE100102_0_v_5_cgas_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE205163,GSE205164_5_v_7_znf808_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(16:1(9Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EP300	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04117
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.930463
DG(20:4(8Z,11Z,14Z,17Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
VAC14	Pathway Commons Protein-Protein Interactions	1.0	null
YAP1-20516196-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
H3K4me3_brain_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-8105-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(18:2(9Z,12Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_541_OE_EWS/FLI_SRP168620	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	16.6525
layer 1 of ERCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1595
ILKAP	Pathway Commons Protein-Protein Interactions	1.0	null
COPE	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:2(13Z,16Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE211286_1_v_6_tcf12_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
r7 portion of the hypoglossal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.02376
DG(22:1n9/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of AOD	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.50853
r9 (gustatory) part of solitary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24042
indusium griseum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.26268
H3K4me3_BE2C_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE187006_3_v_2_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(14:0/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n7/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-Row_names_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
DG(18:2n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
GSE192663_3_v_5_acly_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
RTN4IP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33931
DG(20:0/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE208350_0_v_1_fgfr1_human	RummaGEO Gene Perturbation Signatures	1.0	null
kappa	GeneRIF Biological Term Annotations	1.0	null
ChIP_H3K27me3_20682450_humanESC	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
SUZ12-20075857-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
GSE100863,GSE100864_2_v_1_tet2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE180525,GSE180528_1_v_0_tbx3_human	RummaGEO Gene Perturbation Signatures	1.0	null
H3K9me3_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(24:1n9/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
CTCF_GM13976_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUZ12_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LN-229	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857497
DG(14:1n5/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-43-2578-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18367
GSE124920_1_v_2_prmt1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
NCIH3255	CCLE Cell Line Gene CNV Profiles	1.0	1.66913
DG(18:2n6/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
TAF4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.12876
DG(20:1(11Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NCI-H650	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
GSE126345_7_v_10_hcrt_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
EXOC4	Pathway Commons Protein-Protein Interactions	1.0	null
SEPT11	Pathway Commons Protein-Protein Interactions	1.0	null
H3K27me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CPNE1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(5Z,8Z,11Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
central gray substance of midbrain, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.825086
DG(18:1(9Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE181513_2_v_1_usp7_human	RummaGEO Gene Perturbation Signatures	1.0	null
periventricular stratum of r6Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27288
GSE193993_0_v_3_sstr2_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_6668_KO_FGFR1/FGFR3/FGFR4_SRP386785	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
PA(16:0/18:2(9Z,12Z))	HMDB Metabolites of Enzymes	1.0	null
RCOR1-19997604-NEURONS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
ACVR2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00313
MAPK3	Pathway Commons Protein-Protein Interactions	1.0	null
ADGRB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.39155
Autism spectrum disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.515
GSE227415_1_v_0_ucp1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RANGAP1	Pathway Commons Protein-Protein Interactions	1.0	null
TXLNA	Pathway Commons Protein-Protein Interactions	1.0	null
gracile nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.18095
HCC3153	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.66306
DG(16:1n7/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
OCT4-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
ZNF768	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.0322
DG(16:0/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
496100443_HIP_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.27078
DG(22:2(13Z,16Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE152432_5_v_2_zrsr2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CPXCR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8539
preoptic region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.84134
DG(18:1n7/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
Perturb_7450_KD_PUM1/PUM2_SRP100771	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	7.06245
USE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66545
DG(14:1(9Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_ES-Bruce4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
MTF2-20144788-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
GSE228430_1_v_3_fabp5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ARF1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE160817_7_v_1_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(14:0/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/0:0/24:0)	HMDB Metabolites of Enzymes	1.0	null
GSE205332_1_v_0_queuine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CLPP_KO_GDS4791_107_mouse_heart	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
DG(18:3(9Z,12Z,15Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
ATM_KD_GSE54268_663_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Copula pyramidis, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.51561
DG(22:5n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
SPTBN1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
G96	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.891407
CHMP2A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SWAP70	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2(9Z,12Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAB8A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:2(13Z,16Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Purkinje cell layer of CbHCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.66582
frontal pole, left, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.32305
GSE155031_6_v_2_dextran_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(15:0/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1(9Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
agranular insular cortex (area Iag)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.979502
UQCC6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25589
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_CD34 Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
VPS51	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:0/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
GSE122425_1_v_0_nsun2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6959-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-HNF1B_HNF1B	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r10 part of gigantocellular reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07059
KIFC1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:1(11Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of ERCx (cortical plate/marginal zone)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02909
DG(22:1(13Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RTN3	Pathway Commons Protein-Protein Interactions	1.0	null
RAB3A_Mutation - D77G point mutation_GDS2483_698_mouse_Hippocampus	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
H3K9me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	145.77
DG(20:3n9/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE232218_1_v_0_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857497
GSE179002_0_v_1_caprin1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MARK2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE144484_0_v_1_mllt6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
RIMS1	Pathway Commons Protein-Protein Interactions	1.0	null
cation binding	GO Molecular Function Annotations 2015	1.0	null
RAB7A	Pathway Commons Protein-Protein Interactions	1.0	null
r1 alar plate	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.74312
DG(16:1(9Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE98579_0_v_1_tfam_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
CHMP1A	Pathway Commons Protein-Protein Interactions	1.0	null
Primary somatosensory area, unassigned, layer 2/3	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.0213
r7 part of nucleus prepositus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.02918
H3K4me2_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982446
PDX1	JASPAR Predicted Transcription Factor Targets	1.0	null
H3K4me1_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.945707
DG(22:0/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
RHEB	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:1n5/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
single-organism process	GO Biological Process Annotations 2015	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-46-6025-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
20460173-ImmPortComprehensiveListofImmune-RelatedGenes	GeneSigDB Published Gene Signatures	1.0	null
CTCF_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PLCG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05768
membrane	GO Cellular Component Annotations 2015	1.0	null
DG(14:1(9Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
JUN-21703547-K562-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.29368
PPP6R3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28427
NCIH1568	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42828
DG(20:2(11Z,14Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
mantle zone of r3Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.25092
Perturb_6669_KO_FGFR3/FGFR4_SRP386785	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	5.41618
DG(22:5(4Z,7Z,10Z,13Z,16Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE216273,GSE216292_14_v_6_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
EI24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22995
KIF4A	Pathway Commons Protein-Protein Interactions	1.0	null
midbrain raphe nuclei, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.03316
central gray substance of midbrain, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.868279
GSE173873_12_v_13_stra8_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
periventricular stratum of r10Lim	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.2987
Fragile X Syndrome	DisGeNET Gene-Disease Associations	1.0	null
GSE211983_1_v_3_nicotine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
GSE133764_1_v_0_chd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ARG	Kinase Library Tyrosine Kinome Atlas	1.0	97.24
GSE154074_1_v_0_bleomycin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
r1 roof plate	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.98014
cerebellum	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.85415
CDK5	Pathway Commons Protein-Protein Interactions	1.0	null
MDAMB134VI	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.15652
RPL23A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64294
Lymphoma_burkitts(Raji)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.97891
NFIX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1927
mRNA_SOX2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
DG(15:0/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39672
DG(20:3n9/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
UMUC3	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
TEC	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1(11Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3n3/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2(11Z,14Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Laterodorsal thalamic nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.642
DG(18:3(9Z,12Z,15Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE196117_1_v_0_clarithromycin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE198165,GSE198166_7_v_10_zfp266_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
17683608-TableS2	GeneSigDB Published Gene Signatures	1.0	null
Perturb_10228_KO_Nfat5_SRP337224	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	9.55516
JHOS2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hypospadias	GWASdb SNP-Phenotype Associations	1.0	2.01405
Rectum adenocarcinoma_READ_TCGA-EI-6508-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE211983_0_v_3_nicotine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-63-A5MB-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ONCODG1	CCLE Cell Line Gene CNV Profiles	1.0	2.36415
DG(20:3(8Z,11Z,14Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE196699_7_v_3_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
496100429_TCx_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.63495
ZNF707	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.446
DG(20:4n3/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
E2F6_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:0/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0717
PXR (PXR:RXR)	MotifMap Predicted Transcription Factor Targets	1.0	null
PMC9585487-NIHMS1838959-supplement-4.xlsx-Downregulated-Table_S3_FOXC1_regulated_genes_FOXC1	Rummagene Transcription Factor Associations 2026	1.0	null
DG(22:0/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1n9/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
CHD3	Pathway Commons Protein-Protein Interactions	1.0	null
VAMP3	Pathway Commons Protein-Protein Interactions	1.0	null
GSE196699_7_v_1_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PDK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22434
DG(22:5(7Z,10Z,13Z,16Z,19Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Hemispheric regions	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.61244
DG(24:1(15Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNX3	Pathway Commons Protein-Protein Interactions	1.0	null
Esophageal epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.665
DG(20:3(5Z,8Z,11Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Major island of Calleja	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03936
DG(16:0/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Kidney Chromophobe_KICH_TCGA-KL-8338-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AP2A1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE107505_3_v_2_nanog_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K27ac_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Choline metabolism in cancer	KEGG Pathways 2026	1.0	null
ARL6IP1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE209938_0_v_1_metformin_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(18:1n9/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Monogenic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.576
DG(18:4(6Z,9Z,12Z,15Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
prepositus hypoglossal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.97244
VZ in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.995078
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51217
H3K9ac_ES-Bruce4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Perturb_13947_KO_CAMTA1_SRP379121	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
DG(14:1n5/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
BAZ1B	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:0/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
KNL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12798
SEPT9	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1n9/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
intracellular signal transduction	GO Biological Process Annotations 2015	1.0	null
GOLPH3	Pathway Commons Protein-Protein Interactions	1.0	null
ACTN4	Pathway Commons Protein-Protein Interactions	1.0	null
central medullary reticular group, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.853015
H3K27me3_megakaryocyte_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(15:0/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EIF2B5	Pathway Commons Protein-Protein Interactions	1.0	null
DG(15:0/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
mantle zone of r6BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04877
Coronary Heart Disease	DisGeNET Gene-Disease Associations	1.0	null
DG(20:3(5Z,8Z,11Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
intermediate stratum of r10BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00787
substantia innominata, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.937506
ZNF780B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17529
GSE205163,GSE205164_2_v_4_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
AKT1S1	Pathway Commons Protein-Protein Interactions	1.0	null
SNF8	Pathway Commons Protein-Protein Interactions	1.0	null
PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Genes_significantly_differentially_expressed_between_H9_and_GATA6_4ins_at_day_3_in_RNA-seq_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TFAP2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	132.813
DG(18:3(9Z,12Z,15Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
KLC2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:1(15Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
dorsal cortical nucleus of inferior colliculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.70895
abnormality of the genital system	GWASdb SNP-Phenotype Associations	1.0	0.295751
Edinger-Westphal nucleus (accessory oculomotor nucleus)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	3.34509
raphe obscurus nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.86925
CTCF_H1-hESC_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
DG(22:0/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE98898_8_v_1_hoxa1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Phosphatidylinositol signaling system	KEGG Pathways 2026	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CADPS2	Pathway Commons Protein-Protein Interactions	1.0	null
GSE180468_1_v_0_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC8567280-EMBR-22-e53014-s008.xlsx-PC3_TIP5_bound_promoter-Unnamed_4_BAZ2A	Rummagene Transcription Factor Associations 2026	1.0	null
CAB39	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_limb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:0/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_Colonic Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41669
DG(18:3n6/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
PBX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86972
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NKX2-4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9252
EZH2	ENCODE Transcription Factor Targets	1.0	null
DG(24:1n9/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(9Z,12Z,15Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
magnocellular (medial) division of MD	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10059
DG(22:5(4Z,7Z,10Z,13Z,16Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC8986528-41586_2022_4598_MOESM6_ESM.xlsx-Fig_4h-LAS1L_KD_upreg_AR	Rummagene Transcription Factor Associations 2026	1.0	null
DG(16:0/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/16:0)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of THyB-V	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.01387
DG(20:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
ARF4	Pathway Commons Protein-Protein Interactions	1.0	null
CP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.27137
DG(20:0/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PA(20:4(5Z,8Z,11Z,14Z)e/2:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_13295_KD_Klf5_SRP307776	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	8.31625
DG(18:0/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
WASL	Pathway Commons Protein-Protein Interactions	1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.0904
SCAMP3	Pathway Commons Protein-Protein Interactions	1.0	null
Nr1h3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.037
H3K4me1_Fetal Brain	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
r6 part of posteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.85759
r3 part of ventral lateral lemniscal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.23917
DG(18:4n3/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
H2AFZ_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE176008_8_v_3_azacitidine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Anterior cingulate area, dorsal part, layer 6a	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00897
DG(18:0/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PA(18:1(9Z)/18:1(9Z))	HMDB Metabolites of Enzymes	1.0	null
Anteroventral periventricular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.05801
CDC42BPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19991
DG(20:3n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
RIF1	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
GSE128634,GSE128636_1_v_3_foxo1_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.96592
ERLIN1	Pathway Commons Protein-Protein Interactions	1.0	null
RANBP17	Pathway Commons Protein-Protein Interactions	1.0	null
POLR2AphosphoS5_neural cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
periventricular stratum of r7BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07816
H3K4me3_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.80838
DG(16:0/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
lateral hypothalamic area, mammillary region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.28944
GSE214823,GSE214824_6_v_7_crtc2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ZNF320	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	156.203
MYC_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:3(5Z,8Z,11Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GORASP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01008
decreased grip strength	IMPC Knockout Mouse Phenotypes	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N5-A4RD-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FNBP1L	Pathway Commons Protein-Protein Interactions	1.0	null
Breast - Mammary Tissue	GTEx Tissue Gene Expression Profiles 2023	1.0	6.28012
DG(15:0/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
184A1N4	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.904875
PRPF40A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11557
ZFP69	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00103
Perturb_1393_KO_Rad9_SRP214104	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	3.69713
Coffin-Lowry syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.427
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
dose-response-relationship-drug	Phosphosite Textmining Biological Term Annotations	1.0	null
abnormality of the lower urinary tract	GWASdb SNP-Phenotype Associations	1.0	1.45387
Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-gene_id_x_CENPX	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE154464_1_v_3_cdk6_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
motor nucleus of trigeminal nerve	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.39207
DG(18:0/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
r3 part of basomedial reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.20441
DG(16:0/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNX4	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DBR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20454
rostral ventrolateral reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3823
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.30552
HTT	Pathway Commons Protein-Protein Interactions	1.0	null
ANXA5	Pathway Commons Protein-Protein Interactions	1.0	null
CEBPB-22108803-LS180-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC10123531-NIHMS1874945-supplement-Table_S6.xlsx-SOX2_BCAT_cobound_peaks-Gene_Name_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
subcellular	Phosphosite Textmining Biological Term Annotations	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-06A-22R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(22:0/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
CPNE3	Pathway Commons Protein-Protein Interactions	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7430-01A-11R-2132-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
facial motor nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.02705
temporal pole, right, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.96388
SCP2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:1(9Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE214823,GSE214824_0_v_1_crtc2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:0/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MQ-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EZH2_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE96777,GSE96778_3_v_2_zbtb4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
T47D	CCLE Cell Line Gene CNV Profiles	1.0	1.57325
DG(16:1n7/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
X-linked hereditary ataxia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Flocculus, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.59141
DG(20:3(8Z,11Z,14Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4n6/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
PAFAH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82456
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
DG(24:0/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1n9/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2(11Z,14Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC10746608-427_2023_709_MOESM4_ESM.xlsx-SOX2_targets_enrichment-Unnamed_24_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
DG(18:3n3/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
Medial preoptic nucleus, lateral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.18712
DG(20:3(8Z,11Z,14Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
mammillary body, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.64722
Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-7591-01A-11R-2081-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(18:2(9Z,12Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-IB-8126-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5K4-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.991362
Organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.096
496100392_HIP_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.2945
mRNA_NIPBL_20720539	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VPS37B	Pathway Commons Protein-Protein Interactions	1.0	null
TNFAIP8	Pathway Commons Protein-Protein Interactions	1.0	null
ARL1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2(9Z,12Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MYOF	Pathway Commons Protein-Protein Interactions	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4ND-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
periventricular stratum of r9BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.68652
SF3B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.032
mantle zone of r4Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.63197
midbrain reticular formation, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.946227
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.99157
testis	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HOOK1	Pathway Commons Protein-Protein Interactions	1.0	null
ARHGAP35	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1n9/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_erythroblast_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:1n9/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(16:0/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-G3-AAV6-01A-21R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE181966_5_v_3_has2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
NOP56	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01203
H3K4me1_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
r7 part of cochlear column	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.58882
DG(24:1(15Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3n6/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
PRKAR2A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:1n5/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
GRB2	Pathway Commons Protein-Protein Interactions	1.0	null
binding	GO Molecular Function Annotations 2015	1.0	null
BL8271 (VPS4B)	NURSA Protein Complexes	1.0	null
GSE153189_2_v_0_stat1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(18:3(6Z,9Z,12Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
YAP1	ChEA Transcription Factor Targets	1.0	null
Glomus cell_Carotid artery_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
GSE214823,GSE214824_6_v_2_crtc2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979421
Crus 1, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.42738
stress	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(5Z,8Z,11Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CTNND1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(8Z,11Z,14Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_6250_KO_Ago2_SRP041835	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
SNU119	CCLE Cell Line Gene CNV Profiles	1.0	1.33883
SDF4	Pathway Commons Protein-Protein Interactions	1.0	null
r10 part of nucleus gracilis	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.16344
DG(22:5(4Z,7Z,10Z,13Z,16Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
KLC4	Pathway Commons Protein-Protein Interactions	1.0	null
Postsynaptic endocytic zone	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.973
DG(20:4n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
Paraflocculus, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.7713
GSE180951_2_v_0_bleomycin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(24:0/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
ATP6V0D1	Pathway Commons Protein-Protein Interactions	1.0	null
MAPK8	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
Crus 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.47038
GSE217541,GSE217543_0_v_2_tet1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE234334,GSE234336_1_v_0_zhx1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(18:1n7/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
EPS8L3	Pathway Commons Protein-Protein Interactions	1.0	null
medial habenular nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.40254
Paramedian lobule, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.2401
DG(18:4n3/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
LGMN	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_Penis Foreskin Keratinocyte Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Signal Transduction	Reactome Pathways 2024	1.0	null
DG(22:1(13Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.832409
DG(24:0/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
transferase activity	GO Molecular Function Annotations 2015	1.0	null
DG(20:3(5Z,8Z,11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64374
AP3D1	Pathway Commons Protein-Protein Interactions	1.0	null
BL5895 (MAP4K4)	NURSA Protein Complexes	1.0	null
lateral hypothalamic area, tuberal region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.19652
DG(16:1n7/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
PMC10140619-mmc5.xlsx-Beta3_ConVsBSL-Gene_BHLHE22	Rummagene Transcription Factor Associations 2026	1.0	null
SCFD2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.5926
DG(16:0/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE180468_3_v_0_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE217405_3_v_2_egfr_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
superficial stratum of r2Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.3878
Perturb_17397_KO_Ring1_SRP321271	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-11.7881
SFT2D3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1n9/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/22:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_cardiac mesoderm_hg19_7	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Fragile X syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.217
DG(18:0/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
kinase activity	GO Molecular Function Annotations 2015	1.0	null
COPB1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:4n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
GSE154767_4_v_0_adam10_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MT-CO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11643
DG(18:0/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
Perturb_17759_KO_Lin9_SRP221087	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-15.1236
Flocculus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.49976
DG(18:3(9Z,12Z,15Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HCC44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70908
abnormal locomotor behavior	MGI Mouse Phenotype Associations 2023	1.0	null
DG(20:1(11Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE179880_7_v_5_e2f4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
HDQ-P1	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
DG(15:0/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
Perturb_4992_KO_Mettl5_SRP268611	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-2.46351
r5 part of dorsal cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.50311
PMC9950457-mmc3.xlsx-GRHL2_overexpression_DOWN-gene_GRHL2	Rummagene Transcription Factor Associations 2026	1.0	null
GSE189653,GSE203344_2_v_1_fluoxetine_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(20:0/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n7/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
Perturb_8448_KD_ABL1_SRP212071	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
CNOT6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43729
DOLK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18633
STX16	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1(13Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
Perturb_14224_KO_Tcf12_SRP392331	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	7.67326
ANXA6	Pathway Commons Protein-Protein Interactions	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
DG(16:0/0:0/18:0)	HMDB Metabolites of Enzymes	1.0	null
GSE233548_3_v_0_plscr1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FCF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03469
DG(20:2(11Z,14Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_58_KO_Gadd45a/Gadd45b_SRP187210	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	1.63707
medial part of r6B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.04914
superficial stratum of r6BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.20612
DG(18:4(6Z,9Z,12Z,15Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
SMEK1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1(13Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE137177_2_v_0_folic acid_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
UM-UC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35931
DG(14:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3n6/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
Liver Carcinoma	DisGeNET Gene-Disease Associations	1.0	null
TRIM24	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PLEKHG3	Pathway Commons Protein-Protein Interactions	1.0	null
Disease	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.042
TRIP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69189
CTNNB1	Pathway Commons Protein-Protein Interactions	1.0	null
STX4	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
BACH1	ENCODE Transcription Factor Targets	1.0	null
H3K4me1_ES-Bruce4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
SAR1A	Pathway Commons Protein-Protein Interactions	1.0	null
adrenal gland	GTEx Tissue Gene Expression Profiles	1.0	0.916397
DG(18:2(9Z,12Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(18:1(11Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAPGEF4	Pathway Commons Protein-Protein Interactions	1.0	null
GSE129241_1_v_2_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(18:3n3/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
SCFD1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1(9Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-D6-8568-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(14:1n5/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
SFTPC_KO_GSE35989_48_mouse_lung (type II cells)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
DG(18:3(6Z,9Z,12Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857497
H3K27me3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(18:1(9Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
cortex of cerebellar hemisphere	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.87083
coagulation	GO Biological Process Annotations 2015	1.0	null
DG(14:0/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
BIN1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
zinc	Phosphosite Textmining Biological Term Annotations	1.0	null
INTS12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81346
DG(18:1n7/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
GSE203158_1_v_15_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
X-linked dominant disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.147
DG(20:0/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
LC1SQSF	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92896
CCDC174	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.7632
RUNX2	ChEA Transcription Factor Targets	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of r7Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.44843
DG(18:4n3/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
MAX_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAB18	Pathway Commons Protein-Protein Interactions	1.0	null
KDM5A	ENCODE Transcription Factor Targets	1.0	null
lateral habenular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.12554
496100584_HIP_probable Alzheimer's disease_no TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.40204
DG(20:1n9/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
phosphatidic acid biosynthetic process	GO Biological Process Annotations 2025	1.0	null
DG(15:0/0:0/22:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
periventricular stratum of r8BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.00329
DG(18:1n9/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2n6/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
GSE235701,GSE261434_2_v_3_enasidenib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Physical disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.048
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.4131
anion binding	GO Molecular Function Annotations 2015	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE101336_1_v_3_decitabine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
TSG101	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01088
DG(16:0/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
Perturb_4651_KO_Tip55_SRP134924	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	9.87799
PA(16:0/18:1(11Z))	HMDB Metabolites of Enzymes	1.0	null
EXOC5	Pathway Commons Protein-Protein Interactions	1.0	null
SYNJ2BP	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:0/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
H3K27ac_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
small molecule binding	GO Molecular Function Annotations 2015	1.0	null
regulation of cellular process	GO Biological Process Annotations 2015	1.0	null
DG(20:1(11Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE154074_5_v_0_bleomycin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
PMC10746608-427_2023_709_MOESM4_ESM.xlsx-SOX2_targets_enrichment-Unnamed_133_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
DG(16:0/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
metal ion binding	GO Molecular Function Annotations 2015	1.0	null
PMC7940623-41467_2021_21725_MOESM11_ESM.xlsx-Extended_data_table_9_regulons-POU4F1_extended_POU4F1	Rummagene Transcription Factor Associations 2026	1.0	null
BET1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE90710_1_v_0_med13_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
TPX2	Pathway Commons Protein-Protein Interactions	1.0	null
FDPS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01949
ARL2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SK23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2724
KIF2A	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_HEK293_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
STAMBPL1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(9Z,12Z,15Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
SLC18A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13708
DG(14:1n5/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982446
DG(20:1n9/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
RUBCN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18333
H3K27me3_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r9 part of gigantocellular reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0873
GSE210580_0_v_12_rag2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
lateral portion of the shell	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.855195
DG(20:4(8Z,11Z,14Z,17Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
KDM2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10307
POLRMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69011
GSE128634,GSE128636_2_v_0_foxo1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Parastrial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.249
PMC7064337-elife-51373-supp1.xlsx-EZH2_targets_shPHF19-List_of_2084_genes_marked_by_EZH2_ChIPseq_after_PHF19_KD_shPHF19_AR	Rummagene Transcription Factor Associations 2026	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:4n3/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	28.9951
INCA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.29791
DG(14:1(9Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
hand-foot-genital syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.517
RALA	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:0/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.930463
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RFX5	ENCODE Transcription Factor Targets	1.0	null
DG(24:0/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2(13Z,16Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
cos-cells	Phosphosite Textmining Biological Term Annotations	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41Q-01A-11R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RMND1	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_6670_KO_FGFR4_SRP386785	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	7.71678
DG(14:1(9Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Dysarthria	DisGeNET Gene-Disease Associations	1.0	null
DG(16:1(9Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.167
CAMSAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6663
DG(20:2(11Z,14Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.832409
HCC2218	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.989229
superficial stratum of r10Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.40234
ACOT11	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1n7/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
SEPT10	Pathway Commons Protein-Protein Interactions	1.0	null
diacylglycerol metabolic process	GO Biological Process Annotations 2025	1.0	null
DG(18:2(9Z,12Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_iPS DF 19.11	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MAPK8IP3	Pathway Commons Protein-Protein Interactions	1.0	null
POLR2A_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mRNA_EP400_22196727	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12591
GOPC	Pathway Commons Protein-Protein Interactions	1.0	null
CSTB_KO_GSE47516_18_mouse_brain (P7 cerebellum, P30 cerebellum, cerebellar granule cells)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
DG(14:0/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
phosphorylation	GO Biological Process Annotations 2015	1.0	null
IPO5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7122
DG(18:4(6Z,9Z,12Z,15Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
KDM4A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(18:3(6Z,9Z,12Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PDCD6	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(5Z,8Z,11Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
NR1H4::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3281
H3K4me1_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HSC3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
DG(20:0/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
SIGMAR1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1(11Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.91556
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979421
DG(18:3n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
WASF2	Pathway Commons Protein-Protein Interactions	1.0	null
GSE228413_2_v_3_mavs_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
H3K4me3_retinal pigment epithelial cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_HepG2_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
DG(18:3(6Z,9Z,12Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
MYH9	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:1n5/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
response to oxidative stress	GO Biological Process Annotations 2015	1.0	null
transferase activity, transferring phosphorus-containing groups	GO Molecular Function Annotations 2015	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE175883_0_v_1_dis3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
mRNA_CDX2_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
GSE159728,GSE159730_0_v_1_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K27me3_Pancreatic Islets	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE216273,GSE216292_0_v_6_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(15:0/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(5Z,8Z,11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNX5	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1(13Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE116930,GSE116935_1_v_6_hes7_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(24:0/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GPRC5A	Pathway Commons Protein-Protein Interactions	1.0	null
SNU5	CCLE Cell Line Gene CNV Profiles	1.0	1.60013
DG(22:5(7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Crus 2, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.64135
ANXA2	Pathway Commons Protein-Protein Interactions	1.0	null
r6 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.27334
r3 part of parvicellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.5158
intermediate stratum of r9BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.16545
platelet activation	GO Biological Process Annotations 2015	1.0	null
DG(24:0/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_Neurosphere Cultured Cells Cortex Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PMC10746608-427_2023_709_MOESM4_ESM.xlsx-SOX2_targets_enrichment-Unnamed_171_SOX2	Rummagene Transcription Factor Associations 2026	1.0	null
RAB5A	Pathway Commons Protein-Protein Interactions	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-VB-A8QN-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
nucleoside binding	GO Molecular Function Annotations 2015	1.0	null
cysteine	Phosphosite Textmining Biological Term Annotations	1.0	null
GSE131887_1_v_3_doxycycline_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(16:0e/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC8528285-pbio.3001085.s010.xlsx-Fig_7E-MAX_WT_TESTES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
H3K4me3_H7_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:0/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1n9/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
CCNQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.58327
DG(22:1(13Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ATP-dependent diacylglycerol kinase activity	GO Molecular Function Annotations 2025	1.0	null
hypospadias	GeneRIF Biological Term Annotations	1.0	null
DG(16:0/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNAI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6766
GDI2	Pathway Commons Protein-Protein Interactions	1.0	null
cingulum bundle, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.01331
nucleus accumbens, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.80035
DG(22:5n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
YAP1-20516196-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
interpeduncular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.58609
DG(20:5(5Z,8Z,11Z,14Z,17Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CLPP_KO_GDS4791_537_mouse_testis	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
DG(24:0/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_Colonic Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.071
CTCF_SK-N-SH_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ANKRD13A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05891
DG(20:4(5Z,8Z,11Z,14Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
POLR2A_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Balanitis xerotica obliterans	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.052
DG(22:0/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
ABT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09299
DG(16:0/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
single-multicellular organism process	GO Biological Process Annotations 2015	1.0	null
DG(22:1(13Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE137914_4_v_5_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE225647_1_v_3_srsf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SEPT7	Pathway Commons Protein-Protein Interactions	1.0	null
SQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54109
DG(22:4(7Z,10Z,13Z,16Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ChIP_SOX2_19030024	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
GSE137914_2_v_5_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.7297
DG(20:2n6/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
TFAP2E	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.304
layer VI of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.933085
ATP6V1A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
RSF1	Pathway Commons Protein-Protein Interactions	1.0	null
VPS33A	Pathway Commons Protein-Protein Interactions	1.0	null
Hmgn1_KO_GDS5010_406_mouse_liver	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
DG(20:0/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE130246_2_v_3_enzalutamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QT-A5XN-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE147056_2_v_1_actl6b_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(14:0/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CCT6A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30127
SNPH	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:0/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
Perturb_542_OE_EWSFLI_SRP168621	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	18.2518
fasciola cinerea	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.41549
DG(20:3(8Z,11Z,14Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MAP1LC3B2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98488
periventricular stratum of r9Tr	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.24085
SLC25A33	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ATP	MW Enzyme Metabolite Associations	1.0	null
MOSPD2	Pathway Commons Protein-Protein Interactions	1.0	null
ASPSCR1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NPTXR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41329
neutral lipid metabolic process	GO Biological Process Annotations 2015	1.0	null
DG(14:0/0:0/20:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE211151_1_v_4_progesterone_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(20:3(5Z,8Z,11Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SC-7160 (XBP1)	NURSA Protein Complexes	1.0	null
Pleckstrin homology domain	InterPro Predicted Protein Domain Annotations	1.0	null
DG(14:1(9Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
inner CP in lateral temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.0329
periventricular stratum of DTTh	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0337
CTLL-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.658
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
r9 part of the inferior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.47851
DG(14:1(9Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
posterior cortical nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.999689
DG(18:3(9Z,12Z,15Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNX2	Pathway Commons Protein-Protein Interactions	1.0	null
dgkk	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_B cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
all	GWASdb SNP-Phenotype Associations	1.0	0.037033
Brain Lower Grade Glioma_LGG_TCGA-DB-5279-01A-03R-2347-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
FAM129B	Pathway Commons Protein-Protein Interactions	1.0	null
Taenia tecta, ventral part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
G alpha (q) signalling events	Reactome Pathways 2024	1.0	null
CACYBP	Pathway Commons Protein-Protein Interactions	1.0	null
RAB11B	Pathway Commons Protein-Protein Interactions	1.0	null
abducens nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.909462
DG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
BL1341 (DCLRE1C)	NURSA Protein Complexes	1.0	null
496100582_HIP_probable Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.46999
SNX13	Pathway Commons Protein-Protein Interactions	1.0	null
H3K36me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DAPK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34175
DG(24:1n9/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
ZFPL1	Pathway Commons Protein-Protein Interactions	1.0	null
r5 part of the cochlear column	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.47163
dorsomedial hypothalamic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07426
DG(24:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CMC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4875
inferior olive, medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.49884
DG(18:4(6Z,9Z,12Z,15Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SYTL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16512
layer 2 of AOD cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.39993
DG(18:1(11Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
r6 part of dorsal cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.05415
r7 part of basomedial reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.23562
SKBR3	CCLE Cell Line Gene CNV Profiles	1.0	1.4842
496100393_HIP_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.51394
N1E-115 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.895
GSE137914_4_v_3_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18367
hek293-cells	Phosphosite Textmining Biological Term Annotations	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-EB-A431-01A-11R-A266-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me1_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:0/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
TBC1D4	Pathway Commons Protein-Protein Interactions	1.0	null
Platelet activation, signaling and aggregation	Reactome Pathways 2014	1.0	null
DG(20:0/0:0/24:0)	HMDB Metabolites of Enzymes	1.0	null
lateral orbital frontal cortex (area 12/47)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-3.18317
H3K4me3_heart_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(24:1(15Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
TFRC	Pathway Commons Protein-Protein Interactions	1.0	null
signal	Phosphosite Textmining Biological Term Annotations	1.0	null
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
ANXA3	Pathway Commons Protein-Protein Interactions	1.0	null
POLR2A_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_spleen_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:2(11Z,14Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r4 part of posteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.31611
DG(15:0/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
496100632_HIP_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.59925
DG(18:4(6Z,9Z,12Z,15Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
496100521_HIP_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.01748
lipid metabolic process	GO Biological Process Annotations 2015	1.0	null
central nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.922391
DG(20:3n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
DOCK1	Pathway Commons Protein-Protein Interactions	1.0	null
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.25228
Perturb_13816_KO_Bim/Trp53_SRP187070	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	10.6836
LUDLU1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34077
DG(16:1(9Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2n6/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
Edinger-Westphal nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.942716
H3K4me3_HepG2_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
biological regulation	GO Biological Process Annotations 2015	1.0	null
DG(18:1(11Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SPECC1L	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_Brain Cingulate Gyrus	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
caudal group of intralaminar nuclei, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.14872
H3K4me3_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
cytoplasm	GO Cellular Component Annotations 2015	1.0	null
DG(16:1(9Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Pleckstrin homology-like domain	InterPro Predicted Protein Domain Annotations	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
GSE216043_11_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
RAB14	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_Brain Germinal Matrix	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RABL3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:0/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
PMC7335061-41467_2020_17150_MOESM4_ESM.xlsx-Table_S3-LIN28B_correlates_LIN28B	Rummagene Transcription Factor Associations 2026	1.0	null
MED15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26384
Wt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	94.5161
GSE126345_2_v_3_hcrt_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2871-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
layer 1 of AOD cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.62415
NSA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0623
U2OS	CCLE Cell Line Gene CNV Profiles	1.0	1.93489
GTF2F1	ENCODE Transcription Factor Targets	1.0	null
MCM2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:0/0:0/22:0)	HMDB Metabolites of Enzymes	1.0	null
pleckstrin	Phosphosite Textmining Biological Term Annotations	1.0	null
mantle zone of r5Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.47038
Prader-Willi syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.089
DG(20:3(5Z,8Z,11Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE173201_0_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5LP-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bed nuclei of the stria terminalis, anterior division, magnocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.04455
Intellectual disability	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.49
POLR2AphosphoS5_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE195663_0_v_2_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
EPHA2	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_1300_KO_Foxp1_SRP158103	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-4.11301
DG(20:1(11Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_17364_Mut|OE_Sik3E13_SRP334442	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
496100615_HIP_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.03433
DG(22:4(7Z,10Z,13Z,16Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r6 part of rostral ventromedial reticular area	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.06378
DG(16:1n7/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
layer 4 of ERCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.15864
H2AFZ_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:2n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_cardiac mesoderm_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
GSE148252_7_v_4_npas4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
VPS4A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-37-4129-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE160765_2_v_1_twist1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Perturb_4871_KO_EZH1_SRP095403	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-10.6983
midbrain reticular formation	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.02553
kinase	GeneRIF Biological Term Annotations	1.0	null
plasma membrane	GO Cellular Component Annotations 2015	1.0	null
GSE183335,GSE183351_1_v_0_lin28b_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DIAPH1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE211286_7_v_3_tcf12_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
B4GALT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50155
PC14	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86432
DG(14:0/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(9Z,12Z,15Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE100102_4_v_3_cgas_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
UCHL3	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_1310_KO_Cntnap4_SRP387040	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-3.92662
oxidative	Phosphosite Textmining Biological Term Annotations	1.0	null
NRN1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23869
DG(18:0/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE187006_0_v_1_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
superficial stratum of Ist	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.07487
H3K27me3_megakaryocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GMNN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02182
DG(15:0/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
HDAC2	ENCODE Transcription Factor Targets	1.0	null
DG(14:0/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
lipid kinase activity	GO Molecular Function Annotations 2025	1.0	null
GSE254649_2_v_1_cstf2_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:3n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
MAP2K4_knockdown_62_GSE19091	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	2.99476
Urethra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	2.053
DG(18:1(11Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
GSE218580_1_v_3_fentanyl_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
EMC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43409
AKAP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24174
H3K4me3_Brain Substantia Nigra	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PMC10011543-41419_2023_5707_MOESM4_ESM.xlsx-genes_with_unique_SNP-F5-Thygro-r__CIC-1n_h-r__CIC-2n_h-r_CIC	Rummagene Transcription Factor Associations 2026	1.0	null
central nuclear group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.4151
GRWD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41109
lateral intermediate part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.850115
GSE125862_2_v_1_dexamethasone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
phosphate-containing compound metabolic process	GO Biological Process Annotations 2015	1.0	null
periventricular stratum of r6Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.05459
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAB1A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
COPG1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE192663_1_v_2_acly_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE142210_3_v_0_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
Gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.09
GSE109140_0_v_1_valproic acid_human	RummaGEO Drug Perturbation Signatures	-1.0	null
spinal (inferior) vestibular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.61766
GSE195663_0_v_5_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:1(11Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CLTA	Pathway Commons Protein-Protein Interactions	1.0	null
KIF1A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(15:0/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r2 part of cochlear sensory column	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.34819
Pervasive developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.511
DG(20:1n9/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
RIPK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41479
DG(22:2n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.94929
lateral hypothalamic area, anterior part	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.859002
SKP1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:0/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
ribonucleoside binding	GO Molecular Function Annotations 2015	1.0	null
PTP4A1	Pathway Commons Protein-Protein Interactions	1.0	null
Caput epididymis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.129
H3K4me3_kidney epithelial cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
TJP2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(9Z,12Z,15Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Mood disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.307
GSE112174_5_v_7_runx1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Dendritic spine	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.537
DG(22:2n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Corpus cavernosum penis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.68
SEC22B	Pathway Commons Protein-Protein Interactions	1.0	null
Ebolavirus(ZEBOV)_5day_Liver_None_GSE57214	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.66571
DG(22:4(7Z,10Z,13Z,16Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RT-A6YC-01A-12R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE230263,GSE230265_0_v_1_runx1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Perturb_4218_KO_Ezh2_SRP092451	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	12.8327
GSE203158_0_v_14_aire_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:2(13Z,16Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
496100604_HIP_no dementia_TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.21153
FAM21A	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1(13Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
increased circulating cholesterol level	IMPC Knockout Mouse Phenotypes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CTCF_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE142210_9_v_0_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE205163,GSE205164_2_v_8_znf808_human	RummaGEO Gene Perturbation Signatures	-1.0	null
medial portion of STH	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.26983
Perturb_8647_KO_GATA4_SRP287180	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	16.137
VZ in hypothalamic portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.12567
GSE76425_0_v_3_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
H3K27me3_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(16:0/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE206342_1_v_0_kpna2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(14:0/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2(11Z,14Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
hypospadias	GWASdb SNP-Disease Associations	1.0	2.05009
DG(20:2(11Z,14Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
POLR2A_HepG2_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(14:0/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE153871_5_v_3_cytarabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
H3K4me1_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE131680_1_v_0_macroh2a1_human	RummaGEO Gene Perturbation Signatures	1.0	null
H3K4me3_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:1n9/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
ANLN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58428
PMC5801404__F2	PFOCR Pathway Figure Associations 2024	1.0	null
TUBB2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0325
DG(18:1n9/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/24:0)	HMDB Metabolites of Enzymes	1.0	null
r7 part of paragigantocellular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.22339
GPR120_KO_GDS4830_414_mouse_liver	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
DG(14:0/0:0/18:0)	HMDB Metabolites of Enzymes	1.0	null
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.6917
H3K4me2_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08309
Lateral posterior nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.601
DG(20:1(11Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
midbrain raphe nuclei	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.18432
DG(18:3(6Z,9Z,12Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
layer II of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.7394
STX12	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
NEDD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19907
periventricular stratum of r7Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.27423
Hypospadias	DisGeNET Gene-Disease Associations	1.0	null
LIG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68769
ATG7	Pathway Commons Protein-Protein Interactions	1.0	null
GSE63048_11_v_5_morc1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
STOML2	Pathway Commons Protein-Protein Interactions	1.0	null
PIM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40797
DG(20:0/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CKAP5	Pathway Commons Protein-Protein Interactions	1.0	null
acylglycerol metabolic process	GO Biological Process Annotations 2015	1.0	null
GSE201668_0_v_1_ncor2_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:3(8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Cortical amygdalar area, posterior part, lateral zone, layer 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.00476
DG(20:5(5Z,8Z,11Z,14Z,17Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Perturb_10690_KD_circPRKAA3_SRP372818	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
outer CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.859353
BACH1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(16:1(9Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
NCI-H1793	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17692
ventromedial hypothalamic nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	3.08321
entorhinal cortex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02952
DG(20:3(8Z,11Z,14Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
COPZ1	Pathway Commons Protein-Protein Interactions	1.0	null
CSNK1A1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:1(9Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
Perturb_17760_KO_Lin9_SRP221087	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-7.67212
G292CLONEA141B1	CCLE Cell Line Gene CNV Profiles	1.0	1.65863
navicular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.18773
RASL11A	Pathway Commons Protein-Protein Interactions	1.0	null
ZR75B	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.08296
ZFYVE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32081
DG(20:2(11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
VPS16	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
carbohydrate derivative binding	GO Molecular Function Annotations 2015	1.0	null
DG(18:2(9Z,12Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of r9BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.7063
GOLIM4	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
LMO7	Pathway Commons Protein-Protein Interactions	1.0	null
GSE217541,GSE217543_0_v_1_tet1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
diacylglycerol metabolic process	GO Biological Process Annotations 2015	1.0	null
VZ in dorsomedial parietal cortex (area 7m)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.22494
PRKAG1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE128634,GSE128636_4_v_5_foxo1_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(24:0/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE161302,GSE161304_1_v_0_enzalutamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5J3-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
STX5	Pathway Commons Protein-Protein Interactions	1.0	null
PGAM5	Pathway Commons Protein-Protein Interactions	1.0	null
mantle zone of ERCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.02952
ELMO3	Pathway Commons Protein-Protein Interactions	1.0	null
frontal pole, right, inferior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.31495
src	Phosphosite Textmining Biological Term Annotations	1.0	null
STARD10	Pathway Commons Protein-Protein Interactions	1.0	null
dorsal motor nucleus of the vagus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.896752
mRNA_ESX1_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	-1.0	null
DG(18:1(9Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-NFE2L2_NFE2L2	Rummagene Transcription Factor Associations 2026	1.0	null
BCAP29	Pathway Commons Protein-Protein Interactions	1.0	null
superficial stratum of r9Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05472
GSE239373_0_v_1_mettl3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
nucleus of the diagonal band, left, vertical division	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.34204
DG(20:0/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
CEP97	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.21443
AHNAK	Pathway Commons Protein-Protein Interactions	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7370-01A-11R-2132-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(18:0/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41782
ZNF282	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5416
DG(22:2(13Z,16Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GRIPAP1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE81803,GSE81912_0_v_5_fmr1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:0/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2(13Z,16Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A6WH-01A-12R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SCARB2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ventrolateral periolivary nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.24808
medial part of r9B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.63598
DG(15:0/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DNM2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1n9/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
SMC4	Pathway Commons Protein-Protein Interactions	1.0	null
catalysis	Phosphosite Textmining Biological Term Annotations	1.0	null
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.975228
PA(18:0/18:2(9Z,12Z))	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
trachea	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.888636
CD34+	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.988806
DG(20:4n6/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/20:0)	HMDB Metabolites of Enzymes	1.0	null
Ansiform lobule	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.58274
GSE189305_1_v_0_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(16:0/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SAFB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29882
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
H2AFZ_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_cerebellum_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:2(13Z,16Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ATP6V1E1	Pathway Commons Protein-Protein Interactions	1.0	null
PPP1CB	Pathway Commons Protein-Protein Interactions	1.0	null
ACAP2	Pathway Commons Protein-Protein Interactions	1.0	null
GNAI3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:1n9/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
Clumsiness - Motor Delay	DisGeNET Gene-Disease Associations	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:4n3/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
habenula (old epithalamus)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.15351
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5258-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
multicellular organismal process	GO Biological Process Annotations 2015	1.0	null
primary metabolic process	GO Biological Process Annotations 2015	1.0	null
DG(14:0/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(5Z,8Z,11Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5n3/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
ERGIC3	Pathway Commons Protein-Protein Interactions	1.0	null
JUN	ChEA Transcription Factor Targets	1.0	null
Phospholipase D signaling pathway	KEGG Pathways 2026	1.0	null
RBX1	Pathway Commons Protein-Protein Interactions	1.0	null
mt3	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.214
VPS18	Pathway Commons Protein-Protein Interactions	1.0	null
496100489_HIP_possible Alzheimer's disease_no TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.20667
Penis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.66
SP1	ENCODE Transcription Factor Targets	1.0	null
EXOC8	Pathway Commons Protein-Protein Interactions	1.0	null
CTCF_LNCaP clone FGC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VAMP7	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:2n6/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1n9/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TMED10	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PDCD4	Pathway Commons Protein-Protein Interactions	1.0	null
PMC4387713-supp_gad.255984.114_Table_S5.xlsx-S5B-Up_H3K4me3_DPY30_KD-Unnamed_12_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GSE172490_5_v_3_junb_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
medial superior olive	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.19112
DG(16:1n7/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(20:4n3/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
SEPT8	Pathway Commons Protein-Protein Interactions	1.0	null
TFAP2A	JASPAR Predicted Transcription Factor Targets	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.81009
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983172
RHOT2	Pathway Commons Protein-Protein Interactions	1.0	null
STXBP2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:0/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
GSE217405_0_v_1_egfr_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:0/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE196962_2_v_6_parg_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(15:0/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
ZMAT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36001
DG(20:3n9/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58177
GSE199255,GSE199356_3_v_1_pds5a_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
TXLNG	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Crus 1, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.50838
DG(22:4(7Z,10Z,13Z,16Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RELB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8158
H3K9me3_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(14:0/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE193993_1_v_3_sstr2_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:1n9/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
IPCEF1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:1n5/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
LGE-VZ border region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.07231
RPS14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0833
DG(15:0/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
superficial stratum of r7BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38285
GSE216273,GSE216292_0_v_1_palbociclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(24:1n9/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
CDK1	Pathway Commons Protein-Protein Interactions	1.0	null
Periventricular hypothalamic nucleus, posterior part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.12545
NDNL2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:1(9Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Messenger ribonucleoprotein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.116
Tubercle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.739
abnormality of the male genitalia	GWASdb SNP-Phenotype Associations	1.0	0.418242
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JU-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE264621_1_v_6_secretin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(24:1(15Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
ERLIN2	Pathway Commons Protein-Protein Interactions	1.0	null
MYO7B	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/0:0/14:0)	HMDB Metabolites of Enzymes	1.0	null
ISG20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.11573
EW8	CCLE Cell Line Gene CNV Profiles	1.0	1.48802
DG(22:5n3/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_Neurosphere Cultured Cells Ganglionic Eminence Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE225656_0_v_1_tsc2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(18:0/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3n9/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
GSE188870,GSE188871_1_v_5_kat7_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Hypospadias	dbGAP Gene-Trait Associations	1.0	1.44094
MAX_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE92965_0_v_1_tamoxifen_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
FADU	CCLE Cell Line Gene CNV Profiles	1.0	1.87203
YY1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_lung_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE80098,GSE80366_0_v_5_progesterone_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(20:1(11Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
hemostasis	GO Biological Process Annotations 2015	1.0	null
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-2.09964
PMC6879454-Data_Sheet_1.xlsx-AA_in_vitro-Unnamed_4_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
PMC6335596-mmc2.xlsx-RNA-seq_Day_12_GATA6_Het-Genes_significantly_differentially_expressed_between_H9_and_GATA6_4ins_at_day_12_in_RNA-seq_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
NKX2-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1159
ventral tuberomammillary nucleus, superficial part (histaminergic)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.01387
CTU1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.16424
Kidney Chromophobe_KICH_TCGA-KN-8423-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PIK3R1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2(9Z,12Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TRAPPC3	Pathway Commons Protein-Protein Interactions	1.0	null
Platelet activation, signaling and aggregation	Reactome Pathways 2024	1.0	null
DG(22:2(13Z,16Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PET complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.638
Flocculus, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.40341
DG(16:1n7/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
RAP1A	Pathway Commons Protein-Protein Interactions	1.0	null
Physical disorder	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.042
layer V of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.22243
PA(18:1(9Z)/18:1(11Z))	HMDB Metabolites of Enzymes	1.0	null
Perturb_6284_OE_CPEB3_SRP364591	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-20.0
DG(20:4(8Z,11Z,14Z,17Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Hemostasis	Reactome Pathways 2024	1.0	null
DG(20:4n6/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-FOXA3_FOXA3	Rummagene Transcription Factor Associations 2026	1.0	null
DG(16:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Gastroschisis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.14
periventricular stratum of r4Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33139
H3K4me3_retinal pigment epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(18:0/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
VPS35	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(6Z,9Z,12Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(8Z,11Z,14Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_erythroblast_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
lateral parabrachial nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03764
GSE189653,GSE203344_5_v_3_fluoxetine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(24:0/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
Whole Blood	GTEx Tissue Gene Expression Profiles 2023	1.0	3.18535
GSE217405_0_v_1_osimertinib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Perturb_6251_KO_Dicer_SRP041835	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	20.0
nih 3T3	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.00767
DG(20:1n9/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
para-abducens nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.07703
PMC11250262-41588_2024_1798_MOESM4_ESM.xlsx-ST18_665_top_menarche_genes-gene_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
periventricular stratum of r4Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.20609
INSM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.1667
DUSP3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3n9/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
principal sensory nucleus of trigeminal nerve, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.08512
EP300_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(18:3n6/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
BCAS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.33414
periventricular stratum of r2Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16126
inner SZ in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.897164
GSE151412_2_v_3_sorafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_13216_KO_Dnmt3b_SRP063529	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
mantle zone of Hb	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.15555
DG(20:4(8Z,11Z,14Z,17Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TJP1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(5Z,8Z,11Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
KNS60	CCLE Cell Line Gene CNV Profiles	1.0	1.32749
DG(22:5(4Z,7Z,10Z,13Z,16Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
frontal pole, right, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.47883
DG(14:0/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-NFYB_NFYB	Rummagene Transcription Factor Associations 2026	1.0	null
cell activation	GO Biological Process Annotations 2015	1.0	null
SEC61A1	Pathway Commons Protein-Protein Interactions	1.0	null
GSPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93617
GSE180200,GSE180201_5_v_11_qpctl_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
oxide	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5n3/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
SEC31A	Pathway Commons Protein-Protein Interactions	1.0	null
increased circulating alkaline phosphatase level	IMPC Knockout Mouse Phenotypes	1.0	null
DG(20:2n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
TBCA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30548
TRRAP	Pathway Commons Protein-Protein Interactions	1.0	null
GRHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3179
ZNF253	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.71189
DG(18:3(9Z,12Z,15Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
REST	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.891
DG(18:4(6Z,9Z,12Z,15Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.645
DG(22:4(7Z,10Z,13Z,16Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Glans penis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.563
DG(18:0/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Mental Retardation, X-Linked 63	CTD Gene-Disease Associations	1.0	2.88009
GSE180200,GSE180201_5_v_1_qpctl_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:3(9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SDC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22342
DG(14:0/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
A4 noradrenergic cell group	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.09117
DG(20:2(11Z,14Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
r9 part of nucleus gracilis	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.01892
DG(16:1(9Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PPP1CA	Pathway Commons Protein-Protein Interactions	1.0	null
H3K27me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7056-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SGK3	Pathway Commons Protein-Protein Interactions	1.0	null
Translation repressor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.712
DG(22:1(13Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ALDH1A2_KO_GDS4836_289_mouse_posterior embryonic brain	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2(13Z,16Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45U-01A-12R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ADD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68417
DG(18:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
18614019-TableS4c	GeneSigDB Published Gene Signatures	1.0	null
TIPIN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45584
Eukaryotic translation initiation factor 4F complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.836
LDB1-21186366-BM-HSCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
GSE122215,GSE122217_5_v_4_peg10_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:1n9/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_brown adipose tissue_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE128634,GSE128636_2_v_5_foxo1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Corpus cavernosum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.508
PA(16:0e/18:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_H1 Derived Neuronal Progenitor Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Autistic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.365
Hypospadias	DISEASES Experimental Gene-Disease Association Evidence Scores 2025	1.0	2.042
ventrolateral preoptic nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.67816
SARS-CoV MA15_Day7-PFU-10^4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.28711
DG(18:3(9Z,12Z,15Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.017
swine	Phosphosite Textmining Biological Term Annotations	1.0	null
GSE143782_7_v_11_calcitriol_human	RummaGEO Drug Perturbation Signatures	1.0	null
CNN2	Pathway Commons Protein-Protein Interactions	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-S9-A6WL-01A-21R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K36me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:1n9/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3(5Z,8Z,11Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_14906_KD_LIN41_SRP032743	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-18.4815
DG(18:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
lateral hypothalamic area, anterior region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.49561
GSE196962_4_v_3_parg_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE189653,GSE203344_2_v_0_fluoxetine_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
UNC93B1	Pathway Commons Protein-Protein Interactions	1.0	null
nucleoside phosphate binding	GO Molecular Function Annotations 2015	1.0	null
DG(20:3(5Z,8Z,11Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(9Z,12Z,15Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2868-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(20:1(11Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC4387713-supp_gad.255984.114_Table_S5.xlsx-S5E-Down_H3K27me3_DPY30_KD-Unnamed_12_AR	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE160817_4_v_1_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE244072_10_v_8_tfeb_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(18:0/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
FRMPD3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2n6/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
GNAS	Pathway Commons Protein-Protein Interactions	1.0	null
GSE137914_2_v_3_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:3(9Z,12Z,15Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
mantle zone of CbH	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.82004
External male genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.676
SP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.987997
DG(18:2(9Z,12Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAB17	Pathway Commons Protein-Protein Interactions	1.0	null
GSE108675_3_v_0_slc1a4_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857497
Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	InterPro Predicted Protein Domain Annotations	1.0	null
ZW10	Pathway Commons Protein-Protein Interactions	1.0	null
GSE217405_3_v_2_osimertinib_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
H3K4me3_HEK293_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
superficial stratum of r3BL	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.23917
ASAH1	Pathway Commons Protein-Protein Interactions	1.0	null
CREB1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PITX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2154
H3K27me3_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:0/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
GSE240645_3_v_2_u90926_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:2(9Z,12Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RCOR1	ChEA Transcription Factor Targets	1.0	null
IQGAP3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1(11Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
medial part of r8B	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12389
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CLPP_KO_GSE40207_392_mouse_Testis	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
DG(18:1(9Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
r9 part of basomedial reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.15969
GSE205550,GSE205552_2_v_1_doxorubicin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
globus pallidus, internal segment, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.824989
choroid plexus of the fourth ventricle	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.89585
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HCC38	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09288
TAP1	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_HL-60_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(18:1(11Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
STAT3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
SLC30A9	Pathway Commons Protein-Protein Interactions	1.0	null
GSE199255,GSE199356_0_v_1_pds5a_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
superficial stratum of r5Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.267
DG(18:1(9Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r9 part of external cuneate nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.05395
GSE126345_9_v_10_hcrt_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(16:0/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
BCAP31	Pathway Commons Protein-Protein Interactions	1.0	null
GSE140997_10_v_1_nsun6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(16:1n7/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7H5-01B-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
rostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.03319
TRIB1_KO_GDS2944_555_mouse_Macrophages	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
H3K4me1_ES-E14_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
YY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7898
DG(20:4(8Z,11Z,14Z,17Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
salivarygland	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.4154
NCI-H2009	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91268
DG(15:0/0:0/16:0)	HMDB Metabolites of Enzymes	1.0	null
GSE65617_5_v_1_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:3(5Z,8Z,11Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
STAG1	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_17761_KO_Lin9/Sav1_SRP221087	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-6.8764
DG(20:2(11Z,14Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PLEKHF2	Pathway Commons Protein-Protein Interactions	1.0	null
TFAP2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	133.027
DG(15:0/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
ABR	Pathway Commons Protein-Protein Interactions	1.0	null
ARHGAP8	Pathway Commons Protein-Protein Interactions	1.0	null
NDUFAB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27963
DG(18:3(6Z,9Z,12Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n7/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
GSE200159_1_v_0_setd4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
r8 portion of the hypoglossal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.67552
mRNA_SOX9_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
DG(18:1(11Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PLIN3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
GSE137914_4_v_1_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SAP30_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE183335,GSE183351_3_v_0_lin28b_human	RummaGEO Gene Perturbation Signatures	1.0	null
EP300_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(15:0/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE111660_1_v_3_prdm16_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:0/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1n9/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
mammillary body, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.50959
DG(20:1n9/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
Glycerophospholipid metabolism	KEGG Pathways 2026	1.0	null
DG(16:1n7/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.982446
NFIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.4696
DG(20:1(11Z)/20:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EZH2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GPCR downstream signalling	Reactome Pathways 2024	1.0	null
RAB6A	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_cortical plate_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_13058_Mut|OE_Sik3E13_SRP334442	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	3.0475
TAF1	ENCODE Transcription Factor Targets	1.0	null
ion binding	GO Molecular Function Annotations 2015	1.0	null
STAM	Pathway Commons Protein-Protein Interactions	1.0	null
mantle zone of r8BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.12469
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE153871_4_v_2_cytarabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
nucleus accumbens, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.12433
DG(20:0/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
VZ in midcingulate neocortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.28932
SP in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.833942
midbrain reticular formation, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.894135
DG(20:2n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
GSE214823,GSE214824_5_v_1_crtc2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE196699_2_v_3_prdm16_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(14:1(9Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Bmi1_Deficiency_GDS4816_323_mouse_Primary lung cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
CHD7_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
metabolic process	GO Biological Process Annotations 2015	1.0	null
DG(18:0/0:0/14:1n5)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
DGKQ	Pathway Commons Protein-Protein Interactions	1.0	null
r2 part of anteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.38669
Brain Lower Grade Glioma_LGG_TCGA-DU-6393-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE216273,GSE216292_14_v_7_palbociclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(20:1(11Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_K562_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(24:0/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Autosomal dominant Robinow syndrome 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.547
JUN-21703547-K562-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Hypospadias	HuGE Navigator Gene-Phenotype Associations	1.0	null
EIF2B3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:2(11Z,14Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE213153_1_v_0_ulixertinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
XPOT	Pathway Commons Protein-Protein Interactions	1.0	null
oculomotor nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.999351
H3K27me3_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.954427
DG(22:2n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
SUZ12-20075857-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
COMMD3	Pathway Commons Protein-Protein Interactions	1.0	null
CSNK2A2	Pathway Commons Protein-Protein Interactions	1.0	null
Crus 2, granular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.81436
t60-adrenal_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	1.42923
H3K4me1_small intestine_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
ChIP_MTF2_20144788	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
CEP95	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20623
RPMI7951	CCLE Cell Line Gene CNV Profiles	1.0	1.59467
H3K27me3_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
periventricular stratum of r6BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.88257
DG(24:0/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
VIPAS39	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/0:0/15:0)	HMDB Metabolites of Enzymes	1.0	null
TAF1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(24:1n9/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
RAB5B	Pathway Commons Protein-Protein Interactions	1.0	null
ZFP14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.5438
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Disorder of sexual development	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.471
subthalamic nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.906302
DG(18:3(6Z,9Z,12Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CHD4	Pathway Commons Protein-Protein Interactions	1.0	null
caudal subdivision of medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.4384
DG(22:2(13Z,16Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K9me3_Rectal Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
mRNA_SOX2_17515932	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
DG(18:0/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
medial subdivision of area 10	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.46063
SEL1L	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:2(11Z,14Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4n6/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
Perturb_5566_KO_Sorbs2_SRP221026	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-6.52127
BT549	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.760232
Lateral dorsal nucleus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.764
pancreas	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.829938
MCF10F	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.983736
GSE216273,GSE216292_0_v_7_palbociclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
multiform (lateral) division of MD	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.933844
STX17	Pathway Commons Protein-Protein Interactions	1.0	null
Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9IO-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF530	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.3094
GOLT1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24781
Rectum adenocarcinoma_READ_TCGA-EI-6512-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE211177,GSE211178_9_v_3_ets1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
cingulate gyrus, retrosplenial part, left, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.17461
DG(20:4(8Z,11Z,14Z,17Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DOCK6	Pathway Commons Protein-Protein Interactions	1.0	null
hydrogen-peroxide	Phosphosite Textmining Biological Term Annotations	1.0	null
DG(22:0/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
GSE262134_0_v_1_dnajc12_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAP1GDS1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:1n9/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MAD2L1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
AU565	CCLE Cell Line Gene CNV Profiles	1.0	1.40977
periventricular stratum of r7Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1115
RABL6	Pathway Commons Protein-Protein Interactions	1.0	null
E2F6	ENCODE Transcription Factor Targets	1.0	null
plasma	Phosphosite Textmining Biological Term Annotations	1.0	null
GSE126345_4_v_3_hcrt_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(16:0/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
RAB9A	Pathway Commons Protein-Protein Interactions	1.0	null
abnormal locomotor behavior	IMPC Knockout Mouse Phenotypes	1.0	null
GSE100102_4_v_5_cgas_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE205163,GSE205164_3_v_7_znf808_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:0/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2n6/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
ZWILCH	Pathway Commons Protein-Protein Interactions	1.0	null
SHB	Pathway Commons Protein-Protein Interactions	1.0	null
Syntrophin complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.764
abnormal external genitalia	GWASdb SNP-Phenotype Associations	1.0	0.484473
DG(22:0/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RRAS2	Pathway Commons Protein-Protein Interactions	1.0	null
VPS29	Pathway Commons Protein-Protein Interactions	1.0	null
ECSIT	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2(9Z,12Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CISD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18105
DG(20:3n9/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2(11Z,14Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE120413,GSE120447_4_v_5_bap1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(16:1(9Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DOCK5	Pathway Commons Protein-Protein Interactions	1.0	null
DNMBP	Pathway Commons Protein-Protein Interactions	1.0	null
Sarcoma_SARC_TCGA-IF-A4AK-01A-21R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(14:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ZAP70	Kinase Library Tyrosine Kinome Atlas	1.0	98.47
PMC12035842-ijmsv22p2139s1.pdf-5-ATF4_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
H3K27me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17198
DG(20:5(5Z,8Z,11Z,14Z,17Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_4721_KO_Setd5_SRP117752	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
DG(20:3n6/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
GSE158431_2_v_3_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6022-01A-21R-1686-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HLA-C	Pathway Commons Protein-Protein Interactions	1.0	null
Perturb_8305_KO_GALNT1_ERP012063	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	13.022
diacylglycerol	GeneRIF Biological Term Annotations	1.0	null
Specific developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.414
DG(22:2(13Z,16Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
POLR2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11377
basal nucleus of meynert, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.32534
GAK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92231
ventral reuniens nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.0104
r10 part of solitary complex	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.21428
DG(18:1n7/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
GSE130081,GSE130082_0_v_1_neil2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K27me3_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
DG(16:1(9Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
ATP6V1H	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Paramedian lobule	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.34294
H3K4me1_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE230744,GSE237803_5_v_2_hira_human	RummaGEO Gene Perturbation Signatures	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-NA-A4QV-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DYNC1LI2	Pathway Commons Protein-Protein Interactions	1.0	null
PMC11811132-41598_2025_89334_MOESM5_ESM.xlsx-PHOX2B-fromNode_PHOX2B	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
catalytic activity	GO Molecular Function Annotations 2015	1.0	null
r5 part of posteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.26748
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.401
STX18	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1n9/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901509
DG(18:1(9Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
parvicellular part of Lat	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.1952
KRTCAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00641
phosphotransferase activity, alcohol group as acceptor	GO Molecular Function Annotations 2023	1.0	null
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.937488
PELO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03973
DG(22:0/0:0/16:1n7)	HMDB Metabolites of Enzymes	1.0	null
RAB35	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_SK-N-SH_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
CACNA1H	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43191
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857497
DG(18:0/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NSF	Pathway Commons Protein-Protein Interactions	1.0	null
USF2	JASPAR Predicted Transcription Factor Targets	1.0	null
ULK3	Pathway Commons Protein-Protein Interactions	1.0	null
ZNF416	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1304
DG(14:1(9Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.101
midline nuclear complex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.4036
GSE183994_1_v_0_scml2_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(20:3(5Z,8Z,11Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_Penis Foreskin Fibroblast Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(20:4n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
abnormality of the penis	GWASdb SNP-Phenotype Associations	1.0	1.45387
DG(24:0/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAB19	Pathway Commons Protein-Protein Interactions	1.0	null
brain	GTEx Tissue Gene Expression Profiles	1.0	1.16641
DG(18:1n9/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
PPP2CA	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2(9Z,12Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
paravermis of cerebellum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.20654
BLOC1S6	Pathway Commons Protein-Protein Interactions	1.0	null
RSU1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE187006_0_v_2_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE156923_0_v_3_rbmx_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE96777,GSE96778_1_v_0_zbtb4_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE149880_0_v_3_tamoxifen_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:3(6Z,9Z,12Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
posterior hypothalamic area, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.82079
DG(18:3n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
organic cyclic compound binding	GO Molecular Function Annotations 2015	1.0	null
CLPP_KO_GDS4791_374_mouse_Testies	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
SUZ12	ENCODE Transcription Factor Targets	1.0	null
Diacylglycerol kinase, catalytic domain	InterPro Predicted Protein Domain Annotations	1.0	null
GSE221955_3_v_2_igfbp2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE137177_1_v_0_folic acid_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
pituitary	GTEx Tissue Gene Expression Profiles	1.0	2.1848
GSE100102_0_v_3_cgas_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K56ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
FGD4	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_8650_KD_GATA4_SRP287180	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	20.0
DG(16:0/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
SNAP23	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:0/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ZNF669	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.26
GSE145249_0_v_2_ppm1g_human	RummaGEO Gene Perturbation Signatures	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2843-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02232
DG(18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r10 portion of the hypoglossal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.35633
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
dorsal part of alar p2	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.15555
Prostate adenocarcinoma_PRAD_TCGA-CH-5751-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
medial subdivision of central nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.15044
GSE226397_0_v_1_cystine_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
periventricular stratum of r10BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.11592
DG(22:4(7Z,10Z,13Z,16Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
UROD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6512
PMC6853299-pbio.3000476.s011.xlsx-Fig_4A-RA_812_genes_expression_ratio_in_ZF_and_OF_CREBZF	Rummagene Transcription Factor Associations 2026	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1n9/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
PPM1A	Pathway Commons Protein-Protein Interactions	1.0	null
GSE153189_2_v_3_interferon gamma_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
LIN7C	Pathway Commons Protein-Protein Interactions	1.0	null
outer CP in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.72802
DG(24:0/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
FLNB	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(6Z,9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE233548_2_v_0_plscr1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
VTA1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(5Z,8Z,11Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE137177_2_v_4_folic acid_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC8020666-pnas.2015855118.sd09.xlsx-LPS_4_human_DRSG_higherRes-Hg_gene_id_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
MCMBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60213
FU97	CCLE Cell Line Gene CNV Profiles	1.0	1.52749
DG(16:0/0:0/18:1n9)	HMDB Metabolites of Enzymes	1.0	null
phosphorylation	GO Biological Process Annotations 2023	1.0	null
ZBTB33	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4738
DG(24:0/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1n7/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80871
496100515_HIP_dementia_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.28495
Anterior cingulate area, dorsal part, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.40912
PLEK2	Pathway Commons Protein-Protein Interactions	1.0	null
GSE171401_1_v_0_adnp_human	RummaGEO Gene Perturbation Signatures	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-6992-01A-11R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
POLR3C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07064
DG(22:0/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
diacylglycerol kinase activity	GO Molecular Function Annotations 2023	1.0	null
DG(14:0/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
tyrosine-phosphorylated	Phosphosite Textmining Biological Term Annotations	1.0	null
Perturb_14839_KO_Kdm4a_SRP101992	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-1.99072
DG(22:2(13Z,16Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE142210_4_v_7_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE182921_0_v_1_slit2_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:1n9/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HUH7	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
DG(18:0/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
SCAMP1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:0/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
CLU	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48712
disease	GWASdb SNP-Disease Associations	1.0	0.038508
SUZ12	ChEA Transcription Factor Targets	1.0	null
DG(20:3(8Z,11Z,14Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
glycerophospholipid biosynthetic process	GO Biological Process Annotations 2025	1.0	null
DG(18:2n6/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
Rectal Mucosa Donor 31	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	0.986372
GSE201042_2_v_4_ptpmt1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
CLPP_KO_GSE40207_378_mouse_Testies	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
MTOR	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:1(9Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
rhombomere 1	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.54643
r2 part of dorsal cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.16082
Signaling by GPCR	Reactome Pathways 2024	1.0	null
Perturb_17361_Mut_Sik3E13_SRP334442	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-3.32776
Sex chromatin	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.617
lipid	Phosphosite Textmining Biological Term Annotations	1.0	null
CTBP2	ENCODE Transcription Factor Targets	1.0	null
DG(22:1(13Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
mRNA_DLX3_19796622	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
DG(14:0/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A2EL-01A-12R-A18C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
atp binding	GO Molecular Function Annotations 2015	1.0	null
DG(18:1(9Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NCIH1651	CCLE Cell Line Gene CNV Profiles	1.0	2.20946
CDK4	Pathway Commons Protein-Protein Interactions	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.832409
r4 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.33093
Neuronal dense core vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.999
anterior olfactory area, dorsal part	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.50953
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YO-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AKT1_OE_GDS2308_508_mouse_heart	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
SMC2	Pathway Commons Protein-Protein Interactions	1.0	null
GSE94814_2_v_0_reck_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE147056_0_v_1_actl6b_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
MAX_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
morphine_mus musculus_gpl6246_gse17731	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.831712
DG(22:0/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03684
DG(20:0/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GBF1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:3(6Z,9Z,12Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983172
Depressive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.092
DG(14:1(9Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ZNF263	ENCODE Transcription Factor Targets	1.0	null
molecular layer of CbHCx	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.85388
ASH2L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.39185
periventricular stratum of r9Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.18688
DG(20:4(5Z,8Z,11Z,14Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE139911_0_v_4_dnmt3a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(14:0/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ELK4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.89
r10 part of basomedial reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.06378
DG(24:0/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r10 part of external cuneate nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.40379
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19764
GSE168807_0_v_8_dnmt3a_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
IBA57	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02623
DG(16:0/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1n9/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE203329_0_v_1_mettl5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
MTF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.2162
DG(18:4(6Z,9Z,12Z,15Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H2AC16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05081
DG(24:0/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
COPB2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:1n9/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3n6/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
acylglycerol metabolic process	GO Biological Process Annotations 2023	1.0	null
SEC61B	Pathway Commons Protein-Protein Interactions	1.0	null
TOM1	Pathway Commons Protein-Protein Interactions	1.0	null
Mitochondrial derivative	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.665
COG3	Pathway Commons Protein-Protein Interactions	1.0	null
SCPEP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83801
DG(20:2n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/18:1(11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
KLC1	Pathway Commons Protein-Protein Interactions	1.0	null
inferior olivary complex, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.07454
H3K27me3_erythroblast_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:0/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
DANG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41072
DG(18:1n9/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
Severe Intellectual Disability	DisGeNET Gene-Disease Associations	1.0	null
r8 part of basomedial reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.57486
DG(20:3(5Z,8Z,11Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K9ac_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1143	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80935
GSE157592_1_v_0_tet2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:1(13Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NCAPG	Pathway Commons Protein-Protein Interactions	1.0	null
RAB3GAP1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(14:0/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
ANXA11	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:0/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1n9/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
CTCF_Caco-2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE158431_5_v_7_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(16:1n7/0:0/22:2n6)	HMDB Metabolites of Enzymes	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-7371-01A-11R-2016-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
bonemarrow	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.07269
r6 part of nucleus prepositus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.88257
DG(14:1n5/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
CISD2	Pathway Commons Protein-Protein Interactions	1.0	null
GSE224599_0_v_1_tfcp2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
SNCA_KO_GDS4153_443_mouse_Striatum - 6 months	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
TLN1	Pathway Commons Protein-Protein Interactions	1.0	null
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976791
H3K9me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
nerve-tissue-proteins	Phosphosite Textmining Biological Term Annotations	1.0	null
H3K4me3_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GSE168171,GSE168173_0_v_1_ddx41_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	118.743
Signaling by GPCR	Reactome Pathways 2014	1.0	null
DG(14:1(9Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
HCC89	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18535
PKN2	Pathway Commons Protein-Protein Interactions	1.0	null
MIER3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08711
DG(20:3n9/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(20:2(11Z,14Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
embryonic stem no feeder	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
DG(22:2(13Z,16Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
MAX_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:1n9/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_iPS DF 6.9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-5358-01A-01R-1514-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hypospadias	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.992
DG(20:0/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1n9/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08101
r5 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29224
H3K4me3_ES-E14_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(20:3(8Z,11Z,14Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE142210_2_v_0_panobinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
GH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.61544
BAZ1A	Pathway Commons Protein-Protein Interactions	1.0	null
mantle zone of r9BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.63424
DG(18:0/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_13098_OE_Dux_SRP220068	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	10.4222
internal segment of globus pallidus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.2653
cochlear nuclei	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.03112
BL8561 (CAMSAP1L1)	NURSA Protein Complexes	1.0	null
DG(20:2(11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EPHA4	Kinase Library Tyrosine Kinome Atlas	1.0	98.2
Perturb_15262_KO_Sall2_SRP171624	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-20.0
Copula pyramidis, molecular layer	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.4048
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18367
H3K4me3_SK-N-SH_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
GSE152050,GSE152052_1_v_0_arid1a_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
raphe magnus nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.08696
DG(18:1n7/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
Periurethral tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.847
GSE168587,GSE168752_3_v_1_tp53_human	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K4me3_cardiac mesoderm_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
Perturb_6636_KO_SATB1_ERP024525	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-12.5834
H3K4me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(14:1(9Z)/20:4(5Z,8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
posterior hypothalamic area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.44445
GSE114992,GSE114993_7_v_11_irf5_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QT-A5XO-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
r3 part of dorsal cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.62416
RABEP1	Pathway Commons Protein-Protein Interactions	1.0	null
HGS	Pathway Commons Protein-Protein Interactions	1.0	null
FOXL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0269
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.29157
DG(18:3n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
stratum pyramidale of caudal CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.13061
SIN3A	ENCODE Transcription Factor Targets	1.0	null
GSE137914_0_v_5_tet3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(16:0/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me1_iPS DF 6.9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
membrane	Phosphosite Textmining Biological Term Annotations	1.0	null
SMC3	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(18:0/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
RINT1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1n9/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
Attention deficit hyperactivity disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.108
H3K27me3_small intestine_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
occipital pole, left, lateral aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.0091
variants	GeneRIF Biological Term Annotations	1.0	null
r7 part of the posteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.44843
DG(15:0/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
heterocyclic compound binding	GO Molecular Function Annotations 2015	1.0	null
DG(15:0/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(9Z,12Z,15Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE214823,GSE214824_4_v_1_crtc2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(24:1(15Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
ZBTB14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.8685
DG(24:1(15Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
HCFC1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:3(8Z,11Z,14Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
TAF1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
supraoptic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.898937
TKT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01026
DG(22:0/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE180185_9_v_10_setbp1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ZWINT	Pathway Commons Protein-Protein Interactions	1.0	null
anterior hypothalamic area, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.825532
r9 portion of vagal motor nucleus (postmigratory)	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.18352
GSE211286_1_v_3_tcf12_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:2n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
ventromedial hypothalamic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.75848
496100520_HIP_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.41288
Noonan syndrome 7	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.389
DG(16:0/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE217541,GSE217543_3_v_2_tet1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
H3K4me2_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE218580_1_v_0_fentanyl_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Hemostasis	Reactome Pathways 2014	1.0	null
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22467
GSE71529,GSE71558_1_v_0_doxorubicin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Unnamed_13_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CDAN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39501
MAX_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(18:0/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:0/0:0/22:0)	HMDB Metabolites of Enzymes	1.0	null
GATA4_KO_GDS3486_483_mouse_jejunum	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
GSE188869,GSE188871_1_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
H3K4me1_Breast Myoepithelial Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
dorsal motor nucleus of the vagus (vagal nucleus)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.14296
DG(18:3(9Z,12Z,15Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CCND1	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE208350_4_v_1_fgfr1_human	RummaGEO Gene Perturbation Signatures	1.0	null
IQGAP1	Pathway Commons Protein-Protein Interactions	1.0	null
nucleotide binding	GO Molecular Function Annotations 2015	1.0	null
DG(20:2n6/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
GSE224294_3_v_2_ngly1_human	RummaGEO Gene Perturbation Signatures	1.0	null
DG(20:3(5Z,8Z,11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_1064_KO_Esr1_SRP168132	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-3.35031
IZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.943188
TOP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.04611
blood coagulation	GO Biological Process Annotations 2015	1.0	null
DG(18:1(11Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE138001_2_v_3_rorb_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:1(11Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r7 part of the dorsal cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.27423
DST	Pathway Commons Protein-Protein Interactions	1.0	null
SOX2-19030024-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
DG(18:0/0:0/22:1n9)	HMDB Metabolites of Enzymes	1.0	null
Primary somatosensory area, unassigned, layer 4	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.13328
VPS26A	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me3_cardiac mesoderm_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:1n9/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
SOX2-19030024-MESCS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
496100579_HIP_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.91028
PTPN1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE164757,GSE164759_1_v_3_trametinib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Effects of PIP2 hydrolysis	Reactome Pathways 2014	1.0	null
DG(18:3n6/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null
GSE151119_2_v_0_hsf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
corpus callosum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.40862
DG(16:0/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:2(9Z,12Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Secondary motor area, layer 6b	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.52267
DG(24:1(15Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:1(15Z)/22:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
YY1	ENCODE Transcription Factor Targets	1.0	null
ATP6V1D	Pathway Commons Protein-Protein Interactions	1.0	null
PMC10709143-41556_2023_1271_MOESM9_ESM.xls-Up_in_PAX7--Target_name_PAX7	Rummagene Transcription Factor Associations 2026	1.0	null
ANXA1	Pathway Commons Protein-Protein Interactions	1.0	null
paracentral lobule, anterior part, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.873451
Perturb_13294_KO_Stk40_SRP182898	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-5.24847
GSE171311_0_v_1_ellagic acid_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:2(9Z,12Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5703-01A-11R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ANKRD11	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:1(15Z)/20:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
cellular lipid metabolic process	GO Biological Process Annotations 2015	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:4n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
SIN3A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE189356_5_v_6_dexamethasone_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(18:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
CDIPT	Pathway Commons Protein-Protein Interactions	1.0	null
CDC42	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
lipid modification	GO Biological Process Annotations 2023	1.0	null
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08309
HBA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03572
DG(18:3(9Z,12Z,15Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
VAV2	Pathway Commons Protein-Protein Interactions	1.0	null
H3K4me1_Neurosphere Cultured Cells Ganglionic Eminence Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GSE217115_3_v_0_alectinib_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:1(9Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
TULP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53984
HDAC2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(20:3n6/0:0/22:5n6)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(11Z)/22:1(13Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
FOXA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.61754
DG(14:1(9Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC8528285-pbio.3001085.s010.xlsx-Fig_S7B-GENE_LIST_UPLOADED_TO_ENRICHR_MAX_WT_TESTES_874_GENES_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
substantia innominata, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.14188
DG(20:0/0:0/22:4n6)	HMDB Metabolites of Enzymes	1.0	null
KRAP_Deficiency_GDS3527_566_mouse_Brown adipose tissues	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70I-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K4me3_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
IGR1	CCLE Cell Line Gene CNV Profiles	1.0	1.73163
GSE135439_0_v_1_pax5_human	RummaGEO Gene Perturbation Signatures	1.0	null
CLPP_KO_GDS4791_104_mouse_testis	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
Npas4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.927
H3K27me3_ES-Bruce4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PMC5801404__F2	PFOCR Pathway Figure Associations 2023	1.0	null
DG(20:3(8Z,11Z,14Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
SC-232 (POU2F1)	NURSA Protein Complexes	1.0	null
GSE113817_0_v_1_bach1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ZNF485	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01103
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01206
DG(14:1(9Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:0/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_brown adipose tissue_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(14:1(9Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:2(13Z,16Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5n3/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
PMC11682006-13105_2024_1045_MOESM1_ESM.pdf-19-PITX2_PITX2	Rummagene Transcription Factor Associations 2026	1.0	null
DG(20:3(5Z,8Z,11Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3n3/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
DCTN3	Pathway Commons Protein-Protein Interactions	1.0	null
g-protein coupled receptor signaling pathway	GO Biological Process Annotations 2015	1.0	null
PA(P-16:0e/18:2(9Z,12Z))	HMDB Metabolites of Enzymes	1.0	null
NUDC	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.11
DG(18:3(9Z,12Z,15Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE203158_5_v_15_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SG in frontal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.943918
DG(20:1(11Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
LRCH4	Pathway Commons Protein-Protein Interactions	1.0	null
cerebellar hemisphere	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.82093
ANXA4	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:2(11Z,14Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(6Z,9Z,12Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Bipolar disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.188
DG(22:0/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
regulation of biological process	GO Biological Process Annotations 2015	1.0	null
Perturb_13386_OE_p73_SRP069085	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-10.5311
VTI1A	Pathway Commons Protein-Protein Interactions	1.0	null
GNAI2	Pathway Commons Protein-Protein Interactions	1.0	null
MAPK11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48734
cercopithecus-aethiops	Phosphosite Textmining Biological Term Annotations	1.0	null
PMC11336098-41598_2024_70235_MOESM1_ESM.pdf-699-DACH2_DACH2	Rummagene Transcription Factor Associations 2026	1.0	null
type	GeneRIF Biological Term Annotations	1.0	null
DG(18:4(6Z,9Z,12Z,15Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Posterior amygdala	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.783
PIK3C2B	Pathway Commons Protein-Protein Interactions	1.0	null
SOX2_Deficiency_GDS4853_322_human_AZ-521 gastric cancer (GC) cell line - 24 Hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
SP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	118.433
TAGLN2	Pathway Commons Protein-Protein Interactions	1.0	null
posterodorsal tegmental nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.03047
DG(22:5(7Z,10Z,13Z,16Z,19Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
medial (main) part of Med	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.82754
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.891407
DG(24:1(15Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE92965_0_v_1_klf2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.696
PLS1	Pathway Commons Protein-Protein Interactions	1.0	null
GSE145311_0_v_3_glutathione_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
Omphalocele	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.408
superficial stratum of r3Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03464
DG(20:1n9/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
GSE143692_0_v_1_trim8_human	RummaGEO Gene Perturbation Signatures	1.0	null
NUP50	Pathway Commons Protein-Protein Interactions	1.0	null
DG(20:1(11Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:1(11Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
r9 part of parvocellular medial vestibular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.1873
DG(18:1(11Z)/18:3(6Z,9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE151412_2_v_1_sorafenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
PRKDC	Pathway Commons Protein-Protein Interactions	1.0	null
DG(16:0/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_Caco-2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:4(7Z,10Z,13Z,16Z)/20:4(8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
NR4A2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.58
periventricular stratum of r5Co	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.50244
glycerolipid metabolic process	GO Biological Process Annotations 2015	1.0	null
GSE168401_1_v_0_harmine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
H3K4me3_NT2-D1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:2(13Z,16Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PLA2G4A	Pathway Commons Protein-Protein Interactions	1.0	null
Genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.514
BL2416 (RC3H1)	NURSA Protein Complexes	1.0	null
DG(18:2n6/0:0/20:5n3)	HMDB Metabolites of Enzymes	1.0	null
GSE228430_2_v_3_fabp5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(16:0/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
medial habenular nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.81728
single-organism metabolic process	GO Biological Process Annotations 2015	1.0	null
H3K4me3_Brain Anterior Caudate	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DG(18:3(9Z,12Z,15Z)/18:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844462
NAA15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08608
parabigeminal nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	2.02089
biological_process	GO Biological Process Annotations 2015	1.0	null
DG(18:1(9Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(8Z,11Z,14Z,17Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
intracellular part	GO Cellular Component Annotations 2015	1.0	null
PA(16:0/18:1(9Z))	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:0e/2:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
RAB43	Pathway Commons Protein-Protein Interactions	1.0	null
superficial stratum of r7BM	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.58087
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
Nephrotic syndrome type 7	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.45
496100339_HIP_no dementia_TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.1649
MDAMB231	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.21011
DG(18:1(11Z)/24:1(15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GNA11	Pathway Commons Protein-Protein Interactions	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
medioventral part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.02305
SAP30	ENCODE Transcription Factor Targets	1.0	null
IQGAP2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(18:2n6/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/18:4n3)	HMDB Metabolites of Enzymes	1.0	null
STX3	Pathway Commons Protein-Protein Interactions	1.0	null
DG(24:1(15Z)/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Pyloric stenosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.087
DG(18:2(9Z,12Z)/18:2(9Z,12Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE101546_2_v_4_setdb1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(22:2(13Z,16Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(9Z,12Z,15Z)/20:3(5Z,8Z,11Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
AP2B1	Pathway Commons Protein-Protein Interactions	1.0	null
r6 part of basomedial reticular formation	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.37578
Prepuce	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.228
DG(20:3n9/0:0/18:2n6)	HMDB Metabolites of Enzymes	1.0	null
periventricular stratum of r5Ve	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29224
DG(18:3(6Z,9Z,12Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/0:0/22:6n3)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3n6/0:0/20:3n6)	HMDB Metabolites of Enzymes	1.0	null
GSE133087_1_v_0_metformin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DG(18:3(9Z,12Z,15Z)/20:2(11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/0:0/20:4n6)	HMDB Metabolites of Enzymes	1.0	null
mantle zone of the Fc	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-2.41414
Brain Lower Grade Glioma_LGG_TCGA-TM-A84G-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Effects of PIP2 hydrolysis	Reactome Pathways 2024	1.0	null
H3K9me3_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Perturb_5006_KO_BACH1_SRP143680	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-19.2218
DG(20:0/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
EPB41L2	Pathway Commons Protein-Protein Interactions	1.0	null
DG(15:0/0:0/24:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/15:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:0/22:4(7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-6394-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DG(24:1(15Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.9925
DG(20:0/0:0/20:0)	HMDB Metabolites of Enzymes	1.0	null
r10 part of vagal motor nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.29774
Perturb_17303_KO_Tam_SRP126482	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-11.6279
Perturb_4873_KO_EZH2_SRP095403	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-2.64918
Perturb_4217_OE_Hoxa2_SRP092451	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	12.2183
ATP6V1C1	Pathway Commons Protein-Protein Interactions	1.0	null
ZNF93	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	126.014
LAMTOR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7143
DG(18:1n7/0:0/18:1n7)	HMDB Metabolites of Enzymes	1.0	null
DG(14:0/0:0/24:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
EXOC1	Pathway Commons Protein-Protein Interactions	1.0	null
core of nucleus accumbens	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.00568
interpositus (intermediate) nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06588
FIGNL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04323
H3K4me3_BE2C_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
DG(22:2(13Z,16Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE126345_7_v_5_hcrt_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
cellular process	GO Biological Process Annotations 2015	1.0	null
H3K4me3_Brain Cingulate Gyrus	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
subparafascicular nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.45373
DG(22:2(13Z,16Z)/16:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:3n6/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
H3K27me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE165939_2_v_1_poldip2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
LYPD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28413
lipid kinase activity	GO Molecular Function Annotations 2023	1.0	null
HEY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.59874
MAPK7	Pathway Commons Protein-Protein Interactions	1.0	null
r3 part of anteroventral cochlear nucleus	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.03464
GSE203158_12_v_15_aire_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DG(18:1n7/0:0/20:4n3)	HMDB Metabolites of Enzymes	1.0	null
DG(24:0/0:0/18:3n6)	HMDB Metabolites of Enzymes	1.0	null
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33379
DG(22:5(4Z,7Z,10Z,13Z,16Z)/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_14225_KO_Tcf12_SRP392331	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	2.20166
DG(18:0/0:0/20:0)	HMDB Metabolites of Enzymes	1.0	null
DIDO1	Pathway Commons Protein-Protein Interactions	1.0	null
SRMS	Kinase Library Tyrosine Kinome Atlas	1.0	98.38
NRBP1	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:5(5Z,8Z,11Z,14Z,17Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(15:0/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(16:1(9Z)/22:2(13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(18:1(9Z)/18:4(6Z,9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
GSE173873_2_v_13_stra8_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
DG(22:0/24:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:5(4Z,7Z,10Z,13Z,16Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
PMC8986528-41586_2022_4598_MOESM6_ESM.xlsx-Fig_4f-NOL9_KD_upreg_AR	Rummagene Transcription Factor Associations 2026	1.0	null
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35931
CTCF_BE2C_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DYNC1I2	Pathway Commons Protein-Protein Interactions	1.0	null
GSE206400_3_v_4_nusinersen_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
DG(18:1(9Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
CCN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00331
DG(22:5n6/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
VPS33B	Pathway Commons Protein-Protein Interactions	1.0	null
PMC8185471-mmc6.xlsx-up-_and_downregulated_genes-Day_6_SOX15-_-_upregulated_and_downregulated_genes_nearby_shared_FO_and_FC_regions_respectively_Related_to_Figure_6_SOX15	Rummagene Transcription Factor Associations 2026	1.0	null
ARHGEF10L	Pathway Commons Protein-Protein Interactions	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-DU-A76R-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
superficial stratum of TTe	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.84865
superficial stratum of r9BI	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.49812
Perturb_4164_KO_Erbb4_SRP373176	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	1.0	1.51858
BLOC1S5	Pathway Commons Protein-Protein Interactions	1.0	null
DG(22:1(13Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
H3K4me3_limb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
r9 part of nucleus of Roller	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	-1.0	-1.5317
DG(20:1n9/0:0/22:5n3)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
Perturb_8651_KD_GLYR1_SRP287180	PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	-5.94629
GSE76425_0_v_12_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
pallidal islands of Calleja	Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles	1.0	1.50114
VCAP	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48997
DG(24:0/0:0/20:1n9)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(4Z,7Z,10Z,13Z,16Z)/18:3(9Z,12Z,15Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
purine ribonucleoside triphosphate binding	GO Molecular Function Annotations 2015	1.0	null
DG(20:3n6/0:0/18:3n3)	HMDB Metabolites of Enzymes	1.0	null
DG(20:5(5Z,8Z,11Z,14Z,17Z)/18:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
XPO4	Pathway Commons Protein-Protein Interactions	1.0	null
H3K27me3_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DG(16:0/0:0/20:3n9)	HMDB Metabolites of Enzymes	1.0	null
DG(18:3(9Z,12Z,15Z)/14:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:5(7Z,10Z,13Z,16Z,19Z)/14:1(9Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(20:4(5Z,8Z,11Z,14Z)/16:0/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(22:1(13Z)/20:3(8Z,11Z,14Z)/0:0)	HMDB Metabolites of Enzymes	1.0	null
DG(14:1n5/0:0/20:2n6)	HMDB Metabolites of Enzymes	1.0	null