association dataset threshold value standardized value NCIH1092 CCLE Cell Line Gene Expression Profiles 1.0 1.73863 DIMT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.88683 SRC_activemutant_51_GSE15815 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.35115 ZBTB5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.52782 placenta HPA Tissue Protein Expression Profiles 1.0 2.54103 carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.0586 R3HCC1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.5361 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A9FW-01A-11R-A37K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE249098_1_v_2_mthfd1l_human RummaGEO Gene Perturbation Signatures -1.0 null NONO CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87625 internal segment of globus pallidus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.96659 hsa-miR-197 TargetScan Predicted Conserved microRNA Targets 1.0 0.670641 Lip And Oral Cavity Carcinoma DisGeNET Gene-Disease Associations 1.0 null GSE88819_7_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null T3M10 CCLE Cell Line Gene CNV Profiles -1.0 -1.66681 nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.072 Cholangiocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.667 HT-55 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.14793 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A3KF-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Salivary_Gland-memory b cell Tabula Sapiens Gene-Cell Associations 1.0 2.41538 CAPAN-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.08007 Liver hepatocellular carcinoma_LIHC_TCGA-XR-A8TF-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null I-cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.664 GSE113267_3_v_2_rfx7_mouse RummaGEO Gene Perturbation Signatures -1.0 null Colon adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.311 Uterine Carcinosarcoma_UCS_TCGA-N5-A4RN-01A-12R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Hypopharyngeal squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.243 GSE119564_2_v_3_zfp217_mouse RummaGEO Gene Perturbation Signatures 1.0 null medial part of r8B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56081 H3K36me3_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RNF187 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.70543 RCC 786-O cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.574 MAP2K3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.18392 Cervical carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.574 MS751 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03859 MEF2A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 38.3871 Adenoid cystic carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.083 Papillary Carcinoma of the Thyroid_Thyroid Gland (MMHCC)_GSE3467 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.63258 SiHa cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.441 MT-CO3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.55461 hsa-miR-764 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 RAB6D CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.30175 Chitosome COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.637 mantle zone of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.1504 Myeloma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.479 High grade glioma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.668 amygdaloid complex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.980528 H3K36me3_cardiac mesoderm_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null Astrocytoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.485 3asube TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.102 Lewis lung carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.586 LRP6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.22642 hsa-miR-1283 TargetScan Predicted Conserved microRNA Targets 1.0 1.45615 Viral infectious disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.144 Perturb_7708_KD_Spt6_SRP132004 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -5.46291 H3K27ac_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null PNMA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.73198 POLR2A_HepG2_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-4301 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 layer 3 of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.434 BRD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.17936 H4K5ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ventrolateral prefrontal cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.914454 Gigantocellular reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03445 Pancreatic adenocarcinoma_PAAD_TCGA-HV-A5A3-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZSCAN23 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.26788 Lung squamous cell carcinoma_LUSC_TCGA-52-7809-01A-21R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.62419 SC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.62595 Cheek TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.387 mainolfactoryepithelium.MOE. BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.935166 PK59 CCLE Cell Line Gene CNV Profiles -1.0 -1.53307 testis_7d HPA Tissue Sample Gene Expression Profiles 1.0 2.37612 NCIH82 DepMap CRISPR Gene Dependency 1.0 3.19325 cerebellar cortex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.3127 primary visual cortex (striate cortex, area V1/17)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.850386 Brain Lower Grade Glioma_LGG_TCGA-TM-A7C4-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4892-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null primary motor cortex (area M1, area 4)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.16301 NCI-H1838 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.90392 DAUDI Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.42851 OELE CCLE Cell Line Gene Expression Profiles -1.0 -1.47279 LMAN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.84769 NAP1L3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.64736 GSE182680,GSE182683_10_v_3_dexamethasone_human RummaGEO Drug Perturbation Signatures -1.0 null H3K79me2_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HSF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.5083 PMC8020666-pnas.2015855118.sd09.xlsx-LPS_24_baboon_DRSG_higherRes-Ensemble_gene_id_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null HSC-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.059 Esophageal cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.172 ventral anterior nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.875782 PA-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.75534 posteroventral (inferior) parietal cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.43264 Glioblastoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.642 SK-MES-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.914 KG-1A cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.007 SARS-CoV MA15_Day1-PFU-10^4_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.79565 Medulloblastoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.992 NFIL3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.0967 eGFP-JUND_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null arcuate nucleus of the hypothalamus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.19571 Embryonic structure TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.091 LNCaP cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.584 r4 part of cochlear sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.22848 RERF-GC-1B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.39958 EB1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.08381 HS-SY-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.918 UCSD-242L Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.76106 TRPS1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.7922 pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.06541 CYTH3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.97257 SPIN2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.05362 FAM200A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.60822 H3K9me3_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ATG14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.75799 HCC1187 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -2.92818 primary auditory cortex (core)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.39698 928 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.47095 cerebellar cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.04314 Oral cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.073 HT-1080 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.205 ZFP42 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.5599 indusium griseum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.95518 hsa-miR-656 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 SLR24 CCLE Cell Line Gene CNV Profiles -1.0 -1.33021 ATOH7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.805 Perturb_39_KD_ATRX_SRP308220 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -3.61069 Lichen disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.335 GSE120595_0_v_4_arid2_mouse RummaGEO Gene Perturbation Signatures -1.0 null vestibular nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.949612 Acute lymphoblastic leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.116 CYB5D2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07569 Head and Neck squamous cell carcinoma_HNSC_TCGA-IQ-A61H-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27ac_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null T-cell acute lymphoblastic leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.895 Orbital area, lateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.26712 reticulotegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.75513 preoptic BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.84418 GATA1::TAL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.152 Mesothelioma_MESO_TCGA-SH-A7BH-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lymphocytic leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.753 Adenocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.207 LoVo cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.968 medial geniculate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32885 KPL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03859 inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.16695 Perturb_3594_KO_DELE1_SRP218218 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.60343 HSC-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.483 hut102 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.644 ZR7530 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.56688 Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A7IP-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K36me3_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-A7EF-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCE4 DepMap CRISPR Gene Dependency 1.0 2.85487 ZNF8 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.4182 retina BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.872179 Lung adenocarcinoma_LUAD_TCGA-MP-A4TK-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null VA-ES-BJ COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me2_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Medial geniculate complex, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21656 EZH2_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4989-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary auditory cortex (core)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.885596 Cochlear nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04255 r5 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.88294 primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.23459 Detroit-562 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.086 PITX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.3708 binding GO Molecular Function Annotations 2015 1.0 null Inferior colliculus, dorsal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1767 central part of CEl Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.32614 PRDX5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.36169 r9 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.53943 LAGE3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.66501 Edinger-Westphal nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.842448 Lymphoid leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.194 Disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.631 Large intestine cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.101 amygdalohippocampal transition zone, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.07881 layer V of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.28192 tonsil_8b1 HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 POLRMT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.94631 SP in caudal cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.39322 POLR2A_H1-hESC_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null appendices_4a HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 NHEK cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.001 DXO CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.60378 Osteoarthritis_Chondrocyte_GSE16464 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.36604 dorsolateral prefrontal cortex_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.849235 Oral squamous cell carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.784 Endoplasmic reticulum chaperone complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.059 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A556-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZMIZ1_02_181 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.63743 H3K4me1_G1E_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HW-A5KL-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HS-68 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.576 H3K36me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null increased fasting circulating glucose level IMPC Knockout Mouse Phenotypes 1.0 null GSE201239_0_v_7_fmr1_mouse RummaGEO Gene Perturbation Signatures 1.0 null HCC38 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.29934 POS cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.659 Acute Myeloid Leukemia_LAML_TCGA-AB-2955-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sleep disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.925 Nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 LRRC20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.01473 Ovary adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.563 SLITRK5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.63513 496100359_PCx_no dementia_no TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.00901 COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.983493 Tooth enamel TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.792 CEBPB_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null NDC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.44205 mantle zone of r6BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01745 HIPK1_knockout_170_GSE39253 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.65993 Esophageal cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.605 COLO 853 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.17786 SOX6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.08524 Nasopharyngeal carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.163 Schwann cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.993 frontal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.19033 p3u1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.107 Lung adenocarcinoma_LUAD_TCGA-55-7728-01A-11R-2187-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Autism spectrum disorder or schizophrenia GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.8 IRAK2_knockout_39_GSE10765 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 2.00145 GON4L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.76766 ASCL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.92759 Postsubiculum, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.01184 hsa-miR-4713-5p TargetScan Predicted Conserved microRNA Targets 1.0 1.11641 external part of AOV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00104 SNU-216 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.01079 COG4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76901 parabigeminal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.02545 Brain Lower Grade Glioma_LGG_TCGA-DU-7301-01A-11R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Tca-8113 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.908 ALG9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.09163 L-1210 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.29 FAM98C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.38712 posteroventral (inferior) parietal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.0979 Perturb_3637_KO_BLVRB_ERP115567 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 5.4056 Colon carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.727 RUNX1-30185409-HPC-MOUSE-BONEMARROW-LEUKEMIA ChEA Transcription Factor Targets 2022 1.0 null SP in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.33435 H3K79me2_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_7235_KD_CNOT1_SRP285534 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.57873 SW 1116 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.891634 RERF-LC-AI cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.931 GPATCH2L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.0481 GSE129287_0_v_1_cd200_mouse RummaGEO Gene Perturbation Signatures -1.0 null PRADC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.32698 superficial stratum of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03152 Buccal mucosa TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.173 hsa-miR-626 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 ZNF558 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 85.2519 Urinary system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.706 hsa-miR-4437 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 Salivary gland cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.629 PPID CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.26755 MCF-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.37269 dorsal subdivision of VLC Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.10225 NCIH292 CCLE Cell Line Gene CNV Profiles -1.0 -1.85933 hsa-miR-371-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 MRPL27 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78727 paraterminal gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.5305 Intermediate filament COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.997 U-87MG cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.33 icSARA deltaORF6_24Hour_23365422_GSE33267 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.61492 KYSE220 DepMap CRISPR Gene Dependency 1.0 6.41568 DnaJ domain InterPro Predicted Protein Domain Annotations 1.0 null hsa-miR-4421 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 Ehrlich ascites carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.675 TE1 CCLE Cell Line Gene Expression Profiles 1.0 1.80158 LHX8_Deficiency_GDS3254_600_mouse_Newborn ovaries GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null PDZD9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.58404 posteroventral (inferior) parietal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.02279 HCT-15 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.946 GATA-1_KD_GDS1245_81_mouse_megakaryocytes GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5SG-06A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary motor-sensory cortex (samples)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.904804 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29L-06A-12R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null STAT3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.8221 PITX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.70608 EZH2_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 17724462-TableS1 GeneSigDB Published Gene Signatures 1.0 null ATP2B1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22905 Lung squamous cell carcinoma_LUSC_TCGA-98-A539-01A-31R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.933 hsa-miR-4731-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 ventrolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.12498 superficial stratum of r9BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19132 inferolateral temporal cortex (area TEv, area 20)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.17477 k1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.961 ABITRAM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.36638 OVCAR-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.316 EZH2_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Integumentary system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.493 MAPK9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.63748 Agranular insular area, dorsal part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.61093 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7II-01A-11R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-85-A512-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GATA5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.1242 Outer dense fiber COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.575 AEN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.49807 facial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.995504 AKAP17A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.64976 HCC33 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.873601 Mucosa TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.158 A-431 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.394 CCRF-CEM cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.276 HO-1-N-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.543 Brain Lower Grade Glioma_LGG_TCGA-E1-A7YI-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-IE-A4EI-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE75976_3_v_4_abl1_mouse RummaGEO Gene Perturbation Signatures 1.0 null 496100307_FWM_possible Alzheimer's disease_no TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.18917 layer IIIu of area 35r Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.922083 PRC_Partial Depletion_GDS3531_563_human_U2OS cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null colonic adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.466111 posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.882224 r6 part of ventral parvicellular reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00498 hsa-miR-3119 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 PTPRCAP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4672 LLPH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.64776 nucleus of the inferior collicular brachium, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.46304 OV-90 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.4504 Pancreatic adenocarcinoma_PAAD_TCGA-IB-AAUT-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.993 ADRM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.8283 HOXB4-20404135-EML-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null dentate (lateral) nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.47959 SARAF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.72197 GSE236502_1_v_3_paclitaxel_human RummaGEO Drug Perturbation Signatures -1.0 null Atf1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 17.9242 Stat5a::Stat5b JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.1144 striatum_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.851807 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JC-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HOC-313 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.378 Brain cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.249 Bile duct carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.094 H3K36me3_G1E_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null MITF_02_85 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 2.41504 Periodontium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.564 H3K4me1_K562_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null TCP1_02_194 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.62803 HSF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 41.1757 U-937 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.18 Thoracic cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.167 primary auditory cortex (core)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.08409 Brain Lower Grade Glioma_LGG_TCGA-QH-A65Z-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ae3 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.824 Salivary gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.576 PYGM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.18423 hsa-miR-4713-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 hsa-miR-433 TargetScan Predicted Conserved microRNA Targets 1.0 0.131849 striatum_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.977388 Lung squamous cell carcinoma_LUSC_TCGA-J1-A4AH-01A-31R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Periodontitis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.081 HDQP1 CCLE Cell Line Gene Expression Profiles -1.0 -1.46907 Brain Lower Grade Glioma_LGG_TCGA-HT-8113-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5LJ-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SCC-15 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.775 ASXL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.13293 GP2D Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null GULP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.25546 periventricular stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13628 ZNF420 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.50876 glucose GAD Gene-Disease Associations 1.0 null H3K36me3_Colonic Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null superficial stratum of THyB-P Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11644 184B5 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.77989 BTG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.5327 Accessory facial motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05219 LCLC103H CCLE Cell Line Gene CNV Profiles -1.0 -2.73352 PC-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.356 hippocampus (hippocampal formation)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.941117 ATM_KD_GSE54268_661_human_MCF-10A GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null NR1H3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.65388 intermediate stratum of Ist Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35945 H3K27ac_skeletal muscle myoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Ray cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.835 r8 part of inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.53279 intercalated nucleus of medulla Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.865425 inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.06391 hsa-miR-29b TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 Kidney disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.373 KIAA1586 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.68564 inferior olive, medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.878582 IM-9 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.524 Perihypoglossal nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.47216 Skin epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.704 MELHO CCLE Cell Line Gene CNV Profiles 1.0 2.2352 roof plate of p2 (epithalamic roofplate) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13997 GATA1-22383799-G1ME-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Lef1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 23.2831 LRRC26 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.03151 hsa-miR-512-3p TargetScan Predicted Conserved microRNA Targets 1.0 1.45615 ALG12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32129 MKN-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.16443 LAD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.90139 NCIH2110 DepMap CRISPR Gene Dependency 1.0 4.4227 PPWD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29381 r7 part of nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77526 ATP13A3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.12512 hsa-miR-193a-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 ACSBG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.99536 Female reproductive organ cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.961 anterior nucleus of pulvinar Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.901036 A4/FUK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.47731 SPI1 ENCODE Transcription Factor Targets 1.0 null PNPT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.68953 superficial stratum of r8BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34971 primary motor cortex (area M1, area 4)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.90827 Esophageal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.156 hsa-miR-1224-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 Fibroid Tumor DisGeNET Gene-Disease Associations 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A71R-01A-12R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Nucleus of the lateral lemniscus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0016 TE10 CCLE Cell Line Gene CNV Profiles 1.0 2.05859 LXFL529 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.31737 Renal carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.461 anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.37963 CA3 field, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.842957 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6948-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MOLP-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.12307 hsa-miR-4326 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 FaDu cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.231 RNF227 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92939 HOXB4_induction_GDS3036_138_mouse_ES cell-derived embryoid bodies (EBs) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null intermediate part of r10B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77582 Obstructive sleep apnea_Hepatic Tissue_GSE1873 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.03727 NANOGNB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.31853 primary motor cortex (area M1, area 4)_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.971151 Kidney Chromophobe_KICH_TCGA-KL-8327-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-8259-01A-11R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TFPI2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.03573 Oropharynx cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.662 Uterine cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.757 HSC-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.442 624 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.65944 B95-8 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.675 JURKAT E-6.1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.504 r7 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05018 r8 part of linear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26256 T-47D cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.222 PRKAA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.51608 LIPA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.85294 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A8YR-01A-12R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pancreatic ductal adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.749 Hak TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.549 SK-MEL-28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.16125 ALKBH7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.42017 Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10R-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral hypothalamic area, anterior part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16111 C-33-A COSMIC Cell Line Gene Mutation Profiles 1.0 null Calu-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.134 TBXT JASPAR Predicted Human Transcription Factor Targets 2025 1.0 45.2909 pf382 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.63 ZNF207 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.25239 TTLL7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9329 CBFA2T3_KD_GDS4045_458_human_Non-Hodgkin's lymphoma Reh cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null APLP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.04737 lateral ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.34245 inferior olive, dorsal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.89362 B16-F10 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.574 RENBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.01437 gyrus rectus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.8653 KELLY CCLE Cell Line Gene Expression Profiles 1.0 2.70715 mediodorsal nucleus of thalamus_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.997351 Lung fibroblast cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.623 EFEMP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.17522 JEKO1 CCLE Cell Line Gene CNV Profiles 1.0 1.39386 PK-59 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03947 striatum_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.30191 MAX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74814 MPHOSPH10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.11138 bronchus HPA Tissue Protein Expression Profiles 1.0 0.957004 VPS52 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.36711 hsa-miR-3647-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 HGC-27 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.667 dorsal thalamus_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.62433 Perturb_15834_KO_Per1/Per2_SRP315583 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.69836 striatum_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.935202 Liver BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.16532 H3K9ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Upper respiratory tract disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.58 Bone marrow cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.32 NR1H4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44799 Disease of cellular proliferation DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.784 bone marrow HPA Tissue Protein Expression Profiles 1.0 0.957004 central nucleus of inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.69844 QGP-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.74871 NCI-H460 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.776 heart_5a HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 ventrolateral prefrontal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.03489 ANG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.04961 Anterior olfactory nucleus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25204 Hepatobiliary system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.95 LMX1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.51737 mediodorsal nucleus of thalamus_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.978294 H3K4me1_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SMAD5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.98675 Peripheral nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.385 ZR-75-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874436 MYBL1_KO_GDS4485_349_mouse_Testis from 14 day old GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null TEAD1 JASPAR Predicted Transcription Factor Targets 1.0 null hsa-miR-10a TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 superficial stratum of PO1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05974 Head and Neck squamous cell carcinoma_HNSC_TCGA-BA-4078-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.906 ERCC6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.08195 NCI-H2135 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.43308 SNU-423 COSMIC Cell Line Gene Mutation Profiles 1.0 null RRP9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32243 mediodorsal nucleus of thalamus_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.48337 Runx1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 18.126 IDI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46729 Mucoepidermoid carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.379 IGFBP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.38957 Mucositis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.412 HOXD11 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.1655 Tongue carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.612 ML-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.963 H2AC20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29913 Osteosarcoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.537 Fr TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.619 Lung squamous cell carcinoma_LUSC_TCGA-77-A5GA-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100539_HIP_probable Alzheimer's disease_TBI_78_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.61246 GSE200687,GSE200688_1_v_0_sox15_mouse RummaGEO Gene Perturbation Signatures 1.0 null Lung adenocarcinoma_LUAD_TCGA-62-A46O-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r4 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.55491 intestinal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.40366 GSE225141,GSE225143_0_v_1_mettl3_mouse RummaGEO Gene Perturbation Signatures 1.0 null amygdaloid complex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.97527 SCLC21H CCLE Cell Line Gene CNV Profiles -1.0 -1.36154 REC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.08832 Multiple myeloma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.995 fallopian tube HPA Tissue Protein Expression Profiles 1.0 0.957004 Prostate adenocarcinoma_PRAD_TCGA-FC-A8O0-01A-41R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE95077_1_v_4_amiloride_human RummaGEO Drug Perturbation Signatures 1.0 null PMC6361458__F5 PFOCR Pathway Figure Associations 2024 1.0 null PMC8020666-pnas.2015855118.sd11.xlsx-LPS_strongerResponse-Baboon_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null periventricular stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.85671 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A5-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Trigeminal nerve TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.071 Sarcoma_SARC_TCGA-Z4-A9VC-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Hyperplasia CTD Gene-Disease Associations 1.0 1.1437 r9 (gustatory) part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28002 UBB_KO_GDS3906_496_mouse_Testis - 28 Days GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null WDTC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.52389 Brain Lower Grade Glioma_LGG_TCGA-FG-5965-02B-11R-A29R-07,TCGA-FG-5965-02A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Gingiva TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.633 SW1990 CCLE Cell Line Gene Expression Profiles 1.0 1.58928 BOLA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.19253 HSFX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.47124 u87 HPA Cell Line Gene Expression Profiles -1.0 -1.42701 Lung adenocarcinoma_LUAD_TCGA-86-A456-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Uterine benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.489 C1orf74 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.1143 DDAH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.17365 IZ in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.2942 E2F1 JASPAR Predicted Transcription Factor Targets 1.0 null Organ system benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.374 parathyroid gland HPA Tissue Protein Expression Profiles 1.0 0.957004 MYC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76214 GSE234340_12_v_2_muc2_mouse RummaGEO Gene Perturbation Signatures 1.0 null YAP_OE_GDS3220_32_human_MCF10A GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null H3K36me3_CD4 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null NCIH2141 CCLE Cell Line Gene Expression Profiles -1.0 -1.51507 Intestinal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.053 SPI1-22096565-GC-B-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null preoptic region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.76658 Squamous cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 3.196 increased fasting circulating glucose level MGI Mouse Phenotype Associations 2023 1.0 null Bone marrow disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.314 Buccal epithelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.601 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4845-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Colonic cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.919 Epidermal cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.389 NCI-H1155 COSMIC Cell Line Gene Mutation Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LF-01A-21R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null T-98G cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.165 CENPE CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.1632 RNASET2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.35287 SNU-216 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.935791 Bile duct adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.084 primary auditory cortex (core)_25 pcw_F_12948 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.57671 UT-SCC-24A cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.571 Cell type benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.253 Medullary reticular nucleus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0539 Prostate adenocarcinoma_PRAD_TCGA-KK-A7AU-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Myeloid leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.52 C1orf43 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.69959 dorsolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.32623 primary auditory cortex (core)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.26482 SUMO2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43279 NCI-H1666 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.06376 PMC6361458__F5 PFOCR Pathway Figure Associations 2023 1.0 null periventricular stratum of r10Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.46668 CEBPB-24764292-MC3T3-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Lymphoblastoid cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.555 Peripheral nervous system neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.423 SNAPIN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.38096 Pellicle COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.057 PMC11385078-jciinsight-9-172336-s272.xlsx-1DEseq2_Report_AA_BL_vs_EA_BL-Unnamed_1_TEAD1 Rummagene Transcription Factor Associations 2026 1.0 null CCDC117 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.54546 MDA-MB-330 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.36496 PMC5452392-13058_2017_854_MOESM3_ESM.xlsx-Table_S7-Variants_within_GWAS_blocks_control_MAF_0_01_case_MAF_control_MAF_within_gwas_breast_cancer_regions_deleteious_score_0_5_MAF Rummagene Transcription Factor Associations 2026 1.0 null GFI1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29402 LITAF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.6168 r7 part of paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04585 posterior group of nuclei, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.12303 KYAE1 DepMap CRISPR Gene Dependency 1.0 3.08689 primary motor cortex (area M1, area 4)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.96497 A4/FUK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.862001 CAL-27 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.414 tcf12_20154672_cd4pos_cd8pos_thymocytes_thymus_lof_mouse_gpl6246_gse19923 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -1.09769 mantle zone of r10BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.77636 Rectal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.869 COQ10B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46854 ENTPD6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0583 H3K4me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Nr1h3::Rxra JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 55.4941 RBIS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.58344 MDA-MB-436 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.916051 Tumor Cell Invasion DisGeNET Gene-Phenotype Associations 1.0 null HEp-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.497 NCI-H2369 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.12711 primary motor cortex (area M1, area 4)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.4313 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4714-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-P4-A5ED-01A-11R-A28H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE226584,GSE226589_2_v_0_ezh2_human RummaGEO Gene Perturbation Signatures 1.0 null SARS-BatSRBD_Day2_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 2.3012 motor nucleus of trigeminal nerve Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.18236 Saliva TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.519 TBX5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.1418 UW228-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.573 Atoh1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 34.5718 dorsal part of m1A Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1907 HOXB9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.8242 Melanoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.588 Cervical Adenocarcinoma DisGeNET Gene-Disease Associations 1.0 null BARHL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.2675 H3K4me1_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Hypoglossal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.32686 Lung squamous cell carcinoma_LUSC_TCGA-43-6770-01A-11R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Hematopoietic cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.059 A-375 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.83 Respiratory system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.015 GSE183994_1_v_0_scml2_mouse RummaGEO Gene Perturbation Signatures 1.0 null BT20 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.00492 CIBAR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.32133 mantle zone of r9BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15886 ZNF214 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 45.9609 Prostate adenocarcinoma_PRAD_TCGA-V1-A8WS-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-105 TargetScan Predicted Conserved microRNA Targets 1.0 0.283838 Prostate adenocarcinoma_PRAD_TCGA-J4-A83K-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.096 STT3A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.85154 ESPL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49004 epithelial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.063035 PAX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.64186 r9 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.77796 SG in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.35777 Brain Lower Grade Glioma_LGG_TCGA-HT-7610-01A-21R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H2AFZ_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-552 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 Acute Myeloid Leukemia_LAML_TCGA-AB-2917-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r9 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.38669 OVKATE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.51056 Colonic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.933 UM-SCC-22A cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.507 colonic cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.138946 deep gray layer of SC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.20176 DMRTA2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.1511 ASIC3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.34204 PRDM13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.29979 CHD1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NOCT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07674 Uterine Carcinosarcoma_UCS_TCGA-N8-A56S-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE234340_4_v_2_muc2_mouse RummaGEO Gene Perturbation Signatures 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45W-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4697-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Hepatocellular carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.863 dentate gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.22881 SPI1 ChEA Transcription Factor Targets 1.0 null RHOXF2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.10149 JL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.68873 RAW-264.7 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.363 Rectum adenocarcinoma_READ_TCGA-AF-5654-11A-11R-1660-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.079297 KLF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.02344 OCI-LY-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.12307 SUM102PT Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.00701 spinal trigeminal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.879666 KMS-28PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25143 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A71A-01A-22R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Uterine Carcinosarcoma_UCS_TCGA-N8-A4PN-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Laryngeal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.536 PMC12670081-mct-24-0704_supplementary_table_s10_suppst10.xlsx-Supplementary_Table_S10-Supplementary_Table_S10_Differential_expression_of_TFCP2-rearranged_RMS_Vs_Other_RMS_FC_3_padj_0_01_TFCP2 Rummagene Transcription Factor Associations 2026 1.0 null YKG-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null small intestine HPA Tissue Protein Expression Profiles -1.0 -1.18028 parietal neocortex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.22866 Salivary gland cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.295 ventromedial hypothalamic nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.2375 anterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.04654 A-Netherlands-602-2009(H1N1)_0Hour_None_GSE40844 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.74782 PFDN5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -6.27682 REP15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.55643 DU-145 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.682 ZFHX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.89328 posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.838661 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5085-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OVCA-5 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.084 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A7-01A-11R-A22L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Immune system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.662 MCRS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.89926 SNU1033 CCLE Cell Line Gene Expression Profiles -1.0 -1.66425 Biliary tract disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.038 PSMA4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.73528 appendix HPA Tissue Protein Expression Profiles -1.0 -1.18028 GSE183994_3_v_0_scml2_mouse RummaGEO Gene Perturbation Signatures 1.0 null temporal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.16466 SCC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.41233 SK-N-SH Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.95712 Head and neck squamous cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.744 SRF JASPAR Predicted Transcription Factor Targets 1.0 null COLO 678 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.2587 H3K36me3_Rectal Smooth Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null parvocellular part of r8LRt Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.53907 fat_a.V1 HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 Prostate adenocarcinoma_PRAD_TCGA-EJ-8470-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cingulum bundle, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.901823 r7 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.17995 SNU478 DepMap CRISPR Gene Dependency 1.0 3.97 Myeloid neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.328 Uterine adenocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.607 hsa-miR-4691-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 short insular gyri, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.16786 orbital frontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.48454 CHO-K1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.283 Keratinocyte cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.114 hsa-miR-31 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 U-251MG cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.734 ZNF541 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.39605 Buccal mucosa cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.543 KEAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08859 Prostate adenocarcinoma_PRAD_TCGA-HI-7169-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null subbrachial nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.70389 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4992-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SK-MEL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.859658 P-388 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.819 LRRC75A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.02202 r9 part of nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.73962 viscus TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.065367 GCM1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.1023 intermediate stratum of m1Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45531 intracellular membrane-bounded organelle GO Cellular Component Annotations 2023 1.0 null hsa-miR-4744 TargetScan Predicted Conserved microRNA Targets 1.0 0.632343 SAOS-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.189 mantle zone of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.33104 H2AFZ ENCODE Transcription Factor Targets 1.0 null NCI-H2228 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25243 EPLC272H CCLE Cell Line Gene CNV Profiles 1.0 1.43285 SUM1315MO2 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.715167 Perturb_2096_KD_TENT4A_SRP237261 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.14779 TRIR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.33316 CA1 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.927026 r10 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09568 upper (rostral) rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.18562 Acute Myeloid Leukemia_LAML_TCGA-AB-2877-03A-01T-0735-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Larynx cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.53 DGCR8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.56365 Reproductive organ cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.098 superficial stratum of m1AD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26256 Multiple myeloma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.381 SG in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.937564 non-small cell lung cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.667 superficial stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.39979 ZFX_KD_GSE43021_130_human_NOMO1 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null efo21 HPA Cell Line Gene Expression Profiles -1.0 -0.895106 PDGFB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.88412 143B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.987808 hsa-miR-4460 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3QK-01B-11R-A23N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KDM1A_KD_GDS5055_457_mouse_adipose tissue GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Nasal squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.009 Breast disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.165 Breast cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.11 HUVEC cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.495 amygdaloid complex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.02404 NCIH1703 CCLE Cell Line Gene Expression Profiles 1.0 2.13282 KP-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.931701 DUSP22 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.63458 Prostate adenocarcinoma_PRAD_TCGA-YL-A8SJ-01B-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE68156_0_v_5_dextran_mouse RummaGEO Drug Perturbation Signatures 1.0 null EJM DepMap CRISPR Gene Dependency 1.0 2.09093 INTS14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.73296 Nucleus of the lateral lemniscus, horizontal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.70574 600MPE Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.11597 Head TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 Oral squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.647 G cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.825 Liver cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.937 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-JW-A69B-01A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5LC-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H2172 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.858139 Prostate adenocarcinoma_PRAD_TCGA-HC-A48F-01A-11R-A250-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cranial ganglion TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.821 GGT7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.20646 CCK81 DepMap CRISPR Gene Dependency 1.0 4.66588 Umbilical vein endothelial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.494 HCT-116 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.81 Edinger-Westphal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.90019 Male reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.92 HOXC11 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.4959 Bladder Urothelial Carcinoma_BLCA_TCGA-KQ-A41O-01A-12R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 7/8 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.967 r10 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44353 BT-483 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.37269 bonemarrow BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.00835 Lung adenocarcinoma_LUAD_TCGA-55-1595-01A-01R-0946-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NR1I3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.5701 PMC9306206-12915_2022_1367_MOESM8_ESM.xlsx-Table_S9_-_JIP-Gene_SMAD4 Rummagene Transcription Factor Associations 2026 1.0 null PBRM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.62681 CEBPB ENCODE Transcription Factor Targets 1.0 null ZUP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.56553 Arid3b JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 16.8229 COLO 679 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997986 GATA2-22383799-G1ME-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Muscular disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.166 Malignant Neoplasm DisGeNET Gene-Disease Associations 1.0 null Oral submucous fibrosis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.531 Colorectal cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.1 HCC2279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.03428 carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.065944 hsa-miR-193b TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 Colonic cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.919 FOS_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cerebellum_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.848024 H3K4me2_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null posteroventral (inferior) parietal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.32453 vagina HPA Tissue Protein Expression Profiles -1.0 -1.18028 lateral parabrachial nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.07886 hippocampus (hippocampal formation)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.3782 SP9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.1642 hsa-miR-29c TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 dorsolateral prefrontal cortex_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.922903 MOLT-4 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.629 hsa-miR-4742-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 PMC8020666-pnas.2015855118.sd09.xlsx-LPS_24_baboon_DRSG_higherRes-Hg_gene_id_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null Acute erythroid leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.228 HOXB4 ChEA Transcription Factor Targets 1.0 null MYCN-27167114-CHIP-SEQ-NEUROBLASTOMA-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Pancreatic cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.579 OE-21 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.518 animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Chorioallantois TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.949 SCH DepMap CRISPR Gene Dependency 1.0 2.31922 dorsal subnucleus of MG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.55391 Tongue disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.941 Lung adenocarcinoma_LUAD_TCGA-50-5931-01A-11R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HOS cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.819 Adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.156 colon TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.268482 UBR4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.09696 IGF1R_druginhibition_47_GSE14024 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.43898 HBL-100 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.12206 Lung squamous cell carcinoma_LUSC_TCGA-56-8083-01A-11R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAPZB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.50344 COMMD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.03588 B-lymphoblastoid cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.754 SENP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0266 intermediate stratum of RMa Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38435 rhombomere 10 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.36654 ventrolateral prefrontal cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.11169 NCIH2171 CCLE Cell Line Gene Expression Profiles 1.0 2.27446 SF126 DepMap CRISPR Gene Dependency 1.0 3.22203 Perturb_3612_KO_BRD9_SRP127343 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.34707 Lung squamous cell carcinoma_LUSC_TCGA-NC-A5HI-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null APH1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79192 Cervix carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.17 ZNF736 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66097 ZNF366 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.58351 SLC48A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.22594 Colorectal carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.455 Lung carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.897 Rectum adenocarcinoma_READ_TCGA-DY-A1DD-01A-21R-A155-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SP in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.2613 Rhizome TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.093 epithelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.058023 COLO 853 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.51237 Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A2LA-01A-11R-A18C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pleural mesothelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.599 Macrophage cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.331 AMER1_OE_GDS4802_549_human_HEK293 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null testis_7a HPA Tissue Sample Gene Expression Profiles 1.0 1.42316 Lymphatic system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.662 H3K4me1_G1E_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lymphoma_burkitts(Raji) BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.97497 SALL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82052 Laryngeal squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.686 Dental plaque TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.524 HCC-15 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.932 superficial stratum of r1BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32369 r7 part of the posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.45568 Thymus-naive b cell Tabula Sapiens Gene-Cell Associations 1.0 1.31012 Maxillary cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.078 pineal_day BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.861222 Retinal cell cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.016 ETF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68219 Lingula (I), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34971 Gastric cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.454 Nuclear envelope adjacent to nuclear pore complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.789 Prostate gland cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.706 NEUROG1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.4498 HEC59 CCLE Cell Line Gene Expression Profiles 1.0 1.6183 Tongue cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.946 Colorectal adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.224 PE01 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.851862 Genetic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.279 Tongue cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.404 BRWD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26258 CTCF ENCODE Transcription Factor Targets 1.0 null layer II of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.01713 Kidney renal papillary cell carcinoma_KIRP_TCGA-G7-A8LB-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary visual cortex (striate cortex, area V1/17)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.892291 Oral cavity cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 3.411 H2AFZ_osteoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MFM-223 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.916051 SPI1-20176806-THIOMACROPHAGE-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Lung cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.076 posterior (caudal) superior temporal cortex (area 22c)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.02042 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A2LS-01A-22R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MYL6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.4111 Central nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.613 Hematopoietic system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.664 RAB5IF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12162 SNU216 DepMap CRISPR Gene Dependency 1.0 2.33231 Breast adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.098 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NH-01A-11R-A27V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Squamous Cell Carcinoma Of Tongue DisGeNET Gene-Disease Associations 1.0 null hsa-miR-150 TargetScan Predicted Conserved microRNA Targets 1.0 1.26663 NCI-H1869 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.22778 Supportive connective tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.251 ZKSCAN5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 38.1945 BT-549 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.992 Ovarian embryonal carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.045 PANC-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.565 r6 part of ventral gigangocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13736 MDST8 CCLE Cell Line Gene Expression Profiles -1.0 -2.05944 COV504 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.1922 ZNF852 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.08615 BICDL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.40513 CEP192 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.13306 Skin Cutaneous Melanoma_SKCM_TCGA-FW-A3I3-06A-11R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PPARA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.39056 MDAMB157 CCLE Cell Line Gene Expression Profiles -1.0 -1.94448 HOXB7-26014856-BT474-HUMAN ChEA Transcription Factor Targets 2022 1.0 null 496100412_FWM_possible Alzheimer's disease_TBI_87_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.73319 superficial layers of caudal presubiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.61118 Disease of metabolism DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.231 SUDHL1 CCLE Cell Line Gene Expression Profiles 1.0 1.81295 Lung adenocarcinoma_LUAD_TCGA-55-8097-01A-11R-2241-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null outer CP in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.23964 B-cell lymphoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.37 Breast cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.108 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5084-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RALGPS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.61236 ventral subnucleus of MG Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16556 Perturb_11528_KD_ATAC1_SRP109127 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 16.7657 mantle zone of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.93612 Lung adenocarcinoma_LUAD_TCGA-62-A471-01A-12R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null WDR12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.18842 occipital pole, left, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.33584 Thoracic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.164 Bladder Urothelial Carcinoma_BLCA_TCGA-S5-AA26-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.867 hsa-miR-155 TargetScan Predicted Conserved microRNA Targets 1.0 0.248923 ventrolateral prefrontal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.943654 Brain TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 MACROH2A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.45983 UROS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.81978 TRAPPC10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.04592 Bladder Urothelial Carcinoma_BLCA_TCGA-SY-A9G0-01A-12R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleus GO Cellular Component Annotations 2025 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZR-75-30 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.642 primary motor cortex (area M1, area 4)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.29184 RARRES1_KD_GDS4818_314_human_SUM149 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null STX16 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9571 ABAT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96371 subgranular zone of rostral dentate gyrus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.74627 H2AFZ_fibroblast of lung_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.761 primary motor cortex (area M1, area 4)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.25558 BT-483 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.562 mediodorsal nucleus of thalamus_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.880807 Breast TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.117 adrenal gland HPA Tissue Protein Expression Profiles 1.0 0.957004 Bone cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.626 isthmic part of the intermediate lateral lemniscal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.11482 GSE88819_1_v_8_tug1_mouse RummaGEO Gene Perturbation Signatures -1.0 null Tongue TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.837 SKLU-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.719 GP5D COSMIC Cell Line Gene Mutation Profiles 1.0 null FUNDC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.05659 EZH2_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null U-2 OS Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.26659 CADOES1 CCLE Cell Line Gene Expression Profiles 1.0 1.45658 Immune system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.624 PMC4521181-oncsis201520x8.pdf-72-MYT1L_MYT1L Rummagene Transcription Factor Associations 2026 1.0 null medial subdivision of central nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -3.11542 SNU349 DepMap CRISPR Gene Dependency 1.0 2.36822 Lung adenocarcinoma_LUAD_TCGA-91-7771-01A-11R-2170-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsolateral prefrontal cortex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.940183 Laryngeal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.547 GSE119978,GSE180930_0_v_4_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null Skeletal muscle cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.584 PANC 02.03 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.873601 Fibroblast cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.803 cerebellar cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.67366 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FF-8046-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior olfactory area, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1035 primary motor cortex (area M1, area 4)_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.18431 duodenum HPA Tissue Gene Expression Profiles 1.0 1.2117 A172 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.08926 Rectum adenocarcinoma_READ_TCGA-F5-6465-01A-11R-1736-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hapt1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.806 Lung adenocarcinoma_LUAD_TCGA-38-4630-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-3926 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 GSE147056_0_v_1_actl6b_mouse RummaGEO Gene Perturbation Signatures 1.0 null JHU011 DepMap CRISPR Gene Dependency 1.0 3.18033 MKX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.1719 NRBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.34421 WFS1_KO_GSE33372_395_mouse_hypothalamus GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Pharynx cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.858 MITF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.2661 dorsal thalamus_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.953548 496100395_TCx_no dementia_no TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.64417 Autonomic nervous system neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.439 superior frontal gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.70307 GSE88819_1_v_2_tug1_mouse RummaGEO Gene Perturbation Signatures -1.0 null Retinal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.058 GSE88819_3_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null MOB1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.79801 CTCF_fibroblast of dermis_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SW-1116 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.561 H3K36me3_erythroblast_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null non-small cell lung adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.584 LRRC75B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.43892 ZCCHC14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.50816 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null WTX_OE_GDS4802_34_human_HEK293 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Tonsil cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.071 H1-7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.99308 posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.19694 HN-30 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.363 GSE224969,GSE224971_3_v_1_chtop_mouse RummaGEO Gene Perturbation Signatures 1.0 null M1 melanoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.254 NFU1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.46451 hippocampus (hippocampal formation)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.835407 Nucleus of the lateral lemniscus, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30698 NR3C1 JASPAR Predicted Transcription Factor Targets 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-G3-A5SJ-01A-11R-A27V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.37672 UBR3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.20115 skeletalmuscle_b HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 superficial stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.21988 r9 portion of vagal motor nucleus (postmigratory) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.0525 Gastric adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.151 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45Y-01A-11R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null terete nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11579 Prostate adenocarcinoma_PRAD_TCGA-CH-5765-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Nasopharyngeal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.401 Mouth TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.782 NR4A2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.3523 ventrolateral prefrontal cortex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.47305 PMC4591983__F5 PFOCR Pathway Figure Associations 2023 1.0 null Buccal epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.048 Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3466-01A-02R-1351-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SAP130 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.74503 r6 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32957 H3K27ac_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Parasubiculum, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01551 hsa-miR-548am TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 ADAD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.95907 Melanoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.883 H3K36me3_NT2-D1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ASH1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.98871 Kdm1a_KD_GDS5055_275_mouse_3T3-L1 preadipocytes - 48h GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Rhabdomere COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.597 mantle zone of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.22848 Perivitelline space COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.129 r8 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.50117 HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.983493 Kidney renal papillary cell carcinoma_KIRP_TCGA-J7-A8I2-01A-12R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null WI-38 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.985 NCI-H1792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.858916 PCDH12_Deficiency_GDS3415_577_mouse_Embryonic placentas (12.5 day) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FW-A5DX-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsal thalamus_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.981931 Intermediate filament cytoskeleton COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.996 ventrolateral prefrontal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.40253 Intestinal cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.101 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5092-01A-01R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-WY-A85E-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K36me3_Brain Anterior Caudate Roadmap Epigenomics Histone Modification Site Profiles 1.0 null ARH77 DepMap CRISPR Gene Dependency 1.0 4.66311 NTS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.79227 SK-MEL-30 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.08221 GATA4-25053715-YYC3-HUMAN ChEA Transcription Factor Targets 2022 1.0 null hsa-miR-3124-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 T-24 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.893 LCLC-103H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.36361 Breast cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.865 Perturb_537_KD_MYBL2_SRP161768 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 14.3109 B4GALT7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.61466 SAMHD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.56501 lateral habenular nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.33883 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4NQ-01A-21R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ethinyl estradiol_oryzias latipes_gpl16266_gse44859 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Ocular cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.093 BHLHE22 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.617 NTAQ1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.54537 OC-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.312 VZ in septal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.84475 Agranular insular area, dorsal part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06769 Hematologic cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.986 Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A4XJ-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Gastric adenosquamous carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.179 rhombomere 11 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.20385 VAMP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.57708 colonic cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.413912 KLF4-19829295-ESCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null HBL-100 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.59078 GA10 CCLE Cell Line Gene Expression Profiles 1.0 1.64483 superficial stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.74878 MDA-MB-361 COSMIC Cell Line Gene Mutation Profiles 1.0 null TSCCA cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.985 PANC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.561 SK-N-AS cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.557 Monocytic leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.482 H3K36me3_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Esophageal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.563 SCAF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.0764 8305C CCLE Cell Line Gene Expression Profiles -1.0 -1.57639 WM-115 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.523 Perturb_8257_KD_RBM27_SRP013565 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 3.0643 NME6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.5012 hsa-miR-29a TargetScan Predicted Nonconserved microRNA Targets 1.0 1.40969 r7 part of cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.93926 POLR2A ENCODE Transcription Factor Targets 1.0 null KP4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.68496 Pericarp TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.813 layer 1 of PaS Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16622 PMF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02647 primary auditory cortex (core)_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.861578 HCC2218 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.941634 Perturb_7770_KO_SatIII_DRP005513 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 3.65656 posterior (caudal) superior temporal cortex (area 22c)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.17059 TRIM28 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.38454 r6 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1829 Glioblastoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.536 large intestine TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.221755 Submandibular gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.461 OVCAR-5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.40382 LMO2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.50795 PFDN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.91072 r10 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1527 ELF5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.85758 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4696-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IRF8-27001747-CHIP-SEQ-BMDM-MOUSE ChEA Transcription Factor Targets 2022 1.0 null HTOXAR-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.752 inferior occipital gyrus, right, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.67419 Inferior olivary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.66626 orbital frontal cortex_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.0663 F5 DepMap CRISPR Gene Dependency 1.0 3.58663 Pancreatic adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.164 Lung squamous cell carcinoma_LUSC_TCGA-56-7221-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-8105-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POU3F4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.6149 NCI-H292 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.82326 SW 1573 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.983493 Head and Neck squamous cell carcinoma_HNSC_TCGA-DQ-7589-01A-11R-2232-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.76 Lung adenocarcinoma_LUAD_TCGA-55-7910-01A-11R-2170-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intermediate stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.54569 inferior frontal gyrus, orbital part, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.2466 HMGB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.21959 CAOV-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.867235 TAF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84805 DHX37 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56519 Lung cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.887 Gum cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.294 DMS 53 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.70909 H3K36me3_CD8 Naive Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Skin TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.354 DEGS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.2608 Gastric cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.511 intermediate stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.43626 periventricular stratum of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.55592 496100346_FWM_no dementia_TBI_81_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.0065 SG in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00652 Renal cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.222 CHRD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.31194 DOC2A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.20469 hsa-miR-4762-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 PANK4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.99661 VASP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.92707 rectal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.445653 Primary somatosensory area, lower limb, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04315 periventricular stratum of r9Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.04937 Verrucous carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.119 Periodontal ligament TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.15 striatum_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.850524 KCNK15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.97217 3t6 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.99 Lung adenocarcinoma_LUAD_TCGA-44-7660-01A-11R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null m07e TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.505 EPLC-272H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.07917 HMGA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.00591 SNU216 CCLE Cell Line Gene Expression Profiles -1.0 -1.48685 MiaPaCa-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.185 TP63 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.6904 Perturb_7182_KD_MED26_SRP164752 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.01387 r1 part of intermediate nucleus of the lateral lemniscus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32445 CASKIN2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.31463 cerebellum_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.39459 superficial stratum of r9BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.11485 TAL1::TCF3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.5455 RARA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 51.4212 Head and neck squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.446 skeletalmuscle_e HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 Laryngeal carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.436 ARID5B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.17564 outer CP in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.05642 CA4 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.21003 HCC12 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.68674 Lung squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.176 EIF6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.19318 SK-MEL-2 COSMIC Cell Line Gene CNV Profiles 1.0 4.51153 IZ in primary auditory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.15017 central nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null ZNF189 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.9384 3Y1-B clone 1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.156 C1orf159 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60688 testis HPA Tissue Protein Expression Profiles 1.0 0.957004 EXOSC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.81988 superficial stratum of PcPV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.70212 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4971-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAKI1 CCLE Cell Line Gene Expression Profiles -1.0 -2.26859 H2AFZ_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-6225-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LRP12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.55914 SARM_KO_GDS4842_411_mouse_brain GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Epithelioma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.396 hsa-miR-653 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 Brain Lower Grade Glioma_LGG_TCGA-HW-7487-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS5_H1-hESC_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GP5D Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null Chronic myeloid leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.278 r9 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.40674 subthalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.852984 Muscle benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.753 HGF cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.001 SG in ventrolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.52304 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GN-06A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r9 part of trigeminal transition zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15916 IMR-32 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.072 Anterior olfactory nucleus, external part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25705 H3K27ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Trigeminal ganglion TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.828 BJ cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.926 HCC2935 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.93 colorectal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.446422 ZNF267 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47511 ENSG00000284691 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.30719 Inherited metabolic disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.123 posteroventral (inferior) parietal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.86814 IZ in posteroinferior (ventral) parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.05222 ELK1::HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.0433 PF-382 COSMIC Cell Line Gene Mutation Profiles 1.0 null Retinal cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.026 TNPO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.59457 colo680n TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.91 PPARG-20887899-3T3-L1-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Pancreatic adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.422 NCI-H2030 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.03167 YY2_01_19 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.62138 TP63 ChEA Transcription Factor Targets 1.0 null corpus callosum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.75941 Integrin alpha3-beta1 complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.621 Mesothelioma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.558 DU 145 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.88113 KG-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.961 Nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4228 anterior orbital gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.02372 MFE296 DepMap CRISPR Gene Dependency 1.0 7.05712 head TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Larynx TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.927 Mat-Ly-Lu cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.117 HNRNPU CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.07198 COLO 857 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 2.17533 HOXC10 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.7119 MOLT13 CCLE Cell Line Gene Expression Profiles 1.0 3.01446 Prostate gland cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.816 Head And Neck Carcinoma DisGeNET Gene-Disease Associations 1.0 null KMS28BM CCLE Cell Line Gene CNV Profiles -1.0 -1.89037 COR-L88 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.874436 NDUFA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.66123 primary motor cortex (area M1, area 4)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.39943 HOXB4-20404135-EML-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Connective tissue cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.43 superficial stratum of m1AL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.69871 hsa-miR-4673 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 SOCS5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.8597 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2R9-01A-11R-A18M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PLIN3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.57754 m1Lim part of the midbrain reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45531 496100440_FWM_possible Alzheimer's disease_no TBI_95-99_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.24846 PABPN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.72263 GSE179138_4_v_1_lama4_mouse RummaGEO Gene Perturbation Signatures -1.0 null ELL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15238 PMC8020666-pnas.2015855118.sd11.xlsx-LPS_attenuatedResponse-Unnamed_13_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null Retinoblastoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.016 SET2 DepMap CRISPR Gene Dependency 1.0 3.54834 COLO 794 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.63523 Bile duct disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.041 Cpae TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.657 Head and neck carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.745 LEAP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.50981 lateral mammillary nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03379 HEY1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.71858 IP6K2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76955 HCT-116 COSMIC Cell Line Gene Mutation Profiles 1.0 null hippocampus (hippocampal formation)_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.27941 DLX5_Deficiency_GDS4443_355_mouse_E10 embryos GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null A172 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.874893 Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3467-01A-02R-1351-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-46-6026-01A-11R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Glioblastoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.49 CALML6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.33064 Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A705-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Male reproductive organ cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.937 AZI2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.39416 BCLAF1_01_214 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 0.7885 abnormal skin morphology MGI Mouse Phenotype Associations 2023 1.0 null T-lymphoblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.606 Macropinosome COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.574 subbrachial nucleus, rostral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.65972 KMS-28BM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20696 Postsubiculum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15943 r10 part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72013 hsa-miR-548t TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 143B cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.518 SQLE CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.02354 EZH2 ENCODE Transcription Factor Targets 1.0 null TXN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.79591 Gingival fibroblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.531 ABCB6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60441 Leukocyte disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.296 PMC5047620__F6 PFOCR Pathway Figure Associations 2023 1.0 null Perturb_15452_KD_circCSNK1G3_SRP139940 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.73555 SORD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54967 Lung squamous cell carcinoma_LUSC_TCGA-L3-A524-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ENKD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.03977 OE-33 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.66 CA2 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.941107 orbital frontal cortex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.73054 P2RY11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07334 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 USF2 JASPAR Predicted Transcription Factor Targets 1.0 null COLO 857 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.25096 FOXC1 JASPAR Predicted Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-EJ-A46E-01A-31R-A250-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NHOK cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.83 NEMP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.53826 496100357_TCx_no dementia_no TBI_95-99_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.29776 CAL-148 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.75534 Placenta TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.091 TBX19 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 53.7033 HNRNPA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.78692 Juice TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.107 testis BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 2.09859 r6 part of nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30262 ODR4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.77563 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-LP-A4AU-01A-32R-A32Y-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NIH:OVCAR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.928705 medial portion of STH Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.42138 Acute Myeloid Leukemia_LAML_TCGA-AB-2840-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NR1I2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.066 inferolateral temporal cortex (area TEv, area 20)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.8151 NCI-H1915 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05999 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A5UC-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Eye disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.124 Pancreatic adenocarcinoma_PAAD_TCGA-HZ-A49G-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-CH-5743-01A-21R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior (caudal) superior temporal cortex (area 22c)_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.931049 POLR2A_HGPS cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FGF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.45021 EPS15L1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.85218 Disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.925 FADU CCLE Cell Line Gene CNV Profiles 1.0 1.71077 COLO 699 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.18972 hippocampus (hippocampal formation)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.864135 KYSE-270 COSMIC Cell Line Gene Mutation Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-97-8552-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE201239_6_v_7_fmr1_mouse RummaGEO Gene Perturbation Signatures 1.0 null Plant parenchyma TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.684 COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.75803 Organism form TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.091 Brain cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.553 H3K36me3_Adipose Nuclei Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.44 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51R-06A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TAF6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.11394 Mouth disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 3.183 death-inducing signaling complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.794 496100418_TCx_no dementia_TBI_85_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.26646 IFT57 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.11949 r8 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19404 TMEM209 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.13366 suz12_17339329_mouse_embryonic_stem_cell_es_cell_lof_mouse_gpl1261_gse31354 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.161983 HT1376 CCLE Cell Line Gene Expression Profiles 1.0 1.69579 Micropyle COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.572 subgenual (subcallosal) division of MFC (area 25) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.842314 hsa-miR-511 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 Skin carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.129 precommissural nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.08629 SK-MEL-28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.934785 TP73 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.976 GSE178714_6_v_4_smad2_human RummaGEO Gene Perturbation Signatures 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-58-A46L-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null C3orf14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34945 Lung adenocarcinoma_LUAD_TCGA-93-A4JO-01A-21R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PTPN12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.16552 NCI-H1734 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.36662 r9 part of the inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.04073 Brain Lower Grade Glioma_LGG_TCGA-FG-A60J-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE145249_1_v_2_ppm1g_human RummaGEO Gene Perturbation Signatures -1.0 null Leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.891 MRPL20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8438 Brain Lower Grade Glioma_LGG_TCGA-HT-8558-01A-21R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-3187-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 SK-HEP-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.726 HSCC cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.789 paracentral lobule, posterior part, right, bank of cingulate sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.34555 WiDr cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.138 ACHN CCLE Cell Line Gene Expression Profiles -1.0 -1.71596 Ventricular hypertrophy_Myocardial tissue_GSE4678 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.07687 KYSE-140 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.46975 Bone cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.565 HCC2688 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.13671 451LU COSMIC Cell Line Gene Mutation Profiles 1.0 null A-2780 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.041 hf1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.876 PMC11696420-41467_2024_55617_MOESM3_ESM.xlsx-Sheet1-Supplementary_Data_1_The_2495_differentially_expressed_genes_between_the_L3MBTL3_knockout_L3-KO4_or_L3-KO5_and_control_C_groups_of_SUM159PT_cells_L3MBTL3 Rummagene Transcription Factor Associations 2026 1.0 null RWDD2A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.45785 H3K4me1_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null Hypopharyngeal carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.239 Prostate cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.816 Head and neck cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.812 ZNF317 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.45814 SK-MEL-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 3.24385 AsPC-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.933 testis_4a HPA Tissue Sample Gene Expression Profiles 1.0 1.28365 Nucleus of the brachium of the inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.92393 GSE224969,GSE224971_3_v_7_chtop_mouse RummaGEO Gene Perturbation Signatures 1.0 null KLHL21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.68655 superficial stratum of isLim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.74092 ventrolateral prefrontal cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.61051 CAKI-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.874014 TRUB2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.03683 DBX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.99375 anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.88867 Acute Myeloid Leukemia_LAML_TCGA-AB-2943-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4735-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 Lymphoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.629 PRRG3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.73578 Oral squamous cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 3.356 u266b1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.719 cerebellar cortex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.05126 CEBPB_A549_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.70588 JHOS-2 COSMIC Cell Line Gene Mutation Profiles 1.0 null DnaJ domain, conserved site InterPro Predicted Protein Domain Annotations 1.0 null Promyelocytic leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.2 FHL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.18539 MAK16 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.52089 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4813-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Esophageal squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.311 Ebolavirus(ZEBOV)_1day_Liver_None_GSE57214 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.68108 MRPL34 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.21206 SK-MEL-31 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.858587 RT-4 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.737 primary auditory cortex (core)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.838661 dorsal lateral geniculate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.11613 SW837 CCLE Cell Line Gene CNV Profiles -1.0 -1.44918 posteromedial visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03208 Endometriosis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.034 amygdaloid complex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.00275 CAL148 CCLE Cell Line Gene CNV Profiles -1.0 -1.9827 Periodontal ligament cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.283 Brain Lower Grade Glioma_LGG_TCGA-DU-A7TG-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K36me3_erythroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2MC-06A-12R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null testis_7b HPA Tissue Sample Gene Expression Profiles 1.0 1.23688 Perturb_7343_KD_SFPQ_SRP281189 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.36695 Stomach carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.355 Perturb_7527_KO_EED_SRP239128 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Pancreatic cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.774 CTCF-20526341-ESCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null ZNF559 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48859 ILK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.7787 Twig TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.562 SK-MEL cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.057 H3K9ac_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null GSE210662_2_v_0_znf165_human RummaGEO Gene Perturbation Signatures 1.0 null Thyroid cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.105 mantle zone of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.78192 H3K36me3_Breast Myoepithelial Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null MEL-HO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.4289 Dorsal motor nucleus of the vagus nerve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.92614 H3K9me3_osteoblast_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null ctnnb1_21565795_adrenocortical_adenomas_lof_mouse_gpl570_gds3912 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.023055 Nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.98476 primary visual cortex (striate cortex, area V1/17)_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.15521 Vas efferens TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.539 primary motor cortex (area M1, area 4)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.65949 H3K4me3_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TPR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.26852 EIF1AY CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.31995 Hedgehog signaling complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.272 HS940T CCLE Cell Line Gene Expression Profiles -1.0 -2.05499 Gingival fluid TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.735 subcuneiform nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.09134 medial part of r10B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.80224 liver HPA Tissue Protein Expression Profiles -1.0 -1.18028 KOSC-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.893 H3K36me3_erythroblast_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Gonadal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.751 Pancreatic carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.505 CH-27 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.941 TCF21 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.8506 H3K4me1_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NUB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.05441 oculomotor nuclear complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.39197 urinary bladder HPA Tissue Gene Expression Profiles -1.0 -0.903002 ATP2B4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.55269 cortico-medial group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.51833 Prostate adenocarcinoma_PRAD_TCGA-KK-A6DY-01A-12R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of Mam Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03265 COLO849 CCLE Cell Line Gene CNV Profiles 1.0 1.57207 Blood cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.164 TMK1 DepMap CRISPR Gene Dependency 1.0 2.57173 KELLY CCLE Cell Line Gene CNV Profiles 1.0 1.3321 Neurodegenerative disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.123 FADU Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.37812 Skin disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.497 HL-60 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.226 Glioma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.191 RBM41 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.49718 Ovarian cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.793 SK-BR-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.415 amygdaloid complex_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.33288 anterior (rostral) cingulate (medial prefrontal) cortex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.15505 non-Hodgkin lymphoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.464 BRD4-25478319-HGPS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Brain Lower Grade Glioma_LGG_TCGA-VM-A8CB-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null smallintestine_4b HPA Tissue Sample Gene Expression Profiles 1.0 0.933863 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4325-01A-02R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.117 r8 part of nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.53255 Neurofibromatosis DisGeNET Gene-Disease Associations 1.0 null A-9 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.607 UM-UC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.74571 Integrin alpha6-beta4 complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.64 HSF1-23293686-STHDH-STRIATAL-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Chondrosarcoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.768 SPI1-22096565-GC-B-MOUSE ChEA Transcription Factor Targets 2022 1.0 null MLLT3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68751 NFYB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.2277 H3K36me3_Duodenum Mucosa Roadmap Epigenomics Histone Modification Site Profiles 1.0 null GSE88819_1_v_9_tug1_mouse RummaGEO Gene Perturbation Signatures -1.0 null dentate gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.05441 Myoma DisGeNET Gene-Disease Associations 1.0 null ZNF382 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.15413 Postsubiculum, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.34713 primary auditory cortex (core)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.2405 Head and Neck squamous cell carcinoma_HNSC_TCGA-RS-A6TO-01A-32R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.939 SK-BR-3 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.459 KATO-III cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.035 GSE244233_1_v_0_quercetin_human RummaGEO Drug Perturbation Signatures -1.0 null TARDBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.60271 Perturb_2076_OE_PUM1_SRP072710 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.53686 Hepatobiliary disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.874 8305C CCLE Cell Line Gene CNV Profiles 1.0 1.38863 Bone marrow cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.512 chaperone binding GO Molecular Function Annotations 2015 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DR-A0ZM-01A-12R-A10U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pancreas disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.738 1br3 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.76 JMJD6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.19886 oral mucosa HPA Tissue Protein Expression Profiles -1.0 -1.18028 primary auditory cortex (core)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.32825 Pancreatic ductal carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.885 Pheochromocytoma and Paraganglioma_PCPG_TCGA-RT-A6YC-01A-12R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MU-A51Y-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CELF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46145 CD34+ BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.968688 mantle zone of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56081 Declive (VI), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09365 Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7HH-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.786 CADM3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79059 messa/dx5 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.72 USP7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.86281 GSE202359_1_v_0_rbpms_mouse RummaGEO Gene Perturbation Signatures 1.0 null HEC6 CCLE Cell Line Gene CNV Profiles 1.0 1.84055 Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-7072-01A-21R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A45U-01A-12R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Spev TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.886 CEBPB_IMR-90_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dorsolateral prefrontal cortex_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.741 soft tissue HPA Tissue Protein Expression Profiles -1.0 -0.83876 TCF7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.4098 ELP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96832 dorsolateral prefrontal cortex_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.10553 MTREX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.1884 LB771HNC DepMap CRISPR Gene Dependency 1.0 3.70615 RAD51AP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.74755 GRK3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.24073 Colorectal adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.865 dorsomedial hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.918947 L33 DepMap CRISPR Gene Dependency 1.0 3.17234 MDA-MB-231 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.795 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4337-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PMC4815041-NIHMS715090-supplement-Supplementary_Table_10.xlsx-CCF_DP_clustering-Hugo_Symbol_PITX1 Rummagene Transcription Factor Associations 2026 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LA-01A-11R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null REC1 CCLE Cell Line Gene CNV Profiles -1.0 -1.71726 Renal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.27 H3K36me3_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Squamous cell carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.732 Endocrine system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.89 GPR150 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.60993 KASUMI1 CCLE Cell Line Gene Expression Profiles 1.0 1.54905 superficial stratum of AOV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10286 ACOT13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.05633 PCDHB15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.71108 Gastrointestinal cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.668 planum temporale, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.893031 stratum radiatum of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.47392 Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-8314-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1493 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.55671 BxPC-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.119 CUX1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A118-11A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Internal female genital organ TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.0 H4K20me1_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null layer V of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.16483 CMC4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.51141 primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.2212 Synovial sarcoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.71 Helab TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.749 NCI-H2373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.21908 UBE2F CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4231 MCF7 CCLE Cell Line Gene CNV Profiles -1.0 -1.79004 HaCaT cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.854 GSE144347_1_v_0_crnkl1_human RummaGEO Gene Perturbation Signatures 1.0 null H2BC14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29002 TOP3A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22237 SPI1-20176806-THIOMACROPHAGE-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Acute lymphoblastic leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.566 SW620 CCLE Cell Line Gene Expression Profiles 1.0 1.6602 nih 3T3 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.34557 intermediate part of r9B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16094 Umbilical vein endothelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.661 hsa-miR-660 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 hsa-miR-3613-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 MFSD5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.33585 JHH-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.874014 CI-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.13959 Bone sarcoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.094 lateral hypothalamic area, anterior region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.52171 Heart BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.27941 DMD_Deficiency_GDS2996_613_mouse_Cardiac muscles from 8-week (mdx animals) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null SAS cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.044 PMC10243915-uxad037_suppl_supplementary_table_s1b-table_s3b.pdf-481-ZNF425_ZNF425 Rummagene Transcription Factor Associations 2026 1.0 null Oral epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.48 ventrolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.27449 dorsolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.05398 dorsal nucleus of the lateral lemniscus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3587 NCIH1105 CCLE Cell Line Gene Expression Profiles 1.0 1.8602 liminal reticular formation of m2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.1504 Uveal melanoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.521 occipital pole, left, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.27406 Lung squamous cell carcinoma_LUSC_TCGA-85-8352-01A-31R-2326-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CNPY2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.143 cochlear nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.50331 ST6GALNAC6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.24864 Agranular insular area, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0683 Presubiculum, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.17591 Medulloblastoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.837 GPC4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32473 superior occipital gyrus, right, inferior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.43129 HS578T Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.692947 Malignant Head And Neck Neoplasm DisGeNET Gene-Disease Associations 1.0 null Nucleus of the solitary tract, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06822 Nucleus of the solitary tract, commissural part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.7736 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51T-06A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30944 JHH7 CCLE Cell Line Gene CNV Profiles 1.0 1.42684 EZH2_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Oral cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.493 Liver hepatocellular carcinoma_LIHC_TCGA-ED-A97K-01A-21R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COLO684 DepMap CRISPR Gene Dependency 1.0 11.9696 MKN28 DepMap CRISPR Gene Dependency 1.0 2.70664 Brain disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.206 intermediate stratum of isLim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.22353 CA3 field, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.03693 KDM5A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Neoplasm Metastasis DisGeNET Gene-Phenotype Associations 1.0 null Cancer stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.707 KMM-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.80082 Malignant exocrine pancreas neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.505 GLTP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.10776 AML193 CCLE Cell Line Gene Expression Profiles 1.0 1.93304 UCSD-242L Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.18972 anterior hypothalamic area, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.18967 dexamethasone_homo sapiens_gpl4133_gse42619 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null hsa-miR-1207-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 SCC-9 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.28 HUP-T4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.842162 Lung adenocarcinoma_LUAD_TCGA-75-7025-01A-12R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Squamous Cell Carcinoma DisGeNET Gene-Disease Associations 1.0 null Anterior olfactory nucleus, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38862 GSE216043_7_v_5_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null COLO741 CCLE Cell Line Gene CNV Profiles 1.0 1.57659 Colonic adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.859 SKM1 CCLE Cell Line Gene Expression Profiles -1.0 -1.78662 duodenum_4b HPA Tissue Sample Gene Expression Profiles 1.0 0.868849 Lymphoblastic leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.565 r7 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19253 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7406-11A-01R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MALSU1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.77489 RHEB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.06381 Perturb_7710_KO_VTRNA1_SRP252980 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.4158 Esophageal squamous cell carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.003 Acute lymphoblastic leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.734 Subcutaneous tissue TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.051 NCI-H1155 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.68674 Nervous system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.828 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A8HX-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-37-A5EN-01A-21R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null interstitial nucleus of Cajal, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.60978 TMEM131L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.65995 YAPC Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.88113 Whole body TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 Lymphatic system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.652 Perturb_11407_KD_HNRNPM_SRP143499 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 6.08931 amygdaloid complex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.741 H3K4me3_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Epithelial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.286 Acute Myeloid Leukemia_LAML_TCGA-AB-2914-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Colo-201 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.992 CFPAC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.1985 anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.86253 MZ in dorsomedial extrastriate cortex (V2) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.839634 UBB_KO_GDS3906_494_mouse_Testis - 21 Days GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null lateral nucleus of pulvinar Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.43799 Sarcoma_SARC_TCGA-LI-A9QH-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K36me3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 496100595_PCx_probable Alzheimer's disease_no TBI_95-99_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.30576 Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A6H8-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pharynx TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.013 gastrointestinal cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.127145 GSE191105_2_v_4_nat1_mouse RummaGEO Gene Perturbation Signatures -1.0 null SCC-4 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.992 Skin Cutaneous Melanoma_SKCM_TCGA-FS-A4F4-06A-12R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior orbital gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.848271 hsa-miR-548c-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 TARS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.4073 LEDGF_KD_GDS1580_249_human_293T cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.00557 VZ in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.3724 Urinary system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.596 Colonic cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.675 OPA3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.53061 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4988-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH226 DepMap CRISPR Gene Dependency 1.0 7.70854 Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70Q-01A-13R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Basidiobolomycosis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.406 Palate TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.355 subparafascicular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.17954 EGFR_drugactivation_30_GDS4361 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.878 ZR-75-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.864 Nasal cavity TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.153 ZNF274 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.1423 Cervical cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.752 ZNF429 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.04931 HCC202 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.08367 SP2_02_42 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 3.28951 hsa-miR-3176 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 SNU685 CCLE Cell Line Gene Expression Profiles -1.0 -1.6008 Urinary bladder cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.384 paralemniscal isthmic area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.5478 Head and Neck squamous cell carcinoma_HNSC_TCGA-P3-A6T4-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Common cardinal vein TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.675 H3K4me1_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null CGRP receptor complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.804 POU3F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.1846 SK-MEL-28 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.093 SW-626 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.567 Acute myeloid leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.137 CHST4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.2161 dorsolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.35325 Lung adenocarcinoma_LUAD_TCGA-62-8399-01A-21R-2326-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SW 1463 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.928705 Liver hepatocellular carcinoma_LIHC_TCGA-G3-A25U-01A-11R-A16W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Laryngeal squamous cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.233 ERBIN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.07122 r4 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03323 496100514_FWM_no dementia_TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.30546 HCC2911 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.19098 CPHXL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.45679 TP63-23658742-EP156T-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Sarcoma_SARC_TCGA-PC-A5DM-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lingula (I) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.15886 r8 part of the paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.35001 TC-71 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.04484 Nasopharyngeal carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.047 icSARA deltaORF6_30Hour_23365422_GSE33267 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.46912 lateral hypothalamic area, anterior region, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.16966 frontal pole, left, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.4012 Sense organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.344 NB-4 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.886 r8 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28803 C-33A cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.36 precentral gyrus, right, bank of the central sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.871134 NOB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9819 NCIN87 DepMap CRISPR Gene Dependency 1.0 2.92705 Cytoplasmic periphery of the nuclear pore complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.779 a2780cis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.529 SUDHL5 DepMap CRISPR Gene Dependency 1.0 3.15015 Keratinocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.483 PPARG-20176806-3T3-L1-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Lung adenocarcinoma_LUAD_TCGA-93-A4JQ-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100354_PCx_dementia_no TBI_84_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.27657 IZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.3443 Gastrointestinal system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.728 TFAP2A JASPAR Predicted Transcription Factor Targets 1.0 null hsa-miR-105 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 Prostate adenocarcinoma_PRAD_TCGA-KC-A7F6-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-A5HY-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3C12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.23482 Oropharynx TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.742 Integrin alphav-beta6 complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.155 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A4ND-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null lateral intermediate part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.10781 Fibrosarcoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.108 Ovarian carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.172 inner SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.918277 YMB-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.873601 cis-Golgi network COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.512 esophagus HPA Tissue Protein Expression Profiles -1.0 -1.18028 ZNF768 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.3894 Masseter TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.786 TMEM167A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.16284 anterior (rostral) cingulate (medial prefrontal) cortex_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.15519 Paragigantocellular reticular nucleus, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.35414 MLX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.26409 polymorphic layer of rostral subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.50331 A1CF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92122 RNF10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.02263 orbital frontal cortex_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.907096 hsa-miR-378g TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 Bcl-2 family protein complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.492 Drug-Induced Liver Injury CTD Gene-Disease Associations 1.0 1.13484 Carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.244 LCLC-103H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.90746 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4335-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Dok TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.33 SNU410 CCLE Cell Line Gene CNV Profiles -1.0 -2.75763 HCC515 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -3.12104 WDR24 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.5331 ZNF384 ENCODE Transcription Factor Targets 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I7-01A-21R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleus of the inferior collicular brachium, rostral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.18309 Lung squamous cell carcinoma_LUSC_TCGA-34-2600-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-1273d TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 KARPAS-45 COSMIC Cell Line Gene Mutation Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-69-7980-01A-11R-2187-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Esophageal epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.883 Tongue muscle TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.517 Head and Neck squamous cell carcinoma_HNSC_TCGA-BB-4223-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-VN-A88O-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Hmgn1_KO_GDS5010_405_mouse_liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null r8 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.23315 Oral mucosa TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.631 cuneus, right, striate Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07494 Magnocellular reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.36016 RAJI cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.741 HCC4011 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.22845 hsa-miR-606 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 Skin fibroblast cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.064 Liver hepatocellular carcinoma_LIHC_TCGA-CC-A8HS-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r6 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13491 Mouth floor TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.158 inferolateral temporal cortex (area TEv, area 20)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.961863 CP in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.91153 HT-29 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.757 KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.93172 KIAA0753 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.33345 NPIPB13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.81265 G84 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.66239 POLR3D CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.91454 PCNA complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.501 GATA3-21867929-TH1-MOUSE ChEA Transcription Factor Targets 2022 1.0 null HS 69ST Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.843657 medial part of r9B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.78025 Lung squamous cell carcinoma_LUSC_TCGA-90-A4ED-01A-31R-A24Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TMEM139 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.0277 testis_7f HPA Tissue Sample Gene Expression Profiles 1.0 1.81636 KDM5A ENCODE Transcription Factor Targets 1.0 null CL-11 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.37364 WFS1_KO_GDS4526_111_mouse_brain GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null HCC1395 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.915521 r9 part of nucleus gracilis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.12711 salivarygland_6c HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 r9 part of paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.191 intermediate part of r8B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00978 GAB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.5576 Nascent polypeptide-associated complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.377 KARPAS-1106P Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.01767 Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81E-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intermediate stratum of m2Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.97185 BXPC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.06036 Bile duct cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.116 FM3A cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.853 OVKATE CCLE Cell Line Gene CNV Profiles -1.0 -1.52815 Brain Lower Grade Glioma_LGG_TCGA-FG-8189-01B-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PK-59 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.1726 Glioblastoma multiforme cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.802 TIMM13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15935 Lung squamous cell carcinoma_LUSC_TCGA-56-8305-01A-11R-2296-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null p2 portion of the substantia nigra pars reticulata Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15668 CA46 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.07164 SIG-M5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.46125 Fibrosarcoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.241 NCI-H1693 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.916051 Sarcoma_SARC_TCGA-PC-A5DP-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ANKRD34B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.36296 H3K4me1_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null intermediate white layer of SC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28556 Antral mucosa TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.804 intermediate stratum of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2528 H3K36me3_megakaryocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FAM210B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.13367 Ovary cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.62 H3K36me3_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null JHH-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.26659 IZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.18209 JHOM2B CCLE Cell Line Gene CNV Profiles -1.0 -1.46186 Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KR-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.824 brain TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SK-N-DZ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null SHOC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.94487 Sublingual squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.81 H3K9me1_endothelial cell of umbilical vein_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SK-N-DZ Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.89418 Periodontal disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.288 Primary somatosensory area, lower limb, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13965 ventrolateral prefrontal cortex_35 pcw_F_12295 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.096 Lung cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.973 HIPK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.37417 RIGI CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.37906 SETD7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.80401 NCIH2444 CCLE Cell Line Gene Expression Profiles -1.0 -2.23698 PMC4591983__F5 PFOCR Pathway Figure Associations 2024 1.0 null NRBF2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.01893 Npas4 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 21.2288 Adenoid cystic carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.042 Female reproductive organ benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.474 NPR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.44648 amygdaloid complex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.22585 JC cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.554 HCC89 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.86045 Prostate adenocarcinoma_PRAD_TCGA-KK-A6E7-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GSE224157_2_v_1_doxorubicin_mouse RummaGEO Drug Perturbation Signatures -1.0 null periventricular stratum of r3Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.41634 Autoimmune disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.007 Fibroblastoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.241 SLC9A5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.79943 NCKAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.03164 COPS4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15546 BT16 DepMap CRISPR Gene Dependency 1.0 4.58763 NEUROG2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.2504 TCF7L2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.7736 Perturb_9137_KD_HMGB2_SRP106038 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 6.19592 NCI-H1975 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.862 Squamous Cell Carcinoma Of The Head And Neck DisGeNET Gene-Disease Associations 1.0 null H4K20me1_HeLa-S3_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Fibrosarcoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.188 H3K36me3_G1E-ER4_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null MCF-7 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.074 r8 part of lateral reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.09221 NAMALWA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.18597 HAPSTR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53655 Bipolar disorder GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.669897 pancreas BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.43999 GSE120595_5_v_4_arid2_mouse RummaGEO Gene Perturbation Signatures -1.0 null A-549 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.587 EZH2_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null L56Br-C1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.208 Aerial part TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.735 Lung non-small cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.84 PMC8020666-pnas.2015855118.sd11.xlsx-LPS_strongerResponse-Unnamed_13_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null ITGB1BP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.99918 primary somatosensory cortex (area S1, areas 3,1,2)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.41207 periventricular stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.60844 SARS-CoV MA15_Day1-PFU-10^3_None_GSE33266 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.88748 POLI CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.32041 ESRRB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.41459 MNX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.72992 Lower respiratory tract disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.977 JHH2 CCLE Cell Line Gene CNV Profiles 1.0 1.93502 Urinary bladder cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.023 Gastric cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.456 Mecom JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 22.963 TOX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.49941 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GI-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Musculoskeletal system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.48 enzalutamide_homo sapiens_gpl570_gse44905 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null CFAP20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.65209 T3M4 CCLE Cell Line Gene CNV Profiles 1.0 1.68871 RARA-24833708-LIVER-MOUSE ChEA Transcription Factor Targets 2022 1.0 null PLIN2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.0881 SCC-25 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.207 Myeloid leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.077 POLR2A_MCF-7_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null heart muscle HPA Tissue Gene Expression Profiles -1.0 -1.20507 III, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.61357 Superior colliculus, motor related, deep gray layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04301 CAL-33 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.263 Adult liver stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.075 Apoptotic body COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.45 Connective tissue disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.409 E2F6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.32315 primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.033 PRMT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.12756 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A3MF-01A-12R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZMPSTE24_Deficiency_GDS3775_506_mouse_Embryonic fibroblasts GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null RBX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78688 CELSR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.40129 DB Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.02661 OECM-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.37 cuneiform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.25785 Promonocytic leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.18 MAP1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.08219 CTBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.45785 SYO1 DepMap CRISPR Gene Dependency 1.0 4.43286 Prostate Carcinoma DisGeNET Gene-Disease Associations 1.0 null PDCL3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.27392 primary auditory cortex (core)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.06325 tcf3_20154672_cd4pos_cd8pos_thymocytes_thymus_lof_mouse_gpl6246_gse19923 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.146742 Ovarian disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.763 Carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.396 IL17RC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.60218 TIMM50 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.50593 layer I of piriform cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.13837 Piccolo NuA4 histone acetyltransferase complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.556 RAB11B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.73515 Agranular insular area, ventral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10802 Primary immunodeficiency disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.077 VMA21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84069 Lung fibroblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.339 MRC-5 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.648 PSMA3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.1513 primary visual cortex (striate cortex, area V1/17)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.13625 Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3471-01A-02R-1351-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LPAR3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.17642 hippocampus (hippocampal formation)_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.41086 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4327-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PAPSS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29065 JAG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.01973 posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.06023 CL11 CCLE Cell Line Gene CNV Profiles -1.0 -1.58293 Perturb_17823_KO_Kansl2_SRP225948 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.66664 deep white layer of SC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04585 CTNNB_Activation (deltaNB-cateninER transgenics)_GDS1560_767_mouse_Skin - 1 Day GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Disease of mental health DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.925 KMS20 CCLE Cell Line Gene CNV Profiles -1.0 -1.43284 embryonic stem feeder layer BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.998697 Lung adenocarcinoma_LUAD_TCGA-49-4510-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RPL5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.23927 Uterine disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.839 INAFM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.01593 Bone disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.252 Sarcoma_SARC_TCGA-IE-A4EK-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ludlu1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.342 r9 part of the lateral reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05419 FOS ENCODE Transcription Factor Targets 1.0 null Head and neck cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.607 posterior (caudal) superior temporal cortex (area 22c)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.25472 Skin Cutaneous Melanoma_SKCM_TCGA-EB-A5UM-01A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Thyroid gland disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.014 BHLHA15 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.9031 Perturb_12139_KD_PRPF38A_SRP093921 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 MMS22L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25164 H3K4me1_G1E-ER4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.497 NCIH1155 CCLE Cell Line Gene CNV Profiles 1.0 1.34068 JHH-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.908609 HEP-3B cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.201 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7J9-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0951 intermediate stratum of r6Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00387 Prdm5 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 27.0095 GSE88819_1_v_12_tug1_mouse RummaGEO Gene Perturbation Signatures -1.0 null Lung adenocarcinoma_LUAD_TCGA-44-7670-01A-11R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null parvocellular part of the r9LRt Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4591 layer 2 of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.56116 GSE179974_3_v_4_carboplatin_mouse RummaGEO Drug Perturbation Signatures -1.0 null layer 6a of PrS Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07262 M-1 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.880889 inferolateral temporal cortex (area TEv, area 20)_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.968237 Perturb_4911_KD_ATF7IP_SRP156289 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.70575 SLC38A10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.09981 inferolateral temporal cortex (area TEv, area 20)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.966689 T-47D Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.01852 Prostate cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.934 Colo-320 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.84 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4811-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Rectal cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.107 Cell envelope Sec protein transport complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.044 GSE116354,GSE117379_2_v_4_cox2_mouse RummaGEO Gene Perturbation Signatures -1.0 null ZNF410 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.0095 mantle zone of r8BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00978 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4824-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r9BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00055 HSC-4 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.862 Lung squamous cell carcinoma_LUSC_TCGA-56-8629-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAKI1 DepMap CRISPR Gene Dependency 1.0 2.32 periventricular stratum of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72167 Exocarp TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.557 Nucleus sagulum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.89129 TNRC6A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22434 CABLES1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9927 H3K4me2_CD14-positive monocyte_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null laterodorsal part of putamen Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.974537 GSE217541,GSE217543_0_v_2_tet1_human RummaGEO Gene Perturbation Signatures 1.0 null Tongue epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.239 SW-480 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.304 pancreas_6a HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.15519 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MV-06A-11R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CardiacMyocytes BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -2.09161 Kidney cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.498 Hs-578T cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.751 Amyloplast COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.653 HSF4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 37.1873 inner portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.926805 NBPF12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53091 Lung adenocarcinoma_LUAD_TCGA-86-A4D0-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Musculoskeletal system benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.476 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2IP-01A-11R-A180-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r10 part of the inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.49669 Oral cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.57 YAPC CCLE Cell Line Gene Expression Profiles -1.0 -1.55025 KB cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.118 STAT4 MotifMap Predicted Transcription Factor Targets 1.0 null Daltons lymphoma ascites TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.941 a24 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.595 IL17C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.13817 Parasubiculum, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.17384 LMNB2_02_191 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.62803 MDA-MB-453 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.7 intermediate stratum of m1AL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.52477 intermediate stratum of r10BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41396 FBXO48 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.08427 hsa-miR-4477a TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 GSE216043_10_v_2_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null Astrocytoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.525 hsa-miR-4473 TargetScan Predicted Conserved microRNA Targets 1.0 0.828473 SW 1573 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.826221 Benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.529 496100527_FWM_possible Alzheimer's disease_no TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.70481 OUS-11 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.764 DDB2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.65543 hsa-miR-548ae TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 H3K36me3_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dhd/k12/trb TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.544 rhombomere 9 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10641 POU2F2 JASPAR Predicted Transcription Factor Targets 1.0 null Sarcoma_SARC_TCGA-PC-A5DK-01A-11R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical adenocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.064 IFT46 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.9716 Thyroid BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.844074 Osteosarcoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.402 MSLN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.63673 OCI-LY-10 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.42203 H3K36me3_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hsa-miR-3674 TargetScan Predicted Conserved microRNA Targets 1.0 0.828473 ACHN cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.179 HCC515 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.86483 Prostate adenocarcinoma_PRAD_TCGA-EJ-8472-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null periventricular stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.94404 testis_7e HPA Tissue Sample Gene Expression Profiles 1.0 1.69183 Organ system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.736 APLN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76981 pancreas_6b HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.14629 SZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.897201 Orbital area, lateral part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18708 ht-29 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.686776 ZNF461 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.42581 SEPTIN10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.2412 LNZTA3WT4 DepMap CRISPR Gene Dependency 1.0 8.595 NR4A1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.9527 Hoxa11 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 18.5742 TFEC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.48425 Lymphoblastic leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.733 HCC202 CCLE Cell Line Gene CNV Profiles 1.0 2.30399 Tongue cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.195 periventricular nucleus, preoptic portion Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.14412 NB1 DepMap CRISPR Gene Dependency 1.0 2.14948 inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.883731 MDA-MB-435S cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.967 primary auditory cortex (core)_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.41086 Stomach disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.793 H3K36me3_Brain Mid Frontal Lobe Roadmap Epigenomics Histone Modification Site Profiles 1.0 null epithelioma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.058254 Presubiculum, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.76935 CENPX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.287 colonic cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.414673 Perturb_2121_KD_PRMT5_SRP276651 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -1.50432 ESR1_KD_GDS4065_452_human_MCF7 estrogen-sensitive breast cancer cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6365-11A-01R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Salivary gland tumor cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.778 Laryngeal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.984 Lung squamous cell carcinoma_LUSC_TCGA-O2-A52W-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Colo-205 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.169 H3K4me1_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null PKNOX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.01818 Acute Myeloid Leukemia_LAML_TCGA-AB-2904-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Ca9-22 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.432 Mesothelioma_MESO_TCGA-LK-A4O4-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MERO82 DepMap CRISPR Gene Dependency 1.0 3.04029 dorsal paracommissural tectal nucleus, m1 part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26375 molecular_function GO Molecular Function Annotations 2015 1.0 null NCIH524 CCLE Cell Line Gene Expression Profiles 1.0 1.52152 alphaV-beta3 integrin-EGFR complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.816 Acute Myeloid Leukemia_LAML_TCGA-AB-2807-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Neuroblastoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.439 GATA6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.0277 FAN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45107 Pek TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.659 hsa-miR-4282 TargetScan Predicted Conserved microRNA Targets 1.0 0.248923 GSE201239_6_v_1_fmr1_mouse RummaGEO Gene Perturbation Signatures 1.0 null liminal part of the r10 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29512 Female reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.977 HO-1-u-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.81 hsa-miR-4695-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 CLEC14A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4483 GSE88819_6_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null H3K4me1_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null lingual gyrus, right, peristriate Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.828238 Adrenocortical carcinoma_ACC_TCGA-OR-A5JJ-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF737 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92852 GTPBP6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.00901 hsa-miR-3171 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 Urinary bladder cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.544 CAL51 CCLE Cell Line Gene Expression Profiles 1.0 1.53354 Perturb_257_KD_KLF6_SRP150445 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 4.2476 cuneate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.936567 angular gyrus, right, superior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.848142 H3K36me3_splenic B cell_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KMS-12-PE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.25243 NCI-H2803 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.983493 Tongue cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.961 Malignant ovarian surface epithelial-stromal neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.171 periventricular stratum of r9Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2797 intermediate stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.74921 Sox6 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.4418 P12-ICHIKAWA cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.658 H3K27ac_B cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null rectal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.445653 SOX2-27498859-CHIP-SEQ-STOMACH-MOUSE ChEA Transcription Factor Targets 2022 1.0 null MRPL12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.08904 TTYH3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.64705 Prostate adenocarcinoma_PRAD_TCGA-VN-A88Q-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAPAN-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.617 Large cell lung cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.889 H2BK20ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null p3x63ag8u.1 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.128 COLO 829 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.37812 Perturb_2728_KD_NEK2_SRP231163 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.78239 Reproductive organ benign neoplasm DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.467 SK-CO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.08832 501A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.97283 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7CG-01A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COR-L279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.858587 Cervix disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.749 ARHGAP45 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.08876 Brain Lower Grade Glioma_LGG_TCGA-HT-7688-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Tongue squamous cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.673 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4849-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null JURKAT DepMap CRISPR Gene Dependency 1.0 2.05582 PABPC1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.30085 721_B_lymphoblasts BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.874486 YY1 JASPAR Predicted Transcription Factor Targets 1.0 null primary auditory cortex (core)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.0828 HSF1 ChEA Transcription Factor Targets 1.0 null NCI-H226Br cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.884 Disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.549 Laryngeal cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.0 Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A894-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bone Destruction DisGeNET Gene-Disease Associations 1.0 null Bone cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.266 H3K36me3_megakaryocyte_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null SRPK2 Pathway Commons Protein-Protein Interactions 1.0 null Hepatoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.942 Lung squamous cell carcinoma_LUSC_TCGA-60-2703-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-7874-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null EBPL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.01917 p1 part of the substantia nigra reticulata Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02582 r10 part of nucleus gracilis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.01837 H3K9ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null superficial stratum of VTTh Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.32815 mediodorsal nucleus of thalamus_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.07161 IRS4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.99104 Breast cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.168 Ovarian serous adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.714 GSE216043_10_v_5_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null Sensory system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.13 Mammary gland cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.519 ZNF384_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4349-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null animal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052463 CNOT9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.64595 Lung adenocarcinoma_LUAD_TCGA-L9-A443-01A-12R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dentate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.930234 SNUC4 DepMap CRISPR Gene Dependency 1.0 2.06923 Transitional cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.701 Foreskin fibroblast cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.129 496100485_PCx_possible Alzheimer's disease_no TBI_100+_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.12165 POLR2A_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE214442_0_v_1_pak4_mouse RummaGEO Gene Perturbation Signatures -1.0 null Ovarian serous carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.004 RSC96 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.785 LN-229 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.36027 Hypopharynx TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.784 amygdalostriatal transition area Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.1016 HEC6 CCLE Cell Line Gene Expression Profiles 1.0 2.3722 MT-4 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.01 MDAMB157 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.08871 T-lymphoblastic leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.566 ADAM10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15958 hsa-miR-10b TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 skmel30 HPA Cell Line Gene Expression Profiles -1.0 -1.37431 Ookinete TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.592 NEK8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.93589 mantle zone of r10Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29574 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Endometrial cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.046 Y-79 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.515 MDAMB435S CCLE Cell Line Gene CNV Profiles 1.0 1.67026 STX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.44238 posteroventral (inferior) parietal cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.84177 Cheek pouch TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.995 amygdaloid complex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.991576 posteroventral (inferior) parietal cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.13482 Colorectal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.87 LS123 DepMap CRISPR Gene Dependency 1.0 2.54831 H3K36me3_cardiac mesoderm_hg19_6 ENCODE Transcription Factor Binding Site Profiles 1.0 null posterior (caudal) superior temporal cortex (area 22c)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.18718 Esophageal carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.154 OVCAR-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.02431 embryonic stem no feeder BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.21379 H3K9ac_Peripheral Blood Mononuclear Primary Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Bipolar I disorder GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.652288 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A5U8-01A-11R-A28M-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_A549_hg19_2 ENCODE Histone Modification Site Profiles 1.0 null FOS_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYBL2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.5685 pyrazinamide_mus musculus_gpl6246_gse48027 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null NCI-H2135 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.23346 Squamous epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.783 mantle zone of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.80224 POLR2A_K562_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Hepatoma HLE cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.754 GSE88819_0_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null Hemangioendothelioma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.652 ZNF132 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.99372 posterior (caudal) superior temporal cortex (area 22c)_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.903206 medial part of r7B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30853 CAOV3 CCLE Cell Line Gene CNV Profiles 1.0 2.60026 YMB1 CCLE Cell Line Gene CNV Profiles -1.0 -1.3348 Glioblastoma multiforme cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.232 Perturb_12140_KD_PRPF8_SRP093921 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 orbital frontal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.57302 Lung adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.178 lymphnode_4a HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 GSE243491_1_v_2_oxaliplatin_mouse RummaGEO Drug Perturbation Signatures -1.0 null ZNF607 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.63114 IZ in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.65154 BRD9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37994 hsa-miR-4420 TargetScan Predicted Conserved microRNA Targets 1.0 0.632343 ZNF670 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.47766 TATDN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.065 PPARG ChEA Transcription Factor Targets 1.0 null lateral mammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.04264 Anterior olfactory nucleus, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12163 LAN2 DepMap CRISPR Gene Dependency 1.0 4.85208 Epidermis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.37 thyroid gland HPA Tissue Protein Expression Profiles 1.0 0.957004 COPG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.65601 TP63-23658742-EP156T-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null KDM4C_natural variation_GSE41040_588_human_fibroblasts fron neonatal foreskin GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GSE60837_0_v_4_bcl9_mouse RummaGEO Gene Perturbation Signatures 1.0 null Pharyngeal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.109 NUGC2 CCLE Cell Line Gene Expression Profiles -1.0 -2.59092 hsa-miR-548s TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 Acute leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.16 H4K91ac_IMR90 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Antropyloric mucosa TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.835 MZT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.7391 YMB-1-E COSMIC Cell Line Gene Mutation Profiles 1.0 null PFKP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.52869 OCT4-20526341-ESCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null DNAAF10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68526 Cardiovascular system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.126 OLIG2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.0713 Brain Lower Grade Glioma_LGG_TCGA-DU-A7TI-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r3 roof plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.42502 RPP25 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.24578 NSA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.25395 NCIH292 CCLE Cell Line Gene Expression Profiles -1.0 -2.70246 JHH-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.13717 GATA4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.377 Esophageal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.16 SAS acetyltransferase complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.545 layer 1 of PrS Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.78939 NCI-H2373 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.31331 heart_5b HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 striatum_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.961863 H3K36me3_CH12.LX_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null OLIG3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.2545 GSE180185_4_v_1_setbp1_human RummaGEO Gene Perturbation Signatures -1.0 null r7 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.68994 HOXC9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.1195 Cervical Squamous Cell Carcinoma DisGeNET Gene-Disease Associations 1.0 null SK-MES-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.22442 TJP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.0452 GR-ST COSMIC Cell Line Gene Mutation Profiles 1.0 null COLO 792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.36027 Perturb_12725_KO_MITF_SRP255094 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 2.29575 496100573_HIP_no dementia_no TBI_81_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.05735 NMuMg cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.588 spleen BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.10671 GSE100293_0_v_3_apelin_mouse RummaGEO Drug Perturbation Signatures 1.0 null fusiform gyrus, right, bank of cos Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.885109 CACO-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.401 CaSki cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.309 JPH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.02358 Endocrine gland cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.03 hsa-miR-4711-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 Tooth TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.427 Glucose metabolism disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.088 HMGXB3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.70038 Adrenocortical carcinoma_ACC_TCGA-OR-A5JF-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3JB-06A-11R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain Lower Grade Glioma_LGG_TCGA-HT-8019-01A-21R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DAOY cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.799 MAML2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.20531 GLC-82 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.651 SEC24A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87207 Sarcoma_SARC_TCGA-DX-A6B7-01A-11R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null medial habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.04564 SHISA5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.47714 SU-DHL-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.08988 H3K36me3_CD34 Cultured Cells Roadmap Epigenomics Histone Modification Site Profiles 1.0 null dorsolateral prefrontal cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.09933 LAMTOR3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.51372 C6 glioma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.057 Cytosolic proteasome complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.569 MDS - Myelodysplastic syndrome_Bone marrow stem cell_GSE4619 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.5303 HSF1-23293686-STHDH_STRIATAL-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null smallintestine_4a HPA Tissue Sample Gene Expression Profiles 1.0 1.09408 H3C8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.6524 FBLL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.5269 Lung adenocarcinoma_LUAD_TCGA-MP-A4TF-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary motor cortex (area M1, area 4)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.73054 Kidney renal clear cell carcinoma_KIRC_TCGA-B4-5832-01A-11R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.49471 POLR2K CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96443 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4844-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-63-A5MW-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null periventricular stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.88294 Egg chorion COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.538 Squamous cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 3.46 Stat5a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.8276 Tongue Carcinoma DisGeNET Gene-Disease Associations 1.0 null GSE186810,GSE186813_2_v_5_furin_mouse RummaGEO Drug Perturbation Signatures 1.0 null Erythroleukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.248 NCI-H2081 COSMIC Cell Line Gene Mutation Profiles 1.0 null Sarcoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.309 Breast carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.697 inferolateral temporal cortex (area TEv, area 20)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.57304 Respiratory system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.124 Lung squamous cell carcinoma_LUSC_TCGA-85-A510-01A-11R-A26W-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventral paracommissural tectal nucleus, m1 part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16779 Gingival cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.459 hs913t TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.121 Prostate adenocarcinoma_PRAD_TCGA-EJ-A7NH-01A-12R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bae TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.558 hsa-miR-3177-5p TargetScan Predicted Conserved microRNA Targets 1.0 0.90397 Lung adenocarcinoma_LUAD_TCGA-62-A46V-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Stat5b JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.9268 LP1 DepMap CRISPR Gene Dependency 1.0 2.07557 Gingival epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.08 COV413B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.62774 BGC-823 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.792 PAGE4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.45006 CTNNB_Activation (deltaNB-cateninER transgenics)_GDS1560_766_mouse_Skin - 0 Day GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null primary visual cortex (striate cortex, area V1/17)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.00275 FLI1-21867929-CD8-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Berry TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.972 Integumentary system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.497 thyroid BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.12313 dr9 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.594 Type III intermediate filament COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 2.003 NCIH2228 CCLE Cell Line Gene CNV Profiles -1.0 -1.57866 H3K36me3_cardiac mesoderm_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Uterine fibroid DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.136 HERC4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.5783 ARF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.56127 JUNB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.5205 SNX27 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31337 DLD-1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.291 Bladder disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.538 Lung cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.771 colorectal cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.152355 ISL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46679 CCNB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.67355 laminin-5 complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.075 layer 3 of AOD cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10479 JHH-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.82413 Central nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 ZNF180 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.81829 Malignant astrocytoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.639 hippocampus (hippocampal formation)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.893432 Liver hepatocellular carcinoma_LIHC_TCGA-G3-A7M9-01A-23R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null vx2 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.527 Sarcoma_SARC_TCGA-DX-A2J0-01A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PPP1R35 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82052 Ovary cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.6 Musculoskeletal system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.541 SAP30 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.46451 JRK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.59812 Lung squamous cell carcinoma_LUSC_TCGA-77-8128-01A-11R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-4117-01A-02R-1351-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HS-SULTAN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.4199 Sarcoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.584 KLF9_Deficiency_GDS2703_647_mouse_Jejuna - intestine GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Rectal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.869 r10 part of vagal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.46436 CDK2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47266 hela HPA Cell Line Gene Expression Profiles 1.0 1.46746 stomach HPA Tissue Protein Expression Profiles -1.0 -1.18028 SCARA3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.63412 Perturb_9928_KD_SRSF7_SRP013565 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 1.74314 Kidney renal papillary cell carcinoma_KIRP_TCGA-B3-4104-01A-02R-1351-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45794 GSE182680,GSE182683_10_v_2_dexamethasone_human RummaGEO Drug Perturbation Signatures -1.0 null ZNRD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.5505 UT-SCC-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.871 Vascular disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.056 LSS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25209 protein binding GO Molecular Function Annotations 2015 1.0 null HCC1143 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.00323 GSE195559_8_v_5_notch1_human RummaGEO Gene Perturbation Signatures -1.0 null Colonic adenocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.025 NANOG-20526341-ESCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Leukemia cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.168 HOXC12 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.8005 intermediate stratum of m1AD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16719 periventricular stratum of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.42513 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4161-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null amygdaloid complex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.61637 Myoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.908 PSME3IP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.73374 microcellular tegmental nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.54578 Skin Cutaneous Melanoma_SKCM_TCGA-BF-A5EP-01A-12R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Laryngeal squamous cell carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.52 ventrolateral prefrontal cortex_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.33452 Perturb_2526_KD_ZRANB2_SRP185438 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -7.33712 PE01 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.928705 SW-620 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.321 GSE211989_3_v_2_nlrc3_mouse RummaGEO Gene Perturbation Signatures -1.0 null dorsomedial preoptic area, superficial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05854 KLN205 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.547 Fatty Liver CTD Gene-Disease Associations 1.0 1.11809 DES_KO_GDS4804_171_mouse_young skeletal muscles GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GRANTA-519 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.24486 Biliary tract cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.217 Bpe TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.811 r6 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08238 H3K36me3_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SK-MEL-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 3.19301 Liver carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.862 VPS9D1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82341 HAUS5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30281 posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.16814 Kidney cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.111 intermediate stratum of p1Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14641 CAL33 DepMap CRISPR Gene Dependency 1.0 2.14479 Oral epithelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.267 TRMT2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.49963 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-06A-22R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null WM983B CCLE Cell Line Gene Expression Profiles 1.0 1.46976 Lung adenocarcinoma_LUAD_TCGA-86-7955-01A-11R-2187-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null p22 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.524 Human papillomavirus infectious disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.239 M cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.421 SHROOM3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.44439 layer 1 of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.60844 A4FUK CCLE Cell Line Gene CNV Profiles 1.0 1.60405 Skin cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.493 Colon cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.946 Colorectal adenocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.112 Tongue epithelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.973 SF172 CCLE Cell Line Gene Expression Profiles -1.0 -1.464 magnocellular division of VA Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.956976 Prostate gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.884 pontine nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.916688 PrefrontalCortex BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.02678 Orbital area, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13287 hsa-miR-4645-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.13535 bs1b4 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.405 NCIH1869 CCLE Cell Line Gene CNV Profiles 1.0 1.55993 BHY cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.883 KCI-MOH1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.828125 Bladder Urothelial Carcinoma_BLCA_TCGA-ZF-A9RL-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DCAF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.90521 Hep-G2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.937 Hmga1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 26.0856 adenocarcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.06254 Brain Lower Grade Glioma_LGG_TCGA-HT-8109-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null A2780 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.16639 COLO 849 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.33638 u266 HPA Cell Line Gene Expression Profiles 1.0 0.878307 EPLC-272H Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.12307 B16-F1 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.734 HUPT3 CCLE Cell Line Gene CNV Profiles -1.0 -1.35106 MKN-45 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.14793 Carbohydrate metabolic disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.085 GSE164135,GSE164137_0_v_1_fbxw7_mouse RummaGEO Gene Perturbation Signatures -1.0 null A-253 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.584 GSE186810,GSE186813_2_v_5_furin_mouse RummaGEO Gene Perturbation Signatures 1.0 null NCI-H1693 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.86965 L-5178-Y cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.011 Rectum adenocarcinoma_READ_TCGA-EI-6509-01A-11R-1736-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null STK25 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.40884 Perturb_1687_KO_Kmt2c_SRP283007 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.90494 periventricular stratum of r6BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30199 SMAD4-21741376-EPCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Stratum spinosum TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.463 COLO678 CCLE Cell Line Gene CNV Profiles -1.0 -2.2303 A375SKINCJ3 DepMap CRISPR Gene Dependency 1.0 5.63339 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-PN-A8MA-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null icSARS CoV_30Hour_23365422_GSE33267 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.20185 tissues, cell types and enzyme sources TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052215 HEC251 CCLE Cell Line Gene Expression Profiles 1.0 1.75777 Serous adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.674 TGIF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.28901 SUM44PE Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.58737 Prostate adenocarcinoma_PRAD_TCGA-V1-A8MU-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.37673 Adrenocortical carcinoma_ACC_TCGA-OR-A5J1-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r5 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.15495 lm8 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.88 CDCA8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.38089 dorsolateral prefrontal cortex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.36081 SK-N-AS Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.63363 Lichen planus DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.335 H3K4me1_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null RFC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.72842 primary visual cortex (striate cortex, area V1/17)_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.02963 SNX12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.8061 Osteoblastoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.644 hsa-miR-3674 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 nucleus GO Cellular Component Annotations 2023 1.0 null Acute Myeloid Leukemia_LAML_TCGA-AB-2912-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4739-01A-02R-1514-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null JJ012 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.973 reticular formation of p1Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1471 SKMEL2 CCLE Cell Line Gene CNV Profiles 1.0 3.27404 SHSY5Y CCLE Cell Line Gene CNV Profiles -1.0 -2.16635 mediodorsal nucleus of thalamus_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11497 Urinary bladder carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.024 EEF2KMT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.2629 POLR2A_endothelial cell of umbilical vein_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Gastrointestinal system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.839 Stomach cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.807 KYSE-30 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.505 CGREF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.92742 RVH421 CCLE Cell Line Gene CNV Profiles 1.0 1.83326 MG-63 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.266 anterior pretectal nucleus, ventral superficial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.70212 FSBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.95183 C32TG Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.04976 Nucleus ambiguus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03416 SKN3 DepMap CRISPR Gene Dependency 1.0 7.07625 inferior frontal gyrus, opercular part, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.46435 intracellular membrane-bounded organelle GO Cellular Component Annotations 2025 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-21-1082-01A-01R-0692-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-Q1-A73P-01A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Rectum adenocarcinoma_READ_TCGA-AF-2687-01A-02R-1736-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ESPN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.00622 whole body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.052464 alimentary canal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.087156 JHU-011 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.308 r10 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.5822 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JD-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Perturb_8462_KO_IFNLR1_ERP121014 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 9.67898 RAD54B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.38857 16872506-SuppTable1 GeneSigDB Published Gene Signatures 1.0 null G22 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.997986 Basal cell carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.558 BCL2L12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.02405 Sto TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.567 Central nervous system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.691 BT-20 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.045 p2189 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.149 HCT-8 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.683 dorsal thalamus_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.9212 CCT7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.91454 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7091-11A-01R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null LDHD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.57969 NIH:OVCAR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.83915 H3K36me3_liver_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null medial part of r6B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01745 primary somatosensory cortex (area S1, areas 3,1,2)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.953833 Brain cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.51 HSPG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.3176 Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZK-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4775 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 Prostate carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.109 BFAR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.36672 posteromedial visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.26492 501A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.908362 H3K36me3_megakaryocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EXO5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15826 PMC5047620__F6 PFOCR Pathway Figure Associations 2024 1.0 null MOLT-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.815 Apoptosome COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.04 GRSF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.20003 medial vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.60333 NPLOC4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.3894 epididymis HPA Tissue Protein Expression Profiles 1.0 0.957004 Lymphatic endothelial cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.954 C1R CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.1182 Colorectal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.873 HCC1588 CCLE Cell Line Gene Expression Profiles -1.0 -1.52219 PL45 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.928705 Perturb_3253_KD_RPS19_SRP092068 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -2.24871 PAFAH1B1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.24394 MNX1-26342078-MIN6-4N-MOUSE ChEA Transcription Factor Targets 2022 1.0 null hsa-miR-576-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 Gata3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 23.2773 hsa-miR-3922-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 MOGGUVW DepMap CRISPR Gene Dependency 1.0 3.85495 GSE224969,GSE224971_3_v_5_chtop_mouse RummaGEO Gene Perturbation Signatures 1.0 null Urinary bladder transitional cell carcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.703 Pancreatic adenocarcinoma_PAAD_TCGA-HZ-8638-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior (caudal) superior temporal cortex (area 22c)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.1669 H3K4me1_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null posteroventral (inferior) parietal cortex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.32151 MDA-MB-468 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.076 HUP-T3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03947 ASCL4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.73055 Dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08747 CALU CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.61361 SPI1_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null WTX_OE_GDS4802_325_human_HEK293 embryonic kidney cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Lung adenocarcinoma_LUAD_TCGA-91-6831-01A-11R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null USP39 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.44717 Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MO-06A-11R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null XRN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.67227 Perturb_1354_OE_U11_SRP314103 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -11.0338 SARM_KO_GDS4842_412_mouse_brain GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null ASXL3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37099 r10 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.08818 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4974-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BEX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.18254 H3K79me1_H9 Roadmap Epigenomics Histone Modification Site Profiles 1.0 null Secondary Malignant Neoplasm Of Lymph Node DisGeNET Gene-Disease Associations 1.0 null SPHK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32639 C32 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.03386 pontine raphe nucleus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.897017 Pancreatic cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.591 lateral hypothalamic area, mammillary region, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.27337 SKRC20 CCLE Cell Line Gene Expression Profiles -1.0 -2.04866 Osteoclastoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.056 PSMD10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.68968 primary visual cortex (striate cortex, area V1/17)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11877 IZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.2338 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4351-01A-01R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null periventricular stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.63861 dorsal thalamus_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.31377 UKE-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.84534 external segment of globus pallidus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.885066 METRN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.46059 intestine TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.128044 Ovary cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.478 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4635-01A-02R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.861 H3K36me3_Skeletal Muscle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null dorsal cortical nucleus of inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1163 HT-115 COSMIC Cell Line Gene Mutation Profiles 1.0 null GSE119978,GSE180930_0_v_5_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null Bone cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.566 SKMEL28 CCLE Cell Line Gene CNV Profiles 1.0 1.65406 Nasopharynx TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.084 GATM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.46227 Cholangiocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.084 Ovary epithelial cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.197 RPMI-2650 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.009 HCC461 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.85524 mantle zone of AOV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1022 Pharyngeal cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.111 H3K36me3_Brain Hippocampus Middle Roadmap Epigenomics Histone Modification Site Profiles 1.0 null NA cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.903 SG in primary auditory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.18974 r5 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.74286 PMC8020666-pnas.2015855118.sd11.xlsx-LPS_attenuatedResponse-Baboon_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null SHMT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.26769 layer 6 of PrS Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07201 CUX1 ENCODE Transcription Factor Targets 1.0 null hsa-miR-548x TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 Esophagus - Gastroesophageal Junction GTEx Tissue Gene Expression Profiles 2023 1.0 7.17825 Nucleoplasmic periphery of the nuclear pore complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.789 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J8-06A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Primary cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.823 H3K4me1_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18217 Mammary gland tumor cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.52 HCC2885 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.916051 HUP-T3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.87222 H3K79me2_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null hsa-miR-4766-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.18564 TCAIM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.02017 SEC31B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.32043 Liver hepatocellular carcinoma_LIHC_TCGA-RC-A6M3-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU-475 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.981291 anterior (rostral) cingulate (medial prefrontal) cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.38822 Lymphocytic leukemia cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.603 integument TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.053118 Agranular insular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11254 Synovial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.519 MAPK14_KO_GDS2693_535_mouse_liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Thymus-innate lymphoid cell Tabula Sapiens Gene-Cell Associations 1.0 4.07328 MESSA CCLE Cell Line Gene Expression Profiles 1.0 1.43155 H3C7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.19464 mantle zone of m1AD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1907 Kidney Chromophobe_KICH_TCGA-KL-8346-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-SI-A71Q-01A-12R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RAB1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37325 posteroventral (inferior) parietal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.911583 midline nuclear complex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.21873 gastrointestinal tract TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.104584 GPATCH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.62383 H3K36me3_ES-Bruce4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCI-H2810 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.05634 CEP43 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.46321 GSE248858_6_v_2_tcpobop_mouse RummaGEO Drug Perturbation Signatures -1.0 null superficial stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.44831 Ovary BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.43689 heart_6b HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 retromammillary area, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38576 cerebellar cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.32345 TIMM10B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.03412 Mucoepidermoid carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.015 H3K36me3_Brain Substantia Nigra Roadmap Epigenomics Histone Modification Site Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.94414 HOXD12 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.1508 CRTAP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.10523 Esophageal squamous epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.504 PHLDA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.23461 EIF4G2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02295 GSE149075_3_v_5_foxa2_mouse RummaGEO Gene Perturbation Signatures -1.0 null Head and neck squamous cell carcinoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.51 r3 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.41993 Prostate adenocarcinoma_PRAD_TCGA-EJ-A7NG-01A-31R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IGR-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null hsa-miR-3671 TargetScan Predicted Conserved microRNA Targets 1.0 0.241055 NSUN6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02265 SNRPG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.3201 H3K4me1_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null ROM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.44668 intermediate stratum of r6BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01433 hsa-miR-548aj TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 Prostate adenocarcinoma_PRAD_TCGA-EJ-A8FN-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4795-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 intermediate stratum of SC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03471 Glucose dbGAP Gene-Trait Associations 1.0 0.162486 paracentral lobule, posterior part, right, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -3.19092 USP51 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.585 colorectum TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.148527 NCI-H292 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.644 Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-6221-01A-11R-2081-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null salivary gland HPA Tissue Protein Expression Profiles -1.0 -1.18028 internal cortical nucleus of inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11908 dorsolateral prefrontal cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.60896 temporal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.48153 abnormal skin morphology IMPC Knockout Mouse Phenotypes 1.0 null FARSA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37292 globose nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.27842 NEUROD2-26341353-CORTEX-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Anterior olfactory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.19684 HCC70 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -1.703 Cell type cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.861 Jaw cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.129 IGR-37 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.859658 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-XS-A8TJ-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null pancreas HPA Tissue Gene Expression Profiles -1.0 -1.95952 BHLHE23 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.452 arcuate nucleus of the hypothalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.06728 Breast adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.645 Gastric adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.964 Lung squamous cell carcinoma_LUSC_TCGA-56-7730-01A-11R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SKNSH CCLE Cell Line Gene CNV Profiles -1.0 -2.11203 HN-12 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.081 PTOV1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.82067 small intestine HPA Tissue Gene Expression Profiles 1.0 1.74316 Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9IL-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null layer 2 of PaS Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05732 TTC3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.95414 Pancreatic ductal adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.176 OLIG1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.5041 raphe magnus nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.10604 colorectal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.445653 L3HYPDH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.16906 MEL-HO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.04939 BAK complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.509 SG in posterior frontal cortex (motor cortex) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.29163 Adrenocortical carcinoma_ACC_TCGA-OR-A5JS-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null colorectal adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.460692 layer 1 of AOV cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04494 H2AFZ_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null POLR2A_MCF 10A_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-LB-A7SX-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney Chromophobe_KICH_TCGA-KN-8432-11A-01R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Melanoma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.79 Medial geniculate complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.19544 RAB3A_Mutation - D77G point mutation_GDS2482_702_mouse_Cortex GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null hsa-miR-140-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 Sensory system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.093 769-P Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 0.841703 hsa-miR-4716-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 hsa-miR-4292 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 Mel-18_KD_GDS2724_103_human_DAOY medulloblastoma cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null superficial stratum of r8BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.17816 hsa-miR-607 TargetScan Predicted Conserved microRNA Targets 1.0 0.517189 NCI-H322 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.637 RIPOR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.92648 Intestinal cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.917 C32 CCLE Cell Line Gene CNV Profiles 1.0 1.36874 HT-115 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Mutation Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.0606 CAL-148 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles -1.0 -0.89881 Regio oralis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.93 anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.83629 epithelium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.054302 Hnf1a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.4516 ventrolateral prefrontal cortex_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.00952 WEHI-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.68 Lung adenocarcinoma_LUAD_TCGA-91-6830-01A-11R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHD1 ENCODE Transcription Factor Targets 1.0 null G111 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.2653 Brain Lower Grade Glioma_LGG_TCGA-TM-A84R-01A-21R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Hypopharynx cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.415 MDA-MB-453 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.934785 KCTD10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.12814 Agranular insular area, ventral part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05612 SKOV-3 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.458 primary auditory cortex (core)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.863474 SHC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.18303 Nucleus of the solitary tract Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06939 PPARG-20887899-3T3-L1 PREADIPOCYTE CELLS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GDE1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.78109 H3K4me1_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null YMB-1-E Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.873601 Anterior olfactory nucleus, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20459 TR-146 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.803 r7 part of the dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.60844 H3K4me1_mononuclear cell_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null LARGE2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.83741 striatum_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.0606 IZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.661 Disease by infectious agent DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.321 Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U9-06A-11R-A32P-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SKNAS CCLE Cell Line Gene CNV Profiles -1.0 -1.57554 KLE DepMap CRISPR Gene Dependency 1.0 3.45097 NAT8L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.22009 AGS cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.943 PMC11949941-DataSheet1.pdf-48-MESP1_MESP1 Rummagene Transcription Factor Associations 2026 1.0 null medial mammillary nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.82806 Acute myeloid leukemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.346 Renal cell carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.408 Diabetes mellitus DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.076 GSE113267_0_v_1_rfx7_mouse RummaGEO Gene Perturbation Signatures 1.0 null TOMM22 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.13284 FAM156B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.02947 KNS81 CCLE Cell Line Gene CNV Profiles -1.0 -1.5206 rostral part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.935966 rectum TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.157651 Acute Myeloid Leukemia_LAML_TCGA-AB-2975-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null liver_c HPA Tissue Sample Gene Expression Profiles -1.0 -1.08911 ATP11C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.18733 Pleural mesothelioma cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.732 PTX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.62561 Gingival cancer cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 2.463 ZSCAN16 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.6925 ETFDH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.18966 UM-SCC-17B cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.642 LS-180 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.635 MCM6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.17309 dms53 TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.674 ZNF10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.18543 TMEM125 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.896 r7 part of the nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.4061 RPMI-8226 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.819 496100443_HIP_no dementia_TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.41342 NCI-H2198 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.988271 COLO 829 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles 1.0 1.90522 Nasopharynx carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.42 HCC2935 CCLE Cell Line Gene CNV Profiles 1.0 1.44515 Retinoblastoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.519 SG in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.47252 DAUDI cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.764 r10 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.94125