association	dataset	threshold value	standardized value
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.83724
SUZ12_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
STAT5-23275557-MAMMARY-EPITHELIUM-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18398
16778221-Table2	GeneSigDB Published Gene Signatures	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4985-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
plasma membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
Infertility, Male	CTD Gene-Disease Associations	1.0	1.10803
variants	GeneRIF Biological Term Annotations	1.0	null
Weight Loss	CTD Gene-Disease Associations	1.0	1.13075
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5453-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
premonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.648127
kg-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.35743
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052424
NCIH1105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76448
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.01399
NCIH2106	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57303
sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.051562
HDAC6_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.310783
trachea	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.28531
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
trans-golgi network	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.179459
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58968
abnormal sleep behavior	IMPC Knockout Mouse Phenotypes	1.0	null
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
irinotecan_rattus norvegicus_gpl1355_jejunum_gds3466	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
peritoneal exudate	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.275094
primary bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.045475
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YW-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS 69ST	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942725
Kidney Chromophobe_KICH_TCGA-KN-8419-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
High-endothelial venule (HEV) cell_Blood vessel_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37458
Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3467-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47373
NANOG-16518401-MESC-mouse	ChEA Transcription Factor Binding Site Profiles	1.0	null
corneal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.523045
H3K27me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078425
yy1_22711985_skeletal_muscle_lof_mouse_gpl8321_gse39009	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.112578
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47696
corneal dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.920085
LN-229	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963382
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09566
A4FUK	CCLE Cell Line Gene CNV Profiles	1.0	2.38251
FOS_MCF 10A_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.224884
Kidney Chromophobe_KICH_TCGA-KN-8431-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR3C1	JASPAR Predicted Transcription Factor Targets	1.0	null
eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.055899
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071782
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.863419
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46006
Immune System	Reactome Pathways 2014	1.0	null
CBX2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040432
t52-hippocampus_male_2w	MoTrPAC Rat Endurance Exercise Training	1.0	1.57946
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.227752
increased vertical activity	IMPC Knockout Mouse Phenotypes	1.0	null
USF2	ENCODE Transcription Factor Targets	1.0	null
NCIH596	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35257
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98126
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4994-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
macular corneal dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.55779
SK-N-FI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22034
t70-white-adipose_female_1w	MoTrPAC Rat Endurance Exercise Training	1.0	1.3233
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.698625
skeletalmuscle	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.960842
MAX	ENCODE Transcription Factor Targets	1.0	null
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.749992
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.78938
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58785
NUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.40397
MYC_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058153
hyperactivity	IMPC Knockout Mouse Phenotypes	1.0	null
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
KDM5A	ENCODE Transcription Factor Targets	1.0	null
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.8814
H3K4me1_CH12.LX_mm9_4	ENCODE Histone Modification Site Profiles	1.0	null
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.696989
ZNF263_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5987-11A-01R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RKO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.93441
H3K27me3_megakaryocyte_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney Chromophobe_KICH_TCGA-KN-8425-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10348
truncated	GeneRIF Biological Term Annotations	1.0	null
venule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.648532
fertilizedegg	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.09466
16651409-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
H2AFZ_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acute myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087465
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46006
SNU213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36393
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.807299
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZE-06A-11R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.250751
WM793	CCLE Cell Line Gene CNV Profiles	-1.0	-2.21614
reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.044654
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21594
heart	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.5376
CAL-85-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01929
Kidney renal papillary cell carcinoma_KIRP_TCGA-UN-AAZ9-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
H3K27me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834534
marrow cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080723
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052964
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58785
RCOR1-19997604-NEURONS-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.935341
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Q-11A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-Y8-A8RY-11A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EZH2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bonemarrow	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.72439
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052116
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-5678-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22263
Kidney Chromophobe_KICH_TCGA-KN-8430-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.04913
H3K4me1_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.0102
cytoplasmic part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040574
POLR2AphosphoS5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
uterine endometrium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.249329
SKNFI	CCLE Cell Line Gene CNV Profiles	1.0	1.3466
leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.082843
NCIH660	CCLE Cell Line Gene CNV Profiles	1.0	2.00335
JM1	CCLE Cell Line Gene CNV Profiles	1.0	3.21688
mammary gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.218186
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41863
STAT3	ENCODE Transcription Factor Targets	1.0	null
lymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.477367
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
HPAFII	CCLE Cell Line Gene CNV Profiles	1.0	1.80177
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.46148
thorax	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
KDM5B_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069197
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.073326
gland	GeneRIF Biological Term Annotations	1.0	null
glandular epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.522405
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45733
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2183
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041169
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.993656
CRX_DN.V1	MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations	-1.0	null
NCIH1792	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37971
Mammary Neoplasms, Animal	CTD Gene-Disease Associations	1.0	2.88009
intracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043158
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21594
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932946
uterine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.620217
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.951145
Hyperplasia	CTD Gene-Disease Associations	1.0	1.14473
HS-SULTAN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03578
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5467-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K27me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58785
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.40778
STAT5A	ChEA Transcription Factor Targets	1.0	null
GATA2-21571218-MEGAKARYOCYTES-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.220378
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ELF1-20517297-JURKAT-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.942725
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963382
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10348
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JT-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
biliary epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.142638
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21594
exocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068918
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
lymphoblastic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.094336
PL-21	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07557
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.77717
IGR37	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69943
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22792
mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.084172
NCI-H226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.875312
abnormal sleep behavior	MGI Mouse Phenotype Associations 2023	1.0	null
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	2.20749
aberrant	GeneRIF Biological Term Annotations	1.0	null
t-lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.308251
PANC0327	CCLE Cell Line Gene CNV Profiles	1.0	1.84187
MAX_NB4_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
t70-white-adipose_consensus	MoTrPAC Rat Endurance Exercise Training	1.0	6.23572
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Uterine Cervical Neoplasms	CTD Gene-Disease Associations	1.0	1.04978
high endothelial venule	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	2.36821
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29333
Infertility, Female	CTD Gene-Disease Associations	1.0	1.24433
Mammary Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	2.88009
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46006
peritoneal cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.185055
acute myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.080409
GATA1	ChEA Transcription Factor Targets	1.0	null
GMS10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3261
EZH2	ENCODE Transcription Factor Targets	1.0	null
HDAC6	ENCODE Transcription Factor Targets	1.0	null
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
cholecalciferol_mus musculus_gpl6246_gse41184	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SNU216	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4223
blastomere	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071353
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.372743
adiposetissue	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.07133
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040388
SNU-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16527
excretory gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
18394172-S4GeneList	GeneSigDB Published Gene Signatures	1.0	null
hematopoietic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.083602
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
alitretinoin_rattus norvegicus_gpl85_mammary gland_gds2385	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
H3K9ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01929
hematopoietic stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076061
H3K27me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
vein	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.333028
NFE2L2-20460467-MEF-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
HUH1	CCLE Cell Line Gene CNV Profiles	1.0	1.43462
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46682
Lung adenocarcinoma_LUAD_TCGA-50-5931-01A-11R-1755-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EP300_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HS 695T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83398
PXR (PXR:RXR)	MotifMap Predicted Transcription Factor Targets	1.0	null
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.342971
RC-K8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54895
vitamin e_mus musculus_gpl1261_gse42813	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SKM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.98516
Kidney Chromophobe_KICH_TCGA-KO-8403-11A-01R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mucous gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.176062
NCIH1355	CCLE Cell Line Gene CNV Profiles	1.0	1.8885
GATA1-21571218-MEGAKARYOCYTES-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16381
thyroid	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.55471
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
vascular endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.4445
SAP30	ENCODE Transcription Factor Targets	1.0	null
digits	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.943558
MEC1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.32802
ZIC2_01_121	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.63113
salivarygland	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.868511
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64213
12941627-table1b	GeneSigDB Published Gene Signatures	1.0	null
monocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.100761
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.914788
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.33424
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5455-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
t70-white-adipose_female_2w	MoTrPAC Rat Endurance Exercise Training	1.0	1.39625
FOS	ENCODE Transcription Factor Targets	1.0	null
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
OE19	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.24687
KG-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.87308
T3M4	CCLE Cell Line Gene CNV Profiles	1.0	1.53879
NCIH2170	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33463
myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071336
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01929
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.945112
various	GeneRIF Biological Term Annotations	1.0	null
trunk	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Differentiated alveolar cell_Mammary gland_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
lymphocytic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.248361
CGTHW1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63567
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
RUNX2_01_361	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.74677
POLR2AphosphoS5_SK-N-MC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-GL-A9DE-11A-11R-A37K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2824-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.868951
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
ZNF263	ENCODE Transcription Factor Targets	1.0	null
myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066706
phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087278
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.377996
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4891-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47696
Lung squamous cell carcinoma_LUSC_TCGA-51-6867-01A-11R-2045-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VMRC-LCD	COSMIC Cell Line Gene CNV Profiles	1.0	2.15316
cSARS Bat SRBD_36Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.1616
H3K27me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876609
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
abnormal retina morphology	MGI Mouse Phenotype Associations 2023	1.0	null
mammary gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81432
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041721
SUZ12	ENCODE Transcription Factor Targets	1.0	null
NCIH1092	CCLE Cell Line Gene CNV Profiles	1.0	2.00817
KMS11	CCLE Cell Line Gene CNV Profiles	1.0	2.53855
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041902
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19524
blast cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075504
mononuclear phagocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.098843
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
bacterial infectious disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04473
RBBP5	ENCODE Transcription Factor Targets	1.0	null
IGR39	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45897
20460173-ImmPortComprehensiveListofImmune-RelatedGenes	GeneSigDB Published Gene Signatures	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	1.13827
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58968
thorax	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054949
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26601
cell surface	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.2708
lymphocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.12055
Kidney renal clear cell carcinoma_KIRC_TCGA-CW-6088-11A-01R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.689634
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040185
lymphoblastoid cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.111856
CBX2	ENCODE Transcription Factor Targets	1.0	null
acute lymphoblastic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.095609
ELF1	ChEA Transcription Factor Targets	1.0	null
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.04678
G22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31565
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09566
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.994119
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
gall bladder	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.176269
18180321-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
ACHN	CCLE Cell Line Gene CNV Profiles	1.0	1.73671
protein-carbohydrate complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.12552
gastrointestinal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.049809
POLR2AphosphoS5_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22034
Lung squamous cell carcinoma_LUSC_TCGA-94-7033-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
REC1	CCLE Cell Line Gene CNV Profiles	1.0	1.80089
gallbladder disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.67312
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19524
gall bladder epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.625061
mammarygland.lact.	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
H3K27me3_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5454-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.42735
DMS79	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73146
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
BGC823	CCLE Cell Line Gene CNV Profiles	1.0	1.43892
CHD1	ENCODE Transcription Factor Targets	1.0	null
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell	Reactome Pathways 2014	1.0	null
lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.267791
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19375
Kidney renal clear cell carcinoma_KIRC_TCGA-B4-5832-01A-11R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HDAC1	ENCODE Transcription Factor Targets	1.0	null
CHK1_KD_GSE54268_666_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075176
t52-hippocampus_male_4w	MoTrPAC Rat Endurance Exercise Training	1.0	1.82105
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CORL105	CCLE Cell Line Gene CNV Profiles	-1.0	-1.87639
acute lymphoblastic leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.269174
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.342006
18394172-S3GeneList	GeneSigDB Published Gene Signatures	1.0	null
lymphoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.106439
sirolimus_homo sapiens_gpl2895_gse16944	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
chorioallantois	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.246442
HUPT3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.01704
golgi apparatus part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.059169
endothelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.719524
KDM5B	ENCODE Transcription Factor Targets	1.0	null
dactinomycin_homo sapiens_gpl7172_gse12459	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K56ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
vascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.608124
U-937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10348
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
jurkat cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.388912
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
CTCF_lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Carcinoma	CTD Gene-Disease Associations	1.0	2.88009
estradiol_mus musculus_gpl4134_gse23241	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
myeloid progenitor cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079962
heart	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.541377
KP2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4817
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9me1_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
blood vessel endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.757432
H3K27me3_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
t70-white-adipose_male_8w	MoTrPAC Rat Endurance Exercise Training	1.0	1.98242
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6938-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.04928
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
Inflammation	CTD Gene-Disease Associations	1.0	1.0561
lymphnode	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.37006
KG1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.58988
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29333
breast	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043086
hyperactivity	MGI Mouse Phenotype Associations 2023	1.0	null
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-DV-5567-01A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Alveolar progenitor cell_Mammary gland_Mouse	CellMarker Gene-Cell Type Associations	1.0	null
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051286
Lung squamous cell carcinoma_LUSC_TCGA-94-7943-01A-11R-2187-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
15474998-tableS1c	GeneSigDB Published Gene Signatures	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
USF2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RCOR1	ChEA Transcription Factor Targets	1.0	null
breast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056422
GATA2	ChEA Transcription Factor Targets	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.981479
JVM3	CCLE Cell Line Gene CNV Profiles	1.0	1.45537
cholera	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.394118
increased vertical activity	MGI Mouse Phenotype Associations 2023	1.0	null
H3K4me1_CH12.LX_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
morula	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.344079
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.692493
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.227752
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5705-11A-01R-1541-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
U343	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33693
snoutepidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.29679
15793299-TableC	GeneSigDB Published Gene Signatures	1.0	null
OE19	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.045287
mammary	GeneRIF Biological Term Annotations	1.0	null
mesentery	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.765711
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
MDA-MB-435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.11843
SKLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.59761
peritoneum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.43146
leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.090361
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
NRF2-20460467-MEF-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
mesenteric lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.868951
KMS34	CCLE Cell Line Gene CNV Profiles	1.0	1.7254
blood vessel	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.588832
H3K27me3_megakaryocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	1.0	1.62729
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.90883
endothelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.24565
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.74354
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
disease by infectious agent	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040901
captopril_mus musculus_gpl1261_gds3683	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03233
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
splicing	GeneRIF Biological Term Annotations	1.0	null
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08664
adult stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.078996
MYC	ENCODE Transcription Factor Targets	1.0	null
NANOG	ChEA Transcription Factor Targets	1.0	null
Adaptive Immune System	Reactome Pathways 2014	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
zygote	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069182
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	1.45853
H3K27me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A704	CCLE Cell Line Gene CNV Profiles	1.0	1.48545
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5463-11A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-XJ-A83F-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cell periphery	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
TYK-NU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01798
A-Netherlands-602-2009(H1N1)_3Hour_None_GSE40844	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.68714
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.831214
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal retina morphology	IMPC Knockout Mouse Phenotypes	1.0	null
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53752
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37032
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.787716
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03578
bone marrow stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.327896
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04221
NFE2L2	ChEA Transcription Factor Targets	1.0	null
Skin Cutaneous Melanoma_SKCM_TCGA-FR-A728-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cholelithiasis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.879014
eye and adnexa disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.053812
MKN7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60194
cardiovascular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.536229
H3K27me3_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864718
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932946
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.237908
H3K27me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.690859
mucosa	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.072152
encodes	GeneRIF Biological Term Annotations	1.0	null
pou5f1_20526341_human_embryonic_stem_cells_hesc_lof_human_gpl6947_gse21135	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.010777
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37458
Brain Lower Grade Glioma_LGG_TCGA-FG-A6J1-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7PW-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
abdomen	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.256234
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.08457
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null