association	dataset	threshold value	standardized value
BRD-K59317601_INK-128_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
REV3L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00757639
BRD-K94012289_OSI-027_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Golgi organization	GO Biological Process Annotations 2025	1.0	null
GTEX-QXCU-0126-SM-2TC5Q	GTEx Tissue Sample Gene Expression Profiles	1.0	0.939256
BRD-K42918627_GSK-2126458_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
POLR2E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32761
BRD-K46056750_AZD-7762_HA1E_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9806
APOBR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00465683
thyroid_5b	HPA Tissue Sample Gene Expression Profiles	1.0	0.873079
SELPLG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00601257
GTEX-OXRP-2326-SM-2S1NL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
SMAGP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78798
OTC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00729623
H3C1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44888
BRD-K15928912	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22506
BRD-A45498368_WYE-125132_LNCAP_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
COL4A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00763293
HOXA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21519
BRD-K00377328	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15058
GTEX-SJXC-0005-SM-2XCE7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K10882151_BO2 (inhibits RAD51)_DV90_6.0_h_40.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PAK6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.13253
EMP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87587
GTEX-QLQW-1426-SM-2S1QU	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04196
BRD-K30677119_PP-30_HCT116_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RPRM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28376
CBLL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43928
BRD-K01311880	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4263
BRD-K19776718	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.74594
NUP58	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07763
GTEX-XUW1-1126-SM-4BONZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.26745
CORO1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38689
NIBAN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.11975
GTEX-X4XY-0826-SM-4E3JM	GTEx Tissue Sample Gene Expression Profiles	1.0	1.28951
ABCG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39236
GTEX-P4QT-0126-SM-2I3FL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.30052
GTEX-QV31-0326-SM-447BM	GTEx Tissue Sample Gene Expression Profiles	1.0	0.960386
TCTA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00448433
IL18	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00647023
TEF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9995
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04304
GSE113734_3_v_2_qprt_human	RummaGEO Gene Perturbation Signatures	1.0	null
MAX	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0114774
AIF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9415
NT5DC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00602501
BRD-A75769826_SDM25N hydrochloride_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE217776,GSE217829_1_v_6_sgf29_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_C91-PL_LPS_vs_DC_Jurkat-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
NSA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01197
TGFB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00531298
hMPV_24Hour_18234263_GSE8961	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.1884
CES1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0116388
BRD-K68401280	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.53094
KRTCAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36368
INTS13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.20359
ERBB4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00647887
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911733
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.032
BRD-K64890080_BI-2536_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.0482
BRD-K74402642_Chemistry 2804_SW948_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hel	HPA Cell Line Gene Expression Profiles	1.0	1.23837
FAM117A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.42889
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2592
BRD-K12836153	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19749
BRD-K74879991	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18005
HOXB4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.7863
DUOX2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00673636
CDH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00547371
BRD-K42123500	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.19089
AXIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.39929
Lung	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.83831
WBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35975
GTEX-SNMC-0826-SM-4DM66	GTEx Tissue Sample Gene Expression Profiles	1.0	0.998031
LEPROTL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99473
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7457
BRD-K63606607_bufalin_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K18599462	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.02667
BRD-K49671696_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K13094524_PFI-1_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RSPO3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00689915
BRD-K49865102_PD-0325901_A375_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE210662_3_v_1_znf165_human	RummaGEO Gene Perturbation Signatures	-1.0	null
RTL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00714097
BRD-K49328571_dasatinib_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K37687095_AZD-8330_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CCDC71	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0062141
BRD-K97377031	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22124
BRD-K79299080	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.12271
GTEX-Q2AH-0008-SM-48U2J	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07744
BRD-K19575490	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11441
BRD-A45498368_WYE-125132_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K42918627_GSK-2126458_PC3_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RAB25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65012
BRD-K90956468	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11386
BRD-K64890080_BI-2536_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K00313977_-666_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
APLNR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00535211
RAPSN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00655263
BRD-A18328003_GDC-0980_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K74402642_Chemistry 2804_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GSE175787_8_v_6_rhoc_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-WHSE-0006-SM-3NMBW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.852772
CIC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65277
NR1H4::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7811
TLCD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41366
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.09771
CLP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.00458
RELT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0103109
GTEX-XOTO-2126-SM-4B64U	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.35748
DBR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46409
FHL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26441
BRD-K64890080_BI-2536_MDAMB231_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K99755021	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.77374
GTEX-XUW1-1526-SM-4BOOY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.968894
SRRT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00858941
CXCL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5537
TSC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00919183
BRD-K65813214	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04212
GTEX-U4B1-1526-SM-4DXSL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.58191
CCL20	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0072405
BRD-A13122391_16-HYDROXYTRIPTOLIDE_HCC515_24.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K29571884	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05905
SH3BP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50494
AHR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00707585
501A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.827408
BRD-K79090631_CGP-60474_HS578T_3_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K57080016_selumetinib_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GCK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0107787
BRD-K10232513	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26344
ORAI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14238
GSE120216_3_v_0_cbfb_human	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K40175214_torin-1_HA1E_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
golgi apparatus	GO Cellular Component Annotations 2015	1.0	null
BRD-K49456190_PRIMA-1 MET_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NRP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.03155
GSE138939_2_v_3_enzalutamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-NL3H-0011-R11A-SM-2I3E6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K30361950	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05293
BRD-K64026092	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13795
DCUN1D2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76639
BRD-K86978618	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37658
NSMCE3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33054
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2002
central nervous system disease	GWASdb SNP-Disease Associations	1.0	0.133101
QSOX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2706
GSE155031_5_v_2_dextran_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GTEX-S341-0006-SM-3NM8D	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BATF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10672
BRD-A45498368_WYE-125132_A549_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0418
FUBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65615
BRD-A45498368_WYE-125132_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-W5WG-1926-SM-4KKZK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.21364
BRD-K44100512_KIN001-043_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
VDAC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0111874
BRD-K65824451	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.85138
GTEX-WHSE-0926-SM-3NMBS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
RGS13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00787315
XPOT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00429628
BRD-A27887842_PREDNISOLONE_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-P44H-0526-SM-2XCF1	GTEx Tissue Sample Gene Expression Profiles	1.0	0.845388
GTEX-SSA3-0005-SM-32QOT	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.19682
EKVX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53796
TCF21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.84957
TCF12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00697673
ACSF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.096
BRD-K22010301_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GSTZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22583
TMEM185B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52168
RARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7878
BRD-A12409803_-666_VCAP_6.0_h_40.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K49075727_nintedanib_SKBR3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-NPJ8-0011-R11A-SM-2YUMS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3536
TTC21B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30677
GTEX-R53T-0826-SM-48FCP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.22106
HDAC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0065014
GTEX-OIZI-0726-SM-2XCEI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19653
GNG4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00799886
BRD-K37764012_PF-3758309_HT29_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TFB1M	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98331
ZNF441	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54866
SPINK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00466979
BRD-K15373812	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.61806
HCT116	BioGPS Cell Line Gene Expression Profiles	-1.0	-2.02526
BRD-K68174511_torin-2_HCC515_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SETBP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00756427
PDE8A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00652108
BRD-K41895714_AS-605240_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-PX3G-0008-SM-48U2L	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1904
BRD-K37764012_PF-3758309_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K61726189	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06003
BRD-K49865102_PD-0325901_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TWNK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40519
BRD-K21680192_mitoxantrone_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K37687095_AZD-8330_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-PW2O-1426-SM-48TCD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.28999
ITGAL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00519441
BRD-K91349888_arg-a1-22 BRD-K91349888_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ATF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00442947
BRD-K35520972	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.67067
CXCL13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00471884
GTEX-RU72-1426-SM-46MUF	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.27137
XCR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0057799
SNAPC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16118
GTEX-O5YT-0007-SM-32PK7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.863286
SUCLG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00531652
BRD-K79561909	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20833
C6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00815001
SHISA5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00592346
ROBO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00668889
ADAMTS5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00388138
GTEX-P4PP-0426-SM-3NM9H	GTEx Tissue Sample Gene Expression Profiles	1.0	1.27424
BRD-K45062933	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34149
GTEX-XQ3S-2726-SM-4BOP2	GTEx Tissue Sample Gene Expression Profiles	1.0	2.48858
GSE178340_1_v_9_carfilzomib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SALL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8711
C14orf93	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86564
ADAP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00711572
BRD-K50168500_canertinib_BT20_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-WFON-2026-SM-4LVMW	GTEx Tissue Sample Gene Expression Profiles	1.0	1.67952
USP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54086
ZNF281	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.11293
ATP2A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0105909
BRD-K69516039_MLS-0435541.0001_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K67146164	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20195
CCDC8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26779
MSL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51117
ASH-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-RU72-1126-SM-2TF6H	GTEx Tissue Sample Gene Expression Profiles	1.0	0.853869
BRD-K71216961	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21657
BRD-K93754473_-666_RKO_6.0_h_28.3899993896_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-XV7Q-1726-SM-4BRUU	GTEx Tissue Sample Gene Expression Profiles	1.0	1.21281
BRD-K56343971_vemurafenib_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K79090631_CGP-60474_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K48012250	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1572
GTEX-QMR6-1926-SM-32PL9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01015
BRD-K14719962	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54319
KIR3DL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00488644
karpas707	HPA Cell Line Gene Expression Profiles	-1.0	-1.28527
GTEX-XUZC-2026-SM-4BRW9	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.86627
BRD-K80381603	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46359
BRD-K50140147_NVP-TAE684_MDAMB231_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K15592317_CP466722_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-RM2N-1926-SM-48FCU	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.921826
BRD-A46747628_Ouabain_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NOD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00584784
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919694
AOX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00423485
BRD-K49865102_PD-0325901_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K89366873	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47336
BRD-A90289676	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.7173
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3088
estradiol_homo sapiens_gpl570_gds3283	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-TML8-0005-SM-32QPA	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
SRPRB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51216
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09889
KYSE-220	COSMIC Cell Line Gene Mutation Profiles	1.0	null
STX4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00491134
BRD-K58853583_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CEP170B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04693
BRD-K88510285_B675700.cdx_U937_6.0_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.09771
BRD-K49328571_dasatinib_HA1E_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K08241590	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14113
BACE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45814
GSE201309_4_v_7_matrine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-A58955223_L-sulforophane_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TYRO3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00482879
BRD-K18368161	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.18553
GSE214685_0_v_1_nsun2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ASB8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63199
CD80	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00605127
chr15_30606427_C_A_b38	GTEx eQTL 2025	1.0	3.57627
MX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10214
BRD-K99252563_QL-XII-47_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BMP2K	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00558479
BRD-K72636697_QL-X-138_LNCAP_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TARS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06046
BRD-K70940767	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20288
BRD-K77775127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21505
BRD-K27616520	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27543
sirolimus_homo sapiens_gpl96_gds2494	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-O5YT-2126-SM-3MJGD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.27653
BRD-K64800655_PHA-793887_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9868
SHANK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40561
NCI-H1770	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.4792
BRD-K03957217	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.15119
GSE180147_0_v_1_itga5_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ITGA2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00508952
ABCF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19117
TSR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62746
GTEX-W5WG-0008-SM-4KL25	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.3142
BRD-K05104363_PD-184352_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCA-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.86587
LIVF001-023	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.46743
BRD-K61033289_15-Deoxy-?12,14-prostaglandin J2_RMUGS_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PLCG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00565706
PDK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33929
JDP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18501
ULK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67725
GPN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11185
GTEX-RN64-2326-SM-48FDW	GTEx Tissue Sample Gene Expression Profiles	1.0	1.16163
BRD-K88573743_A443654_HA1E_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K41895714_AS-605240_A375_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GMCL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18426
BRD-K14914284_NCGC00187898-02_A375_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-REY6-0126-SM-48FDT	GTEx Tissue Sample Gene Expression Profiles	1.0	2.18711
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.0662
BRD-A10188456_DEXAMETHASONE_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K05104363_PD-184352_A375_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SLC7A11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00684488
BRD-K78431006_HY-50878_NPC_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
A204	BioGPS Cell Line Gene Expression Profiles	1.0	1.30431
BRD-A75931230_7706-0139_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K64890080_BI-2536_A375_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EBPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01917
PDE1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00763243
ATXN2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00936284
SDSL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0069321
RBBP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.21282
BRD-U60236422_WH-4-025_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZNF775	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.84153
FEZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.3283
496100545_HIP_possible Alzheimer's disease_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.30826
GTEX-TKQ1-0926-SM-4DXU2	GTEx Tissue Sample Gene Expression Profiles	1.0	1.65439
ZNF280C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16951
BRDT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05565
JRK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30539
GTEX-OIZF-0006-SM-2I5GQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06548
BRD-A19037878_trichostatin A_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
OVISE	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-X88G-0126-SM-47JZ3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.90021
BRD-K65913831	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61831
HSC-4	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-U412-0006-SM-3DB8J	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
TET2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0103147
HUO9	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ARPC5L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.00981
BRD-A45498368_WYE-125132_LNCAP_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Dextrocardia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.539
BRD-K12502280_TG-101348_HA1E_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RCSD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00640331
TestisLeydigCell	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.07396
PELO	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00614326
ZNF443	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67201
BRD-K09106444	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.90115
C3A	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CIZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63529
BRD-K07667918_linsitinib_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SMKR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00625965
BARX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.9606
BRD-K65135171	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03944
STK17A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00527572
GTEX-T2YK-0005-SM-32QOV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
Townes-Brocks syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.631
CYB5R2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42631
DLG3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0076707
RNASE6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47218
GTEX-WL46-0126-SM-3TW8I	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00068
BRD-K16891407	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00803
BRD-K20696416_NVP-AEW541_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CDC42BPG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00728001
SLC22A23	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00808903
BRD-K05802716	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13857
BRD-K68065987_MK-2206_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TMEM120A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00659122
BRD-K68065987_MK-2206_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SIU8-0626-SM-2XCDN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.49746
TMEM41A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99052
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.85652
membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
HTC-C3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.7236
LU-135	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GCM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.61086
TWIST1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00635502
KHM-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900939
MINDY1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00681117
RGL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74888
BRD-K72125659	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44738
BRD-K37285826	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.66466
TestisSeminiferousTubule	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.18996
GTEX-R55F-0011-R6A-SM-2TF4L	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.28426
LSR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2519
CREB3L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9867
GTEX-T6MN-0626-SM-32PM9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08711
BRD-K22874335	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06959
SOCS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41364
BRD-K00337317_HY-11006_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MRPS23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8472
BRD-U64521890_XMD16-144_HS578T_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K46056750_AZD-7762_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MRPL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40652
SPATS2L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00834848
GSE228106_3_v_1_paclitaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSTA5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00517193
ZNF317	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5879
CDKL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00474658
GSE210101,GSE210114_6_v_9_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
OVTOKO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
RASGRP4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00556643
INTS14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75219
HIVEP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00648506
GSE148200_1_v_2_gemcitabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Golgi cisterna	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
BRD-K21680192_mitoxantrone_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K13817284	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02851
NR1H2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8
GTEX-RWSA-2426-SM-47JXR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.77857
GTEX-XMK1-0926-SM-4B66X	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01322
SLC8A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.54712
CARHSP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.15493
UNCX	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0108611
CA5B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0068448
ARPC1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0102764
BRD-A28422330_4-[5-(4-methoxyphenyl)-3-phenyl-4,5-dihydro-1H-pyrazol-1-yl]benzenesulfonamide_A375_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CSNK1G2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00564831
BRD-A68949340	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09178
BRD-K00853706	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37749
GSE73376_1_v_0_dgcr8_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K20526256_HG-14-10-04_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LDHA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0033641
TTLL13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4732
OFD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00562953
GTEX-XQ8I-0006-SM-4BOQ5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K99545815_PF-562271_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9207
BRD-K74148702_curcumin_HCT116_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K56489029_NCGC00238551-02_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GRB10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0038763
BRD-K76487707	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01156
GTEX-UJMC-1826-SM-3GADT	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.22442
BRD-K65291993	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07438
GTEX-QEG5-0426-SM-2I5GJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06738
chr15_30679628_A_G_b38	GTEx eQTL 2025	1.0	1.06877
BRD-K51575138_TPCA-1_HCT116_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PADI4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00689137
BRD-K03618428_PP-110_HA1E_24.0_h_22.2_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
USP13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52277
nervous system disease	GWASdb SNP-Disease Associations	1.0	0.067279
CIBAR2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0051815
GSE221327_4_v_0_clpp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SYT11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00594657
SLC26A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00471995
FXYD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98208
ATAD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00502711
BRD-K06418332	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18839
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
GTEX-S7SF-1626-SM-3K2AY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2139
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.269
chr15_30653920_A_T_b38	GTEx eQTL 2025	1.0	5.02551
SOX4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00537456
BRD-K47783463	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.53109
ZNF407	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92159
GTEX-RN64-0626-SM-2TC5V	GTEx Tissue Sample Gene Expression Profiles	1.0	1.10108
GTEX-POYW-0826-SM-2XCEM	GTEx Tissue Sample Gene Expression Profiles	1.0	1.41444
BRD-K00910650_NCGC00242335-01_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54181
GTEX-NPJ7-0011-R4a-SM-2I3GJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.13427
BRD-K12502280_TG101348_WSUDLCL2_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TAB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00461567
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7011
pcgf2_17452456_medulloblastoma_lof_human_gpl570_gds2724	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.32947
BRD-K64329997	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40523
TCF7L2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00372297
GTEX-XXEK-1326-SM-4BRV1	GTEx Tissue Sample Gene Expression Profiles	1.0	0.916812
BRD-K72636697_QL-X-138_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FHAD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00534828
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Up_bins-Up_bins_gaining_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K83972459_JWE-035_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K12184916_NVP-BEZ235_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
COLO-800	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-W5X1-0426-SM-3GILB	GTEx Tissue Sample Gene Expression Profiles	1.0	1.33076
TEX101	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00754917
HDAC10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03569
GSE158834_10_v_9_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
BRD-K99252563_QL-XII-47_HS578T_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCF4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00586487
OTOL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27617
MPP-89	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K54247106	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12095
BRD-K45663146	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05451
MFSD12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66015
GTEX-P4QS-1726-SM-3NB1V	GTEx Tissue Sample Gene Expression Profiles	1.0	0.868163
BRD-K17821077	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51523
BRD-K54997624_BYL719_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HDAC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00587388
GTEX-U3ZH-0005-SM-3DB72	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.03885
GTEX-WFJO-0005-SM-3GIKY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04968
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3089
BRD-K64449549	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01313
GTEX-RUSQ-2126-SM-47JXK	GTEx Tissue Sample Gene Expression Profiles	1.0	2.41679
BRD-K53417444_OTSSP167_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6505
H2AC19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53954
BRD-K50479239	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.03327
BRD-U22633929_XMD11-85H_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K05804044_AZ-628_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K69932463_AZD-8055_HA1E_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K06492501	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.78271
BRD-K64058329_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33344
SCN3A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00744875
GABRE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02719
SLC25A17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15765
HOXA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1112
POU6F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4449
GTEX-OOBJ-0008-SM-3NB26	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-A25736793_everolimus_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K65005311	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.8107
RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	74.257
SIN3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47431
BRD-K96968070	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.56216
ACVR1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00560502
GTEX-PWOO-0926-SM-2I3EC	GTEx Tissue Sample Gene Expression Profiles	1.0	0.865391
GTEX-OOBK-2126-SM-3LK5T	GTEx Tissue Sample Gene Expression Profiles	1.0	2.69496
PLP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1474
SLAMF9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00619581
B4GALT6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74072
GTEX-XLM4-0005-SM-4AT4P	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.935573
CRIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51607
GSE183101_0_v_1_hvcn1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K40175214_torin-1_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HOXB7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.7382
BRD-A67788537_Salermide_SNGM_6.0_h_120.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K50140147_NVP-TAE684_A549_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IFIH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0056844
GTEX-T2IS-2926-SM-32QPO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1307
BRD-K30173809	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24012
BRD-K03352392	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28067
BRD-K31230200	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12244
GTEX-QDVN-0626-SM-2I3FP	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01361
RNASEH2C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0110176
BRD-A11154023	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21525
BRD-K80602847	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.54971
BRD-A52193669_2816_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TOP1MT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00655316
GTEX-U3ZH-0626-SM-4DXT3	GTEx Tissue Sample Gene Expression Profiles	1.0	0.920208
DYRK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00700317
MNX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6731
BRD-K06436323_3-ethyl-6-{4-[3-(trifluoromethyl)phenyl]piperazin-1-yl}pyrimidine-2,4(1H,3H)-dione_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SEMA4G	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00600465
TNFSF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.25562
SLC20A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23619
GSE158834_10_v_8_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-V1D1-0326-SM-4JBIY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.883713
GSE117212,GSE117214_0_v_1_zbtb1_human	RummaGEO Gene Perturbation Signatures	1.0	null
AKR1B10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00621691
BRD-K53401077	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.71
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.279
SIAH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6092
GPR18	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00722156
BRD-K50387473_XMD-892_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TSEN34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32855
GTEX-PLZ5-0426-SM-3P612	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2103
VAMP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82427
Double outlet right ventricle	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.27
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991998
GPRC5A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00440372
GTEX-QDVJ-0226-SM-2I5FV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.24371
GTEX-XOTO-0006-SM-4B64T	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GTEX-QESD-1626-SM-2S1RB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.22811
BRD-K12184916_NVP-BEZ235_A549_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LRRC8A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00954094
BRD-K04834648	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34176
ZNF121	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.55294
PASK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.22601
MYCN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00712732
KCTD12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00581037
BRD-K08966355	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03311
REEP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05568
GSE223893_4_v_9_setd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
CCDC121	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00718599
GTEX-Q2AH-0726-SM-2I3EA	GTEx Tissue Sample Gene Expression Profiles	1.0	0.868872
BRD-K14570970	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.66451
SMPD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69444
CAMK2D	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00565599
BRD-K74402642_Chemistry 2804_THP1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
LPCAT3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42806
GRM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00755453
PAOX	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00563611
BRD-K87530935	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32127
496100671_HIP_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.50285
ERN2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00537495
GTEX-SN8G-1526-SM-4DM79	GTEx Tissue Sample Gene Expression Profiles	1.0	1.22561
SERPINE2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41446
TRAF3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00620817
hepg2	HPA Cell Line Gene Expression Profiles	-1.0	-1.28527
BRD-K12502280_TG-101348_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
bone marrow	HPA Tissue Gene Expression Profiles	1.0	1.10473
COBLL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0116347
FGFR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00839065
TBC1D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49683
CYP19A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00587164
CAMSAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49378
RTEL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0100528
TYK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.006086
HRAS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00554526
GTEX-X4XY-1726-SM-46MVO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.0669
KMT5B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.013071
GTEX-PLZ5-1526-SM-3P5ZX	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0821
SH2B2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.17954
chr15_30368995_G_A_b38	GTEx eQTL 2025	1.0	1.03177
GTEX-S32W-0426-SM-4AD6H	GTEx Tissue Sample Gene Expression Profiles	1.0	1.26543
GTEX-OXRP-0006-SM-2I3FN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K49865102_PD-0325901_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PXK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00737798
GTEX-TSE9-0005-SM-4DXUF	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.942528
GM1600	BioGPS Cell Line Gene Expression Profiles	1.0	1.22644
KLK13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69253
EBF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00442479
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76455
GTEX-X585-0011-R10A-SM-46MUY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.85349
SHROOM3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00901058
GTEX-XPT6-1626-SM-4B655	GTEx Tissue Sample Gene Expression Profiles	1.0	1.45639
BRD-K49865102_PD-0325901_HT29_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FAM98B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63766
GTEX-QEG4-0008-SM-48TYZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08058
BRD-K72636697_QL-X-138_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
AMD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.34579
GTEX-S341-1726-SM-3K2AK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	136.875
PCNX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74889
duodenum	HPA Tissue Gene Expression Profiles	-1.0	-1.73169
STK38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97623
GTEX-XV7Q-0326-SM-4BRVM	GTEx Tissue Sample Gene Expression Profiles	1.0	0.989093
MTF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4203
HPS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13422
GSE77108_8_v_1_saha_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NDUFA9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00671189
LDHC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00530391
MAPK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74249
GTEX-OHPM-2626-SM-33HC5	GTEx Tissue Sample Gene Expression Profiles	1.0	0.855732
BRD-K30682979	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.70876
EPHA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00446597
GSE207611,GSE207612_3_v_2_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
BRD-K60760423	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09
BRD-K75644678_-666_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-U64521890_XMD16-144_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-OOBK-0005-SM-2YUMG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.830576
496100508_PCx_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.2331
QKI	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28797
TIMP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00866412
BRD-U60236422_WH-4-025_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SPEF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80881
SIRT5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00690109
GSE221327_5_v_0_clpp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC11772884-41421_2024_747_MOESM6_ESM.xlsx-7_DEGs_USF2-KO_vs_control-Gene_Symbol_USF2	Rummagene Transcription Factor Associations 2026	1.0	null
POLR1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00860921
GTEX-QDVJ-0008-SM-48U2E	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.35926
SLC22A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00649135
BRD-K16331797	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.32461
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5755
LGR4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0062264
CCDC87	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6947
SLC1A7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00510673
GTEX-T5JW-1826-SM-3GAE1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2174
BRD-K64425085	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02931
GTEX-X4XY-0011-R8A-SM-46MVC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
TRAT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00876639
GSE152441,GSE152442_7_v_4_folic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
496100417_HIP_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.33713
MLLT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.93819
ODF2L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15979
ZNF589	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51569
STAM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00872437
PRKDC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00843658
GTEX-XLM4-1526-SM-4AT6D	GTEx Tissue Sample Gene Expression Profiles	1.0	1.7961
GTEX-WH7G-0626-SM-4LVMO	GTEx Tissue Sample Gene Expression Profiles	1.0	1.34276
BRD-K49865102_PD-0325901_HEPG2_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZNF430	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50475
IDNK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00629705
BRD-K42918627_GSK-2126458_HA1E_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-XPT6-0006-SM-4B66Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.940077
estradiol_homo sapiens_gpl570_gse16683	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
TSPAN13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00661492
BRD-K74514084_pazopanib_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-OXRL-0008-SM-3NB29	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.41802
TINF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.007173
GSE152441,GSE152442_6_v_3_folic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
Huntington's Disease_Blood_GSE1751	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.5982
GTEX-XUW1-0626-SM-4BOP4	GTEx Tissue Sample Gene Expression Profiles	1.0	1.40008
TSHZ3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83656
BRD-A18328003_GDC-0980_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MEX3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.29703
BRD-K25737009_-666_PC3_24.0_h_40.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CA12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00509752
Tricuspid valve disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.031
intracellular part	GO Cellular Component Annotations 2015	1.0	null
PFKL_OE_GDS3353_76_human_B cells in blood	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
BRD-K82112239	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01249
BRD-K12184916_NVP-BEZ235_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SN8G-0001-SM-3NM8L	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.926518
PMC9424213-41467_2022_32537_MOESM5_ESM.xlsx-HeLa_IER3-AS1sh_DEGs-DEGs_in_HeLa_IER3-AS1sh_KD_cells_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-P4QS-2126-SM-3NMCF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.67678
KAT7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0084771
MED16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89232
WDR54	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4481
HRH2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00738934
BRD-K40175214_torin-1_A549_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A59449038	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.18025
BRD-K67868012_PI-103_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K24877937	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29044
GTEX-REY6-0526-SM-2TF5M	GTEx Tissue Sample Gene Expression Profiles	1.0	1.10315
ZNF71	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.00824
DRAM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63368
SMIM3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00712311
GTEX-S7SE-0726-SM-2XCD7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.866925
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.846078
SLC25A15	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00865231
GSE195663_7_v_3_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
BRD-K52911425_GDC-0941_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EFHD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.62874
BRD-K21771449	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.71807
BRD-K88573743_A443654_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K69840642_HDAC6 inhibitor ISOX_SNGM_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TBXT	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4649
FSHR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00628347
IMPACT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91616
GTEX-OXRL-0005-SM-3LK6A	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.952203
WNK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00430031
HS578T	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.04731
PCNX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41109
SIHA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PLSCR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00611451
CCRF-CEM	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-U8T8-1126-SM-4DXUE	GTEx Tissue Sample Gene Expression Profiles	1.0	2.07927
UGT8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25468
BRD-K24496482_SB590885_HS578T_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K63997411	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.32239
skeletalmuscle_e	HPA Tissue Sample Gene Expression Profiles	-1.0	-2.67843
hydrocortisone_homo sapiens_keloid scar_gds3071	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-X5EB-0006-SM-46MV5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.31661
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.85652
GTEX-OXRO-0006-SM-2I5EM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
MRGPRX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00541424
BTBD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80087
BRD-K92985620	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37796
BRD-K06619604	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.15608
TNFRSF11A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00818455
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3573
GTEX-QEL4-0426-SM-3GACZ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.993864
REG4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0048018
BRD-K81592842	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.23157
GTEX-XPVG-0006-SM-4B65Z	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.3694
PSG5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00866011
GTEX-V955-0926-SM-4JBJ8	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14883
PHPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79858
GTEX-X4EP-0005-SM-3P5ZE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.20469
RHPN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37257
SLC12A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00643272
TNNI3K	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00550205
ARHGEF15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91226
BRD-K49328571_dasatinib_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
AXIN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00426923
GTEX-XQ8I-0726-SM-4BOPU	GTEx Tissue Sample Gene Expression Profiles	1.0	1.11047
FGD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.80797
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.85652
GTEX-S341-1826-SM-3K2AB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.849343
NCK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00495286
RAVER1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00640031
EVX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.5677
ING4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00693821
BRD-A15079084_phorbol-12-myristate-13-acetate (PMA)_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
imatinib_homo sapiens_gpl96_gds3044	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RNF169	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44182
BRD-A58767537_afatinib_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
chr15_30766490_C_T_b38	GTEx eQTL 2025	1.0	1.38244
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-0.829679
ES5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K49865102_PD-0325901_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TIPIN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45584
BRD-K02708799_GSK-1059615_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K86797399_pracinostat_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K18887540	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14205
BRD-K50140147_NVP-TAE684_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-X4EO-0126-SM-3P5YN	GTEx Tissue Sample Gene Expression Profiles	1.0	0.847711
BRD-K98548675_Parthenolide_AGS_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-NL3H-0011-R3a-SM-2I3GL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.19411
BRD-K02691653	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26937
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4737
GTEX-XMK1-0005-SM-4B665	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.31613
EHD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21695
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.5616
GTEX-R55C-1926-SM-2TF4K	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00856
GTEX-PWN1-0626-SM-48TDT	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06432
S100A6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.74397
CKMT1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00464617
BRD-A28105619_curcubitacin I_PL21_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DPY30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.28789
BRD-K17293545	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14296
BRD-K03063480_PF-477736_HCC515_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ADCY7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00553242
RCC-AB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-XYKS-0002-SM-4BRWN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.28376
GTEX-SNMC-1026-SM-4DM7K	GTEx Tissue Sample Gene Expression Profiles	1.0	1.81281
PAQR8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03542
BRD-A18825024	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.4298
BRD-K46056750_AZD-7762_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K92317137_-666_THP1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A47513740_calyculin A_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CCNJL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52566
GFM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06448
GTEX-WFJO-0226-SM-3GIKW	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14513
BRD-K71742655	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.33306
GTEX-WRHU-0626-SM-3MJFI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0896
paclitaxel_homo sapiens_gpl570_gse19136	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CAMSAP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00461697
PCK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00742763
CAPAN-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22267
testis_4a	HPA Tissue Sample Gene Expression Profiles	1.0	1.12898
BRD-K46056750_AZD-7762_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K12884811	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.40167
BRD-A18328003_GDC-0980_A549_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HNRNPAB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.45198
HLA-DRB5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00759893
GTEX-VJYA-1426-SM-4KL1Y	GTEx Tissue Sample Gene Expression Profiles	1.0	1.85471
BRD-K75985122	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.35066
GSE261563_7_v_1_atrx_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K42918627_GSK-2126458_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K64890080_BI-2536_MDAMB231_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UQCRQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.78244
GTEX-PWOO-2326-SM-2S1PQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K29850806	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.5059
BRD-A79465854_auranofin_HCC15_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K60759770	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20674
NR2E1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91967
BRD-K42918627_GSK-2126458_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K68007270_-666_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-WWYW-0011-R11A-SM-3NB38	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.40371
IFNGR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00577291
PRMT6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00879362
SLC19A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00545863
PMC7029036-41598_2020_59469_MOESM2_ESM.xlsx-NR4A1_vs_GFP_adj_pval_0_05-Gene_NR4A1	Rummagene Transcription Factor Associations 2026	1.0	null
EIF3L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12489
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21991
Kidney	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.03657
TAF6L	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00619892
FDXACB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14479
TEK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12688
BRD-K76147162	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.26501
NDUFB10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00565124
ACADM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09221
HIF3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09506
GTEX-RWS6-0926-SM-47JXE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
MRPS26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98974
BRD-K12343256_trametinib_HEPG2_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K08799216_pelitinib_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-R53T-2026-SM-3GIJF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.1551
PRF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0112008
DDX43	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89325
BRD-K05979026_NCGC00241726-01_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
cis-Golgi network	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
BRD-K21588993	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14253
USP27X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58869
BRD-A85860691_chaetocin_PC3_24.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FTSJ3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14468
NR0B1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00675131
TESPA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00733567
GSE229973_3_v_0_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CYP2E1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00634214
MRAS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20163
BRD-K29395450_PIK-93_HS578T_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE140937,GSE140938_0_v_2_slfn11_human	RummaGEO Gene Perturbation Signatures	1.0	null
TNRC18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84361
GTEX-T8EM-0006-SM-3DB71	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.17132
GTEX-OIZH-1626-SM-2HMKI	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.25463
GTEX-Q2AH-1526-SM-48TZG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.7508
SHMT2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00579053
RIOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.49196
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.691
GTEX-UTHO-0011-R3A-SM-3GIK8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.28655
Visceral heterotaxy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.162
PSME3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49898
MAF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89601
USP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0085016
GTEX-S7SE-0326-SM-4AT5Q	GTEx Tissue Sample Gene Expression Profiles	1.0	1.72046
IL33	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0100498
ARHGEF10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05506
ROBO3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00672427
GTEX-UTHO-1026-SM-3GAF7	GTEx Tissue Sample Gene Expression Profiles	1.0	1.205
PIK3IP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67045
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7019
GTEX-WCDI-0005-SM-3NB2M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K33680967_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K41895714_AS605240_LOVO_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K40175214_torin-1_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EML4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3767
BRD-K05804044_AZ-628_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SUCS-0226-SM-32PLQ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.48195
MSL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07834
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3651
GDF9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6957
BLM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00750099
RDH11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25654
Golgi cisterna membrane	GO Cellular Component Annotations 2023	1.0	null
PON1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00671054
GSE122509,GSE122513_1_v_0_ibrutinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
MIIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34235
FGL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00595111
ADAMTS13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74245
TNFRSF1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00349247
BRD-K49039223	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.64154
BRD-K87669982	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05604
DUXA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.9219
GSE186471_1_v_2_carnosol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K41160163_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K36740062_GSK-1070916_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A45498368_WYE-125132_LNCAP_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE171572_3_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K21672174_Ro 28-1675 ?_PC3_24.0_h_160.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K67531128	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27013
TRPS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51952
IGSF9B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00499047
BRD-K03923461	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.21349
HMGCS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81585
GTEX-QEL4-0726-SM-3GIJ5	GTEx Tissue Sample Gene Expression Profiles	1.0	0.974306
BRD-K62007935	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0094
ACAN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00675911
BRD-K74148702_curcumin_SW620_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
Hypoplastic left heart syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.242
RARS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.0512
PPP2R1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12815
BRD-K12343256_trametinib_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KCNH7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00591464
PRRT3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03932
BRD-K69089961	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.8539
NPC1L1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.007282
GTEX-OHPK-1626-SM-2YUN3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.953163
GTEX-XPVG-2226-SM-4B65U	GTEx Tissue Sample Gene Expression Profiles	1.0	1.47136
BRD-K50140147_NVP-TAE684_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
4-PPBP	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.23765
BEND6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.39567
GSE163275_1_v_0_irf8_human	RummaGEO Gene Perturbation Signatures	1.0	null
GM133	BioGPS Cell Line Gene Expression Profiles	1.0	0.85827
S1PR5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00601783
BRD-K67868012_PI-103_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-OXRP-0926-SM-48TC1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07591
TNFAIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26189
UXT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0136916
HEATR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21724
BRD-K68174511_torin-2_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PROM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00771314
BRD-K73802986	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.86742
RSPO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00894007
BRD-K15563106_-666_H1299_6.0_h_177.600006104_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K22651517	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19399
GTEX-NPJ7-0006-SM-3GACR	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.01276
PMC11585558-41467_2024_54547_MOESM8_ESM.xlsx-TP53_vs_WT_DEG_FFPE-gene_name_TP53	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-RVPU-0005-SM-2TF6L	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.884751
BRD-K11554989	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.09686
GTEX-QMRM-0726-SM-2I5G8	GTEx Tissue Sample Gene Expression Profiles	1.0	0.901489
BRD-K53417444_OTSSP167_HCC515_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K90649428	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10934
GTEX-XGQ4-0326-SM-4GIEE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GIMAP6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0096262
BRD-K12517207	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16519
DAGLA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00607417
AKT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3428
MANEA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54713
BRD-U51024685_HG-6-64-01_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RGS7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0108976
8505C	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FFAR3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00788722
GTEX-SNOS-1126-SM-4DM67	GTEx Tissue Sample Gene Expression Profiles	1.0	2.2582
KATOIII	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K10989535	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06373
GTEX-Q2AG-0926-SM-48U1Q	GTEx Tissue Sample Gene Expression Profiles	1.0	0.910235
BRD-K42918627_GSK-2126458_BT20_3_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K42918627_GSK-2126458_LNCAP_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LCP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00477506
BRD-K71566411	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.36261
smallintestine_4d	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.32085
non-membrane-bounded organelle assembly	GO Biological Process Annotations 2023	1.0	null
BRD-K36271521	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07191
Adams-Oliver syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.55
BRD-K49865102_PD-0325901_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K52911425_GDC-0941_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PRSS16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20176
VPS18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47307
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.606
GTEX-UPJH-0126-SM-4IHLL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.97026
GSE218727_0_v_3_zkscan3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
JAML	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00593487
BRD-K58708811	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.0075
BRD-K59491482	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24723
CENPP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72022
KBG syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.691
BRD-K12460934	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24258
IL9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00513393
BRD-K94012289_OSI-027_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BBC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0071559
PYGO2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00963648
GTEX-SIU8-0006-SM-2XCE5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
SEC23IP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47641
BRD-K89336453	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13569
GTEX-U3ZH-0526-SM-3DB75	GTEx Tissue Sample Gene Expression Profiles	1.0	0.908456
FAM91A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63405
GTEX-OXRK-0006-SM-2HML1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.917045
GTEX-XUZC-0326-SM-4BOO8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.831979
TP53BP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00553264
ALG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97493
colonrectum_f	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.067
BRD-K98143437_SB-239063_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
THBS3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.008183
IGSF9B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97917
AUTS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00542688
BRD-K88198340_2-(6,6-dimethoxy-3-oxocyclohexa-1,4-dienylcarbamoyl)phenyl acetate GNFk-3_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-OHPN-2926-SM-3LK65	GTEx Tissue Sample Gene Expression Profiles	1.0	0.956103
BRD-K28296557_Akt inhibitor IV_SW620_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HCC2998	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.19213
BRD-K52911425_GDC-0941_LNCAP_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
u937	HPA Cell Line Gene Expression Profiles	1.0	1.32855
GSE206729_4_v_1_trps1_human	RummaGEO Gene Perturbation Signatures	1.0	null
trovafloxacin_homo sapiens_gpl96_gse9166	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-T6MN-0011-R4A-SM-32QPG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
H2AC12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00690465
BRD-K05699155	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2737
BRD-K64890080_BI 2536_SNUC4_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-O5YW-0006-SM-3LK6E	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.925453
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847224
STRN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87622
BRD-K47063692	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58623
SART1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00649281
BRD-K88510285_B675700.cdx_NOMO1_6.0_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RHOU	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00623248
BRD-K50140147_NVP-TAE684_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K68174511_torin-2_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K88573743_A443654_SKBR3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SIGLEC11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00714619
disease	GWASdb SNP-Disease Associations	1.0	0.025731
SERPINE2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0102793
BRD-K99252563_QL-XII-47_BT20_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
JAZF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.90463
GTEX-V955-1926-SM-4KL1L	GTEx Tissue Sample Gene Expression Profiles	1.0	1.93654
BRD-K49671696_Ketanserin tartrate_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ROS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00658089
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1435
BRD-K72636697_QL-X-138_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K49865102_PD-0325901_HEPG2_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MAPK8IP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00601586
GSE152441,GSE152442_7_v_3_folic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
SAFB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12149
DCK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0053621
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K30019337	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.56908
BRD-K26822808_-666_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
H4C5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00739476
GNL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29999
NEUROD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.32131
GTEX-S33H-0726-SM-4AD6M	GTEx Tissue Sample Gene Expression Profiles	1.0	1.07017
SFRP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00755459
SC5D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44441
MFSD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06264
SKM-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-X4XX-0626-SM-3NMC1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.828373
BRD-K08109215_I-BET_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DNAJC24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46276
GTEX-WRHU-1326-SM-4E3K7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.882428
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3877
BRD-K12184916_NVP-BEZ235_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-QDVN-0006-SM-48U1R	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.29985
PHOX2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.4673
BRD-K64822626_KUC104135 KUC104135N_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-POMQ-0008-SM-48TE7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
ZNF843	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12265
BRD-K28392481_AZD4547_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
KIF2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5208
GTEX-OHPM-2126-SM-3LK75	GTEx Tissue Sample Gene Expression Profiles	1.0	1.9715
SLC30A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00746512
IP6K1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00583506
SARS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84337
GSE160817_4_v_1_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ANKMY2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.75607
SLC4A1AP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00553005
GTEX-PLZ5-0826-SM-3P5ZW	GTEx Tissue Sample Gene Expression Profiles	1.0	0.838048
SIN3A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0122603
OGFOD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0054764
GTEX-XGQ4-0008-SM-4AT3Z	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K53417444_OTSSP167_HCC515_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.355
KYAE-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CHIA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00725446
GTEX-X5EB-2326-SM-46MW5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
PRDM10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.39232
GTEX-T6MN-0011-R11A-SM-32QOX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
TNFRSF10B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0100256
FAM124A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82174
CACNA1S	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00969549
BRD-K79090631_CGP-60474_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SETDB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.005399
cytoplasmic part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
GTEX-SIU7-0006-SM-2XCE6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K06296167	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01799
SIGLEC10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.55886
BRD-K63068307_ZSTK-474_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TNFRSF8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00596751
GTEX-U4B1-0626-SM-3DB8L	GTEx Tissue Sample Gene Expression Profiles	1.0	1.29974
BRD-M47937986_cefatrizine propylene glycol_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ECSIT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46514
BRD-K83972459_JWE-035_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PTPN12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00590383
BRD-K10087503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.92078
RCBTB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00582649
AP1G1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85879
GSE103068_5_v_7_volasertib_human	RummaGEO Drug Perturbation Signatures	1.0	null
ATG16L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66705
APOBEC3D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3677
GTEX-PLZ5-0726-SM-2I5F9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.866915
PIM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00684562
BRD-K49328571_dasatinib_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K10027041	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08216
CLK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.1645
CNTN3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00395422
NRBP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00873964
ACHE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4921
RAD54L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9535
PPP6R3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00955889
BRD-K76115264	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.61292
BRD-K61733751	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.10766
SLA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0057402
BRD-K21025364_NVP-TAE226_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TMEM102	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96915
GLTP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00639657
BRD-K08427390	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05536
BRD-U70626184_BI-2536_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LAIR2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00744601
NUCB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00778594
NDUFA12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00522064
BRD-K30707190_PNU 74654_PC3_24.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Golgi stack	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
BRD-A84174393_MELOXICAM SODIUM_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K88573743_A443654_HME1_3_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DKC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59476
PMC13138062-mmc7.xlsx-DUGs_E2F1_targets-DUGs_E2F1	Rummagene Transcription Factor Associations 2026	1.0	null
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2569
NUP214	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38092
GART	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00614955
BRD-K40175214_torin-1_BT20_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KMT2C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00643852
MAP3K4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0102109
RPP25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32895
PRMT2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00484465
CCDC85B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00521897
BRD-K40175214_torin-1_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1598
DONSON	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37215
GTEX-Q2AI-1226-SM-48U14	GTEx Tissue Sample Gene Expression Profiles	1.0	2.37338
HOXD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4618
BRD-K20028052	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.23527
WDR6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73587
HOXA4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3643
HOXA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5651
BRD-K82002014	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13197
LU-134-A	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38033
GTEX-R55G-2326-SM-2TC61	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06434
DHRS9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00403345
BRD-K36772364_8-{[2-oxo-2-(1-pyrrolidinyl)ethyl]thio}quinoline_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NKX2-8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.79801
PMC8616957-41467_2021_27270_MOESM4_ESM.xlsx-Sheet1-Supplementary_Data_1_Differentially_expressed_genes_FDR_0_05_edgeR_exact_test_in_MLL-AF4_infant-ALL_vs_MLL-AF4_childhood-ALL_KMT2A	Rummagene Transcription Factor Associations 2026	1.0	null
DCANP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.20258
RPLP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24216
GTEX-T6MN-0008-SM-4DM7H	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-A70099008	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34973
LHX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5582
GTEX-QVJO-0011-R10A-SM-2S1QJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.13281
SLC9B1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00816005
GTEX-RNOR-0008-SM-48FEY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.952891
IL17RE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.69124
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847224
HAL-01	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-U70626184_BI-2536_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K57244822	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20273
CCAR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.31643
BRD-K69932463_AZD-8055_LNCAP_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE158834_7_v_4_palmitic acid_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K77108738	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24346
GSE211128_7_v_6_angptl4_human	RummaGEO Gene Perturbation Signatures	1.0	null
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.029344
TWIST1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.22038
BRD-K12184916_NVP-BEZ235_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BIN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22208
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.11215
IM-95	COSMIC Cell Line Gene Mutation Profiles	1.0	null
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04304
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33056
GSE210101,GSE210114_4_v_3_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K89059493_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K30643363	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65394
EGLN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70663
TMIGD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00652329
GTEX-XUYS-0326-SM-47JX2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.35087
blood	GTEx Tissue Gene Expression Profiles	-1.0	-1.06157
GTEX-OHPK-0006-SM-2HMKH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.920921
BRD-K38340366_-666_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K49328571_dasatinib_HA1E_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5175
SCARA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81011
GARIN1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0548
GTEX-OIZH-0326-SM-2HMKC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.26207
SMG9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60408
BRD-K04143779	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02976
BRD-K11558771_-666_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K42436189_AZ20_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PMC6683136-41598_2019_47363_MOESM2_ESM.xlsx-GENE_SET-Positive_correlation_of_ZEB1-AS1_and_other_genes_ZEB1	Rummagene Transcription Factor Associations 2026	1.0	null
ZMYM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80734
PMC13138062-mmc7.xlsx-DUGs_ESR1_targets-DUGs_ESR1	Rummagene Transcription Factor Associations 2026	1.0	null
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919694
BRD-A04510218	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00062
BRD-K83972459_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-N7MS-0126-SM-3TW8O	GTEx Tissue Sample Gene Expression Profiles	1.0	2.878
succinylcholine-chloride	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.00398
BRD-A70931301	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.48875
BRD-K91923964	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12982
GTEX-TKQ1-0126-SM-33HB3	GTEx Tissue Sample Gene Expression Profiles	1.0	1.3896
BRD-K15442833	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.48034
C3orf18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42661
CREB3L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.18122
KP-N-YS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K36363294_I-BET151_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-QLQW-1026-SM-447A9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.32661
SAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5956
KLRG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04204
BRD-K81418486_vorinostat_MCF7_24.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K34088127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49789
AUNIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3116
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9631
NDUFA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81253
FAM174C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33282
COX5B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0043204
CCL4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00504603
ATPSCKMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8857
BRD-A58767537_afatinib_BT20_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-NPJ8-0007-SM-2D7VX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
DPF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67619
BRD-K02526760_QS 11_SW620_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DDIAS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.06449
BRD-K14193598	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58716
ZNF681	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25048
BRD-K76205745_Losartan Potassium_U937_6.0_h_160.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SPTBN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0100672
GTEX-S4Q7-1226-SM-4AD5I	GTEx Tissue Sample Gene Expression Profiles	1.0	2.26934
PDE1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00530606
CNIH4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.27734
BRD-K14355517_NCGC00184716-01_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K72034681	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.11312
BRD-K49328571_dasatinib_HT29_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TAFAZZIN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00525875
ATF6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34849
GTEX-OHPN-2826-SM-3LK67	GTEx Tissue Sample Gene Expression Profiles	1.0	0.937935
chr15_30344493_G_A_b38	GTEx eQTL 2025	1.0	2.76089
NANOG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10087
NUCB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82584
MYO3B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00578778
SUPV3L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.18818
ZCCHC10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12693
PITPNC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0106765
POU6F1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64516
SUCNR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00595106
ITK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00691238
BRD-K68174511_torin-2_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K77925998_QUIPAZINE MALEATE_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
BRD-K93875187	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.40917
VCX3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50396
BRD-K49755501	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06267
GTEX-T6MN-0011-R10A-SM-32QP7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.972229
CXCR4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.53792
GTEX-NPJ8-1726-SM-2YUNB	GTEx Tissue Sample Gene Expression Profiles	1.0	0.954744
RAB6C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3418
FOXP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1566
GTEX-PVOW-0626-SM-2XCF6	GTEx Tissue Sample Gene Expression Profiles	1.0	0.896913
BRD-K97339945	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.6754
BRD-K53953065	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24653
NUCB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37619
GTEX-P44H-1126-SM-48TBU	GTEx Tissue Sample Gene Expression Profiles	1.0	0.914466
IGF2BP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00522111
GJD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00987849
SLIRP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44164
SF3B2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41556
KRT5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00602565
PCCB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00422019
CRTC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60389
BRD-K36363294_I-BET151_HEPG2_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ETAA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.51151
SHARPIN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0042439
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
COL9A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07272
RPL27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02867
GTEX-Q2AG-0005-SM-33HBX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K67439147_SIB 1893_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-VJYA-0426-SM-3GIJK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.17601
BRD-K56343971_vemurafenib_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K16478699_PLX-4720_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RERF-LC-MS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.910856
BRD-K18865369	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.75163
heart_5b	HPA Tissue Sample Gene Expression Profiles	1.0	0.884033
SQSTM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00848612
BRD-K87654551	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31649
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.85652
BRD-K52911425_GDC-0941_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20567
FBLN5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00628333
RPS20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51368
PMC8766486-42003_2021_2990_MOESM3_ESM.xlsx-ST18-Supplementary_Data_18_Gene_burden_for_deletions_by_subtype_ST18	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K01436366_XMD-1150_MDAMB231_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TSSK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0059749
BRD-K65529782	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51595
NQO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29608
CIITA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45531
TOMM5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00741263
BRD-K93747373_HG-5-113-01_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A67788537_Salermide_SW480_6.0_h_120.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
DYRK1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48869
BRD-K46056750_AZD-7762_BT20_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ATG16L1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0055253
GTEX-OHPL-0126-SM-2HMJ7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.98815
SLC1A6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00611269
BRD-K30937833	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59221
SPPL2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00717842
GTEX-T6MN-0005-SM-32PLJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06791
STING1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00722777
SHC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00805681
ARPC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.004025
NCAPH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00742044
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6338
BRD-K46056750_AZD-7762_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K99545815_PF-562271_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MID1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06925
BRD-K16496880	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00708
DPY19L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70863
GSE155031_5_v_0_dextran_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE178340_1_v_3_carfilzomib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DOT1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6464
TEF	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00766569
GTEX-R53T-0326-SM-48FEC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.893973
KCTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02287
TAF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00515187
HTR2C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00709573
Atrioventricular septal defect	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.22
ADPRH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63399
GRIN2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00912365
DDX50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37574
ANXA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66846
PAFAH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82456
BTG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31316
SLC38A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00737297
BRD-K12184916_NVP-BEZ235_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RFX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1194
GTEX-S4P3-0326-SM-4AD6P	GTEx Tissue Sample Gene Expression Profiles	1.0	0.945591
GTEX-WZTO-0006-SM-3NM9T	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
HSPA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66477
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7103
IER3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0044739
GTEX-S4Q7-0326-SM-3K2B1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.17804
TRPM6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00507754
F12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00547588
GTEX-POMQ-2126-SM-2S1OJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-A58767537_afatinib_HME1_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
POLR2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00602039
CAL-39	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC8017594-LSA-2019-00332_Table_S1_Table_12.xls-DCX-KD_LIS1-KD_DEGs-LIS1-KD_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-P4PQ-2626-SM-33HC9	GTEx Tissue Sample Gene Expression Profiles	1.0	1.30378
H2BC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58764
GTEX-XUZC-2126-SM-4BRW8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1419
SU-DHL-10	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ERBB3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00519995
ELN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00429066
BRD-K77908580_-666_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
STAG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.538
BRD-K74733595_A2478_A375_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RGS16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27163
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8796
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0394
SLC5A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10898
TNFRSF13B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0083172
TUBE1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00574446
OMC-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K53903639_480743.cdx_AGS_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HMGCS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00536674
BRD-K40175214_torin-1_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.986493
DMWD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50404
BRD-K81647247	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10772
TLR9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00841503
BRD-K81522725	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.41882
AIP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00569121
BRD-K78438852	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.82968
ZNF469	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9927
BRD-K24206299	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1974
LOVO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3774
GADD45G	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57051
CARD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.96164
TRIM46	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00572441
XPO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.013769
BRD-K41895714_AS-605240_HEPG2_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PHOX2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.7522
GSE235701,GSE261434_2_v_3_enasidenib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
brain disease	GWASdb SNP-Disease Associations	1.0	0.200041
DARS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00831797
SLCO1A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.006552
SLC39A11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00702521
BRD-K79090631_CGP-60474_HEPG2_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K40175214_torin-1_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ATXN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46406
BRD-K49328571_dasatinib_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LHX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1999
CRLF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00756565
CWC25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14796
NOTCH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00397454
BRD-K81199760	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.42209
GSE217776,GSE217829_2_v_6_sgf29_human	RummaGEO Gene Perturbation Signatures	1.0	null
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32919
MYH2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00878355
BRD-K46445956	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07472
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.419
Placenta	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-2.27687
GTEX-PLZ5-0006-SM-2S1NZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K70831943_-666_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CXCL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00437534
BRD-K54687541_3-isobutyl-6-{4-[3-(trifluoromethyl)phenyl]piperazin-1-yl}pyrimidine-2,4(1H,3H)-dione_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ULK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00667224
BRD-K02708799_GSK-1059615_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TIE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.26126
BRD-K42918627_GSK-2126458_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CKS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00516883
MBD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.37547
BRD-U51024685_HG-6-64-01_A375_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K50140147_NVP-TAE684_HT29_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CCDC103	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53998
BRD-U51024685_HG-6-64-01_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K56183302	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.042
RMI1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41829
SPP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00376584
GSE109140_0_v_3_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
SDK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00912325
ASB16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.58364
BRD-K88573743_A443654_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PMC11426526-ppat.1012555.s011.xlsx-DEG_MDDC_Jurkat_LPS_vs_MDDC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
CCDC116	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00735008
BRD-K29614616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.27209
GTEX-XAJ8-1326-SM-47JYT	GTEx Tissue Sample Gene Expression Profiles	1.0	2.44192
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3979
GTEX-RWS6-0626-SM-2XCAS	GTEx Tissue Sample Gene Expression Profiles	1.0	0.871744
GTEX-WVLH-3026-SM-3MJG9	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00879
BRD-K85606544_HKI-272_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K92849826	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43535
ALKBH8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10453
BRD-K56745457_6-azauridine_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
M14	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.05447
GTEX-TML8-1326-SM-4DXTO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2183
RHOA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21277
BRD-K08799216_pelitinib_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MAP3K14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00723324
CIAO3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76395
BRD-K87670244	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13435
GSE168602,GSE168604_2_v_6_selumetinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
TestisGermCell	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.2713
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
NCI-H2804	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919694
LIVF001-021	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29994
BIRC6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.69657
BRD-K72636697_QL-X-138_HS578T_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K78126613_MENADIONE_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K13094524_PFI-1_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SSR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78645
BRD-K53414658_tivozanib_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SIRT6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00856185
ZNF330	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17699
GTEX-OXRO-0011-R10A-SM-2I5EH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.850236
MX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0080059
BRD-K72238567_656402-250MG_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K15563106_-666_EFO27_6.0_h_177.6_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ATF7IP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.03589
VSIG10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00523122
C1orf116	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87272
PCSK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00610081
GTEX-RNOR-0926-SM-2TF56	GTEx Tissue Sample Gene Expression Profiles	1.0	1.07826
ZPBP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0061251
SLC4A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46531
FAM50A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84378
UNC13D	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00494276
BRD-K21680192_mitoxantrone_PC3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K78431006_crizotinib_BT20_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0641
BRD-K22134346_simvastatin_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RCBTB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33828
GTEX-XXEK-0005-SM-4BRWJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.17138
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.985573
DUSP7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00619109
BRD-K49865102_PD-0325901_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K12343256_trametinib_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KIF20B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52762
BRD-K40175214_torin-1_HEPG2_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CTNNAL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45041
SOCS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00659672
GTEX-Q2AG-0826-SM-2HMKF	GTEx Tissue Sample Gene Expression Profiles	1.0	0.851311
GJB7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00622598
GABPA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17793
KCNQ4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00575844
GSE178340_7_v_9_carfilzomib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TCCSUP	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BCL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0100855
GSE210101,GSE210114_6_v_3_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-WL46-0011-R10A-SM-3MJFQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.09933
SPATA13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.70325
FOXL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87254
BRD-K06436323_3-ethyl-6-{4-[3-(trifluoromethyl)phenyl]piperazin-1-yl}pyrimidine-2,4(1H,3H)-dione_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K53417444_OTSSP167_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-U3ZG-0326-SM-47JXN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07692
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12373
BRD-A13122391_16-HYDROXYTRIPTOLIDE_RMUGS_6.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SALL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00661276
PRAG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00762693
PMC12055596-41375_2025_2570_MOESM4_ESM.xlsx-PDX1-Unnamed_13_PDX1	Rummagene Transcription Factor Associations 2026	1.0	null
DLD1	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.0312
BRD-K64860451	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.667
GSE103309_2_v_0_ube3a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K23975481	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06014
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3176
P31-FUJ	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SMAD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87791
LIVF001-015	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.81093
CERS6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2097
C1orf43	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69959
BRD-K02708799_GSK-1059615_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GUCY2D	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00840698
GTEX-XLM4-0011-R7A-SM-4AT5L	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.24471
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.85652
GSE166914_1_v_0_abemaciclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
chr15_31584013_G_T_b38	GTEx eQTL 2025	1.0	1.49327
BLTP3A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0066858
RBBP6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0129491
BRD-K50234570_-666_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
POPDC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00982588
BRD-A47513740_calyculin A_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
OPA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37821
GSE227592_10_v_3_adar_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K30655307	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38422
TP53	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0103507
GTEX-T2IS-0008-SM-4DM75	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.05554
TMEM63B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.6275
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0746
GTEX-P4QR-0008-SM-48TE2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
FAAP24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90451
gemcitabine_homo sapiens_gpl96_gse6914	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-T6MN-2026-SM-4DM7L	GTEx Tissue Sample Gene Expression Profiles	1.0	2.02506
GTEX-WZTO-0826-SM-3NM8Q	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.09902
GSE158834_7_v_5_palmitic acid_human	RummaGEO Drug Perturbation Signatures	-1.0	null
KHK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44642
ZNF844	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56213
BRD-K31660953	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44749
BRD-K42918627_GSK-2126458_A549_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A50454580_Axon1408_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SF3B4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38846
GTEX-R55C-1426-SM-48FED	GTEx Tissue Sample Gene Expression Profiles	1.0	1.87599
GTEX-XBEC-0126-SM-4GIDT	GTEx Tissue Sample Gene Expression Profiles	1.0	2.263
HARA	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LGALS9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00610093
BRD-K07464613	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.75525
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.0183
XBP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7337
KIF19	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00929902
BRD-K62708569	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.37797
BRD-A94659883	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51942
MRPS18B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28162
Tetralogy of Fallot	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.062
BRD-U64521890_XMD16-144_HS578T_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CDK15	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00909329
NDFIP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00455262
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1327
PMC8649869-EMMM-13-e14351-s012.xlsx-Common_downregulated_elements-264_common_elements_in_siY_T_SRF_DOWN_and_siATF4_SRF_DOWN_SRF	Rummagene Transcription Factor Associations 2026	1.0	null
RAB7A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56168
GSE178340_1_v_2_carfilzomib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DENND4C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35918
BRD-K14681218	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61403
POLE2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00354591
BRD-K57080016_selumetinib_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3419
BRD-K41895714_AS-605240_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SE5C-0006-SM-4BRW5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.988215
BRD-K68174511_torin-2_A549_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
dexamethasone_homo sapiens_gpl6244_gse20963	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K42918627_GSK-2126458_PC3_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7834
EAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5043
GSE216273,GSE216292_14_v_6_palbociclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SYNCRIP_OE_GDS1806_82_human_T-lymphocytes from normal donors were activated with anti-CD3 and IL2	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
MYC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00714309
NDUFS4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00458658
GXYLT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4317
NANOGP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52743
BRD-K17854062	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.56564
BRD-K17140735_-666_NCIH1694_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ESR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00461952
CD248	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.83733
ATP1B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57919
BRD-K50704115	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.61374
MDA-MB-453	COSMIC Cell Line Gene Mutation Profiles	1.0	null
C17orf75	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48651
epilepsy syndrome	GWASdb SNP-Disease Associations	1.0	1.12333
GTEX-UJMC-0326-SM-3GAE2	GTEx Tissue Sample Gene Expression Profiles	1.0	0.892977
CD47	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00568319
BRD-K42191735_buparlisib_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SEC61B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53421
GTEX-XBED-0003-SM-47JWP	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.830374
GTEX-UTHO-0011-R4A-SM-3GIJP	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
Golgi apparatus subcompartment	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04304
BRD-K42918627_GSK-2126458_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NAA35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.52684
BRD-K07667918_linsitinib_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16554
APEX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.06455
GTEX-XMD1-0011-R10A-SM-4AT4A	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.840538
PNLIP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00811416
BRD-K12502280_TG101348_PC3_24.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE223893_2_v_9_setd2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
G59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43547
BRD-K26351062	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07534
GTEX-XUJ4-0326-SM-4BOP9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.900307
GSE205163,GSE205164_2_v_0_znf808_human	RummaGEO Gene Perturbation Signatures	1.0	null
MUC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34575
BRD-K83972459_-666_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DUSP6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00895667
bonemarrow_6b	HPA Tissue Sample Gene Expression Profiles	1.0	0.968271
BRD-K66884694_NCGC00167398-02_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PTPRZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58808
GTEX-UPIC-0826-SM-3GADQ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.990036
BRD-K74148702_curcumin_HA1E_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K72135113	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.50527
BRD-K98143437_SB-239063_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-XQ3S-0006-SM-4BOQ4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.24696
GABARAPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2442
ALAS1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00223742
EVI2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00576781
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5401
BRD-K57821544	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25652
GPT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72033
GTEX-OIZI-0005-SM-2XCED	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8059
RNF128	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00555117
IHO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00547536
BRD-K62182950	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.71226
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6079
PPP3R2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00525638
BRD-K07762528	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.0966
CA10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00657286
BRD-K28846321	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01464
GTEX-SNOS-0526-SM-4DM54	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2146
GTEX-XBED-0126-SM-47JY7	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0574
GTEX-NPJ8-0526-SM-3MJHN	GTEx Tissue Sample Gene Expression Profiles	1.0	0.847895
GTEX-POMQ-0426-SM-3P61G	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14588
BRD-K57080016_selumetinib_BT20_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HOMER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9877
BRD-K13094524_PFI-1_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NAT9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04823
BRD-K84310612	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49289
BRD-K14436020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0655
BCR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47916
TOP2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00635536
DNASE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.79385
GTEX-Q2AH-1126-SM-48TZM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.17433
GTEX-XQ8I-0926-SM-4BOOF	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.999056
GTEX-WFG7-0005-SM-3GIKM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.993697
PMC7498599-41467_2020_18508_MOESM11_ESM.xlsx-4cell_CTCF-Unnamed_2_CTCF	Rummagene Transcription Factor Associations 2026	1.0	null
vitamin c_homo sapiens_gpl570_gse11919	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE198683_1_v_0_dexamethasone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	103.565
BRD-K95435023_PHA-665752_HEPG2_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LIME1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00573311
GTEX-PLZ6-0008-SM-48TD5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-A29082194_GITOXIGENIN_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CYP2B6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00522937
SKA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10409
HCC-56	COSMIC Cell Line Gene Mutation Profiles	1.0	null
DNAJC8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51474
GTEX-WRHU-0926-SM-4E3IG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.13487
TOMM5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53629
GTEX-P78B-1326-SM-3P611	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
APEH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41587
Ulcerative Colitis_Peripheral blood mononuclear cell_GSE3365	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.52943
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.3041
BRD-K00930335	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14016
MTMR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79309
GTEX-S3XE-0008-SM-3NM8O	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
FRAT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48679
BRD-K88573743_A443654_MCF10A_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K94325918_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
WWC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24497
GSE218727_2_v_3_zkscan3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38546
BRD-A14395271_MESORIDAZINE_RKO_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMC7029036-41598_2020_59469_MOESM2_ESM.xlsx-NR4A1_Targetome-Genes_NR4A1	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K53417444_OTSSP167_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
496100393_HIP_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.40868
PYGM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00768526
BRD-K13390322_AT-7519_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K47983010_BX-795_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KCNJ13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00610262
SEPTIN6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42525
SLITRK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.87964
BMPR1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71505
BRD-A20697603_598226_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SLC12A9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.66838
SCLY	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00839769
ADO	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00774568
GSE109140_2_v_3_valproic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-Y8E5-0006-SM-47JWQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07609
ASAH2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00494041
BCL2L2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00476204
GTEX-O5YT-0008-SM-4E3IQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.11484
BRD-K98061543	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17112
TBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.747
testis_7a	HPA Tissue Sample Gene Expression Profiles	1.0	1.77382
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.91807
GTEX-UPJH-0001-SM-3NMDE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.965836
SLC16A14	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00707193
BRD-K24883912	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02101
GTEX-TSE9-0626-SM-3DB8B	GTEx Tissue Sample Gene Expression Profiles	1.0	1.18587
BRD-K86298765	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13333
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3284
BRD-K09117810	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.77106
BRD-K35407043	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.92632
organelle organization	GO Biological Process Annotations 2025	1.0	null
CRO-AP2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LGI4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4731
IL1RN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00800089
DNAJB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.62685
GTEX-WY7C-0226-SM-3NB37	GTEx Tissue Sample Gene Expression Profiles	1.0	1.23904
CUL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0065635
ARGFX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73089
BRD-K71419092	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.70096
ADSS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00396913
DOCK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00666979
HIPK4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00844693
BRD-K08547377_CPT 11_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K73610817_NCGC00183371-01_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K93747373_HG-5-113-01_SKBR3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PRMT8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0077063
GTEX-XUJ4-2626-SM-4BOQ3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08385
BRD-A33596659	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.34496
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
BRD-K94012289_OSI-027_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
EID2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66236
SLC35B3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34995
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7604
BRD-K19930413	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.36015
GTEX-T5JW-1326-SM-4DM5G	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.867443
GTEX-NFK9-0626-SM-2HMIV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04019
MITF	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00689571
BRD-K50140147_CT-TAE684_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BUD23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07449
GTEX-QVJO-0526-SM-447CE	GTEx Tissue Sample Gene Expression Profiles	1.0	1.15413
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9682
BRD-K58985886	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.24235
PMC7498599-41467_2020_18508_MOESM11_ESM.xlsx-4cell_CTCF-Unnamed_3_CTCF	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-P78B-0005-SM-2I5GM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.946939
BSX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.9562
GTEX-X4XX-0926-SM-46MV7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.903873
PEA15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67979
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.61496
BRD-U64521890_XMD16-144_SKBR3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TBPL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94226
PRKDC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54676
CD2BP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.90697
BRD-K28952606	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.16848
TSNAX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46678
CD34+	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.85518
NXPH4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00707607
chr15_30486148_T_C_b38	GTEx eQTL 2025	1.0	1.33433
BRD-K89933563	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17214
RUNX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8427
RXFP4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.006766
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2965
BRD-K41026056	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06053
OXCT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52027
TRIB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00592794
FGB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00741838
BRD-K08547377_CPT 11_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SMYD1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00533918
HMOX2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00505799
Ebstein anomaly	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.584
TNFRSF10A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.007805
GTEX-S32W-0726-SM-2XCBL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.24579
BRD-U82589721_-666_SKB_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MPIG6B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00534414
BRD-K37387086	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.63253
GTEX-UTHO-0011-R6A-SM-3GIJW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.16881
GTEX-VUSH-0004-SM-3P61T	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.23176
testis_7d	HPA Tissue Sample Gene Expression Profiles	1.0	1.8158
BOC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0056369
BRD-K33503286	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.58513
H4C14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.28202
GSE158834_12_v_8_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
MAP3K20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34614
AIFM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.61421
IFI27L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66761
BRD-U51024685_HG-6-64-01_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K94012289_OSI-027_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TRPM7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00649253
GSE158893,GSE158916_0_v_1_atf3_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF700	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2198
BRD-K68065987_MK-2206_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ALPL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00522084
P2RY12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00663514
BRD-K78625574	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01219
PPP4R1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80306
BRD-K16479784	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54934
GRM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00711424
GTEX-OXRL-1626-SM-2YUMU	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.09963
OAS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00895979
SAP18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.6787
BRD-K57080016_selumetinib_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PPIP5K1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00535474
GRM7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00802876
THTPA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00588653
ZNF517	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43137
DBP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7125
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9762
GTEX-S32W-1426-SM-4AD66	GTEx Tissue Sample Gene Expression Profiles	1.0	0.841643
GTEX-XBEC-0006-SM-4AT5T	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.2589
GTEX-WXYG-2026-SM-4E3IY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.01342
GTEX-T6MO-0226-SM-32QOL	GTEx Tissue Sample Gene Expression Profiles	1.0	0.991427
PIERCE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16973
BRD-K57096799	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05184
BRD-K36847650	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.16766
KPNA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.93341
HSD17B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68897
BRD-K67868012_PI-103_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PRKCZ	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00564246
BRD-K03383196	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47866
F8A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.9238
TMEM104	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42199
intracellular organelle	GO Cellular Component Annotations 2015	1.0	null
NKX2-5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00741025
VPS13B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00494127
KS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K69932463_AZD-8055_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SAR1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37969
BRD-K49328571_dasatinib_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
OLIG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00633523
PMC10111863-supp_gad.350269.122_Supplemental_Paun350269_FileS3.xlsx-A_ASCL1-regulated_DGE-geneID_ASCL1	Rummagene Transcription Factor Associations 2026	1.0	null
ATP5MC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56087
TPR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00403617
BRD-K96263742_-666_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
AGTRAP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00587215
BICD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06204
SK-MEL-24	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2721
IL12RB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00554332
skeletalmuscle_c	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.3377
MAP3K2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00644173
BRD-K83972459_JWE-035_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PPP1R1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00608033
TM4SF5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00722453
TIPARP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45461
MCMBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56178
BRD-K95858622_NCGC00182609-01_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8092
POM121C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48315
BRD-K61943321	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.49306
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7252
CHRNA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00882245
BRD-K73364700	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.96292
ARID4A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00687677
PPP6C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00883085
UPF3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86941
GTEX-X585-1026-SM-46MW6	GTEx Tissue Sample Gene Expression Profiles	1.0	0.878608
HIF1AN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00576993
BABAM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.96271
RHOU	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91677
GTEX-RVPV-0011-R5A-SM-2TF69	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K65987370	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.25999
BRD-K21680192_mitoxantrone_MCF10A_3_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-PX3G-2626-SM-2I3EG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.50135
nerve	GTEx Tissue Gene Expression Profiles	1.0	0.827978
BRD-K52340217	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16678
ZEB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05939
LIVF001-028	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.48059
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2025
NR1H2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49554
GSE158834_1_v_8_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
THEMIS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00840401
CCZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02535
cis-Golgi network	GO Cellular Component Annotations 2023	1.0	null
GAS8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77188
BRD-K94012289_OSI-027_HA1E_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BALL-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EXTL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01755
CCR6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00605593
BRD-K90163297	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51448
BRD-K16478699_PLX-4720_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GUCY1A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00497672
CRTC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.17029
CAL-120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877433
BRD-K90048234	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.19981
PRRX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5974
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.985573
CACNG3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0069762
BRD-K88573743_A443654_MCF7_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PRKX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28497
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.3124
BRD-K53634892	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.04332
BRD-K00337317_NU-7441_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K87666020	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.70921
PPP1R15A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00558748
RNF115	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.13062
NEDD8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00413982
BRD-K73025859	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.71235
TMCO3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00762271
PMC12696503-mmc2.xlsx-ST15_KD_RNA-seq_diff_expr-ensembl_AR	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-PWCY-0008-SM-48TE9	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06328
NDUFAF3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.007025
HTR1F	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00566694
GTEX-XUJ4-0005-SM-4BOQ6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
ACVR2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00807688
BRD-K69932463_AZD-8055_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-S33H-0126-SM-4AD62	GTEx Tissue Sample Gene Expression Profiles	1.0	1.52032
cellular_component	GO Cellular Component Annotations 2015	1.0	null
TCN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00581378
BRD-A79768653_sirolimus_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K93747373_HG-5-113-01_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE158834_0_v_8_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-T6MN-2526-SM-32PMN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.33445
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72944
GTEX-U3ZH-0002-SM-3NMDD	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K95676198_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RNF25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52634
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.61053
TBCC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78868
GRIA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00674816
HADH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23779
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22267
BRD-K00337317_NU-7441_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K77869064	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.22319
SIGLEC6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00493633
GTEX-NL4W-0008-SM-4E3I2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.976731
UGT3A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00651767
MEAF6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.299
GNPTG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34646
PRXL2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79012
GTEX-QESD-2026-SM-447BI	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BCAT1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00971347
Golgi cisterna membrane	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
WEE2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00702984
HGC-27	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-RM2N-0526-SM-2TF4N	GTEx Tissue Sample Gene Expression Profiles	1.0	1.21137
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847224
BRD-K56957303	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01755
GPC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00582324
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42334
BRD-K12184916_NVP-BEZ235_A549_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MEST	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46957
GJB6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00839422
NFATC1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00559585
GSE148200_3_v_2_gemcitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-P4PP-2026-SM-3P61N	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09991
VRK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00991726
UBA3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00561229
BRD-A68427178	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.11598
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9811
GTEX-PWCY-0926-SM-48TD7	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.85375
GSE242290_3_v_10_glutathione_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GTEX-OOBJ-2126-SM-3NB1N	GTEx Tissue Sample Gene Expression Profiles	1.0	1.89984
BRD-K92317137_-666_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PRKAR1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00358316
GSE210101,GSE210114_6_v_10_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SLC4A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00556584
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0397
CRY2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94589
BRD-K07667918_linsitinib_A549_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CMKLR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00653338
PIK3CD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.24736
FEZ1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00546919
GTEX-U3ZM-0126-SM-3DB8M	GTEx Tissue Sample Gene Expression Profiles	1.0	0.882051
BRD-K78659596_MLN2238_PL21_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
all	GWASdb SNP-Phenotype Associations	1.0	0.029283
GTEX-Q2AG-1126-SM-48U1P	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.961323
BRD-K18519876	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.27345
BRD-K42918627_GSK-2126458_LNCAP_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1123
SBK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56343
BRD-K12077693	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.28238
thp1	HPA Cell Line Gene Expression Profiles	1.0	1.30769
KCNJ15	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00824254
BRD-K55766625	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06903
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0735
ZNF367	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00703571
GTEX-WHSB-0005-SM-3LK7C	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.38304
GSE103068_0_v_7_volasertib_human	RummaGEO Drug Perturbation Signatures	1.0	null
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3728
GTEX-SUCS-1726-SM-32PM8	GTEx Tissue Sample Gene Expression Profiles	1.0	0.923165
CMTM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01934
LRRC37A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00541026
PITPNM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0111819
DAUDI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.97052
animal	TISSUES Experimental Tissue Protein Expression Evidence Scores	1.0	0.766457
GTEX-UPK5-0006-SM-3GAD8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.37455
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
SLC24A4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00854036
TMPRSS4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0080665
endomembrane system organization	GO Biological Process Annotations 2023	1.0	null
GSE158834_1_v_8_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K95609758_-666_RKO_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K13390322_AT-7519_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RUNX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6429
GTEX-SUCS-0926-SM-4DM4Z	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.825913
testis_7b	HPA Tissue Sample Gene Expression Profiles	1.0	1.61007
REST	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00604443
GTEX-S32W-2526-SM-2XCB8	GTEx Tissue Sample Gene Expression Profiles	1.0	0.95946
BRD-K77041516	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.3013
DDX59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35442
RAB27A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00417461
GTEX-T5JC-0626-SM-3NMA6	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1031
CNNM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19852
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2015	1.0	null
E2F1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.71752
GTEX-Q734-0006-SM-2I3FJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.824572
TGIF2LX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0459
BRD-K94012289_OSI-027_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SNOS-0008-SM-4DM6I	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.10364
TEX2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00461899
BRD-K36120694	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.87982
CDK11B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00604265
KCNE1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00800254
PRSS53	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0109636
GCLM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49046
BTNL8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00726334
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09979
BRD-K98824517_-666_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GSE158834_10_v_6_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
DENND6A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43557
FetalThyroid	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.5846
BRD-K42918627_GSK-2126458_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
AOC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0174
liver	GTEx Tissue Gene Expression Profiles	-1.0	-1.55373
plicamycin	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.75478
BRD-K69932463_AZD-8055_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GCH1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.005253
PMC8405683-41419_2021_4120_MOESM2_ESM.xlsx-Sheet1-Table_S2_MYCN-responsive_gene_list_1_5_fold_p_0_05_MYCN	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-X8HC-0726-SM-46MWG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.02371
TNFRSF10A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69282
BRD-K41895714_AS-605240_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TLR8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00880762
PSRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24724
MGST1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32568
GTEX-N7MS-0007-SM-2D7W1	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.88461
FCHO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.15277
BICRAL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.27205
INKA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00608804
TPSAB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0104079
GTEX-PSDG-0726-SM-2I5FN	GTEx Tissue Sample Gene Expression Profiles	1.0	1.16094
C1orf109	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31342
PMC12498537-KRNB_A_2569192_SM1642.docx-4-ZNF672_ZNF672	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-U61997977_WZ-4-145_HS578T_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
STAM	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00470606
BRD-K46056750_AZD-7762_HA1E_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-WFJO-1026-SM-3GIKL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.22993
TRAF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00823099
RHCE	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00471109
GTEX-PSDG-0008-SM-48TE5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.1087
GTEX-X88G-0006-SM-47JX5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.03914
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.827408
TTI1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0115083
ARL17B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00972089
BRD-K04611090	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.28433
FDPS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00375781
BRD-K68174511_torin-2_A549_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TSLP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00690799
KCND2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00585742
AK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.956
Thymus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.19333
GTEX-XQ3S-0126-SM-4BOO9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.980635
GSE235701,GSE261434_0_v_1_enasidenib_human	RummaGEO Drug Perturbation Signatures	1.0	null
CD248	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00607206
FEN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00531907
KIT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0194106
SUCLA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02603
ILK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00575703
BRD-K26431593	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10896
GTEX-XUW1-1026-SM-4BONY	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19833
GTEX-RVPV-0008-SM-47JYW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.99833
NCI-H1963	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-WZTO-2826-SM-3NM8P	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.84247
MAFA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4742
BRD-K41895714_AS-605240_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HO-1-N-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
OTX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.8215
CFAP46	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00678872
GTEX-XMD1-2826-SM-4AT5F	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GSE158834_11_v_8_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
PTK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00568741
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.74654
GSE185519_4_v_0_gilteritinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-S33H-2326-SM-2XCB3	GTEx Tissue Sample Gene Expression Profiles	1.0	0.972643
GTEX-XMK1-0626-SM-4B65A	GTEx Tissue Sample Gene Expression Profiles	1.0	1.2706
AMHR2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00488201
BRD-U64521890_XMD16-144_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PRPF38B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00590174
CBX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12059
RPL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72383
CITED1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.57121
GTEX-VUSG-0126-SM-4KL1X	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.39003
GTEX-T5JW-0008-SM-4DM5X	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.852071
BCL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49914
GTEX-V1D1-0926-SM-4JBHQ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08499
BRD-K84203638_4-[(1-methyl-2-oxo-1,2-dihydroquinolin-4-yl)oxy]-N-(4-methylpyridin-2-yl)butanamide_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-QDT8-0926-SM-32PL2	GTEx Tissue Sample Gene Expression Profiles	1.0	1.12192
BRD-A18328003_GDC-0980_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MRPL44	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40045
HDC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00693442
GTEX-SIU7-1126-SM-2XCDW	GTEx Tissue Sample Gene Expression Profiles	1.0	0.902287
MTOR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00698946
SS18L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6361
BRD-K88510285_B675700.cdx_SW620_6.0_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K63761383	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2063
SBC-5	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ACOT9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40562
GANAB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00475498
GTEX-OIZG-0226-SM-2TC5L	GTEx Tissue Sample Gene Expression Profiles	1.0	1.28673
BRD-K12184916_NVP-BEZ235_MCF7_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K88573743_A443654_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SSA3-0008-SM-47JWJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.92259
GTEX-XMD1-0011-R11A-SM-4AT5J	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
MVK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00744713
LIME1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68582
BRD-K40175214_torin-1_A549_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K18181387	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16184
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2025	1.0	null
BRD-K03542527	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.6457
BRD-K67535324	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.41273
JHH-7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-XGQ4-0426-SM-4AT4I	GTEx Tissue Sample Gene Expression Profiles	1.0	0.860963
HECA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26637
GTEX-OXRO-0011-R9A-SM-3NB1X	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.40171
BRD-K98793503	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08166
BRD-K77024507	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12731
ADAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21504
BRD-K04853698_LDN-193189_HS578T_3_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K13196166	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.69216
FBXW4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43182
GTEX-TKQ2-0006-SM-33HBH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K02708799_GSK-1059615_PC3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
tardbp_19910924_hek293e_lof_human_gpl570_gds3730	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.198689
PCSK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98768
GTEX-XUZC-0008-SM-4BOQG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.01489
BRD-A58767537_afatinib_HME1_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CATSPER3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00671105
SETD7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00735609
BRD-A50675702_FIPRONIL_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.85652
GSE201309_5_v_0_matrine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PPP1R3F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8314
UGGT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99951
BRD-K83312314	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.12336
BRD-K83946740	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05698
BRD-K46056750_AZD-7762_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-RWSA-0826-SM-2XCBF	GTEx Tissue Sample Gene Expression Profiles	1.0	1.02043
BRD-K48221699	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10369
GTEX-WWYW-0005-SM-3NB3K	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.14472
GTEX-PVOW-0008-SM-48TE8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K21680192_mitoxantrone_HCC515_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K64890080_BI-2536_BT20_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K13566078_BMS-345541_MCF7_3_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GSTM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70107
GTEX-R55E-0726-SM-48FCZ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.86999
ALPG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00864322
BRD-K76544773	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2692
NEUROD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4669
GTEX-WH7G-1926-SM-4LVMM	GTEx Tissue Sample Gene Expression Profiles	1.0	2.26436
BRD-K76969307_CG-930_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UBE2D3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00656283
GSE214382,GSE214383_5_v_2_ascl1_human	RummaGEO Gene Perturbation Signatures	1.0	null
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.0618
BRD-K32636001_MLS-0437446.0001_HT29_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-TKQ2-1526-SM-4DXUN	GTEx Tissue Sample Gene Expression Profiles	1.0	2.15834
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.857357
GTEX-WHPG-0226-SM-3NMB9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.928927
GSE158834_11_v_8_palmitic acid_human	RummaGEO Drug Perturbation Signatures	1.0	null
GTEX-RU72-0006-SM-2TF65	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K49328571_dasatinib_HA1E_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
P3H3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0048279
BRD-K92462786	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12437
BRD-A77824596_FLUOCINOLONE ACETONIDE_A375_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
FASTKD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00507556
TMEM67	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0118075
AIF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0091042
SDC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00540352
GTEX-WHSB-1626-SM-3LK6J	GTEx Tissue Sample Gene Expression Profiles	1.0	0.835395
UBAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29869
GTEX-PX3G-0826-SM-48TZS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.06019
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.4696
PELP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00395538
LDB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.11743
TADA2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49032
BCL11A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5023
GTEX-R55E-1326-SM-48FCR	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.852421
ZNF215	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.13381
BRD-K79090631_CGP-60474_SKBR3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HTR1D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.1147
BRD-K23029982	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.10839
BRD-A18328003_GDC-0980_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NPDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87887
GTEX-WFG8-2426-SM-3GILL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-A28105619_curcubitacin I_SW620_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MTNR1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00778275
GTEX-R53T-0526-SM-3GADL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.39226
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05947
IVNS1ABP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8979
BRD-K56653679_-666_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RPL23A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00931862
PMC11148097-41698_2024_569_MOESM2_ESM.pdf-223-IRF3_IRF3	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K69328504_L-690,488_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSDMB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0072632
TRIM16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01786
BRD-K88573743_A443654_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE210101,GSE210114_1_v_3_urod_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SLC25A21	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00548417
FGFR3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00803228
GTEX-PLZ4-0006-SM-2S1NY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K42918627_GSK-2126458_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K73395020_ARP 101_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A86109770_Guggulsterone_VCAP_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HOXB5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9277
BRD-K68174511_torin-2_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-T5JW-1126-SM-4DM5V	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.831111
BRD-K49865102_PD-0325901_A375_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K63716942	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.80641
HOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.4014
EXO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0101719
2-phenylmelatonin	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.34704
Adipocyte	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.09974
BRD-K56411643_-666_SW620_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
COLO 679	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.91419
BRD-K69031148	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.02682
SIPA1L2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0062445
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32108
SNUPN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00914211
BRD-K26664453_-666_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SI	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00847482
SISO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-UPIC-0226-SM-3GADO	GTEx Tissue Sample Gene Expression Profiles	1.0	1.25429
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53796
BRD-K88573743_A443654_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K12184916_NVP-BEZ235_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HOXB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.098
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5037
STRIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60049
GSE70935_2_v_4_cyfip1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
F2R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01995
TCEAL7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51415
GTEX-SJXC-0726-SM-2XCFJ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.1306
MDA-MB-453 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.808
GSE190316,GSE190324_1_v_11_rbm4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-RVPV-1226-SM-2TF73	GTEx Tissue Sample Gene Expression Profiles	1.0	1.12924
TNFRSF4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0114258
NDUFB8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.42489
GTEX-S7PM-0626-SM-4AD4Q	GTEx Tissue Sample Gene Expression Profiles	1.0	2.26968
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5128
BRD-K74402642_Chemistry 2804_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
CBX8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33491
KRT12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00827357
GTEX-XLM4-0011-R10A-SM-4AT5P	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.03673
MRPS21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69254
496100579_HIP_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.62248
GTEX-U3ZG-0006-SM-47JWX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.35664
BRD-A19500257_geldanamycin_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-S341-0226-SM-2XCAX	GTEx Tissue Sample Gene Expression Profiles	1.0	1.42145
TSG101	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08244
LPAR5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00723758
BRD-K82638914	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.14364
TAGLN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64263
BRD-K64665523	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.1367
BRD-K46056750_AZD-7762_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
WDR81	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.74198
GSE199543,GSE239447_0_v_4_ezh2_human	RummaGEO Gene Perturbation Signatures	1.0	null
GLCCI1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58724
BRD-K42918627_GSK-2126458_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE192870_2_v_0_palbociclib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K52075715_OXIBENDAZOLE_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-WH7G-0526-SM-3NMBI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.04976
BRD-K42918627_GSK-2126458_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TSSK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36081
GTEX-REY6-0426-SM-2TF5G	GTEx Tissue Sample Gene Expression Profiles	1.0	1.14888
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7403
GTEX-R55D-0126-SM-48FEL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.85289
GTEX-X4XX-0005-SM-3NMCS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.912642
GSE196962_4_v_3_parg_human	RummaGEO Gene Perturbation Signatures	1.0	null
PMC11772884-41421_2024_747_MOESM6_ESM.xlsx-8_DEGs_RUNX1-OE_vs_control-Gene_Symbol_RUNX1	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K37720887_S8822_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
POLR1C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00602364
BRD-K49328571_dasatinib_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CCL22	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00552675
BRD-K94012289_OSI-027_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K75845970	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17235
GTEX-T6MN-0011-R1A-SM-32QOY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.17285
GTEX-X15G-0526-SM-3NMB7	GTEx Tissue Sample Gene Expression Profiles	1.0	1.22616
GTEX-OOBJ-0006-SM-2I3F4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.03232
PLEKHM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00673327
BRD-K31122616	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14938
HOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9092
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60518
DRD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00646633
GTEX-PWCY-2326-SM-2I3EQ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.87613
OLFM4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00570187
BRD-K19220233_JNK-9L_PC3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K08109215_I-BET_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-T5JW-1226-SM-3GACY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.948589
MUC3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88505
cell part	GO Cellular Component Annotations 2015	1.0	null
HOXC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1353
BRD-K49328571_dasatinib_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE221327_5_v_9_clpp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
CADM3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00649645
ADCY7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32875
BRD-K45498945	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.92213
BRD-K28351377	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.44869
GTEX-Q2AI-0826-SM-48TZO	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.22029
GSE145249_0_v_2_ppm1g_human	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K11504463	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.2418
OSMR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00542084
ACC3	BioGPS Cell Line Gene Expression Profiles	1.0	0.92728
BRD-K36099605	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.26589
BRD-K68174511_torin-2_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K32854540	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43072
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0746
BRD-A90451247_KU-60019_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ATP6V0A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52663
RFK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00501081
TGFB1I1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00597183
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1593
MIS12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57969
TSEN54	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29179
organelle organization	GO Biological Process Annotations 2023	1.0	null
BRD-K74148702_curcumin_RKO_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K59317601_INK-128_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FUT8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00734445
OSBPL1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76485
RARB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.9123
BRD-K15939043	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.12158
UBA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95242
TMEM222	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56161
Patent ductus arteriosus	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.087
BRD-K02708799_GSK-1059615_BT20_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CDK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00678843
BRD-K37687095_AZD-8330_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NOP10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00737414
PANX2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00737
KYSE-180	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K68174511_torin-2_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K78965436	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.43832
GSE102505_5_v_3_tunicamycin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DAAM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87991
BRD-K69932463_AZD-8055_LNCAP_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GJA5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00542685
VEGFC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00726641
GTEX-PLZ4-1226-SM-2I5FE	GTEx Tissue Sample Gene Expression Profiles	1.0	1.33892
H4C5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.31711
BRD-K87909389_alvocidib_BT20_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-SIU7-1826-SM-2XCE2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GTEX-XBEW-0126-SM-4AT66	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08663
NANOG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00619681
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3099
MXI1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.24138
MFE-319	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CASP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00457283
LMX1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.1568
P2RY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53552
KRT8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40015
PMC8444148-NIHMS1529754-supplement-1529754_Tab_S2.xlsx-downregulated_in_ATF4OE-RNA-seq_of_C3_ATF4_OE_and_C3_neurons_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
CCNA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00657148
ADAMTSL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.8055
BRD-K69505608	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20528
Kabuki syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.203
GSE193351_4_v_9_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GTEX-T5JC-0326-SM-4DM5C	GTEx Tissue Sample Gene Expression Profiles	1.0	1.35774
MLLT10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75645
PHF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83291
METTL21C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65522
BRD-K08109215_I-BET_HA1E_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RAB3D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.43274
NPHP4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00764629
SDE2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8462
GTEX-XBED-2026-SM-4AT5D	GTEx Tissue Sample Gene Expression Profiles	1.0	1.6531
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19152
GSE135350_3_v_0_dexamethasone_human	RummaGEO Drug Perturbation Signatures	1.0	null
BRD-K49328571_dasatinib_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GPR17	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00623053
PRPF40A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1541
DIMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.88683
GTEX-WEY5-0006-SM-3GIKG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
CRIP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00586408
BRD-K68174511_torin-2_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SLC39A7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03733
BRD-K15592317_CP466722_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A45498368_WYE-125132_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K82731415_-666_A549_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
WIPF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32718
BRD-K50000283_PHA-767491_MCF7_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K68174511_torin-2_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TNFRSF13C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39368
BRD-K15563106_-666_PC3_24.0_h_177.6_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HUWE1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00579909
BRD-A45498368_WYE-125132_PC3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K49865102_PD-0325901_HT29_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59535
ADGRA2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00837086
BRD-K05104363_PD-184352_MCF10A_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CHFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35015
BRD-A20697603_598226_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
TAAR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00704405
GTEX-X4XY-1626-SM-46MVN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.31061
GTEX-V1D1-0008-SM-4JBIJ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.889814
TJP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95041
ZNF679	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04173
BRD-K78867378_mw-A1-12_COV644_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
salivarygland_6c	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.957015
cytoplasm	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
BRD-K12184916_NVP-BEZ235_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BOLL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00761449
TXNDC12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00484459
duodenum_4c	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.893688
BRD-K12343256_trametinib_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LBH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77006
GTEX-NPJ8-0326-SM-2D7VV	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0326
BRD-K42918627_GSK-2126458_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CRTC3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00705907
CCDC90B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77832
BRD-K55836749	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00471
BRD-K65814004_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K13390322_AT-7519_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
REL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46616
SMG1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00903161
ETNK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00593792
WNT3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00899978
BRD-K63778487	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00368
ANG	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00491734
PAK4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00720364
SDAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28705
Thyroid	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.46865
TMEM258	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29118
ME3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0060773
ACAA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57414
BRD-K04623885_BIBR1532_SW948_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K06569345_HG-5-88-01_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-Q2AI-0008-SM-48U2H	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.922399
PRKD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00584654
HNMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.53777
NICN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0102388
BRD-K17753765	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14748
GSE185744,GSE185747_2_v_3_sox9_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SLC38A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41631
TMEM214	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8733
AGAP6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61272
GTEX-S4UY-0008-SM-3NM8H	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.959749
TCN2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00834626
APOH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00481405
METTL4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33523
RFX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9105
BRD-K50140147_NVP-TAE684_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K54332480	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.62008
BRD-U51024685_HG-6-64-01_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TCTN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11735
GB-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE195663_0_v_3_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
TK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0119104
GTEX-XUW1-0726-SM-4BOP5	GTEx Tissue Sample Gene Expression Profiles	1.0	1.10779
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877433
RGS5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00658175
thyroid	GTEx Tissue Gene Expression Profiles	1.0	1.65603
ACE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18399
OVTOKO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38546
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31311
ABCG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00581298
ATP6V1E1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07875
GTEX-X3Y1-2426-SM-3P5Z7	GTEx Tissue Sample Gene Expression Profiles	1.0	0.907751
BRD-K69840642_HDAC6 inhibitor ISOX_SW480_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K74148702_curcumin_NCIH596_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A08187463_Racecadotril_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
RRM2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00862016
496100576_HIP_dementia_TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.37367
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911733
BRD-K88573743_A443654_MCF7_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LTF	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00705596
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.2279
BRD-A94669766_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MED12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00612689
PKN2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00546553
LCLC-97TM1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GTEX-OXRP-0326-SM-33HBJ	GTEx Tissue Sample Gene Expression Profiles	1.0	1.05852
SK-MEL-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10991
ATP6V1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00738482
VAV2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50157
GTEX-OIZI-0126-SM-3NB13	GTEx Tissue Sample Gene Expression Profiles	1.0	0.982819
ZNF114	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33585
SLC45A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00391163
GTEX-T5JC-2426-SM-3NMDB	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00413
STK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0067091
SEMA3B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00853656
organelle	GO Cellular Component Annotations 2015	1.0	null
GTEX-V1D1-2126-SM-4JBH4	GTEx Tissue Sample Gene Expression Profiles	1.0	1.91398
PMC7498599-41467_2020_18508_MOESM11_ESM.xlsx-8cell_CTCF-Unnamed_3_CTCF	Rummagene Transcription Factor Associations 2026	1.0	null
GOLIM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5978
BRD-K12867552_-666_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TMEM119	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00914918
PLCD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18119
BRD-K63068307_ZSTK-474_HT29_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
liver_d	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.00875
BLVRA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00397966
GTEX-T2IS-0011-R5A-SM-32QP4	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.894264
BRD-K06743908	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.65729
LGR5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00742463
BRD-K97946004	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.73139
PPP1R10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44004
BRD-K88038091	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.89098
GSE226770_1_v_0_atrx_human	RummaGEO Gene Perturbation Signatures	-1.0	null
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76455
BRD-K64800655_PHA-793887_HS578T_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K56343971_PLX-4032_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K05104363_PD-184352_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MFSD6L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05867
GAD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00533073
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.1883
HEK 293T	BioGPS Cell Line Gene Expression Profiles	1.0	1.01299
BRD-K05104363_PD-184352_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.929464
BMP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0100718
GRAMD2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00479862
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76455
BRD-K13094524_PFI-1_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
APOBEC3G	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00673474
GTEX-T5JC-0005-SM-4DM7B	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K04409515	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.30548
IL1RAPL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00759277
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919694
AP3M2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45016
GTEX-PWN1-2426-SM-48TDD	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.895597
BRD-K63308290_NCGC00242296-02_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K37687095_AZD-8330_MCF10A_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A75409952_wortmannin_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-W5X1-0006-SM-3GIJZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GLA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04828
BRD-K18619710_Digoxigenin_HCC515_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K68270916	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29082
BRD-K28296557_Akt inhibitor IV_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SPDEF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57663
GTEX-NL4W-0011-R11A-SM-2I3DW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08283
LPAR3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0053817
skeletalmuscle_a	HPA Tissue Sample Gene Expression Profiles	-1.0	-0.966366
TRRAP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00955753
ZBTB7B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00538961
FKBP1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65219
RTL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49487
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919694
BRD-A13122391_16-HYDROXYTRIPTOLIDE_CORL23_6.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ITGB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00710454
BRD-U64521890_XMD16-144_HA1E_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LIVF001-002	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00262
PTPRH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00659517
GTEX-U3ZN-0226-SM-3DB8D	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.26291
SERPINB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0098849
RPL3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00586592
SCN3B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00431983
BRD-K68190965_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K00804254	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.37538
HACD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.56466
BRD-K02708799_GSK-1059615_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ASIC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00476528
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3727
H2AC21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.00805
BRD-K75809222	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.38716
NIPA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.30443
SCAMP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00512005
BRD-A45498368_WYE-125132_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K50140147_NVP-TAE684_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K29242326	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.5481
GTEX-P4QS-0226-SM-3NB1U	GTEx Tissue Sample Gene Expression Profiles	1.0	0.941685
IL17F	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00646749
BRD-K92794990	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.29121
RBL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47228
BRD-K31575995	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.02215
PPP1R16B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00698
BRD-K02708799_GSK-1059615_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KCNQ5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00611517
BRD-K57282030_JW-7-24-1_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DDX24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.06194
GTEX-TMMY-0526-SM-33HBC	GTEx Tissue Sample Gene Expression Profiles	1.0	0.849764
GSE185519_4_v_2_gilteritinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
SPC25	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00718864
GTEX-S7SF-0226-SM-3K2BI	GTEx Tissue Sample Gene Expression Profiles	1.0	1.09261
BRD-K64857848_XMD-885_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K74039237	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08167
KIF1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24426
BRD-K06569345_HG-5-88-01_MCF10A_3_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SCN1B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00721074
GTEX-U8T8-2326-SM-3DB96	GTEx Tissue Sample Gene Expression Profiles	1.0	0.96874
BRD-A62025033_temsirolimus [CI779]_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
HK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00527065
HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.6279
BRD-K72800151	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.04086
LRRC20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09783
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911733
Golgi cisterna membrane	GO Cellular Component Annotations 2025	1.0	null
BRD-K02921955	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45896
BRD-K20696416_NVP-AEW541_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
UBAC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00634424
GTEX-RU1J-0226-SM-2TF5Y	GTEx Tissue Sample Gene Expression Profiles	1.0	1.4321
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	1.0	1.60642
TMEM104	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00545994
Cornelia de Lange syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.209
DVL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13396
BRD-K40175214_torin-1_HT29_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K01436366_XMD-1150_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
FOXM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5293
C14orf28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37053
TULP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17944
GTEX-QV44-0826-SM-2S1RG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.31776
UXS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57629
SNAPC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.006246
ANKRD52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45422
RNF112	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00924526
BRD-K88573743_A443654_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K78866630	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.11716
BRD-K92140823	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.47962
membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
HAGH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.009361
BRD-K22485581	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17519
GSE218727_0_v_1_zkscan3_human	RummaGEO Gene Perturbation Signatures	1.0	null
GTEX-RM2N-1326-SM-48FCW	GTEx Tissue Sample Gene Expression Profiles	1.0	1.8655
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.827408
UNC13A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.96809
GTEX-S7SE-0011-R11A-SM-2XCDD	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.932861
BRD-K64642496_-666_PC3_24.0_h_40.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K28907958_-666_NOMO1_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PMM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.31839
BRD-K12502280_TG-101348_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
DLD-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.268
liver	HPA Tissue Gene Expression Profiles	-1.0	-0.942966
MAPKAPK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00382895
FAM241B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33715
MTAP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00511087
GTEX-NPJ8-2626-SM-2D7W2	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.15888
IL1R1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0053112
GTEX-Q2AH-0005-SM-33HBR	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.25824
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1092
PRKAA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00718463
doxorubicin_homo sapiens_gpl570_gse46493	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GSE206729_2_v_1_trps1_human	RummaGEO Gene Perturbation Signatures	1.0	null
CPNE2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.46492
GTEX-TML8-0526-SM-32QOQ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.852883
BRD-K03449891_foretinib_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GATA3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00480687
Golgi cis cisterna	GO Cellular Component Annotations 2025	1.0	null
BRD-A23340824	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.65614
IK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48167
GTEX-SUCS-1326-SM-4DM5T	GTEx Tissue Sample Gene Expression Profiles	1.0	1.56808
SIGMAR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00646603
BRD-K18635665	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.25042
TMEM229A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85702
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847224
WNT5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.00829
BRD-K29415052_NVP-BGT226_HCC515_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K64890080_BI-2536_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K97934318	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.31481
BRD-K53647853	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00055
BRD-K40175214_torin-1_MCF7_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
OGT	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0105548
BRD-U88459701_atorvastatin_HA1E_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K25305749	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.18993
FAM53B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36806
GTEX-PWN1-0726-SM-48TDR	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.892369
ASTE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.57093
BRD-K29415052_NVP-BGT226_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PSMD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30655
GZMA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00822272
NKX6-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2394
GTEX-Q2AG-0011-R11A-SM-2HMKZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.00359
STAG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0123537
GTEX-PWOO-0008-SM-48TDU	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GNPDA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47534
BRD-A43331270_niguldipine hydrochloride_SW620_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
ALB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0091464
endomembrane system organization	GO Biological Process Annotations 2025	1.0	null
CGN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36184
MMP20	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0050182
IFNA10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00617691
NDUFB10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40595
BMP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00672378
GTEX-OXRL-2126-SM-3NM98	GTEx Tissue Sample Gene Expression Profiles	1.0	1.95171
SLC11A2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00758845
BRD-K99198579	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.21644
PPM1F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76344
SLC8A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00599406
BRD-K20505830	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20649
PMC12696503-mmc2.xlsx-ST15_KD_RNA-seq_diff_expr-symbol_AR	Rummagene Transcription Factor Associations 2026	1.0	null
Tricuspid atresia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.656
GTEX-T8EM-0126-SM-4DM5R	GTEx Tissue Sample Gene Expression Profiles	1.0	1.63587
GSE201309_4_v_6_matrine_human	RummaGEO Drug Perturbation Signatures	1.0	null
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.0844
TRPM4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00503127
BRD-K54931539	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.07001
CD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00534006
GTEX-WH7G-1126-SM-3NMBK	GTEx Tissue Sample Gene Expression Profiles	1.0	0.957367
AGFG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6325
SLC24A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41991
CCDC158	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0080063
cytoplasmic part	GO Cellular Component Annotations 2015	1.0	null
STX11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00928276
PCID2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00764167
BRD-A47513740_calyculin A_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K81473043_-666_NOMO1_6.0_h_0.35_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NME2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00627366
KMS-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K03063480_PF-477736_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K02708799_GSK-1059615_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SMS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.008082
BRD-K79877849	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00416
URB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.061
ALK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00578749
GSE240809_0_v_1_hnrnpa2b1_human	RummaGEO Gene Perturbation Signatures	1.0	null
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
RDH13	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00507478
BRD-K90294313	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31583
BRD-K42191735_buparlisib_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K05734090	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-4.06204
GTEX-VUSG-0426-SM-3GIKD	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01449
GTEX-SNOS-0326-SM-4DM6C	GTEx Tissue Sample Gene Expression Profiles	1.0	0.938263
BRD-K83213911_PF 750_CL34_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K53414658_tivozanib_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SK-N-FI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54181
skeletalmuscle_d	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.12492
PL-21	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NDUFS5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00556743
BRD-K93747373_HG-5-113-01_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GABBR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50826
BRD-A15079084_phorbol-12-myristate-13-acetate (PMA)_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GSE205976,GSE205978_1_v_4_cep83_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PPRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65122
SETD1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00546105
ZNF774	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72773
CASKIN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.69487
GTEX-SE5C-1126-SM-4BRWZ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.856852
FAM234B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13901
BRD-A39646320_H7270_MCF7_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K49010888_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZFC3H1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77217
PRRX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00577212
BRD-K46056750_AZD-7762_HCC515_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0735
MAPKAPK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0048632
ZNF761	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.16145
IHH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00537889
SS18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.26742
MFAP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30664
Bmi-1_KD_GDS2724_102_human_DAOY medulloblastoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
GALNT12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97123
UBE2F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.62849
SCN2B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00706101
GSE201309_5_v_7_matrine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K46056750_AZD-7762_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PCCB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44838
SUZ12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00394345
BRD-K38625260_-666_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SKIL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00653787
SCUBE1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00512523
TTBK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00936182
LMAN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4452
GTEX-U8XE-0726-SM-3DB8O	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.968082
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
GTEX-PX3G-3026-SM-48TZR	GTEx Tissue Sample Gene Expression Profiles	1.0	0.996968
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.17394
PROK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00722742
BRD-K50140147_NVP-TAE684_HA1E_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TMEM52B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00723502
BRD-K03070790	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.59819
PIGR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00515862
BRD-K50351738	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.24524
IMPA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17728
ACSM2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02063
TBK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00601775
BRD-K86448296	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.83221
ctnnb1_19652203_myeloma_lof_human_gpl570_gds3578	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.665512
UBC	Pathway Commons Protein-Protein Interactions	1.0	null
BRD-K01877528_TL_HRAS26_CORL23_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K15714771	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.64777
ABCA7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00567233
CES3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37544
TSTD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5661
BRD-K60321290	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.61822
Golgi cis cisterna	COMPARTMENTS Curated Protein Localization Evidence Scores 2025	1.0	3.0
BRD-K29415052_NVP-BGT226_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NFIB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.09165
BRD-K42191735_buparlisib_SKBR3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-UPK5-1526-SM-4JBJA	GTEx Tissue Sample Gene Expression Profiles	1.0	0.980613
RORA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00760224
BRD-K12502280_TG101348_SW620_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-NL4W-0006-SM-2I3GH	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GTEX-RU1J-1926-SM-2TF6S	GTEx Tissue Sample Gene Expression Profiles	1.0	1.13347
FNTB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00791211
NDUFC2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00652685
abnormality of nervous system physiology	GWASdb SNP-Phenotype Associations	1.0	0.075789
GPR12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00545306
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01315
CCDC106	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85516
fallopiantube_5a	HPA Tissue Sample Gene Expression Profiles	1.0	0.897956
LOVO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K18958510	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.06173
NLRP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00680391
BRD-K63068307_ZSTK-474_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CHRNA6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00552249
GTEX-Q734-0526-SM-2I3EH	GTEx Tissue Sample Gene Expression Profiles	1.0	1.08523
CIP2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00856894
PNPLA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14675
BRD-K76215709	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.49127
JPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58441
GALNT2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00645438
GTEX-TMMY-1026-SM-4DXTI	GTEx Tissue Sample Gene Expression Profiles	1.0	0.971463
BRD-K65242613_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.80811
BRD-K40175214_torin-1_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SLC22A12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00535596
JURKAT	BioGPS Cell Line Gene Expression Profiles	1.0	2.00803
LRRC4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00473063
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6754
SIRPB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00552138
ADAMTS10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25943
BRD-K53903639_480743.cdx_HCT116_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NKX2-3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00583472
BRD-K20053005	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.61875
PHF10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.56336
EBF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40956
BRD-K42918627_GSK-2126458_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TOB2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00719927
BRD-K85402309_dovitinib_HEPG2_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A47598013_citalopram_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
PLEKHF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.94414
COLO 205	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919694
GSE111247_2_v_1_temozolomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SLC7A8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00994662
RWDD2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37059
BRD-K49865102_PD-0325901_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
IL36RN	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00526071
BRD-K31250130	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.1346
TARS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38344
496100562_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.59943
BRD-K40175214_torin-1_LNCAP_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
rnf2_20805357_u2os_osteosarcoma_lof_human_gpl570_gse23035	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.336027
BRD-K17349619_HLI 373_NOMO1_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-A45498368_WYE-125132_MCF7_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
MRPS31	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80658
RDH12	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00612656
BRD-K24496482_SB590885_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SMIM10L2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56625
SLAMF7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00847871
DAPK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00705762
REXO2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00811894
HAUS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77891
SLC37A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37905
RELL1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00745305
RGS9BP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00842545
MTARC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92453
BRD-K31883990	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.85987
SLC25A45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92729
C1QA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00716595
BRD-K04853698_LDN-193189_SKBR3_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-U3ZH-1526-SM-4DXV1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.59516
GTEX-SIU8-0326-SM-2XCDR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.01061
SMOX	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0066303
GSE250089_0_v_3_epcam_human	RummaGEO Gene Perturbation Signatures	1.0	null
NR2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0281
GTEX-RVPU-2226-SM-2XCAQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
SLC6A8	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0117135
BRD-K88573743_A443654_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TNIP3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00824814
BRD-K49328571_dasatinib_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A45498368_WYE-125132_HCC515_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Right atrial isomerism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.84
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
IL7R	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00805343
GATD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04696
RNF146	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71855
GTEX-RU72-0126-SM-2TF6Z	GTEx Tissue Sample Gene Expression Profiles	1.0	0.941466
PPIG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05138
BRD-A18328003_GDC-0980_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GBA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.92675
RT4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23143
BRD-K21025364_NVP-TAE226_HA1E_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K17852428	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.39337
HMGXB4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66079
REL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0054116
ZNF683	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00760659
GTEX-Q2AH-2026-SM-2S1PX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.921349
thyroid gland	HPA Tissue Gene Expression Profiles	1.0	1.41375
LYVE1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00654972
GTEX-RWS6-2126-SM-2XCAV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.923065
PTAFR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00509092
BRD-K47947160	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.17703
GTEX-QEG4-0126-SM-48TZE	GTEx Tissue Sample Gene Expression Profiles	1.0	1.60034
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04304
BRD-K88573743_A443654_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
USP48	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.54569
BRD-K41876347	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.29303
PMC10806738-mmc2.xlsx-Table_S2-Table_S2_Table_of_significantly_adjusted_p-valued_0_05_down-regulated_genes_log2FC_-1_in_MAX-R60Q_transfected_HEK293_cells_relative_to_MAX-WT_transfected_cells_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
GTEX-PW2O-0006-SM-2I3DV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K45101864	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.31057
FAM133B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71279
CREB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5039
BRD-K63068307_ZSTK-474_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RORC	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00580379
BRD-K10416099	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.88599
imatinib_homo sapiens_gpl571_gds3518	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.3812
BRD-K64890080_BI-2536_MDAMB231_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
C12orf29	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86576
PAX7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39549
BRD-K13390322_AT-7519_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-XQ8I-0626-SM-4BOPT	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.04662
IGFBP4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00510179
BRD-K52911425_GDC-0941_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-R55C-0626-SM-2TF4Q	GTEx Tissue Sample Gene Expression Profiles	1.0	1.48198
PMC11426526-ppat.1012555.s014.xlsx-DEG_DC_Jurkat_LPS_vs_DC_JK-Unnamed_5_IRF6	Rummagene Transcription Factor Associations 2026	1.0	null
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991998
GSE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02416
GSE158834_7_v_4_palm_human	RummaGEO Gene Perturbation Signatures	-1.0	null
BRD-K74148702_curcumin_SNUC4_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K17743125_belinostat_PC3_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GINM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.453
BRD-K50140147_NVP-TAE684_MDAMB231_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SYT6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38077
GSE158834_7_v_3_palmitic acid_human	RummaGEO Drug Perturbation Signatures	-1.0	null
cis-Golgi network	GO Cellular Component Annotations 2025	1.0	null
GTEX-OIZH-2126-SM-3NB1P	GTEx Tissue Sample Gene Expression Profiles	1.0	1.84318
KAT5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00681146
SLC19A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08714
decitabine_homo sapiens_gpl570_gse30985	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K42918627_GSK-2126458_PC3_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K43341506	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.2526
ISG20L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.17744
TMF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00790256
BRD-A45498368_WYE-125132_A549_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SKIL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.44809
BRD-K52911425_GDC-0941_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K04706894	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.97044
S100P	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00504403
ANAPC11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15227
DXO	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0094496
BRD-K09261379	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13365
BORA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18876
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0746
BRD-K83972459_JWE-035_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-X4XY-0626-SM-4E3IN	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GSE135350_3_v_7_dexamethasone_human	RummaGEO Drug Perturbation Signatures	1.0	null
ELP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.69778
BRD-K03670461_-666_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MYL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57727
SLC13A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00599159
FAM120AOS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24884
BRD-K93747373_HG-5-113-01_HS578T_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GRIN2A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00584363
GTEX-U3ZN-0326-SM-3DB86	GTEx Tissue Sample Gene Expression Profiles	1.0	0.889106
MAP2K1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.38778
BRD-K27680690	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.43337
GRIK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00590981
APBB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75134
WNT7A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00914664
BRD-A45498368_WYE-125132_HCC515_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K59507567	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.09473
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8069
BRD-K85722065	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.01756
PMC7029036-41598_2020_59469_MOESM2_ESM.xlsx-NR4A1_and_DHE_p_0_05_1_5FC-Gene_NR4A1	Rummagene Transcription Factor Associations 2026	1.0	null
CADM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00725895
KLK7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77323
SNU-449	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ABCA9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0087036
TLR5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00459592
LBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5633
MTMR11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.73603
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14457
GTEX-P4QT-1826-SM-2S1NJ	GTEx Tissue Sample Gene Expression Profiles	1.0	0.900623
RPS15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40092
PMC11024925-mmc3.xlsx-Gene_lists-MV411_FOS_ChIP_and_RNA_overlap_after_10_nM_Gilteritinib_FOS	Rummagene Transcription Factor Associations 2026	1.0	null
spindle assembly	GO Biological Process Annotations 2023	1.0	null
GTEX-QLQW-1326-SM-2S1QS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.944438
GTEX-X585-0002-SM-46MVA	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.899958
BRD-K91796483	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.14505
GR-ST	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K72636697_QL-X-138_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TMEM243	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69898
GTEX-S95S-1426-SM-2XCDM	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.22851
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0746
NSDHL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00369104
RYK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0102489
BRD-K31834149	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.83284
USP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46899
GINS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83189
APOA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81109
ECE2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00620052
B3GNT5	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00891535
BRD-K16478699_PLX-4720_A375_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SPAG4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46281
BRD-K81142122_STK249718_A549_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K98189856	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.99541
CYP1A1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00630014
HNRNPDL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11452
DLL4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00797292
BRD-K33818169_GW 3965 hydrochloride_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09847
AATK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00836125
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.9222
SEC13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22397
NME4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00557289
GTEX-X5EB-2026-SM-4E3KA	GTEx Tissue Sample Gene Expression Profiles	1.0	2.2262
CCT6A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.29895
LYRM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59958
CRYBB1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0071312
E2F1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00669696
ZW10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.23988
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.828554
BRD-K17536501	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.17391
BRD-K93819193	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.14266
FAM169A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18502
TPM4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0062801
MASP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77132
CCNYL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.34759
SIRPA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00885189
GTEX-Q2AI-0006-SM-2I3FG	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.941269
AURKA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00604579
BRD-K43002773_GDC-0068_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TTYH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31623
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14457
BRD-K16730910_regorafenib_HEPG2_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HLA-A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00815141
BRD-K47366416	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0005
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7023
BRD-K98695520	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.37395
BRD-K00337317_NU-7441_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
WDR89	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08218
TASOR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44998
FCN3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00705194
NF2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0104301
BRD-K95359959	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.00514
GSE148200_4_v_2_gemcitabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K50066702	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.27105
BRD-K23286105	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.2844
BRD-K12184916_NVP-BEZ235_HCC515_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ARFGEF1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0125165
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.827408
RFX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.956
BRD-A85860691_chaetocin_HCC515_24.0_h_0.08_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K63909265	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.08759
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.2662
BRD-K13566078_HY-10518_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
NIM1K	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00470427
AAMP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84187
Leukemia, Chronic T-Cell_T lymphocyte_GSE5788	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.60563
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42811
GTEX-VUSG-0526-SM-4KL22	GTEx Tissue Sample Gene Expression Profiles	1.0	1.13816
BRD-K40228963	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51498
SOX30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92922
BRD-K22437400	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.80216
FBXO31	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.36319
BRD-K76706127	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.35059
BRD-K53414658_-666_SNGM_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K02708799_GSK-1059615_LNCAP_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43547
Primary ciliary dyskinesia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.068
PPP5C	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00500037
ASIC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07602
ZNF470	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.44205
BRD-A21524347	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.05655
GSE161170,GSE161268_1_v_3_med1_human	RummaGEO Gene Perturbation Signatures	1.0	null
SDHB	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00518571
BRD-K03902845	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.0799
SDS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00649793
AK2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00548883
ENTPD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00676242
GTEX-NL3G-0008-SM-4E3JX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.844792
GSE158834_10_v_6_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4715
SPG7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00520815
C2orf68	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9282
testis_7f	HPA Tissue Sample Gene Expression Profiles	1.0	1.42265
skbr3	HPA Cell Line Gene Expression Profiles	-1.0	-1.28527
SHSYSY-RA	BioGPS Cell Line Gene Expression Profiles	1.0	0.860766
TestisIntersitial	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.994152
BRD-K81418486_vorinostat_AGS_6.0_h_11.1_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-WOFL-0006-SM-3TW8K	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GPX7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0106055
PHF14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09595
GTEX-QEG4-0226-SM-2S1PY	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GTEX-R53T-0005-SM-3GADK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.901159
BRD-K36944891	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.51632
GTEX-P4PP-3026-SM-3P61O	GTEx Tissue Sample Gene Expression Profiles	1.0	1.0315
BRD-K02822062_CT-200783_EFO27_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K24930745	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.51458
PMC7498599-41467_2020_18508_MOESM11_ESM.xlsx-8cell_CTCF-Unnamed_2_CTCF	Rummagene Transcription Factor Associations 2026	1.0	null
BRD-K07383982	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.45944
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76455
BRD-K49865102_PD-0325901_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ICAM3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00330794
GTEX-XV7Q-0526-SM-4BRWR	GTEx Tissue Sample Gene Expression Profiles	1.0	1.06902
GTEX-WXYG-2526-SM-3NB3F	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.08373
ATP5F1E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48916
BRD-K77591784	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.08604
BRD-K72636697_QL-X-138_MCF10A_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K25517783	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.05228
GSE196962_2_v_6_parg_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SmoothMuscle	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.29986
GSE150049_2_v_0_dexamethasone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SMYD3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00451658
IGSF10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00563448
BRD-K24496482_SB590885_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZNF605	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27688
dexamethasone_homo sapiens_gpl3921_gse28896	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZBTB16	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00760449
GTEX-SE5C-0726-SM-4BRWY	GTEx Tissue Sample Gene Expression Profiles	1.0	0.87246
NCI-H2722	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4347
Adrenalgland	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.886591
RORB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0671
UBA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3408
BRD-A46747628_-666_MCF7_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
GTEX-PWO3-0005-SM-2I5FS	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.05496
BRD-A79768653_sirolimus_A549_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
OTX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51177
ATP2B1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00702409
GTEX-QMR6-0011-R1A-SM-32PKW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K04785821	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.16145
GLO1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0080695
BRD-K14875480	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.13261
GTEX-R55G-0006-SM-2TC6O	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
rosiglitazone_homo sapiens_gpl570_gds2453	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A17902629	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01999
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.9916
UBE2L3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00658928
GTEX-NL3H-0006-SM-2I3FW	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GTEX-SE5C-1226-SM-4BRWV	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.10112
SCNM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.0065894
C19orf53	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50049
BRD-K26304855_-666_HCC515_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K53903639_480743.cdx_NCIH1836_6.0_h_80.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LRRC40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5137
GTEX-S95S-0008-SM-4AT5M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.35062
GLO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89491
BRD-K95196255_-666_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ANO8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.7162
seizures	GWASdb SNP-Phenotype Associations	1.0	0.982743
BRD-K88573743_A443654_LNCAP_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-WEY5-0001-SM-3P61Z	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.25046
BRD-K29395450_PIK-93_MCF7_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-WWYW-0011-R10A-SM-3NB35	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.942108
BRD-K67578145_GDC-0879_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K07486034	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	4.00959
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32108
ZNF529	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3817
GTEX-N7MT-0126-SM-2D7VT	GTEx Tissue Sample Gene Expression Profiles	1.0	1.22925
PMC12055596-41375_2025_2570_MOESM4_ESM.xlsx-PDX1-Unnamed_14_PDX1	Rummagene Transcription Factor Associations 2026	1.0	null
SW1573	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SLC25A35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.68987
KLF13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.4237
496100480_HIP_no dementia_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.23376
GSE246567_0_v_1_acat2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
YBEY	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6745
KAT5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04612
NME6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00812153
GTEX-O5YV-0626-SM-3LK64	GTEx Tissue Sample Gene Expression Profiles	1.0	0.837346
GCKR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0077211
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2106
FOXP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.90057
BronchialEpithelialCells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.19333
BRD-A45498368_WYE-125132_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
thyroid_5c	HPA Tissue Sample Gene Expression Profiles	1.0	0.926537
BRD-K12184916_NVP-BEZ235_HS578T_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
RCC10RGB	COSMIC Cell Line Gene Mutation Profiles	1.0	null
BRD-K97540907	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.14955
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.1776
SERPING1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00650783
GTEX-T5JW-0005-SM-3GADE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.12507
PPP1R37	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60803
CTTNBP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00700982
KP4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911733
BRD-K06750613_-666_PC3_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K54997624_BYL719_HT29_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LK-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NREP	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00671203
ZNF410	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.14693
PSMA1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0122788
GTEX-WYVS-0326-SM-3NM9V	GTEx Tissue Sample Gene Expression Profiles	1.0	1.19049
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04304
CAPN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78561
GTEX-XMK1-2026-SM-4B65K	GTEx Tissue Sample Gene Expression Profiles	1.0	1.90971
PLA2G6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00721738
AMPD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00602589
MAPK11	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00560603
AGO3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.046
DCTD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89637
CDC25B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71516
PDE3B	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00471305
SGK3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00583453
BRD-K18346873	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.01745
GSE138841_0_v_1_trim6_human	RummaGEO Gene Perturbation Signatures	1.0	null
POU4F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	103.986
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3401
HNF4A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0051019
XIRP1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00473778
GTEX-S4Z8-0626-SM-4AD6J	GTEx Tissue Sample Gene Expression Profiles	1.0	1.00069
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.4332
GTEX-Q734-2226-SM-3GAD9	GTEx Tissue Sample Gene Expression Profiles	1.0	0.857541
BRD-K11267252_CH5424802_HT29_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K01991250	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.44834
BRD-K38477985_Malonoben_PC3_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-A45498368_WYE-125132_HA1E_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-XXEK-1126-SM-4BRUX	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.0664
CYP4F2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00474973
GSE224294_4_v_2_ngly1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3579
BRD-A68061604_-666_HEPG2_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-XUW1-1326-SM-4BOO1	GTEx Tissue Sample Gene Expression Profiles	1.0	0.879072
Golgi cisterna	GO Cellular Component Annotations 2025	1.0	null
GSE210662_2_v_1_znf165_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GTEX-UPJH-0326-SM-3GADU	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.09985
KDM5D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33294
ASPH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01742
TMK-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H2AL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28258
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.029313
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.766
LIMK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00441297
BRD-A06352508_SB 218078_ASC_24.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Golgi cisterna	GO Cellular Component Annotations 2023	1.0	null
BRD-K08109215_I-BET_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K75252192	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.20592
SLC43A3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00699878
BRD-K42918627_GSK-2126458_LNCAP_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
testis_7e	HPA Tissue Sample Gene Expression Profiles	1.0	1.46611
GTEX-S3XE-1526-SM-4AD5A	GTEx Tissue Sample Gene Expression Profiles	1.0	1.83488
golgi apparatus	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
TSPYL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42604
BRD-K37687095_AZD-8330_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K46056750_AZD-7762_A549_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K74148702_curcumin_SNGM_6.0_h_48.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
EPOR	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00700346
HDAC6	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00351069
RGS14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93031
PHF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.65157
GPX3	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00571886
HLA-DMA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00578217
Golgi organization	GO Biological Process Annotations 2023	1.0	null
BRD-K35723520_darinaparsin_SW620_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
duodenum_4b	HPA Tissue Sample Gene Expression Profiles	-1.0	-1.80498
BRD-U60236422_WH-4-025_MCF10A_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NIPBL	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0125239
BRD-K42918627_GSK-2126458_HT29_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CCRL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00917411
IFITM1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00669003
GTEX-P4QT-1626-SM-2S1NP	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GTEX-RM2N-0008-SM-48FF3	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
FABP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01692
CBS	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00492533
FAAP24	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00847058
AFDN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.46391
BAZ1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55682
ICE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48102
BRD-K88573743_A443654_HT29_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K42918627_GSK-2126458_LNCAP_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HSD11B1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00463
BBOX1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00478133
BRD-K05104363_PD-184352_A375_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KRR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00589385
GSE171572_1_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	-1.0	null
CLDN1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00499491
GTEX-VJWN-0005-SM-3GIKF	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
HIF1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00524146
GTEX-PW2O-0426-SM-48TCC	GTEx Tissue Sample Gene Expression Profiles	1.0	1.06068
GRIK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00682955
LAIR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00705209
GTEX-UJMC-0008-SM-4IHKK	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.40097
BRD-K62102480	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.06465
GTEX-QVUS-0006-SM-3GAE8	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
BRD-K08799216_pelitinib_SKBR3_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
SDHA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00748542
CYBA	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00913166
BRD-K18573205	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.89892
BRD-K44426506	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.00631
STX12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.71861
TARBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.67707
GTEX-S95S-1126-SM-4B64E	GTEx Tissue Sample Gene Expression Profiles	1.0	1.79064
H2BC13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55219
JHOS-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Golgin subfamily A	InterPro Predicted Protein Domain Annotations	1.0	null
BRD-K34720817	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.53259
ZNRD2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00501438
imatinib_homo sapiens_gpl96_gds3048	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
CACUL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4523
BRD-K99545815_PF-562271_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NPBWR1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.008472
PER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.38375
TMEM33	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00781389
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.85092
NR4A2::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7743
GTEX-P4PP-1726-SM-2S1NS	GTEx Tissue Sample Gene Expression Profiles	1.0	1.44302
TMED1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.6597
EN2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0883
GTEX-QVJO-0006-SM-2S1RC	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
AURKAIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.83564
GTEX-X4XX-0011-R4B-SM-46MWL	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
LY86	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00812845
RNASE2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00568151
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.911733
GSE186471_1_v_0_carnosol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BRD-K39580048_arg-a1-2 BRD-K39580048_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K79090631_CGP-60474_HA1E_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K41895714_AS-605240_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BHLHE40	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00485167
CAL-72	COSMIC Cell Line Gene Mutation Profiles	1.0	null
DPEP2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00628061
RNF215	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90538
BRD-K78659596_MLN2238_U937_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
BRD-K16478699_PLX-4720_A375_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K87909389_alvocidib_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BBS10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63317
GTEX-T2YK-0008-SM-4DM6M	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.875268
15q13 3 copy number variation syndrome	WikiPathways Pathways 2024	1.0	null
SPATA4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00681526
GTEX-S3XE-0006-SM-3K2AA	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.07932
PRKAG2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00609823
DPYD	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00632412
15q11q13 copy number variation	WikiPathways Pathways 2024	1.0	null
USP28	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0112447
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5789
GTEX-QEL4-0326-SM-3GAE5	GTEx Tissue Sample Gene Expression Profiles	1.0	0.874273
GSE202825_2_v_1_ano1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE158834_10_v_9_palm_human	RummaGEO Gene Perturbation Signatures	1.0	null
BRD-K93788137_PF-431396_HEPG2_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K62935726	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.03445
CD55	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0042651
intracellular membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.051315
CREB3L4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9743
TCF25	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.0058366
KCNK10	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00798017
GTEX-U3ZM-1626-SM-4DXSK	GTEx Tissue Sample Gene Expression Profiles	1.0	1.76061
GTEX-QDT8-0326-SM-32PL1	GTEx Tissue Sample Gene Expression Profiles	1.0	0.874743
BRD-K56024344	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.13445
GTEX-XGQ4-2026-SM-4AT6G	GTEx Tissue Sample Gene Expression Profiles	1.0	1.92919
GTEX-WFG8-1926-SM-4LVM1	GTEx Tissue Sample Gene Expression Profiles	1.0	1.67187
UBA7	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00694369
496100621_TCx_probable Alzheimer's disease_no TBI_86_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.15988
GSE158834_7_v_13_palmitic acid_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GTEX-SNMC-0006-SM-2XCFE	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
LENG8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4806
BRD-K56343971_vemurafenib_A375_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K53281329_SYK-inhibitor_A549_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ZFP36L1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00867189
GTEX-SN8G-0526-SM-32PLE	GTEx Tissue Sample Gene Expression Profiles	1.0	0.969267
BRD-K07035171	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.58854
DUXB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01531
UHMK1	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00608783
GTEX-RVPV-0011-R11A-SM-2TF6F	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.933889
RBM42	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04213
MAGEE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26807
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4518
hacat	HPA Cell Line Gene Expression Profiles	-1.0	-1.28527
BRD-A45498368_WYE-125132_LNCAP_24_h_0.04_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K79090631_CGP-60474_HCC515_24_h_10_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04304
FCSK	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00888005
Golgi cis cisterna	GO Cellular Component Annotations 2023	1.0	null
SH3GL2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00576274
BRD-K68174511_torin-2_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K96510191	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.82018
BRD-A64915300	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.54233
BRD-K88573743_A443654_PC3_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H2BC21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.77795
Epilepsy	HuGE Navigator Gene-Phenotype Associations	1.0	null
SETD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.16358
BRD-A55484088_BNTX maleate_HA1E_6.0_h_10.0_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7445
GTEX-P4PP-1826-SM-2S1NT	GTEx Tissue Sample Gene Expression Profiles	1.0	1.17751
ZNF564	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77735
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.847224
ETS2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00867652
PTHLH	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00797401
KLHL24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40915
GTEX-TMMY-0926-SM-33HBG	GTEx Tissue Sample Gene Expression Profiles	1.0	1.22059
GTEX-Q2AG-2826-SM-2HMJQ	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.900719
BRD-K02708799_GSK-1059615_SKBR3_3_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRD-K46056750_AZD-7762_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-U8XE-0126-SM-4E3I3	GTEx Tissue Sample Gene Expression Profiles	1.0	2.49176
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1058
SELENON	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60743
BRD-K15924535	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	-1.0	-3.20261
GTEX-SUCS-0726-SM-4DM7J	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.914249
TAS1R2	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00422717
GTEX-XBEW-0006-SM-4AT4E	GTEx Tissue Sample Gene Expression Profiles	-1.0	-0.837708
ANKRD28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31679
GTEX-V955-0426-SM-3GAEL	GTEx Tissue Sample Gene Expression Profiles	1.0	1.03578
GTEX-T5JC-0826-SM-32PMC	GTEx Tissue Sample Gene Expression Profiles	1.0	0.828671
PPP6R3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28427
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.85652
GSE176008_7_v_3_azacitidine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CHD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00674963
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	76.2392
CEBPB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.72633
BRD-K43389698_BMS-387032_HT29_24_h_0.37_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TEAD4	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00809862
SLC26A9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00541898
GTEX-PX3G-0426-SM-48U1C	GTEx Tissue Sample Gene Expression Profiles	1.0	1.37381
GP9	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	1.0	0.00564154
BRD-A18328003_GDC-0980_A549_24_h_3.33_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
GTEX-X62O-0008-SM-46MU5	GTEx Tissue Sample Gene Expression Profiles	-1.0	-1.76847
GSE158834_7_v_13_palm_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SF3A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00917
MAP1A	LINCS L1000 CMAP CRISPR Knockout Consensus Signatures	-1.0	-0.00474278
BRD-K12909905	LINCS L1000 CMAP Chemical Perturbation Consensus Signatures	1.0	3.62991
BRD-K29415052_NVP-BGT226_HT29_24_h_0.12_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
496100505_TCx_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.06909
DERL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0726
BRD-K64890080_BI-2536_HCC515_24_h_1.11_um	LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null