association dataset threshold value standardized value inner SZ in ventromedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01155 ZNF384_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null periventricular stratum of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72769 medial preoptic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.05253 H3K4me1_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null LTBR_INHIBITION - 27 Day_GDS2004_736_mouse_Lymph nodes (MG-430A) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null regulation of cell differentiation GO Biological Process Annotations 2015 1.0 null regulation of developmental process GO Biological Process Annotations 2015 1.0 null Magnocellular reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.36911 Cortical amygdalar area, posterior part, medial zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.22772 cerebellar cortex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.921935 COV362 CCLE Cell Line Gene Expression Profiles 1.0 1.55663 JUN ENCODE Transcription Factor Targets 1.0 null Lung adenocarcinoma_LUAD_TCGA-05-4415-01A-22R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 928 MEL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31417 posteromedial visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.88598 quickly GeneRIF Biological Term Annotations 1.0 null central nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null seed TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.071471 anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.04326 Anterior olfactory nucleus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.17174 ZNF263_HEK293_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC2218 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.09352 AOB, mitral cell layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05168 Nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41077 NCIH2171 Achilles Cell Line Gene Essentiality Profiles 1.0 1.7153 primary somatosensory cortex (area S1, areas 3,1,2)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11273 Uterine Carcinosarcoma_UCS_TCGA-N8-A56S-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null JUN JASPAR Predicted Transcription Factor Targets 1.0 null HCC1171 CCLE Cell Line Gene Expression Profiles -1.0 -2.48309 Sarcoma_SARC_TCGA-PC-A5DP-01A-11R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null tamoxifen_mus musculus_gpl7202_gse29715 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Posterior parietal association areas, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29354 Pheochromocytoma and Paraganglioma_PCPG_TCGA-SR-A6MS-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null P3HR1 CCLE Cell Line Gene Expression Profiles 1.0 1.55374 female reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.540981 FOXP1_01_209 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 3.38127 r8 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25927 hippocampus (hippocampal formation)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.898508 spindle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.433012 r6 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13604 periventricular stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.40513 Brain Lower Grade Glioma_LGG_TCGA-DU-8158-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Posterior parietal association areas, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.79163 periventricular stratum of r10Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.78355 occur GeneRIF Biological Term Annotations 1.0 null Perturb_15744_KO_Cyp4v3_SRP358013 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -3.4489 Entorhinal area, medial part, dorsal zone, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2237 macromolecular complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 H3K4me1_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null intermediate stratum of THyB-I Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25603 BECKER COSMIC Cell Line Gene Mutation Profiles 1.0 null intracellular non-membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.439333 Lateral visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.16977 NCI-H2122 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03342 r10 part of dorsal parvicellular reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19314 Accessory olfactory bulb, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.18298 VZ in thalamic region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.08676 VZ in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.23315 Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A67X-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JF-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null layer 3 of ERCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.029 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5000-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GFI1B ChEA Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5703-11A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BHLHE40 ENCODE Transcription Factor Targets 1.0 null dorsolateral prefrontal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.14115 macromolecular complex binding GO Molecular Function Annotations 2015 1.0 null posteromedial visual area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.24788 organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 ETS1 ENCODE Transcription Factor Targets 1.0 null SIN3A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC461 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.39889 superficial stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00617 Acute Myeloid Leukemia_LAML_TCGA-AB-2927-03A-01T-0740-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FGFR3_knockdown_174_GSE41035 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.90509 CCK-81 COSMIC Cell Line Gene Mutation Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-71-6725-01A-11R-1858-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BDCA4+_DentriticCells BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.43624 chromosomal part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.654741 BRG1_DEPLETION_GDS2156_720_mouse_Embryos (maternally depleted) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null dexamethasone_homo sapiens_gpl4133_gse42619 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null H3K4me1_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null r10 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.89485 SUM149PT Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.537111 PAX3_Knock-in_GDS3331_598_mouse_Palatal shelves (E14.5 embryos - palate) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Entorhinal area, lateral part, layer 2a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03674 MYC_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Tcof1_KD_GDS998_155_mouse_neuroblastoma N1E-115 cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null ovarian disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.86018 PANC0813 Achilles Cell Line Gene Essentiality Profiles 1.0 1.19804 dorsolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.838278 bone marrow HPA Tissue Protein Expression Profiles 1.0 1.87282 DB CCLE Cell Line Gene CNV Profiles -1.0 -1.70143 SUPT11 CCLE Cell Line Gene Expression Profiles -1.0 -1.73266 AOB, internal plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.26502 HCC1395 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.758322 Neoplasms CTD Gene-Disease Associations 1.0 1.08407 Primary somatosensory area, barrel field, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09136 NCI-H510A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.50808 MYOG ENCODE Transcription Factor Targets 1.0 null Periventricular hypothalamic nucleus, posterior part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.77027 epigenetic regulation of gene expression GO Biological Process Annotations 2023 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6941-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventricular (matrix) zone of pons Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.07754 root tip TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.152806 GATA1_G1E-ER4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RAD21 ENCODE Transcription Factor Targets 1.0 null retroparafascicular area of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.17279 HCC1534 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.3195 whole body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.539793 LU-139 COSMIC Cell Line Gene Mutation Profiles 1.0 null trophectoderm TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.473869 Perturb_4616_KD_Rfx1_SRP231452 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 12.1991 H3K4me3_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null regulation of stem cell differentiation GO Biological Process Annotations 2015 1.0 null central nucleus of the inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06818 CP67-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null KDM4A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null A2058 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.8626 HCC1806 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.905013 r7 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.31199 Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19A-06A-21R-A18U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null laterodorsal subdivision of area 8 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.81844 SKN DepMap CRISPR Gene Dependency 1.0 2.8484 hippocampus (hippocampal formation)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.29991 501A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.881188 posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.85741 MXI1 ENCODE Transcription Factor Targets 1.0 null Neuro D MotifMap Predicted Transcription Factor Targets 1.0 null ovary GTEx Tissue Gene Expression Profiles 1.0 1.69914 NCI-H1770 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03479 H3K9ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Entorhinal area, medial part, dorsal zone, layer 6 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16253 negative regulation of DNA recombination GO Biological Process Annotations 2023 1.0 null JHH7 DepMap CRISPR Gene Dependency 1.0 2.76419 appendix HPA Tissue Protein Expression Profiles -1.0 -0.774522 ventral lateral nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.836987 ZFP281-18757296-E14-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null NCI-H1693 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 regulation of DNA recombination GO Biological Process Annotations 2023 1.0 null extracellular region part GO Cellular Component Annotations 2015 1.0 null Primary somatosensory area, trunk, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27153 periventricular stratum of r2Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07875 PPARG-20887899-3T3-L1 PREADIPOCYTE CELLS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-A3UD-01A-11R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COV434 CCLE Cell Line Gene Expression Profiles 1.0 2.06077 SMC3_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intracellular membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 posteroventral (inferior) parietal cortex_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.0743 intracellular organelle part GO Cellular Component Annotations 2015 1.0 null intracellular part LOCATE Predicted Protein Localization Annotations 1.0 null intermediate stratum of AStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0832 inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.56099 Orbital area, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08072 Kidney renal papillary cell carcinoma_KIRP_TCGA-MH-A55Z-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null medial subdivision of central nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.14113 SW403 DepMap CRISPR Gene Dependency 1.0 2.23806 CHD2 ENCODE Transcription Factor Targets 1.0 null inner SZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.52831 H3K4me1_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null KDM4A ENCODE Transcription Factor Targets 1.0 null vesicle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 SNU-1040 COSMIC Cell Line Gene Mutation Profiles 1.0 null inner SZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.856782 SKMEL30 DepMap CRISPR Gene Dependency 1.0 3.07825 Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3426-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleosome binding GO Molecular Function Annotations 2023 1.0 null H3K4me1_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HCV_8week-No IFN-a_None_GSE37715 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.26477 Lung squamous cell carcinoma_LUSC_TCGA-18-3410-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU-668 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21663 external granular (germinal) layer of lower rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.622 A549 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.62229 parasolitary nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.83826 HGC27 CCLE Cell Line Gene CNV Profiles -1.0 -1.53776 extracellular vesicle GO Cellular Component Annotations 2015 1.0 null cytoplasm GO Cellular Component Annotations 2015 1.0 null Brain Lower Grade Glioma_LGG_TCGA-DU-5847-01A-11R-1708-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null organelle GO Cellular Component Annotations 2015 1.0 null HCC1599 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.00593 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7091-01A-11R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null bonemarrow BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.956178 SNU-387 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 upper limb region of M1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.27968 all GeneRIF Biological Term Annotations 1.0 null abnormality of nervous system physiology GWASdb SNP-Phenotype Associations 1.0 0.0599 nucleosome organization GO Biological Process Annotations 2015 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7PW-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-7072-01A-21R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null normal phenotype MPO Gene-Phenotype Associations 1.0 null posteroventral (inferior) parietal cortex_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.12298 H3K4me1_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null amygdalo-striatal transition Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21148 nucleosome GO Cellular Component Annotations 2015 1.0 null CiliaryGanglion BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.36886 after GeneRIF Biological Term Annotations 1.0 null HMGN3_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-SX-A7SN-01A-11R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Carcinoma, Squamous Cell CTD Gene-Disease Associations 1.0 1.03567 mediodorsal nucleus of thalamus_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.841097 anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.02576 chromatin COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.670292 intracellular organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.32195 cellular component organization or biogenesis GO Biological Process Annotations 2015 1.0 null renal artery disease GWASdb SNP-Disease Associations 1.0 0.859451 organelle LOCATE Predicted Protein Localization Annotations 1.0 null amygdaloid complex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18549 shoot tip TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.163538 IOMMLEE CCLE Cell Line Gene Expression Profiles 1.0 1.89055 Primary visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12567 r10 part of the inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.95036 organism form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.681471 head TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A3IU-01A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null extracellular membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 cerebellar cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.876355 chromosomal part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 NCIH1092 DepMap CRISPR Gene Dependency 1.0 6.63352 cuneate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.924704 KOSC-2 COSMIC Cell Line Gene Mutation Profiles 1.0 null NCIH69 CCLE Cell Line Gene CNV Profiles -1.0 -1.43798 parasubicular cortex (parasubiculum) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.917069 intracellular membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null HCC1569 COSMIC Cell Line Gene Mutation Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-RP-A693-06A-13R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null RCOR1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Anterior olfactory nucleus, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11795 COR-L47 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.02885 GATA1_G1E-ER4_mm9_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null HS751T CCLE Cell Line Gene Expression Profiles 1.0 2.20685 Accessory olfactory bulb, mitral layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.46884 RERF-GC-1B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.12281 Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H0-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OVMIU DepMap CRISPR Gene Dependency 1.0 5.32812 Brain Lower Grade Glioma_LGG_TCGA-DU-7290-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r6 part of nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18814 intermediate stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.9564 MZ in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.19063 COLO 794 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.83895 external cortical nucleus of inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.01508 protein complex subunit organization GO Biological Process Annotations 2015 1.0 null ASPC1 Achilles Cell Line Gene Essentiality Profiles 1.0 1.18855 H3K27me3_G1E_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Primary B cells from cord blood Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles -1.0 -1.09605 female reproductive gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.639214 periventricular stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72524 Gastrointestinal stromal tumor_Gastric Tissue_GSE15966 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.74791 reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.391885 animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null interpeduncular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.844291 inner SZ in midlateral extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.62349 behavioral abnormality GWASdb SNP-Phenotype Associations 1.0 0.10449 Lung adenocarcinoma_LUAD_TCGA-62-8402-01A-11R-2326-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null plumule TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.07843 nuclear lumen GO Cellular Component Annotations 2023 1.0 null orbital frontal cortex_15 yrs_M_12299 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.823958 layer 1 of AOD cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06381 r5 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.40513 liminal part of the r10 alar plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08611 H3K27ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Perturb_18605_KO_Pabpn1l_ERP127567 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 MYOG_myocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Uterine Carcinosarcoma_UCS_TCGA-NG-A4VW-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Simple lobule, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2465 Kidney renal clear cell carcinoma_KIRC_TCGA-B8-A54G-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cellular component assembly GO Biological Process Annotations 2015 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JB-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ovarian cumulus cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.478534 FGFR3_KD_GSE41035_77_human_RT112 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null primary motor cortex (area M1, area 4)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.840269 intermediate part of the arcuate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0438 pallidal amygdala Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10372 ESR1-26153859-MCF-7-HUMAN-BREASTCANCER ChEA Transcription Factor Targets 2022 1.0 null HUG1N CCLE Cell Line Gene CNV Profiles 1.0 1.90106 chromatin binding GO Molecular Function Annotations 2015 1.0 null CHAGOK1 CCLE Cell Line Gene Expression Profiles 1.0 2.06741 Entorhinal area, lateral part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.83302 caudal presubiculum (postsubiculum) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.849734 synaptonemal complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.297342 COLO800 CCLE Cell Line Gene CNV Profiles 1.0 2.76229 Orbital area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02244 cell adhesion molecules GAD Gene-Disease Associations 1.0 null ventrolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.909287 biological_process GO Biological Process Annotations 2015 1.0 null G61 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03342 posterior (caudal) superior temporal cortex (area 22c)_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.01044 H3K4me2_myocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null rhombomere 11 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08224 r10 part of vagal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.78091 NCIH2170 CCLE Cell Line Gene CNV Profiles -1.0 -1.34982 NB1 CCLE Cell Line Gene CNV Profiles -1.0 -1.99943 UOK101 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.72563 medial part of r10B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.96766 Kidney renal clear cell carcinoma_KIRC_TCGA-B8-A54I-01A-21R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-LB-A7SX-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H2170 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.50808 internal female genital organ TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.604904 Entorhinal area, lateral part, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.48145 periventricular stratum of r9Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32863 r7 part of cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.35928 Anterolateral visual area, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.82685 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5099-01A-01R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cellular_component COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.224913 NCI-H345 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.29177 RKN DepMap CRISPR Gene Dependency 1.0 2.20898 TAL1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GATA1_G1E-ER4_mm9_7 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-44-A4SS-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_NT2-D1_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A6I3-01A-11R-A31N-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cell part LOCATE Predicted Protein Localization Annotations 1.0 null negative regulation of cell differentiation GO Biological Process Annotations 2015 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FR-A7U8-06A-21R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6960-01A-41R-2016-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Mesothelioma_MESO_TCGA-TS-A7P8-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZNF263 ENCODE Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-DV-5575-01A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7062-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null protein-dna complex GO Cellular Component Annotations 2015 1.0 null COLO 680N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.39889 protein complex GO Cellular Component Annotations 2015 1.0 null regulation of gene expression GO Biological Process Annotations 2023 1.0 null regulation of nitrogen compound metabolic process GO Biological Process Annotations 2015 1.0 null stratum oriens of caudal CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.17412 lateral subdivision of BNST Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.20437 GSU CCLE Cell Line Gene CNV Profiles 1.0 1.7993 HS888T CCLE Cell Line Gene Expression Profiles -1.0 -1.71215 JHUEM3 CCLE Cell Line Gene Expression Profiles -1.0 -2.22161 MAFK_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SNU738 CCLE Cell Line Gene Expression Profiles 1.0 1.70545 Brain Lower Grade Glioma_LGG_TCGA-S9-A7R2-01A-21R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MKN45 DepMap CRISPR Gene Dependency 1.0 2.75393 HOXB13-26457646-LNCAP-HUMAN-PROSTATE-CARCINOMA ChEA Transcription Factor Targets 2022 1.0 null TAL1 ENCODE Transcription Factor Targets 1.0 null intermediate stratum of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19235 H3K4me1_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null lateral orbital frontal cortex (area 12/47) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.46664 NCIH1869 DepMap CRISPR Gene Dependency 1.0 3.23859 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4971-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null COLO818 CCLE Cell Line Gene CNV Profiles 1.0 1.62824 dorsolateral prefrontal cortex_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.05581 regulation of cellular process GO Biological Process Annotations 2015 1.0 null NRL_Deficiency_GDS2936_629_mouse_Retinas - 2 days GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null H3K4me1_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NCI-H2171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.43331 Kidney renal clear cell carcinoma_KIRC_TCGA-B8-5545-01A-01R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC2885 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.21049 stratum radiatum of rostral CA1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.838822 nucleosome COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 Lung adenocarcinoma_LUAD_TCGA-67-3774-01A-01R-0946-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intermediate stratum of r10BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21189 cell COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 Hoxc13_OE_GDS1890_174_mouse_Skin GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A8HV-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-38-4631-01A-01R-1755-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS5_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null MDAMB415 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -0.787964 DU 145 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21663 LHX8_Deficiency_GDS3254_600_mouse_Newborn ovaries GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A5FO-01A-21R-A28H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null dorsal subdivision of VLC Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.848159 membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.239916 Retrosplenial area, lateral agranular part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.392 KAT2A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null decondensation GeneRIF Biological Term Annotations 1.0 null posteroventral (inferior) parietal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.24548 Lung adenocarcinoma_LUAD_TCGA-93-8067-01A-11R-2287-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r7 part of the dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04902 MAX ENCODE Transcription Factor Targets 1.0 null Entorhinal area, medial part, dorsal zone, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.86602 HEC-1-A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.06049 H3K27ac_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null intermediate stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51054 Paraflocculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21924 mediodorsal nucleus of thalamus_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.24334 nucleolus GO Cellular Component Annotations 2015 1.0 null LBP-1 MotifMap Predicted Transcription Factor Targets 1.0 null mediodorsal nucleus of thalamus_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.2586 primary motor cortex (area M1, area 4)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.23344 Sarcoma_SARC_TCGA-QC-A6FX-01A-11R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.7695 intracellular organelle part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.414555 IZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.876353 oral mucosa HPA Tissue Protein Expression Profiles -1.0 -0.774522 very GeneRIF Biological Term Annotations 1.0 null HCC1359 CCLE Cell Line Gene Expression Profiles 1.0 2.65492 Orbital area, medial part, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.069 episupraoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3618 H3K4me1_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Sarcoma_SARC_TCGA-PT-A8TR-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXA1-27270436-VCAP-HUMAN-PROSTATE-CARCINOMA ChEA Transcription Factor Targets 2022 1.0 null NCIH196 CCLE Cell Line Gene Expression Profiles -1.0 -1.67067 oocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.52856 H3K4me1_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-38-A44F-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null regulation of macromolecule metabolic process GO Biological Process Annotations 2015 1.0 null AGS DepMap CRISPR Gene Dependency 1.0 2.12854 Breast Cancer_Mammary Gland Tissue_GSE1378 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.93779 Paraflocculus, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02529 Dorsal peduncular area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13249 meiotic spindle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.502288 Perturb_5438_KO_Kansl3_SRP225948 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 1.83742 SOX9 ChEA Transcription Factor Targets 1.0 null nuclear chromosome part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.050709 macromolecular complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.040778 extracellular vesicular exosome GO Cellular Component Annotations 2015 1.0 null Lingula (I), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.23386 amygdaloid complex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.58321 mantle zone of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.53808 urogenital system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.885438 MYOG_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FFAR4_KO_GDS4811_507_mouse_adipose GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null BFTC-905 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.21663 Intercalated amygdalar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08099 P31FUJ CCLE Cell Line Gene Expression Profiles -1.0 -1.57742 Sarcoma_SARC_TCGA-DX-A2J0-01A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null germ cell cancer cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.34371 Perturb_4619_KD_Rfx1_SRP231452 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.18805 mood disorder GWASdb SNP-Disease Associations 1.0 0.321042 organic cyclic compound binding GO Molecular Function Annotations 2015 1.0 null ETS1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null primary motor cortex (area M1, area 4)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.995761 cytoplasm COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 PPARG ChEA Transcription Factor Targets 1.0 null H3K4me3_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null C75 DepMap CRISPR Gene Dependency 1.0 5.08596 Brain Lower Grade Glioma_LGG_TCGA-HT-8110-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAFK ENCODE Transcription Factor Targets 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-A4-8311-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null non-membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null ventrolateral prefrontal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.65838 bladder GTEx Tissue Gene Expression Profiles -1.0 -1.17451 spleen HPA Tissue Protein Expression Profiles -1.0 -0.774522 Head and Neck squamous cell carcinoma_HNSC_TCGA-UF-A7JD-01A-11R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleus LOCATE Predicted Protein Localization Annotations 1.0 null Adrenocortical carcinoma_ACC_TCGA-OR-A5L4-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13604 HMCB CCLE Cell Line Gene Expression Profiles -1.0 -1.68392 HPAFII DepMap CRISPR Gene Dependency 1.0 3.27062 depression GWASdb SNP-Phenotype Associations 1.0 0.576661 Kidney Chromophobe_KICH_TCGA-KN-8426-11A-01R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POU2F1-27270436-LNCAP-HUMAN-PROSTATE-CARCINOMA ChEA Transcription Factor Targets 2022 1.0 null Primary visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2465 anteromedial nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.61086 KALS-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null HCC15 CCLE Cell Line Gene CNV Profiles -1.0 -1.5589 IGR39 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.06987 sublayer 6a of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25708 mantle zone of AStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13073 medial part of r9B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.76861 protein complex assembly GO Biological Process Annotations 2015 1.0 null localized GeneRIF Biological Term Annotations 1.0 null cardiovascular system disease GWASdb SNP-Disease Associations 1.0 0.062529 periventricular stratum of r6BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18736 Anterior olfactory nucleus, external part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.50137 OVISE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05431 nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Prenatal Exposure Delayed Effects CTD Gene-Disease Associations 1.0 1.17794 H3K27ac_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null protein-dna complex subunit organization GO Biological Process Annotations 2015 1.0 null Perturb_12556_KO_Sirt6_SRP302465 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 2.2832 extracellular organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 NEC8 COSMIC Cell Line Gene Mutation Profiles 1.0 null r7 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13778 lateral hypothalamic area, tuberal part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.953441 H3K4me1_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TrigeminalGanglion BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.922049 adrenal gland HPA Tissue Protein Expression Profiles -1.0 -0.774522 Lateral visual area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.95536 Perturb_12655_KD_Yap1/Wwtr1_SRP212072 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -20.0 MYOD1 ENCODE Transcription Factor Targets 1.0 null COV318 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.957427 EP300_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null germ TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.644479 SNU1033 DepMap CRISPR Gene Dependency 1.0 2.13067 intracellular non-membrane-bounded organelle GO Cellular Component Annotations 2023 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5989-11A-01R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null chromatin remodeling GO Biological Process Annotations 2023 1.0 null H3K4me1_lung_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null r8 part of nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.82468 superficial stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32074 nucleus GO Cellular Component Annotations 2015 1.0 null whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4992-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null protein complex binding GO Molecular Function Annotations 2015 1.0 null H3K9ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null embryo TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.550901 ML1 CCLE Cell Line Gene CNV Profiles -1.0 -1.74031 mantle zone of r10Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08643 NCI-H1651 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.94934 chromosome COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.614589 MCF10F Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.22435 nucleus COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.341529 negative regulation of biological process GO Biological Process Annotations 2015 1.0 null SNU1105 DepMap CRISPR Gene Dependency 1.0 6.50458 Orbital area, ventrolateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03909 nucleus GO Cellular Component Annotations 2023 1.0 null dna bending complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.00975 IRS1_KO_GDS1219_303_mouse_brown preadipocytes GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null medial vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.80798 cervix, uterine HPA Tissue Protein Expression Profiles -1.0 -2.55256 NB13 DepMap CRISPR Gene Dependency 1.0 5.37105 abnormality of the cardiovascular system GWASdb SNP-Phenotype Associations 1.0 0.049508 intracellular membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null intermediate part of THyB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07626 G-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null SNU-423 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 orbital frontal cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.78245 KNS81 DepMap CRISPR Gene Dependency 1.0 2.66307 MDAMB453 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 1.88246 germ cell nucleus COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 1.09238 extracellular vesicular exosome COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 meiotic cell cycle GO Biological Process Annotations 2015 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-8085-01A-11R-2241-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mantle zone of r6BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25927 biological regulation GO Biological Process Annotations 2015 1.0 null regulation of cellular metabolic process GO Biological Process Annotations 2015 1.0 null Infralimbic area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02407 Retrosplenial area, lateral agranular part, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.85568 ZNF281 ChEA Transcription Factor Targets 1.0 null Mdr2_KO_GDS1990_285_mouse_Livers of 3 month old GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null r7 part of the nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.95239 orbital frontal cortex_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.40615 VZ in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.36213 NCIH2110 CCLE Cell Line Gene Expression Profiles 1.0 1.77896 NCIH2141 CCLE Cell Line Gene CNV Profiles -1.0 -1.40982 stomach HPA Tissue Protein Expression Profiles 1.0 0.951672 anterior (rostral) cingulate (medial prefrontal) cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.12622 CORL47 DepMap CRISPR Gene Dependency 1.0 3.53159 Lateral reticular nucleus, parvicellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06621 Head and Neck squamous cell carcinoma_HNSC_TCGA-MT-A7BN-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Neoplasms CTD Gene-Disease Associations 1.0 1.23899 Lung squamous cell carcinoma_LUSC_TCGA-52-7809-01A-21R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null root TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.066677 KP2 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.04181 stem TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.061767 PK-8 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.888572 H2AFZ_endothelial cell of umbilical vein_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dna binding GO Molecular Function Annotations 2015 1.0 null CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.05784 POU2F1-35413990-HUMAN-ARNEGCRPROSTATECANCER ChEA Transcription Factor Targets 2022 1.0 null SYO1 DepMap CRISPR Gene Dependency 1.0 2.21055 U-698-M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.14522 Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-4864-11A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H2196 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.576 embryonic stem cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.416576 cervix uteri GTEx Tissue Gene Expression Profiles -1.0 -1.17451 Entorhinal area, lateral part, layer 2b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38946 EW8 Achilles Cell Line Gene Essentiality Profiles 1.0 1.58475 inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.16776 SNU16 CCLE Cell Line Gene Expression Profiles -1.0 -1.50185 Anteromedial visual area, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08563 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5885-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null DETROIT 562 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05431 POLR2AphosphoS2_K562_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.97285 697 DepMap CRISPR Gene Dependency 1.0 3.0144 primary somatosensory cortex (area S1, areas 3,1,2)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.28271 CORL23 CCLE Cell Line Gene CNV Profiles 1.0 2.74324 EJM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05431 NCIH2029 CCLE Cell Line Gene CNV Profiles -1.0 -1.5341 cell part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.249664 NCI-H716 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.39889 MYC_KD_GSE22139_685_human_medulloblastoma GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null periventricular stratum of APal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.27606 NCIH146 CCLE Cell Line Gene CNV Profiles 1.0 1.43725 LPIN1_OE_GDS2291_587_mouse_Liver GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null oocytes GeneRIF Biological Term Annotations 1.0 null NCIH2110 DepMap CRISPR Gene Dependency 1.0 4.20332 TTC709 DepMap CRISPR Gene Dependency 1.0 2.0117 Perturb_16354_KD_Nr5a2_SRP325052 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -2.74667 r7 part of the posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.88355 intermediate stratum of r6BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.27606 posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.1289 SG in rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.962041 plant form TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.34926 MECOM-23826213-KASUMI-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 CD56+_NKCells BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.45161 intracellular non-membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 oocyte BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.46785 COLO684 CCLE Cell Line Gene Expression Profiles 1.0 1.89447 intracellular part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 anterior (rostral) cingulate (medial prefrontal) cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.00385 COLO 741 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.14228 hippocampus (hippocampal formation)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.48126 assembly GeneRIF Biological Term Annotations 1.0 null H3K27me3_G1E_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-97-7553-01A-21R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary auditory cortex (core)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.16874 NIH:OVCAR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.72704 OUMS23 CCLE Cell Line Gene Expression Profiles -1.0 -1.77316 SU.86.86 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.87632 SNU449 DepMap CRISPR Gene Dependency 1.0 2.89559 amygdalostriatal transition area Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.933271 posterior (caudal) superior temporal cortex (area 22c)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.970535 cellular_component COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 dorsal raphe nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.92862 T3M4 CCLE Cell Line Gene Expression Profiles 1.0 1.35247 r6 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.23171 Pancreatic adenocarcinoma_PAAD_TCGA-Q3-A5QY-01A-12R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r10 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.72355 r3 roof plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.57498 Inferior colliculus, central nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16617 regulation of primary metabolic process GO Biological Process Annotations 2015 1.0 null cellular component organization GO Biological Process Annotations 2015 1.0 null YAPC CCLE Cell Line Gene Expression Profiles -1.0 -1.85516 superior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.972913 COR-L23 COSMIC Cell Line Gene CNV Profiles 1.0 4.51153 Liver hepatocellular carcinoma_LIHC_TCGA-DD-A39X-11A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KYSE-140 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05431 Sarcoma_SARC_TCGA-DX-A3M1-01A-11R-A22K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K27me3_G1E_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.316334 HCC70 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.927888 cerebellar cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.887673 NCIH292 CCLE Cell Line Gene Expression Profiles 1.0 1.40122 COLO 800 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.24296 fertilizedegg BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 2.09859 SKNO1 CCLE Cell Line Gene CNV Profiles -1.0 -2.17148 H3K4me1_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MAFK_HepG2_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null membrane-bounded vesicle GO Cellular Component Annotations 2015 1.0 null M-1 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -0.882253 molecular_function GO Molecular Function Annotations 2015 1.0 null OV7 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.60362 germ cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.45053 SCA7_Knock-in_GDS3545_560_mouse_Cerebellum GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5108-01A-01R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null mature ovarian follicle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.04005 CD33+_Myeloid BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.894303 disease of mental health GWASdb SNP-Disease Associations 1.0 0.046677 NCIH1648 CCLE Cell Line Gene CNV Profiles 1.0 1.38857 Anteromedial visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.71907 Anterolateral visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.93987 magnocellular (medial) division of MD Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.0264 premature ovarian failure DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 1.16307 vascular disease GWASdb SNP-Disease Associations 1.0 0.089183 blastocyst TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.863048 Central amygdalar nucleus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.30382 inner SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.959224 LS DepMap CRISPR Gene Dependency 1.0 6.97724 KYSE180 CCLE Cell Line Gene CNV Profiles 1.0 1.63945 layer 4 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.53868 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5009-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cardiovascular GAD High Level Gene-Disease Associations 1.0 0.293278 pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.00064 VZ in postamygdaloid region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.58662 dna packaging complex GO Cellular Component Annotations 2015 1.0 null Winged helix-turn-helix DNA-binding domain InterPro Predicted Protein Domain Annotations 1.0 null 721_B_lymphoblasts BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.9916 Paraflocculus, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44546 mantle zone of THyB-I Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07666 H3K4me1_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null KARPAS422 DepMap CRISPR Gene Dependency 1.0 4.25243 HEC6 CCLE Cell Line Gene Expression Profiles -1.0 -1.53693 Arsenic CTD Gene-Chemical Interactions 1.0 null Retrosplenial area, dorsal part, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.08688 primary motor cortex (area M1, area 4)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.826506 HT1197 CCLE Cell Line Gene Expression Profiles 1.0 1.40948 superficial stratum of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.13841 SNU-5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.18678 granulosa cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.939206 Cortical amygdalar area, posterior part, medial zone, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16617 Acute Myeloid Leukemia_LAML_TCGA-AB-2954-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4821-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intracellular membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.239916 Perturb_18604_KO_Zfp708_SRP186171 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -8.06664 ventrolateral prefrontal cortex_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.847434 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7UH-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null spinal trigeminal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.50601 H3K4me1_H1-hESC_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null MNAT1_Deficiency - Ablation_GDS2561_690_mouse_Heart - 4 week old GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Perturb_5354_KO_Dux_SRP201141 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 5.15565 plant TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.07272 MEC1 CCLE Cell Line Gene Expression Profiles -1.0 -1.63812 ES-I3 Cells Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles -1.0 -2.08685 r9 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.29165 KYSE-180 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.74267 Kidney Chromophobe_KICH_TCGA-KO-8405-01A-11R-2315-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cellular macromolecular complex assembly GO Biological Process Annotations 2015 1.0 null superficial stratum of OCx (cortical plate/marginal zone) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38756 occipital cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38756 16651409-SuppTable2 GeneSigDB Published Gene Signatures 1.0 null H3K4me2_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null Retrosplenial area, lateral agranular part, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.93749 female reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.557509 H3K27ac_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CPC-N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.37905 NCI-H1435 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.43114 intracellular organelle LOCATE Predicted Protein Localization Annotations 1.0 null SIN3A ENCODE Transcription Factor Targets 1.0 null OBF-1_NULL MUTATION_GDS3473_571_mouse_Bone marrow pre-BII cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null paraventricular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.922656 LN319 Achilles Cell Line Gene Essentiality Profiles -1.0 -2.13209 NCI-H522 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.38136 ZR75B Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.2279 amygdaloid complex_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.08569 H9 Cells Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 1.34988 Primary visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.50564 HCA1 DepMap CRISPR Gene Dependency 1.0 2.17232 SOX17 JASPAR Predicted Transcription Factor Targets 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-UY-A78L-01A-12R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null frontalcortex BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.25324 Cell Adhesion Molecules dbGAP Gene-Trait Associations 1.0 0.212694 MXI1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-8301-01A-11R-2287-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Entorhinal area, medial part, ventral zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.86602 hippocampus (hippocampal formation)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.15164 outer CP in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.928993 PANC0213 CCLE Cell Line Gene CNV Profiles 1.0 1.38764 Lung adenocarcinoma_LUAD_TCGA-86-A456-01A-11R-A24H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-CC-A5UC-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null regulation of nucleobase-containing compound metabolic process GO Biological Process Annotations 2015 1.0 null HARA CCLE Cell Line Gene Expression Profiles 1.0 1.52882 non-membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 MAZ_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4799-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-DX-A6BG-01A-11R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SCC-15 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.976233 Lung adenocarcinoma_LUAD_TCGA-MN-A4N5-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null rostral (anterior) extramural migratory stream Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.69482 Ovary BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.992793 NCIH1876 CCLE Cell Line Gene CNV Profiles 1.0 1.55249 Neoplasms, Experimental CTD Gene-Disease Associations 1.0 1.18456 superficial stratum of POH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35993 Sarcoma_SARC_TCGA-DX-A1L1-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posteroventral (inferior) parietal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.14938 HCC1576 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03342 Perihypoglossal nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.17093 Kidney renal papillary cell carcinoma_KIRP_TCGA-KV-A6GD-01A-11R-A31O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null HCC95 CCLE Cell Line Gene CNV Profiles -1.0 -1.49828 Mdr2_KO_GDS1990_286_mouse_Livers of 12 month old GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null HCC4011 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31223 estradiol_homo sapiens_gpl1225_gse1486 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-K7-A6G5-01A-11R-A311-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MAFK_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intracellular COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.279612 periventricular stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.74124 DNA binding GO Molecular Function Annotations 2023 1.0 null Skeletal Muscle Female Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 1.13287 SUDHL6 CCLE Cell Line Gene Expression Profiles -1.0 -1.51137 primary visual cortex (striate cortex, area V1/17)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.61167 Acute Myeloid Leukemia_LAML_TCGA-AB-2832-03A-01T-0736-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me1_G1E-ER4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NCIH3255 CCLE Cell Line Gene Expression Profiles 1.0 1.60681 NURR1 MotifMap Predicted Transcription Factor Targets 1.0 null KNS81 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.40986 H3K4me1_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null PKBalpha_KO_GDS1784_196_mouse_Embryonic fibroblasts (MEFs) - 24h GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null r9 part of nucleus of Roller Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.0457 Thyroid BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.928976 protein-dna complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 H3K4me1_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null periventricular stratum of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.35515 OUMS-23 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.44324 Bladder Urothelial Carcinoma_BLCA_TCGA-2F-A9KT-01A-11R-A38B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleosome positioning GO Biological Process Annotations 2015 1.0 null OCIAML3 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.01988 bed nucleus of stria terminalis, lateral amygdaloid division Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.27516 JHH6 CCLE Cell Line Gene CNV Profiles -1.0 -1.59265 Nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.14597 orbital frontal cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.976425 RH41 CCLE Cell Line Gene CNV Profiles -1.0 -1.69407 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-6033-01A-11R-1672-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A3A1-11A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r4 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.35464 superficial stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.88496 JUND ENCODE Transcription Factor Targets 1.0 null intermediate stratum of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.48401 Entorhinal area, medial part, ventral zone, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13674 Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A3MF-01A-12R-A21D-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCT-15 COSMIC Cell Line Gene Mutation Profiles 1.0 null disease of anatomical entity GWASdb SNP-Disease Associations 1.0 0.02789 salivary gland HPA Tissue Protein Expression Profiles -1.0 -0.774522 ZR7530 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.998113 Nucleus of the lateral olfactory tract, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.45999 layer 1 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02284 DorsalRootGanglion BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.992793 MKN45 CCLE Cell Line Gene Expression Profiles -1.0 -1.51303 SNU869 CCLE Cell Line Gene Expression Profiles 1.0 2.14262 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A63U-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r10 part of nucleus gracilis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.36828 RDES CCLE Cell Line Gene CNV Profiles -1.0 -1.46278 no abnormal phenotype detected MPO Gene-Phenotype Associations 1.0 null HCC1500 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.47806 Anterolateral visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.90538 blastomere TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.367502 r9 (gustatory) part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.32911 extracellular organelle GO Cellular Component Annotations 2015 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A4BA-01A-21R-A26T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.11246 Primary visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.47515 Uterine Carcinosarcoma_UCS_TCGA-N6-A4VE-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SOX9-25088423-EMBRYONIC GONADS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null Type 2 diabetes mellitus_Hepatic Tissue_GSE2899 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.85602 r10 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.84466 GATA1_G1E-ER4_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null EP300 ENCODE Transcription Factor Targets 1.0 null injection GeneRIF Biological Term Annotations 1.0 null blastula TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.631527 HDAC1_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null abnormality of the nervous system GWASdb SNP-Phenotype Associations 1.0 0.042851 regulation of biological process GO Biological Process Annotations 2015 1.0 null magnocellular division of VA Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.34754 Skin Cutaneous Melanoma_SKCM_TCGA-FR-A44A-06A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AP-2rep MotifMap Predicted Transcription Factor Targets 1.0 null cell property TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.558457 mediodorsal nucleus of thalamus_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.13733 Posterolateral visual area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13629 IZ in rostral cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.908645 Posterior parietal association areas Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.54865 CHLA57 DepMap CRISPR Gene Dependency 1.0 2.18107 posteroventral (inferior) parietal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.3099 HOXB4_induction_GDS3036_138_mouse_ES cell-derived embryoid bodies (EBs) GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null BHLHE40_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RI-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.14675 nucleosomal DNA binding GO Molecular Function Annotations 2023 1.0 null dorsomedial nucleus, terminal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31342 Orbital area, lateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14243 chromatin assembly GO Biological Process Annotations 2015 1.0 null KU812 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03342 primordial GeneRIF Biological Term Annotations 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-ER-A19K-01A-21R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null embryonic structure TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.775249 no abnormal phenotype detected MGI Mouse Phenotype Associations 2023 1.0 null GR MotifMap Predicted Transcription Factor Targets 1.0 null SNU840 CCLE Cell Line Gene Expression Profiles -1.0 -2.58626 HOP-92 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.46508 Lingula (I) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.24413 protein binding GO Molecular Function Annotations 2015 1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.910271 CAL-85-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03479 Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A686-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intracellular organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 intermediate stratum of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.19908 NCIH2081 CCLE Cell Line Gene CNV Profiles 1.0 1.60872 Lung squamous cell carcinoma_LUSC_TCGA-34-5929-01A-11R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Posterior parietal association areas, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25708 Simple lobule, molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3054 Lung Diseases CTD Gene-Disease Associations 1.0 1.27193 Orbital area, medial part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07824 H3K36me3_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null external part of AOV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02786 endometrium HPA Tissue Protein Expression Profiles -1.0 -2.04517 artery disease GWASdb SNP-Disease Associations 1.0 0.123976 Acute Myeloid Leukemia_LAML_TCGA-AB-2983-03A-01T-0734-13 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PANC1005 Achilles Cell Line Gene Essentiality Profiles 1.0 1.12944 KCL-22 COSMIC Cell Line Gene Mutation Profiles 1.0 null Anteromedial visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.83914 mantle zone of r10BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.37644 phenotypic abnormality GWASdb SNP-Phenotype Associations 1.0 0.03085 RCH-ACV COSMIC Cell Line Gene Mutation Profiles 1.0 null seems GeneRIF Biological Term Annotations 1.0 null UACC62 CCLE Cell Line Gene CNV Profiles 1.0 1.42468 chromatin assembly or disassembly GO Biological Process Annotations 2015 1.0 null extracellular membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null NCI-H2030 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.882363 posteroventral (inferior) parietal cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.09929 Gigantocellular reticular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02286 zygote TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.398357 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-4731-01A-01R-1436-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null H3K4me1_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null plant primordium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.199048 layer 3 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3618 CCLFPEDS0003T DepMap CRISPR Gene Dependency 1.0 2.53159 mental depression GWASdb SNP-Disease Associations 1.0 0.672922 central part of CEl Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.31778 intracellular COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 MAZ ENCODE Transcription Factor Targets 1.0 null lateral hemisphere of cerebellum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.889549 Pheochromocytoma and Paraganglioma_PCPG_TCGA-P7-A5NY-05A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null brain TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null rhombomere 10 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16711 mantle zone of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56522 SNU-484 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.25139 Anterolateral visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.57641 condensed nuclear chromosome COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.183328 chromosomal part GO Cellular Component Annotations 2015 1.0 null structure GeneRIF Biological Term Annotations 1.0 null H3K4me1_MEL cell line_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null seedling TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.075677 r9 portion of vagal motor nucleus (postmigratory) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56522 r10 part of solitary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.6534 improved glucose tolerance MGI Mouse Phenotype Associations 2023 1.0 null macromolecular complex GO Cellular Component Annotations 2015 1.0 null A4/FUK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.06049 leaf TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.07979 medial part of r8B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.53873 chromatin organization GO Biological Process Annotations 2015 1.0 null plant embryo TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.075677 r9 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.97171 bronchus HPA Tissue Protein Expression Profiles -1.0 -0.774522 shoot TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.074424 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4167-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Inflammation CTD Gene-Disease Associations 1.0 1.37418 primary visual cortex (striate cortex, area V1/17)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.11435 nuclear chromosome COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.130283 JM1 DepMap CRISPR Gene Dependency 1.0 5.43961 telmisartan_rattus norvegicus_gpl4135_gse29445 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null macromolecular complex subunit organization GO Biological Process Annotations 2015 1.0 null MDAMB436 CCLE Cell Line Gene CNV Profiles -1.0 -1.56661 MDAMB436 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles -1.0 -1.47686 nucleolus GO Cellular Component Annotations 2023 1.0 null CORL51 CCLE Cell Line Gene Expression Profiles -1.0 -2.13021 CHAGO-K-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.25303 Kidney renal papillary cell carcinoma_KIRP_TCGA-B9-A69E-01A-11R-A31O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.82378 H3K4me1_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CAL33 CCLE Cell Line Gene Expression Profiles 1.0 1.34994 KPNYS DepMap CRISPR Gene Dependency 1.0 2.08554 Vascular Diseases CTD Gene-Disease Associations 1.0 1.10803 primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.29625 H3K27ac_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null mantle zone of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38695 Lung adenocarcinoma_LUAD_TCGA-55-7570-01A-11R-2039-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null regulation of metabolic process GO Biological Process Annotations 2015 1.0 null GlobusPallidus BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.955475 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null periventricular stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.76429 Lung adenocarcinoma_LUAD_TCGA-69-7980-01A-11R-2187-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null salivary gland GTEx Tissue Gene Expression Profiles -1.0 -1.17451 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5080-01A-01R-1503-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null double-stranded DNA binding GO Molecular Function Annotations 2023 1.0 null sperm GeneRIF Biological Term Annotations 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4700-01A-02R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-44-2655-11A-01R-1758-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nuclear part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.043558 chromosome COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 Memory Disorders CTD Gene-Disease Associations 1.0 1.1461 MZ in caudal cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.831234 H3K27ac_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GATA1_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null regulation of dna methylation GO Biological Process Annotations 2015 1.0 null membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 r2 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07844 BHLHE40_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posteromedial visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.84924 thyroid gland HPA Tissue Protein Expression Profiles -1.0 -0.774522 NCI-H146 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05431 CHD2_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null r3 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03316 E2A MotifMap Predicted Transcription Factor Targets 1.0 null primary motor cortex (area M1, area 4)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.877186 layer 2 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.28465 CALU-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31417 female germ cell nucleus GO Cellular Component Annotations 2015 1.0 null Uterine Carcinosarcoma_UCS_TCGA-QM-A5NM-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null layer 4 of ERCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.67712 RT112 DepMap CRISPR Gene Dependency 1.0 2.44342 CAKI-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 KURAMOCHI CCLE Cell Line Gene Expression Profiles 1.0 1.41189 NCI-H727 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.3195 Lean Body Mass DisGeNET Gene-Phenotype Associations 1.0 null TIA1_KO_GSE54418_264_mouse_cerebellum GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null TE10 Achilles Cell Line Gene Essentiality Profiles 1.0 1.22626 single-organism cellular process GO Biological Process Annotations 2015 1.0 null MAFA MotifMap Predicted Transcription Factor Targets 1.0 null AtrioventricularNode BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.46225 A-VN-1203-2004(H5N1)_Day4-10^4pfu_22074594_GSE33263 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.67585 graafian GeneRIF Biological Term Annotations 1.0 null HSC39 DepMap CRISPR Gene Dependency 1.0 2.22825 RAD21_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HT-144 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.74267 pyramidal layer of taenia tecta Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18274 Androgen insensitivity syndrome_Fibroblast_GSE3871 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.43842 dorsolateral prefrontal cortex_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.14399 PC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.091 layer 5 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.329 r9 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01314 r8 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.40734 BL41 CCLE Cell Line Gene CNV Profiles -1.0 -2.5021 Lung squamous cell carcinoma_LUSC_TCGA-60-2724-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Posterior parietal association areas, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.66441 H3K4me1_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null germinal vesicle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 1.10205 MM253 DepMap CRISPR Gene Dependency 1.0 3.39854 Nucleus of the solitary tract, commissural part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.44875 Kidney renal clear cell carcinoma_KIRC_TCGA-A3-3317-01A-02R-1325-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Adrenocortical carcinoma_ACC_TCGA-PK-A5HA-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null AOB, outer plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27812 dna packaging complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.007697 YY1 MotifMap Predicted Transcription Factor Targets 1.0 null tongueepidermis BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.923498 Entorhinal area, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00782 whole plant TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.072812 SMC3 ENCODE Transcription Factor Targets 1.0 null HCC70 CCLE Cell Line Gene CNV Profiles 1.0 1.54547 Lung adenocarcinoma_LUAD_TCGA-73-4675-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H2AFZ ENCODE Transcription Factor Targets 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3SL-01A-21R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null condensed chromosome COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.137428 breast HPA Tissue Protein Expression Profiles 1.0 0.710207 inner SZ in frontal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.07007 r7 part of nucleus prepositus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.48887 Hypoglossal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.7421 abnormality of the vasculature GWASdb SNP-Phenotype Associations 1.0 0.752816 BHT101 CCLE Cell Line Gene Expression Profiles -1.0 -1.55812 mantle zone of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.3598 PANC 04.03 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.12281 Sarcoma_SARC_TCGA-DX-A6YR-01A-33R-A355-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null extracellular region COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 Lung adenocarcinoma_LUAD_TCGA-05-4434-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intracytoplasmic GeneRIF Biological Term Annotations 1.0 null H3K4me1_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null intermediate stratum of IC Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06858 outer portion of lateral ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.916103 Dorsal motor nucleus of the vagus nerve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.46666 H3K4me1_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null cognitive disorder GWASdb SNP-Disease Associations 1.0 0.109919 inner CP in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.4827 inner CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.46891 Sarcoma_SARC_TCGA-DX-A2IZ-01A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null outer portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.0243 NCI-H1882 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03479 periventricular stratum of AStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21267 Lung adenocarcinoma_LUAD_TCGA-L4-A4E5-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1YX-06A-11R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CHD2_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me1_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.35931 disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.041453 amygdaloid complex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.929358 mantle zone of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16225 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4868-01A-01R-1305-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null tonsil HPA Tissue Protein Expression Profiles -1.0 -1.29472 primary auditory cortex (core)_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.22154 GATA1_G1E-ER4_mm9_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null female germ cell nucleus COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 1.10205 OB olfactory fiber layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.07705 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null SNU626 CCLE Cell Line Gene CNV Profiles -1.0 -1.43382 Retrosplenial area, lateral agranular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.61967 external part of AOD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35557 mantle zone of APal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10506 Breast Cancer_Mammary Gland Tissue_GSE1379 GEO Signatures of Differentially Expressed Genes for Diseases -1.0 -1.9986 SKBR3 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.680176 HS-SULTAN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01744 IM-95 COSMIC Cell Line Gene Mutation Profiles 1.0 null KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.52327 Necrosis CTD Gene-Disease Associations 1.0 1.14473 H2AFZ_K562_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MM1S Achilles Cell Line Gene Essentiality Profiles 1.0 1.34649 OVCAR4 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.10237 CALU3 CCLE Cell Line Gene CNV Profiles 1.0 1.61506 CFPAC1 Achilles Cell Line Gene Essentiality Profiles 1.0 1.21451 mediodorsal nucleus of thalamus_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.06882 hypocotyl TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.077587 intracellular non-membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null disease GWASdb SNP-Disease Associations 1.0 0.028306 primary visual cortex (striate cortex, area V1/17)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.16082 nucleic acid binding GO Molecular Function Annotations 2015 1.0 null Pancreatic adenocarcinoma_PAAD_TCGA-3A-A9I9-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung adenocarcinoma_LUAD_TCGA-MP-A4T7-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventral premammillary nucleus (migrated) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.37993 Hyperplasia CTD Gene-Disease Associations 1.0 1.19966 H3K4me1_G1E-ER4_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A17Z-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null vagina HPA Tissue Protein Expression Profiles -1.0 -0.774522 periventricular stratum of r9Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56315 posteromedial visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.44039 negative regulation of cellular process GO Biological Process Annotations 2015 1.0 null periventricular stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04871 osteoblasts BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.03411 MECOM ChEA Transcription Factor Targets 1.0 null heterocyclic compound binding GO Molecular Function Annotations 2015 1.0 null SF295 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.45564 Orbital area, ventrolateral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11623 Lateral visual area, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.98592 NCIH522 DepMap CRISPR Gene Dependency 1.0 2.33938 MFE-319 COSMIC Cell Line Gene Mutation Profiles 1.0 null nucleosomal dna binding GO Molecular Function Annotations 2015 1.0 null pronucleus COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.233817 cytoskeletal part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.053928 H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Entorhinal area, medial part, ventral zone, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.48074 parabigeminal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.11313 SW 403 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.976233 MCF10DCIS.COM Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.8626 HCC2270 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.39714 COLO 857 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.8626 layer V of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.850506 H3K4me2_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-MP-A4T8-01A-11R-A24X-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.78716 layer IIIu of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.971735 orbital frontal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.57144 COLO679 DepMap CRISPR Gene Dependency 1.0 2.98735 Sarcoma_SARC_TCGA-IS-A3K6-01A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nuclear part GO Cellular Component Annotations 2015 1.0 null testis HPA Tissue Protein Expression Profiles 1.0 0.951672 H3K4me1_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null thyroid BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.23082 Brain Lower Grade Glioma_LGG_TCGA-DU-7012-01A-11R-2027-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleosome binding GO Molecular Function Annotations 2015 1.0 null NCIH2170 DepMap CRISPR Gene Dependency 1.0 2.39276 trophoblast TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.093812 inferolateral temporal cortex (area TEv, area 20)_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 3.06663 USF2 JASPAR Predicted Transcription Factor Targets 1.0 null chromatin dna binding GO Molecular Function Annotations 2015 1.0 null mammalian phenotype MPO Gene-Phenotype Associations 1.0 null TUHR10TKB CCLE Cell Line Gene CNV Profiles -1.0 -1.9466 SNU81 DepMap CRISPR Gene Dependency 1.0 2.0976 COLO775 CCLE Cell Line Gene Expression Profiles 1.0 3.40796 LN235 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.65942 ZNF384 ENCODE Transcription Factor Targets 1.0 null intermediate stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.90842 all GWASdb SNP-Phenotype Associations 1.0 0.030803 BL6644 (EPS15L1) NURSA Protein Complexes 1.0 null leaf primordium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.16072 r9 part of the inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1586 chromatin COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 MDA-MB-436 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 Lung adenocarcinoma_LUAD_TCGA-O1-A52J-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null membrane-bounded organelle GO Cellular Component Annotations 2015 1.0 null Ventral premammillary nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.24599 cell COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.249664 KYSE30 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.39017 SOX2 ChEA Transcription Factor Targets 1.0 null intracellular membrane-bounded organelle GO Cellular Component Annotations 2023 1.0 null MZ in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.877954 layer I of piriform cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.40596 RPMI7951 DepMap CRISPR Gene Dependency 1.0 2.19186 Anterolateral visual area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.15434 HMGN3 ENCODE Transcription Factor Targets 1.0 null negative regulation of developmental process GO Biological Process Annotations 2015 1.0 null NCIH1755 DepMap CRISPR Gene Dependency 1.0 3.48414 NCI-H2052 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.62229 extracellular vesicle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 ZNF384_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null EW16 DepMap CRISPR Gene Dependency 1.0 2.88382 osteoclasts BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.40033 r9 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.57136 COR-L279 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.72704 disease DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.040071 Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6GZ-01A-11R-A35K-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null H3K4me3_HepG2_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SNU668 CCLE Cell Line Gene Expression Profiles 1.0 1.66704 TBP_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO783 Achilles Cell Line Gene Essentiality Profiles 1.0 1.87065 primary auditory cortex (core)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.966655 extracellular region part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 PATU8988T DepMap CRISPR Gene Dependency 1.0 2.54904 cellular process GO Biological Process Annotations 2015 1.0 null cytoskeleton COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.076079 NCIH2196 CCLE Cell Line Gene CNV Profiles 1.0 1.52078 primary auditory cortex (core)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.4826 A172 CCLE Cell Line Gene CNV Profiles 1.0 1.66115 HUO9 DepMap CRISPR Gene Dependency 1.0 3.03399 Ovarian Neoplasms CTD Gene-Disease Associations 1.0 1.01512 primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.64792 MM160113 DepMap CRISPR Gene Dependency 1.0 4.87866 layer 1 of LOT Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.53196 nucleosome assembly GO Biological Process Annotations 2015 1.0 null MZ in dorsomedial parietal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.887371 nucleus COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 primordium TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.20245 male reproductive system TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.447961 TAL1_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null lymph node HPA Tissue Protein Expression Profiles -1.0 -0.774522 mantle zone of r10BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.96766 Kidney renal clear cell carcinoma_KIRC_TCGA-B8-A54F-01A-11R-A266-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Nmyc_OE_GDS2406_14_mouse_LUNG GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null r10 basal plate Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44778 Anteromedial visual area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3077 MCF7 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.847879 MAX_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC202 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.14228 medial part of r6B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25885 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4165-01A-02R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superficial stratum of TTe Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.18235 Kidney renal clear cell carcinoma_KIRC_TCGA-A3-A6NJ-01A-12R-A33J-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null POLR2AphosphoS5_G1E_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null FGFR3_KD_GDS4454_79_human_RT112 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A3RD-01A-12R-A22U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H460 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03479 ONCODG1 CCLE Cell Line Gene CNV Profiles 1.0 2.28431 microtubule cytoskeleton COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.252202 gametocyte TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.178599 membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null r5 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16152 fallopian tube GTEx Tissue Gene Expression Profiles 1.0 0.897818 Primary somatosensory area, trunk, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04108 HS 766T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03479 SK-MEL-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.25303 KCIMOH1 DepMap CRISPR Gene Dependency 1.0 6.9783 dorsomedial hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.20683 H3K4me1_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-6985-11A-01R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A3IE-01A-11R-A20F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r6 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.06924 pancreas BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.868025 follicles GeneRIF Biological Term Annotations 1.0 null macromolecular complex assembly GO Biological Process Annotations 2015 1.0 null Anteromedial visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.68725 anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.8455 ovarian follicle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 1.00327 superficial part of arcuate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.08752 Supraoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0209 choroid plexus of the fourth ventricle Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.63034 ETS2 MotifMap Predicted Transcription Factor Targets 1.0 null female germ cell nucleus COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 Prostate adenocarcinoma_PRAD_TCGA-VP-A87E-01A-31R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-5677-01A-11R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lingula (I), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.24847 r6 part of ventral gigangocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51878 HT1376 DepMap CRISPR Gene Dependency 1.0 3.19081 GATA1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KAT2A ENCODE Transcription Factor Targets 1.0 null meristem TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.713369 Entorhinal area, medial part, ventral zone Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.40717 organelle part GO Cellular Component Annotations 2015 1.0 null H3K4me1_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A905-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH1105 CCLE Cell Line Gene CNV Profiles 1.0 1.98479 EP300_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null HCC1187 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 H3K36me3_skeletal muscle myoblast_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-DX-A7ET-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MDAPCA2B CCLE Cell Line Gene CNV Profiles -1.0 -2.40082 NIHOVCAR3 CCLE Cell Line Gene CNV Profiles 1.0 2.24115 upper (rostral) rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.14207 estradiol_homo sapiens_gpl570_gse16683 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B8-5553-01A-01R-1541-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null regulation of dna metabolic process GO Biological Process Annotations 2015 1.0 null intracellular part GO Cellular Component Annotations 2015 1.0 null KMS20 DepMap CRISPR Gene Dependency 1.0 2.89722 PC3 CCLE Cell Line Gene CNV Profiles -1.0 -1.3796 PAX2 JASPAR Predicted Transcription Factor Targets 1.0 null core of T-DMH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02634 IMR-32 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.06049 KYSE270 CCLE Cell Line Gene CNV Profiles 1.0 2.0583 59M Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.954939 Head and Neck squamous cell carcinoma_HNSC_TCGA-CN-A63W-01A-11R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GATA1 ENCODE Transcription Factor Targets 1.0 null binding GO Molecular Function Annotations 2015 1.0 null H3K9ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CD34+ BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.53895 abnormal emotion/affect behavior GWASdb SNP-Phenotype Associations 1.0 0.292395 HEL9217 DepMap CRISPR Gene Dependency 1.0 4.41023 infertility DISEASES Text-mining Gene-Disease Association Evidence Scores 1.0 0.693098 cell cycle GO Biological Process Annotations 2015 1.0 null JUN_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Rectum adenocarcinoma_READ_TCGA-AG-3902-01A-01R-A32Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Visual areas Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.52976 Adrenocortical carcinoma_ACC_TCGA-OR-A5LN-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null MZ in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01914 primary auditory cortex (core)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.908232 posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -3.49975 SKMG1 DepMap CRISPR Gene Dependency 1.0 2.47177 Skin BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.0827 duodenum HPA Tissue Protein Expression Profiles 1.0 1.87282 JHH-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 H3K27me3_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ETS1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null H3K4me3_G1E-ER4_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null BICR31 CCLE Cell Line Gene Expression Profiles 1.0 1.44083 SF268 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03342 Prostate adenocarcinoma_PRAD_TCGA-G9-6366-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null germ cell nucleus COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 G130 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.50808 inner SZ in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.830042 dorsolateral prefrontal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.930972 periventricular stratum of r10Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.65414 tissues, cell types and enzyme sources TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.556865 PrefrontalCortex BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.12056 Paragigantocellular reticular nucleus, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21029 lateral hypothalamic area, anterior part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.31397 pyramidal cells of caudal CA4 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.888387 RD CCLE Cell Line Gene Expression Profiles -1.0 -2.40011 STAT1_01_21 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 0.815 dna bending complex GO Cellular Component Annotations 2015 1.0 null Simple lobule Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2991 cellular_component GO Cellular Component Annotations 2015 1.0 null chromatin GeneRIF Biological Term Annotations 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-DD-A73F-01A-11R-A32O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH2171 CCLE Cell Line Gene CNV Profiles 1.0 1.37392 ECC4 DepMap CRISPR Gene Dependency 1.0 2.24336 negative regulation of DNA metabolic process GO Biological Process Annotations 2023 1.0 null germ cell nucleus GO Cellular Component Annotations 2015 1.0 null organelle part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.41143 layer 6 of OCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.23983 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4988-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SUM 149PT Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.03479 Anteromedial visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.61801 Posterior parietal association areas, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.00525 animal TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.538604 embryoid body TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.348889 RAMOS-2G6-4C10 COSMIC Cell Line Gene Mutation Profiles 1.0 null RCOR1 ENCODE Transcription Factor Targets 1.0 null U-937 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.12281 Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OL-01A-11R-A33R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null apoptotic dna-fragmentation and tissue homeostasis Biocarta Pathways 1.0 null negative regulation of stem cell differentiation GO Biological Process Annotations 2015 1.0 null MYC ENCODE Transcription Factor Targets 1.0 null posteromedial visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.25817 NCIH747 CCLE Cell Line Gene CNV Profiles 1.0 1.39385 Pancreatic adenocarcinoma_PAAD_TCGA-XN-A8T5-01A-12R-A36G-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Sarcoma_SARC_TCGA-MB-A8JK-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null striatal amygdala Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.13073 STAT3_deficiency_GDS3106_58_mouse_type II alveolar cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null KYSE-270 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.40435 184B5 Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles 1.0 0.978517 shell of T-DMH Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31965 intracellular organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 Prostate adenocarcinoma_PRAD_TCGA-G9-6499-01A-12R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Dorsomedial nucleus of the hypothalamus, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.1385 medial part of r7B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56455 EBC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.19734 SOX2-21211035-LN229_GBM-HUMAN ChEA Transcription Factor Binding Site Profiles 1.0 null YAMATO DepMap CRISPR Gene Dependency 1.0 5.52947 somatic cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.873172 r7 part of basomedial reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.22668 Pancreatic adenocarcinoma_PAAD_TCGA-IB-AAUS-01A-12R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null tail of caudate Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.73194 HCC2218 CCLE Cell Line Gene CNV Profiles -1.0 -2.83955 gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.286736 single-organism process GO Biological Process Annotations 2015 1.0 null inner CP in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.38967 COLO 829 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.977433 inner SZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.967387 amygdaloid complex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.08994 Lung adenocarcinoma_LUAD_TCGA-05-4420-01A-01R-1206-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TBP ENCODE Transcription Factor Targets 1.0 null inferolateral temporal cortex (area TEv, area 20)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.934457 Primary visual area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27045 lateral anterior hypothalamic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04731 Lung adenocarcinoma_LUAD_TCGA-91-8497-01A-11R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null structure-specific dna binding GO Molecular Function Annotations 2015 1.0 null Skin Cutaneous Melanoma_SKCM_TCGA-EE-A183-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HT115 DepMap CRISPR Gene Dependency 1.0 2.62549 dorsolateral prefrontal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.06674 HDAC1 ENCODE Transcription Factor Targets 1.0 null BICR16 DepMap CRISPR Gene Dependency 1.0 2.04849 outer CP in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.10339 YD38 DepMap CRISPR Gene Dependency 1.0 2.32411 SW837 CCLE Cell Line Gene Expression Profiles 1.0 2.11093 RCOR1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYOD1_myocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null intercalated amygdaloid nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.11246 H3K4me1_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null pituitary GTEx Tissue Gene Expression Profiles 1.0 1.23006 striatum_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.61017 SNU81 CCLE Cell Line Gene Expression Profiles -1.0 -1.58018 Brain Lower Grade Glioma_LGG_TCGA-E1-A7YN-01A-11R-A34F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null r7 part of gigantocellular reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41853 HMEL CCLE Cell Line Gene Expression Profiles 1.0 1.52766 TCF4 MotifMap Predicted Transcription Factor Targets 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4159-01A-02R-1289-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OVCA 432 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31223 semen TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.66071 caudal (posterior) extramural migratory stream Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.865506 Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5115-01A-01R-1420-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ventrolateral preoptic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.89411 Lung adenocarcinoma_LUAD_TCGA-95-7562-01A-11R-2241-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.18274 G28T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.841563 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AC-06A-11R-A18S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null immature ovarian follicle TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.938777 ovary BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.07372 protein-dna complex assembly GO Biological Process Annotations 2015 1.0 null CAL27 CCLE Cell Line Gene Expression Profiles 1.0 1.45418 intracellular organelle GO Cellular Component Annotations 2015 1.0 null Perturb_67_KO_Rnf114_SRP301146 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations 1.0 20.0 morula TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.564833 endocrine gland TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.32132 Sarcoma_SARC_TCGA-DX-A2J1-01A-11R-A21T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cell part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.098109 Brain Lower Grade Glioma_LGG_TCGA-DU-8165-01A-11R-2256-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SH10TC DepMap CRISPR Gene Dependency 1.0 3.18298 Head and Neck squamous cell carcinoma_HNSC_TCGA-KU-A66S-01A-21R-A30B-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-KK-A59V-01A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IGR1 CCLE Cell Line Gene Expression Profiles -1.0 -1.59386 chromatin DNA binding GO Molecular Function Annotations 2023 1.0 null periventricular stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.73111 VRK1_knockout_64_GSE19329 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations -1.0 -1.14909 cell part GO Cellular Component Annotations 2015 1.0 null r8 portion of the hypoglossal motor nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.67946 Accessory olfactory bulb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21669 Skeletal Muscle Male Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles 1.0 1.0788 r6 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.73111 MZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.827676 Prostate adenocarcinoma_PRAD_TCGA-VP-A872-01A-11R-A352-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.35027 SP in entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.992557 Perturb_16605_KO_Bend2_SRP357909 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.52683 SW1783 CCLE Cell Line Gene CNV Profiles -1.0 -1.99912 Linker histone H1/H5, domain H15 InterPro Predicted Protein Domain Annotations 1.0 null non-membrane-bounded organelle COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.439333 gallbladder HPA Tissue Protein Expression Profiles 1.0 1.87282 DAN-G Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.05431 NCI-H28 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.919651 A172 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.31697 TASK1 DepMap CRISPR Gene Dependency 1.0 2.61338 COLO205 Achilles Cell Line Gene Essentiality Profiles 1.0 1.01256 TKKK DepMap CRISPR Gene Dependency 1.0 2.36856 Posterior parietal association areas, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12876 MINO CCLE Cell Line Gene CNV Profiles -1.0 -1.82369 SQ1 CCLE Cell Line Gene CNV Profiles 1.0 1.57079 amygdaloid complex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.943487 BALL-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null NCIH2882 DepMap CRISPR Gene Dependency 1.0 2.08154 layer IIIa of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.135 G111 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.87632 EWS502 CCLE Cell Line Gene CNV Profiles -1.0 -1.35716 JUND_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Sarcoma_SARC_TCGA-QQ-A8VH-01A-11R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null protein complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.001505 hippocampus (hippocampal formation)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.20803 BC3C CCLE Cell Line Gene CNV Profiles 1.0 1.42533 MONOMAC1 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.07333 outer SZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.80515 intracellular part COMPARTMENTS Text-mining Protein Localization Evidence Scores 1.0 0.304027 apical meristem TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.251279 NCIH196 CCLE Cell Line Gene CNV Profiles 1.0 1.64582 posteroventral (inferior) parietal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.16403 membrane-bounded vesicle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.237908 ovary TISSUES Text-mining Tissue Protein Expression Evidence Scores 1.0 0.829034 posteroventral (inferior) parietal cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.84891 HCC4017 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.62229 GFI1B-20887958-HPC-7-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null NCI-H1395 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.3195 LNZ308 Achilles Cell Line Gene Essentiality Profiles -1.0 -1.57841 HCC1500 CCLE Cell Line Gene CNV Profiles -1.0 -1.74815 NCIH209 CCLE Cell Line Gene Expression Profiles -1.0 -1.79176 vesicle GO Cellular Component Annotations 2015 1.0 null Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-6225-01A-11R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intermediate part of r10B Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.37751 NCI-H1792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.842143 chromosome organization GO Biological Process Annotations 2023 1.0 null Retrosplenial area, lateral agranular part, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0975 Anteromedial visual area, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.34094 chromosome condensation GO Biological Process Annotations 2023 1.0 null