association dataset threshold value standardized value BTN2A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.25902 MRPS5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4796 PMC4677459-NIHMS65392-supplement-Dataset3.xlsx-HIF1A-Unnamed_2_HIF1A Rummagene Transcription Factor Associations 2026 1.0 null TBC1D9B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.19409 TUBB4A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.46571 IKBKE CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.19661 AGAP5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48678 Cell type cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.392 Hematopoietic system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.25 STRN4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87622 PMC7388612-vdaa078_suppl_supplementary_table_6.xlsx-MRs_PN_Rim-vs-MRs_PN_C-MR_NR3C2 Rummagene Transcription Factor Associations 2026 1.0 null SNX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.27103 Organ system cancer DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 PMC8384902-mmc5.xlsx-H128_ASCL1_ChIP-Symbol_ASCL1 Rummagene Transcription Factor Associations 2026 1.0 null ASXL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.40338 USP7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.478 496100322_FWM_possible Alzheimer's disease_no TBI_100+_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58751 NPR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.3391 CHERP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 6.34711 G0S2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.05718 PRCP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.1242 DNAJC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.31779 SLX4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96502 PMC4773428-ncomms10751-s4.xlsx-S_Table_3-Supplementary_Data_3_497_common_genes_differentially_expressed_in_ER_breast_tumors_with_RUNX1_mutations_in_both_TCGA_and_Ellis_et_al_cohorts_FC_1_3_RUNX1 Rummagene Transcription Factor Associations 2026 1.0 null NOP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43024 ATRX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.56027 PMC8758144-elife-74272-supp3.xlsx-AP2_REP2-GeneName_GTF3A Rummagene Transcription Factor Associations 2026 1.0 null POU3F3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41127 SMARCA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.86439 Cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.679 TRAK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.13194 RAB11FIP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30184 ZNF16 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.18598 ANKRD35 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.37956 PMC12240782-Table3.xlsx-Sheet1-E2F1_E2F1 Rummagene Transcription Factor Associations 2026 1.0 null MRPL36 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.04811 DNAAF10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68526 DAG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.11602 PALM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49255 Lower respiratory tract disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.112 PCM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.7994 LFNG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.19775 PMC11096100-41588_2024_1714_MOESM3_ESM.xlsx-ST18-Unnamed_1_ST18 Rummagene Transcription Factor Associations 2026 1.0 null MGAT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.95382 Bladder GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 PMC12410371-CTM2-15-e70418-s002.pdf-22-ENSG00000188171_ZNF626 Rummagene Transcription Factor Associations 2026 1.0 null SLC25A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.24839 Brain - Cerebellar Hemisphere GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 CEP41 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.42377 Nervous system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.349 PMC11749115-loae020_suppl_Supplementary_Table_S2.xlsx-CHOP-high-gene_DDIT3 Rummagene Transcription Factor Associations 2026 1.0 null Lower respiratory tract disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 Central nervous system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.092 Cognitive disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.013 POU4F1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.92725 GJD4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.34505 Female reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.146 PMC6718408-41467_2019_11884_MOESM9_ESM.xlsx-YAP1_RELA_DEGs_mice_human-Human_Gene_RELA Rummagene Transcription Factor Associations 2026 1.0 null PMC12019336-41467_2025_58868_MOESM5_ESM.xlsx-Open_peaks_IKAROS_WT-Unnamed_5_IKZF1 Rummagene Transcription Factor Associations 2026 1.0 null PMC10243915-uxad037_suppl_supplementary_table_s1a.pdf-341-ZNF232_ZNF232 Rummagene Transcription Factor Associations 2026 1.0 null Lymphatic system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.014 NFE4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.22824 ARSI CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.52346 BLOC1S3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.74497 PMC8758144-elife-74272-supp3.xlsx-AP2_REP1-GeneName_GTF3A Rummagene Transcription Factor Associations 2026 1.0 null LRR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.30474 KRBOX5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.61593 ZFP92 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.17084 WASHC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.48855 NAT9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60745 MLST8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.88516 MBD6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.35995 C5orf22 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.88778 CD59 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.55005 PLD6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.04915 FNBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7689 CALR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.41892 ADSL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.31863 PMC7863452-12920_2021_883_MOESM2_ESM.xls-SRG_23_HCC_vs_17_NT-GENENAME_CASZ1 Rummagene Transcription Factor Associations 2026 1.0 null RBM19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15643 Cancer DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 ATP5PO CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.76476 PMC7863452-12920_2021_883_MOESM6_ESM.xls-SRG_13_GE2-HCC_vs_10_GE1-HCC-GENENAME_CASZ1 Rummagene Transcription Factor Associations 2026 1.0 null SPATA25 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.92295 PCDHB8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.23506 PMC12396377-jcb_202307079_tables1.xlsx-Fig_1C_i_-_iii_right-x_TFEB_KOcon_VS_WTcon_UP_TFEB Rummagene Transcription Factor Associations 2026 1.0 null Melancholic depression DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 2.037 RFX7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.00304 DR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.66949 Acne DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.621 PMC8384902-mmc2.xlsx-5_POU2F3_high_subtype-Gene_Symbol_POU2F3 Rummagene Transcription Factor Associations 2026 1.0 null CSTF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.19146 SMUG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.17878 Disease of anatomical entity DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 C1QBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76461 Chronic obstructive pulmonary disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.245 496100295_TCx_possible Alzheimer's disease_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58946 GOLGA6A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.49326 GINS4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.83189 SLC26A6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15457 RIF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.2356 CDPF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.66599 MYRF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.23002 Prostatic hypertrophy DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.915 RASSF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.10553 ZNF808 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76665 EIF1AY CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.31995 Autoimmune disease of musculoskeletal system DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.162 PHF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.0047 MLLT6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87909 MVB12A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.07917 Breast cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.278 MRC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.52748 FBRS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.86966 USE1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66545 Depressive disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 2.037 496100337_HIP_possible Alzheimer's disease_no TBI_100+_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.5887 ZNF793 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.06388 Respiratory system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.122 496100383_HIP_no dementia_no TBI_95-99_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.5871 PMC7617064-EMS151900-supplement-Extended_Data_Figure_5_Source_Data.xlsx-CLC_D9_DEG-Logfold_change_threshold_1_0_CENPX Rummagene Transcription Factor Associations 2026 1.0 null GLOD4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.03445 ETF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.68219 ADPGK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0636 Mood disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 2.037 Respiratory system disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 CDX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.38942 SAMD8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15655 PMC10311050-mmc2.pdf-22-MEIS1-AS2_MEIS1 Rummagene Transcription Factor Associations 2026 1.0 null PARP10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.06986 WNK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.08052 Vagina GTEx Tissue Gene Expression Profiles 2023 1.0 1.59474 PMC3712200-584604.f1.pdf-28-GRHL1_GRHL1 Rummagene Transcription Factor Associations 2026 1.0 null PMC12410371-CTM2-15-e70418-s002.pdf-22-ZNF626_ZNF626 Rummagene Transcription Factor Associations 2026 1.0 null DERL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.19376 HILPDA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.39002 ATP5F1E CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60978 Thoracic cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.285 UBA3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.51266 PFDN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.91072 Major depressive disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 2.037 PITX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.65827 Adipose - Subcutaneous GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 Breast disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.282 SPAST CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.58001 PMC9805873-Supp_Data.xlsx-dCas9-SALL1-SDS3_SEL1L_pool-id_SALL1 Rummagene Transcription Factor Associations 2026 1.0 null SOX15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.26641 VSX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.14001 PMC11625982-AJH-100-10-s001.pdf-26-ZNF682_ZNF682 Rummagene Transcription Factor Associations 2026 1.0 null Lung squamous cell carcinoma DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.574 PMC7378211-41598_2020_69015_MOESM3_ESM.xlsx-EWS-WT1_rep1_testp-7_annotatedp-Nearest_Ensembl_WT1 Rummagene Transcription Factor Associations 2026 1.0 null RELT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.20595 Connective tissue disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.223 NDUFS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.34402 Squamous cell carcinoma DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.574 post-traumatic stress disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.635 Vascular disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.013 PMC5932012-41467_2018_4180_MOESM18_ESM.xlsx-Table_19-GSEA_Gene_lists-Zuber_Myb_KD_DN_HUMAN_AR Rummagene Transcription Factor Associations 2026 1.0 null PMC12198403-41398_2025_3437_MOESM1_ESM.xlsx-S9-Table_S9_The_results_of_the_MR_analysis_of_significant_druggable_genes_and_cognitive_performance_NR3C2 Rummagene Transcription Factor Associations 2026 1.0 null PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-E2F7_E2F7 Rummagene Transcription Factor Associations 2026 1.0 null PMC8384902-mmc5.xlsx-H2107_PROX1_ChIP-Symbol_PROX1 Rummagene Transcription Factor Associations 2026 1.0 null GARS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.70342 RSU1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.66116 PMC8724844-bt-30-1-98-supple2.xlsx-GO_BP-TFAP4_TFAP4 Rummagene Transcription Factor Associations 2026 1.0 null NDUFA13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29155 ADAMTS7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29947 INIP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15498 RPL12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.90445 PMC10311050-mmc2.pdf-62-MAZ_MAZ Rummagene Transcription Factor Associations 2026 1.0 null PPP1R12C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.11342 UVSSA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.36155 PMC8384902-mmc2.xlsx-3_ASCL1_high_subtype-Gene_Symbol_ASCL1 Rummagene Transcription Factor Associations 2026 1.0 null GDPD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.58518 FAM53C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.1434 MTFMT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.3047 CRMP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.47239 TMEM147 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.42008 SMARCA4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.82628 Disease of cellular proliferation DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 PMC10011543-41419_2023_5707_MOESM4_ESM.xlsx-genes_with_unique_SNP-F5-Thygro-r__CIC-1n_h-r__CIC-2n_h-r_CIC Rummagene Transcription Factor Associations 2026 1.0 null CPXCR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.26351 Musculoskeletal system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.322 PMC11799530-12276_2024_1380_MOESM1_ESM.xlsx-DEG_KD_PC-Symbol_AR Rummagene Transcription Factor Associations 2026 1.0 null ADI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.68979 Obstructive lung disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.245 Adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.056 RPAIN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53795 PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Genes_significantly_differentially_expressed_between_H9_and_GATA6_4ins_at_day_3_in_RNA-seq_GATA6 Rummagene Transcription Factor Associations 2026 1.0 null SKIC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.31651 PDCD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.21664 UBE2T CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.20142 LACC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78201 MEF2A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.21937 LMO2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.50795 PMC9899501-NIHMS1869252-supplement-Table_S4.xlsx-REACTOME_CUTOFF_2_5_TOTAL-HAND1_HAND1 Rummagene Transcription Factor Associations 2026 1.0 null PMC7439574-13148_2020_914_MOESM2_ESM.xlsx-log2_fold_change_-2-1280_genes_are_more_than_four-fold_downregulated_in_PRDM8-_-_compared_to_control_PRDM8 Rummagene Transcription Factor Associations 2026 1.0 null NUP85 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.23425 SSNA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.35402 SREBF2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8847 Reproductive system disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.915 Immune system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.313 NIFK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.12525 TDGF1P3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.28345 NEK8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.93589 EEF1A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.2911 Disease by infectious agent DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.085 PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-E2F1_E2F1 Rummagene Transcription Factor Associations 2026 1.0 null E2F8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.97546 BMPR1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.65438 ABT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54274 496100297_FWM_possible Alzheimer's disease_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58949 Anxiety disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.635 RPS29 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.11552 TLX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.19713 PMC10199266-mmc2.xlsx-RUNX1-DEGs-Unnamed_1_RUNX1 Rummagene Transcription Factor Associations 2026 1.0 null SLC31A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96938 EPHA8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.1131 CDK12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.60087 PMC10746608-427_2023_709_MOESM4_ESM.xlsx-KLF4_Targets_Enrichment-Unnamed_54_KLF4 Rummagene Transcription Factor Associations 2026 1.0 null PMC11568168-41598_2024_79607_MOESM3_ESM.xls-11-E2F1_E2F1 Rummagene Transcription Factor Associations 2026 1.0 null ZBED3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.1478 Nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.459 SSB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.55587 RAB5C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.09702 PRKAG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15863 NPIPB4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60409 RAB1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37325 RALY CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.41812 C2CD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54619 RFC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.72842 MRTFA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.53028 SPPL2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.38771 Lung non-small cell carcinoma DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.574 RPL18A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.55627 496100417_HIP_probable Alzheimer's disease_TBI_88_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58862 Brain - Nucleus accumbens (basal ganglia) GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 PMC8370976-41467_2021_24932_MOESM6_ESM.xlsx-Annotation-Supplementary_Data_4_GO_and_metascape_analysis_of_the_genes_downregulated_in_U87_cells_upon_ZNF768_knockdown_ZNF768 Rummagene Transcription Factor Associations 2026 1.0 null Intraocular retinoblastoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.056 PMC6604319-13072_2019_278_MOESM3_ESM.xlsx-CEM_ect_TET2_DEGs_DMRs_hDMRs-Unnamed_4_TET2 Rummagene Transcription Factor Associations 2026 1.0 null NAE1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.1255 PMC7863452-12920_2021_883_MOESM5_ESM.xls-SRG_13_GE2-HCC_vs_17NT-GENENAME_CASZ1 Rummagene Transcription Factor Associations 2026 1.0 null LMNB2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.5744 Extraocular retinoblastoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.039 FAM111B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0549 GREB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.80087 PMC9529122-pone.0274785.s002.xlsx-S1_Table-S1A_Table_Differentially_expressed_genes_in_HeyA8_overexpressin_ZNF521_vs_HeyA8_control_cells_ZNF521 Rummagene Transcription Factor Associations 2026 1.0 null NPAS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.55566 PMC4677459-NIHMS65392-supplement-Dataset3.xlsx-NFKB1-Unnamed_2_NFKB1 Rummagene Transcription Factor Associations 2026 1.0 null ZNF619 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.39886 Lung disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.105 MINPP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.97723 SMG8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.3805 IBTK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.31081 CD37 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.88773 PMC11167905-10194_2024_1805_MOESM1_ESM.xlsx-S6-Table_S6_MR_results_of_brain_eQTLs_and_migraine_NR3C2 Rummagene Transcription Factor Associations 2026 1.0 null SPECC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.44864 ARL11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.29702 Carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.288 496100496_FWM_possible Alzheimer's disease_no TBI_88_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58923 496100421_PCx_probable Alzheimer's disease_TBI_88_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.57286 SMARCA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.24396 APOC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.48605 TFPT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30625 Heart - Atrial Appendage GTEx Tissue Gene Expression Profiles 2023 1.0 1.25835 CMTM6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.67707 SLC27A4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76166 TTLL8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.47942 LIME1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68582 496100294_HIP_possible Alzheimer's disease_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58957 GTF3C3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.38136 PMC8755441-mmc3.xlsx-IRF3-Up-IRF3-Hela_IRF3 Rummagene Transcription Factor Associations 2026 1.0 null SIM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.56181 CALM3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.19596 TUBGCP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.17338 RSL24D1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.55011 MIEF2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.14302 RNASEH2C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.37473 PMC6961462-NIHMS1544104-supplement-Sup_Tab.xlsx-Sup_Table_3_a-Supplementary_Table_3_Genes_Regulated_by_A_MYB_in_Humans_and_Macaques_Bold_genes_with_reduced_expression_in_Group_3_MYB Rummagene Transcription Factor Associations 2026 1.0 null PPP1R3B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.1194 Sebaceous gland disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.621 496100409_FWM_no dementia_TBI_85_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58231 Fallopian Tube GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 Senescence associated secretory phenotype SASP WikiPathways Pathways 2024 1.0 null ZNF326 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.33991 Reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.285 496100361_TCx_no dementia_no TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58797 NUP43 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.65313 NDC80 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.18948 NVL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.16408 ALPK3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.75942 HOXD13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.82436 PLEKHG3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.87973 496100484_FWM_no dementia_no TBI_86_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.5841 Disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.805 PMC11615365-41467_2024_54246_MOESM6_ESM.xlsx-KK47-Numb-KD_vs_Ctr-KD-ensemblGeneId_AR Rummagene Transcription Factor Associations 2026 1.0 null Brain disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.108 SNRPB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56577 Pervasive developmental disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.817 PPP2R3B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.81472 SOX3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.10088 ATG4D CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32228 PMC8160578-JCB_202009147_TableS4.xlsx-MYBL2_targets-Genes_n_532_MYBL2 Rummagene Transcription Factor Associations 2026 1.0 null PMC7445411-CPR-53-e12862-s006.xlsx-Sheet1-Supplementary_Table_S4_Gene_expression_profiling_of_NT-MSC_and_III-MSC_MSC Rummagene Transcription Factor Associations 2026 1.0 null WASL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.22997 Lupus erythematosus DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.232 PPHLN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.25818 ABCC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.61281 TRIM54 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.43293 EIF3H CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.00877 Histone modifications WikiPathways Pathways 2024 1.0 null PMC11639743-mmc2.xlsx-LIN28B-gene_name_LIN28B Rummagene Transcription Factor Associations 2026 1.0 null OPTN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.14013 Alpha thalassemia-X-linked intellectual disability syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.021 NECTIN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.57492 TXNL4B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.16932 ZCCHC8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.09446 GGCX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.84393 CAPN5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.53962 ORMDL3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.99664 HBS1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.67484 ANKRD13A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.25579 PMC2866657-pone.0010547.s001.xls-ERG-high-GENES_UPREGULATED_IN_ERGhigh_ERG Rummagene Transcription Factor Associations 2026 1.0 null PMC10624900-41467_2023_42825_MOESM13_ESM.xlsx-Module_19-TFAP2B_TFAP2B Rummagene Transcription Factor Associations 2026 1.0 null PMC10864182-41588_2023_1596_MOESM4_ESM.xlsx-ST12_Significant_Genes_combine-Unnamed_1_KLF6 Rummagene Transcription Factor Associations 2026 1.0 null PMC12824906-mmc5.xlsx-Sheet1-Table_S4_Target_genes_of_FOXM1_and_their_expression_across_the_subtype_of_breast_tumors_FOXM1 Rummagene Transcription Factor Associations 2026 1.0 null TAF1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.08334 YJEFN3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.10445 Monogenic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.006 PMC3906982-1471-2164-14-830-S1.xlsx-Sheet1-Table_S1_HOXC9-responsive_genes_HOXC9 Rummagene Transcription Factor Associations 2026 1.0 null EME2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.55867 CX3CL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.51665 PI4K2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78769 Skin disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.621 SENP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.65743 496100375_FWM_dementia_no TBI_84_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58685 RPL3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.26927 DLG4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.35561 MON1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.03233 496100412_FWM_possible Alzheimer's disease_TBI_87_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58704 SLC41A3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.62337 PMC7617064-EMS151900-supplement-Extended_Data_Figure_5_Source_Data.xlsx-HSLC_D9_DEG-Logfold_change_threshold_1_0_CENPX Rummagene Transcription Factor Associations 2026 1.0 null LIAS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.59108 Fanconi renotubular syndrome 2 DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.896 Reproductive organ cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.164 PMC7617064-EMS151900-supplement-Figure_7_Source_Data.xlsx-HLC_D9_DEG-Logfold_change_threshold_1_0_1_CENPX Rummagene Transcription Factor Associations 2026 1.0 null PMC10746608-427_2023_709_MOESM4_ESM.xlsx-KLF4_Targets_Enrichment-Unnamed_24_KLF4 Rummagene Transcription Factor Associations 2026 1.0 null RWDD2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.37059 NUBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.79997 ERICH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.91864 DCPS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.64007 B3GNT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.7156 OBI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.86904 Respiratory system cancer DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 TRIP10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.47601 TPRG1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.21875 UBC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.24136 496100346_FWM_no dementia_TBI_81_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.5872 Gastrointestinal system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.212 PMC5848610-supp_gr.228809.117_Supplemental_Table_S4.xlsx-Table_S4A-Supplemental_Table_S4A_Differentially_expressed_genes_upon_ZFX_Knock_down_in_C42B_ZFX Rummagene Transcription Factor Associations 2026 1.0 null SLC18B1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.22639 Male reproductive system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.016 PMC7378211-41598_2020_69015_MOESM3_ESM.xlsx-EWS-WT1_rep1_testp-7_annotatedp-ID_WT1 Rummagene Transcription Factor Associations 2026 1.0 null RDH14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.23408 CHST6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.47802 Male reproductive system disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.915 496100651_FWM_probable Alzheimer's disease_TBI_83_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.01206 TMBIM6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.19775 WDFY2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.44746 PBDC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7422 DNAJC19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.00358 DNAJC8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.51474 PMC8405683-41419_2021_4120_MOESM2_ESM.xlsx-Sheet1-Table_S2_MYCN-responsive_gene_list_1_5_fold_p_0_05_MYCN Rummagene Transcription Factor Associations 2026 1.0 null Skin - Not Sun Exposed (Suprapubic) GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 Respiratory system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.034 UFD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.62864 CRY1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.00716 MRPL53 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.50691 PIEZO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.39211 Carcinoma DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 KIF18B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.40728 496100527_FWM_possible Alzheimer's disease_no TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58645 CKS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02726 Brain - Putamen (basal ganglia) GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 Disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 2.037 Prostate disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.915 COPS4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9512 FOXA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.11827 496100666_HIP_probable Alzheimer's disease_TBI_83_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58955 GINS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.58825 RFT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92393 496100416_FWM_dementia_TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.57583 REP15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.56892 Primary immunodeficiency disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.156 SIPA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.20658 LCN10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.07215 Disease of cellular proliferation DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.69 PMC12824661-BLOOD_BLD-2024-027020-mmc6.xls-Table_S14-HES4_Down_HES4 Rummagene Transcription Factor Associations 2026 1.0 null PMC6996923-elife-46981-supp4.xlsx-KO_Up_Only_Vs_OCT4-Column_ID_POU5F1 Rummagene Transcription Factor Associations 2026 1.0 null PMC6855629-pone.0225186.s008.xlsx-Sheet1-DEGs_upregulated_in_SK-N-SH_MEIS1_OE_MEIS1 Rummagene Transcription Factor Associations 2026 1.0 null GNG11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.45212 Nucleotide excision repair in xeroderma pigmentosum WikiPathways Pathways 2024 1.0 null Disease of mental health DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 2.037 C11orf24 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82446 PFKM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.78668 NDUFB10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.40595 ZNF615 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76773 TENM3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.38436 PMC3470785-NIHMS377161-supplement-14.pdf-109-PDX1_PDX1 Rummagene Transcription Factor Associations 2026 1.0 null 496100426_PCx_no dementia_TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.57543 PMC10200789-41392_2023_1466_MOESM5_ESM.xlsx-TFs_target_genes-Top_100_targetGene_BACH2_BACH2 Rummagene Transcription Factor Associations 2026 1.0 null GOLGA6L4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.69426 OSGIN2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78331 UQCRC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.13407 MMADHC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.86918 ZNF138 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.029 ELOVL4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.91424 Schizophreniform disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.126 SAE1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.08863 Gastrointestinal system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.233 KIF11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.45324 RPL27A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.14839 PMC12019336-41467_2025_58868_MOESM5_ESM.xlsx-Open_peaks_IKAROS_WT-Unnamed_11_IKZF1 Rummagene Transcription Factor Associations 2026 1.0 null PMC10864182-41588_2023_1596_MOESM4_ESM.xlsx-ST12_Significant_Genes_combine-Supplementary_Table_12_Genes_prioritisation_combining_FUMA_MAGMA_Hi-C_MAGMA_and_TWAS_KLF6 Rummagene Transcription Factor Associations 2026 1.0 null TMEM248 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4916 PPIH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89792 POLR1H CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22536 CD164 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.18273 PMC11827247-41065_2025_387_MOESM5_ESM.xlsx-Sheet_1-Only_ESR_ESR1 Rummagene Transcription Factor Associations 2026 1.0 null Lung cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.02 PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-TFDP1_TFDP1 Rummagene Transcription Factor Associations 2026 1.0 null TBCCD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.0653 Autism spectrum disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.817 C16orf54 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.02038 496100323_FWM_possible Alzheimer's disease_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58943 496100378_TCx_probable Alzheimer's disease_TBI_88_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.5885 LKAAEAR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.62675 PMC12062214-41467_2025_59646_MOESM5_ESM.xlsx-HMGA2_activated_repressed-Gene_symbol_HMGA2 Rummagene Transcription Factor Associations 2026 1.0 null IRF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.1051 SMIM13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.30979 Adipose - Visceral (Omentum) GTEx Tissue Gene Expression Profiles 2023 1.0 1.59474 ZNF777 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.0202 Lung cancer DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 496100671_HIP_no dementia_TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58953 TIMM50 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.50593 PRPF19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.28571 FJX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.3347 DPPA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.54405 PMC4823830-ncomms11171-s3.xlsx-high_in_shRNA_GATA3-GeneSymbol_GATA3 Rummagene Transcription Factor Associations 2026 1.0 null PMC11459127-pnas.2406837121.sd04.xlsx-Sheet1-AR_AR Rummagene Transcription Factor Associations 2026 1.0 null Delusional disorder DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.115 PMC12518476-10067_2025_7574_MOESM9_ESM.xlsx-Sheet2-RNAseq_DEGs_of_KD_AR Rummagene Transcription Factor Associations 2026 1.0 null PMC8844187-Table_2.xlsx-prostate-DLX1_DLX1 Rummagene Transcription Factor Associations 2026 1.0 null DNAJC5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89372 ARCN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.59341 PRKACG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.56549 PMC7941712-40478_2021_1135_MOESM12_ESM.xlsx-Table_S4D_DEG_ST-EPN-RELA-Unnamed_6_RELA Rummagene Transcription Factor Associations 2026 1.0 null PMC3912072-pone.0087850.s004.docx-0-List_of_promoters_positive_for_HA-E2F1_1_E2F1 Rummagene Transcription Factor Associations 2026 1.0 null TCERG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.98092 PMC10959942-41525_2024_411_MOESM1_ESM.pdf-11-ZNF292_ZNF292 Rummagene Transcription Factor Associations 2026 1.0 null PXMP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07578 Lung carcinoma DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 GDF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.66694 BAG3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54388 PMC10311050-mmc2.pdf-40-TBX2-AS1_TBX2 Rummagene Transcription Factor Associations 2026 1.0 null Disease of mental health DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.225 ZNF99 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.79758 VKORC1L1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.2824 RTL5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.49487 IMP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.2614 Lymphoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.029 GPKOW CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.03336 SLC38A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44892 SCAMP5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.84098 AP1G2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.58618 CILP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.45811 PMC12518476-10067_2025_7574_MOESM8_ESM.xlsx-Sheet1-Up_regulated_DEGs_of_KD_AR Rummagene Transcription Factor Associations 2026 1.0 null CYP2A13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.65196 NFATC2IP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.58713 ZNF221 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.38987 MPRIP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.38063 COPS6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45468 ZNF789 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.94978 CDCA4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67777 MRPS9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15455 Juvenile pilocytic astrocytoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.256 ARL6IP6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.6275 CCN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.74936 Female reproductive organ cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.011 Endocrine system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.046 ANKRD23 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.27075 DEF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.17436 RASA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.47658 AGPAT4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.57895 NUP54 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37704 IMMT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4008 496100277_FWM_no dementia_no TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58751 496100494_HIP_no dementia_TBI_100+_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58923 LAMB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.21565 PMC7888619-pgen.1009309.s032.xlsx-S9_Table-S9_Table_Predicted_target_genes_of_POU3F2_POU3F2 Rummagene Transcription Factor Associations 2026 1.0 null Hematologic cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.191 MRPL52 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.92764 ZNF35 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.23619 PMC11519470-41467_2024_53624_MOESM1_ESM.pdf-52-TWIST1_TWIST1 Rummagene Transcription Factor Associations 2026 1.0 null PSMC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.70029 Viral infectious disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.008 PMC12522211-NIHMS2104691-supplement-MMC1.xlsx-SRCAP_DE_genes-Gene_SRCAP Rummagene Transcription Factor Associations 2026 1.0 null CSNK1E CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.50465 WDR75 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66063 NDUFV3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.05475 496100466_PCx_probable Alzheimer's disease_no TBI_89_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.57945 FAM168A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.79749 BLMH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.68621 ATP5MC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.48007 Organ system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.649 Integumentary system disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 0.621 KLF7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.14962 GFI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.12159 AP1G1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.85879 PMC12480273-12672_2025_3611_MOESM1_ESM.xlsx-csgene-TP53_TP53 Rummagene Transcription Factor Associations 2026 1.0 null ZNF805 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.19545 TRIP13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60481 Endocrine gland cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.019 OTOL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.27956 TFAP2A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.33212 PLEKHO2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.46508 PSMA7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.55069 PMC6935105-40170_2019_206_MOESM9_ESM.xlsx-HIF1_up_VENN-697_elements_included_exclusively_in_HIF1_genes_HIF1A Rummagene Transcription Factor Associations 2026 1.0 null POU5F1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.64636 NEDD8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.42472 496100403_TCx_probable Alzheimer's disease_TBI_88_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.5888 PMC9376070-41419_2022_5157_MOESM18_ESM.xlsx-Sheet1-Table_S4_Differentially_expressed_genes_of_HNRNPC-KD_and_NC_cells_identified_in_the_RNA-seq_analysis_AR Rummagene Transcription Factor Associations 2026 1.0 null EBF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.71149 INSIG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.95879 ZNF236 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.16187 MRPL39 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.17635 IGFBP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.23219 NOL8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.06877 ATR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.15701 NAA10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.07309 Cell type cancer DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 Cardiovascular system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.093 Funisitis DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.005 SNCB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.36206 ZC3HC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.21757 HOXC6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.1613 CRLF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.05548 LRATD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74053 TADA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.03895 PMC3371315-NIHMS350140-supplement-8.xls-MCF7-T47D-SK-453_Down_MCF7-T47D-Supplementary_Table_1_ER-positive_FOXA1_signature_Genes_decreased_only_in_MCF7_and_T47D_cells_with_knockdown_of_FOXA1_FOXA1 Rummagene Transcription Factor Associations 2026 1.0 null NF1 copy number variation syndrome WikiPathways Pathways 2024 1.0 null SPATA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.99387 PNPLA4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.65159 SLC22A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.74698 Brain - Frontal Cortex (BA9) GTEx Tissue Gene Expression Profiles 2023 1.0 2.26752 ZNF200 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.26374 Autoimmune disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.156 CDH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37933 TTC39C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.04522 Disease of anatomical entity DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.744 PMC2881026-1471-2164-11-292-S9.XLS-LPS-Human_GeneName_1_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Unnamed_13_GATA6 Rummagene Transcription Factor Associations 2026 1.0 null NMD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.54015 ZNF727 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.18388 SAP30BP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45423 PMC6604319-13072_2019_278_MOESM3_ESM.xlsx-CEM_ect_TET2_DEGs_DMRs_hDMRs-CCRF-CEM_EV_vs_ectopic_TET2_TET2 Rummagene Transcription Factor Associations 2026 1.0 null TRAF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.33806 TSEN15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22483 MRPS17 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.84426 Pituitary GTEx Tissue Gene Expression Profiles 2023 -1.0 -1.09638 496100629_HIP_possible Alzheimer's disease_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58956 PMC8758144-elife-74272-supp3.xlsx-AP1_REP1-GeneName_JUN Rummagene Transcription Factor Associations 2026 1.0 null Unilateral retinoblastoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.027 RPL35A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.55306 PMC7378211-41598_2020_69015_MOESM3_ESM.xlsx-EWS-WT1_rep1_testp-7_annotatedp-Gene_Name_WT1 Rummagene Transcription Factor Associations 2026 1.0 null PMC4063835-epi-9-760-s02.xls-MI_vs_NU-SYMBOL_MITF Rummagene Transcription Factor Associations 2026 1.0 null PMC12062214-41467_2025_59646_MOESM5_ESM.xlsx-HMGA2_activated_repressed-Ensembl_ID_HMGA2 Rummagene Transcription Factor Associations 2026 1.0 null PDLIM2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45913 GGN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.47933 CEP164 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.93729 PMC8481886-Table_1.xlsx-A_subsets-iMSC_fetal_MSC_UC_MSC_MSC Rummagene Transcription Factor Associations 2026 1.0 null ARHGAP5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.79696 OLFM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05065 Lung disease DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.38 NHP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.08869 Disease of metabolism DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.072 EXOC8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.3487 DPP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.5964 PMC6742760-41467_2019_12079_MOESM10_ESM.xlsx-Data_S8-Supplementary_Data_8_Target_genes_of_FOXA1-bound_enhancers_FOXA1 Rummagene Transcription Factor Associations 2026 1.0 null SPIN4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68749 FHIP2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.54986 496100367_FWM_no dementia_TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.57776 PMC3419980-leu201249x6.xls-RUNX1-DHS-1000bp-Unnamed_0_RUNX1 Rummagene Transcription Factor Associations 2026 1.0 null Thoracic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.289 Immune system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.034 PMC10746608-427_2023_709_MOESM4_ESM.xlsx-SOX2_targets_enrichment-Unnamed_41_SOX2 Rummagene Transcription Factor Associations 2026 1.0 null Central nervous system disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.306 CCM2L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74786 Cognitive disorder DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 2.037 PMC11615365-41467_2024_54246_MOESM6_ESM.xlsx-KK47-Numb-KD_vs_Ctr-KD-geneSymbol_AR Rummagene Transcription Factor Associations 2026 1.0 null Lymphatic system cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.034 TRAPPC2L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.12221 Genetic disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.301 PMC12518476-10067_2025_7574_MOESM9_ESM.xlsx-Sheet2-intersection_DEGs_of_KD_AR Rummagene Transcription Factor Associations 2026 1.0 null PGLYRP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.24902 THAP7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48022 Developmental disorder of mental health DISEASES Experimental Gene-Disease Association Evidence Scores 2025 1.0 1.817 POLR2D CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.74357 RPS20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.51368 C1orf21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.43724 PMC8384902-mmc2.xlsx-4_NEUROD1_high_subtype-Gene_Symbol_NEUROD1 Rummagene Transcription Factor Associations 2026 1.0 null SOX8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.04978 PIFO CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.66907 ALG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.52304 PMC8384902-mmc5.xlsx-H128_PROX1_ChIP-Symbol_PROX1 Rummagene Transcription Factor Associations 2026 1.0 null 496100551_PCx_no dementia_no TBI_87_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles -1.0 -2.58941 Systemic lupus erythematosus DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.219 PMC10510228-13287_2023_3481_MOESM7_ESM.xlsx-DEGs-Differentially_expressed_genes_DEGs_in_bone_marrow-derived_MSCs_from_six_human_donors_cultured_at_high_confluency_MSC-HC_versus_low_confluency_MSC-LC_MSC Rummagene Transcription Factor Associations 2026 1.0 null PMC8569982-41065_2021_205_MOESM1_ESM.xlsx-mono_THP1_a2b_tpm1-gene_GLI2 Rummagene Transcription Factor Associations 2026 1.0 null DCTPP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.79213 MRPL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.40652 PUS7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.17776 PMC8987207-DataSheet_1.xls-TF_targets_Fig_2A-E2A_Pre-Pro-B-Cells_ChIP-seq_TCF3 Rummagene Transcription Factor Associations 2026 1.0 null HINT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.80654