association	dataset	threshold value	standardized value
NOL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.9248
LoVo cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.938
TTC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.35869
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1767
GSC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6038
GSE121198,GSE129779_0_v_1_arid1a_human	RummaGEO Gene Perturbation Signatures	1.0	null
E2F7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.1905
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0754
496100357_TCx_no dementia_no TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.97039
PMC12289921-41467_2025_62099_MOESM4_ESM.xlsx-MI-2-80-Gene_Symbol_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
Perisynaptic extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.109
Nasopharyngeal cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.942
Skin - Sun Exposed (Lower leg)	GTEx Tissue Gene Expression Profiles 2023	1.0	3.12745
GSE121198,GSE129779_3_v_2_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.348
NAA80	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68067
496100482_PCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.30143
Corona	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.039
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2023	1.0	null
496100374_HIP_possible Alzheimer's disease_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.05008
FOXO1::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9732
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6969
Bpe	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.578
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0605
496100385_TCx_dementia_no TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.35525
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7937
ZKSCAN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3989
ZNF354C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.625
496100402_FWM_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.64422
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.46501
RNA nuclear export complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.734
Intermittent explosive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.131
CTDK-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.63
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7774
PDCD11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36035
ZNF175	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8469
NFYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.345
NKX2-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0331
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.074
FOXO1::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8352
496100660_FWM_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.21465
mRNA editing complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.102
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.2525
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.3812
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6667
THRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.7198
GSE240386,GSE242143_1_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
Perineuronal net	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.112
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1258
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0286
496100349_HIP_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.49897
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9547
Glutaminase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.819
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.8334
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.733
Otopalatodigital syndrome type 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.124
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	116.917
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.062
Microprocessor complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.259
Spliceosome	KEGG Pathways 2026	1.0	null
496100506_PCx_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.17437
Thyroid	GTEx Tissue Gene Expression Profiles 2023	1.0	6.43888
Glial cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.27
PMC12289921-41467_2025_62099_MOESM5_ESM.xlsx-MI-2-80-Gene_Symbol_MITF	Rummagene Transcription Factor Associations 2026	1.0	null
RNA N6-methyladenosine methyltransferase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.125
RNA binding	GO Molecular Function Annotations 2023	1.0	null
OTX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5315
nucleus	GO Cellular Component Annotations 2023	1.0	null
Ribonuclease III complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.233
NFIC::TLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3125
Medulloblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.094
CRD-mediated mRNA stability complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.689
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3399
Terminal loop	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.415
Secretory granule lumen	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.578
synapse-associated extracellular matrix	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.108
GSE240386,GSE242143_1_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
NFYA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6785
GSE240386,GSE242143_8_v_6_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
IKZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3159
Retinitis pigmentosa 11	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.228
496100648_PCx_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.79317
TCP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21386
ht55	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.15
PMC12721900-jci-136-187998-s161.xlsx-Flag-ETS1_vs_vector-Gene_ETS1	Rummagene Transcription Factor Associations 2026	1.0	null
MEX3C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67507
496100297_FWM_possible Alzheimer's disease_TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.31668
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3444
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2761
Supraspliceosomal complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.129
Medulloblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.013
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	8.60813
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6377
496100667_TCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.54043
nucleus	GO Cellular Component Annotations 2025	1.0	null
MOVAS cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.061
496100517_TCx_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.7585
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6562
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6957
496100549_FWM_no dementia_TBI_87_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.47022
PMC10170086-41598_2023_34519_MOESM6_ESM.xlsx-Shee2-The_differentially_expressed_genes_between_the_BARX2_high_and_BARX2_low_group_of_LIHC_patients_BARX2	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF341	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5714
Keratin filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.086
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.7072
TEAD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.0103
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.17342
PK-15 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.132
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2687
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0949
ZNF263	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.5258
GSE160817_7_v_8_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
496100334_PCx_probable Alzheimer's disease_no TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.5377
FOXO1::ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0951
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7138
496100372_HIP_dementia_no TBI_84_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.9562
IRF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.1556
tRNA-splicing ligase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.195
ETV2::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6981
RUNX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0096
496100497_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.31672
Cerebral creatine deficiency syndrome 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.112
intracellular membrane-bounded organelle	GO Cellular Component Annotations 2025	1.0	null
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9704
GAIT complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.698
NP-69 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.139