association	dataset	threshold value	standardized value
COX6B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.14157
WDR26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30413
TMEM14A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45407
GSE176008_7_v_2_azacitidine_human	RummaGEO Drug Perturbation Signatures	1.0	null
SHROOM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4425
FAM83E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85374
CYFIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45773
GSE210101,GSE210114_8_v_3_urod_human	RummaGEO Gene Perturbation Signatures	1.0	null
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.0059
RASSF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05499
MCM5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3264
GSE175787_4_v_10_rhoc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PARP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37344
DDX19A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78267
GSE60217_1_v_0_inosine_human	RummaGEO Drug Perturbation Signatures	1.0	null
NUP85	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23425
GSE165636_0_v_4_tofacitinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE192362_1_v_0_erastin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE60217_1_v_9_inosine_human	RummaGEO Drug Perturbation Signatures	1.0	null
RICTOR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61697
E2F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7551
GSE176008_0_v_2_azacitidine_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE191110_0_v_1_dnajc12_human	RummaGEO Gene Perturbation Signatures	-1.0	null
CDKN1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7847
IFI35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3008
TCF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0865
C11orf71	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.85843
KMT5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.68155
ARHGEF16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.46838
MAD2L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74112
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.3518
DACH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.16373
ATP11C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10424
GSE85565_1_v_0_tcf21_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HOXC11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.50774
CIBAR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06825
PPP1R15B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51714
GSE130437_2_v_3_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE236502_1_v_3_paclitaxel_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-A_ATF4-def_vs_HCT116_ctrl-Supplementary_Table_2A_Contrast_ATF4-def_control_vs_HCT116_control_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
GINS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58825
NFKBIE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.50366
GSE193351_1_v_2_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HPS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06255
TES	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07407
GSE150895,GSE150896_0_v_1_kif15_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE242199_2_v_11_ntrk2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE121866_1_v_3_six4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HAUS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70929
POLD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.53766
SNW1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33929
TRAPPC2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22738
DCUN1D3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-5.54025
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-B_ATF4-def_vs_HCT116_DMSO2-Supplementary_Table_2B_Contrast_ATF4-def_DMSO_2h_vs_HCT116_DMSO_2h_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
RPUSD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.5014
GSE96777,GSE96778_1_v_0_zbtb4_human	RummaGEO Gene Perturbation Signatures	1.0	null
TRAPPC6A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.37116
UBA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48923
RPL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26927
C1R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1182
GSE207514,GSE207515_0_v_3_acetylcysteine_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE233647_4_v_5_docetaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
FAM32A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06535
PMC9253713-mmc3.xls-sufu_KD_HCC1954_DEGs-Unnamed_2_AR	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF75D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8544
PLEKHG6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4159
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-C_ATF4-def_vs_HCT116_DMSO8-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
TSC22D3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15389
PMC10016690-Table_3.xlsx-AKT1_vs_KLF4_deg_all-Significant_DE_genes_in_AKT1_vs_KLF4_meningiomas_KLF4	Rummagene Transcription Factor Associations 2026	1.0	null
ACP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20227
GSE233679_6_v_4_nicotinamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE163240_3_v_4_enzalutamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
WDR83	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07072
ZNF574	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.8396
KCTD10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12814
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.7096
BAG6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10749
GSE239844_7_v_0_crizotinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE228106_3_v_5_paclitaxel_human	RummaGEO Drug Perturbation Signatures	-1.0	null
RAG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28633
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-A_ATF4-def_vs_HCT116_ctrl-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
PTER	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74994
QSOX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04982
NANOGP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52743
ITCH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.31202
TSPAN5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11496
GPRC5C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.50798
CEP135	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.9248
ZNF547	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.762
NEDD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42472
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-F_ATF4-def_vs_HCT116_IGG8-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
PMC12211054-spectrum.00100-25-s0002.pdf-57-CIC_CIC	Rummagene Transcription Factor Associations 2026	1.0	null
EHMT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72785
DCP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33583
ARID3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.85485
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.6899
FTO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89014
ZNF579	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60098
RALBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18362
POLA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19987
RP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23983
GSE207787_1_v_2_pdha1_human	RummaGEO Gene Perturbation Signatures	1.0	null
KIF20B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24101
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.8393
GCDH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90796
GSE152699,GSE152723_0_v_1_vemurafenib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE120612_6_v_5_etoposide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PDCD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.71534
TBCC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77542
AKAP8L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15527
GSE224742_0_v_1_slc1a5_human	RummaGEO Gene Perturbation Signatures	1.0	null
DUSP12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40789
INTS5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.621
GSE76425_0_v_3_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
HNRNPCL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57978
MRPL30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59007
GSE207611,GSE207612_3_v_2_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
F11R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44474
GSE211128_9_v_8_angptl4_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.6325
MAZ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.4248
GSE236486_1_v_2_arnt_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ICE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48102
TNKS1BP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.68712
CRBN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40974
RPL34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21135
PTPRG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.04673
GADD45GIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35177
GSE85995_1_v_0_gata3_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZIC5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	76.6849
CCDC47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54189
GSE148262,GSE150691_1_v_0_hdlbp_human	RummaGEO Gene Perturbation Signatures	1.0	null
GH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61544
PRRC2C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02264
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-F_ATF4-def_vs_HCT116_IGG8-Supplementary_Table_2F_Contrast_ATF4-def_IGG_8h_vs_HCT116_IGG_8h_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
FBL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02571
GSE211357_2_v_0_atg7_human	RummaGEO Gene Perturbation Signatures	1.0	null
ATXN7L3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82286
ZIC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.2353
TMEM86B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.53277
GSE206226_2_v_3_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
ATP6V1D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12517
GSE213588_10_v_1_trametinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.45
CH25H	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.24383
TDRD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57512
GON4L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76766
MED22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63369
PRR29	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.31799
PRKACA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50471
KIAA2013	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30919
ZNF93	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.03727
GSE233647_4_v_6_docetaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
HEXB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.3704
MCRS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.89926
PTK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.38169
GGPS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27174
GSE146982_3_v_2_gpd1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE76425_0_v_7_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC12518476-10067_2025_7574_MOESM9_ESM.xlsx-Sheet4-RNAseq_SJIA_KD_up_inter_AR	Rummagene Transcription Factor Associations 2026	1.0	null
PMC10806738-mmc2.xlsx-Table_S2-Table_S2_Table_of_significantly_adjusted_p-valued_0_05_down-regulated_genes_log2FC_-1_in_MAX-R60Q_transfected_HEK293_cells_relative_to_MAX-WT_transfected_cells_MAX	Rummagene Transcription Factor Associations 2026	1.0	null
MEX3C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67507
EXOSC9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25352
CLK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92089
GSE238116_1_v_0_egr1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HDLBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.11924
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.948
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.653
SOX30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.69155
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-E_ATF4-def_vs_HCT116_Tg8-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
PGRMC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.65435
FAM86B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.1689
GSE233679_12_v_2_nicotinamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BANP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2063
PCNX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34011
PPM1G	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74671
BUB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95555
GSE146982_4_v_1_metformin_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE236502_1_v_0_paclitaxel_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE130715_1_v_0_budesonide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
FOXB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15876
TWIST1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08944
FBXO7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67931
GSE76425_0_v_10_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TTC9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09906
GSE146982_3_v_2_metformin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TNFRSF10B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96283
VPS11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37623
STMN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.90191
GEMIN8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39549
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-E_ATF4-def_vs_HCT116_Tg8-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
TADA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.11714
GSE193351_1_v_9_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE206729_2_v_0_trps1_human	RummaGEO Gene Perturbation Signatures	1.0	null
MRPS26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10685
IRF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24821
TMCO6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46299
SSBP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99245
GSE146982_7_v_1_metformin_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF675	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61733
SLC25A44	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10241
GSE226285_2_v_0_nr0b1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
MGA::EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0313
KCNIP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10602
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5666
ZNF37A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19902
SUCLA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25937
GSE213588_10_v_7_trametinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
POC1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51569
PMC11932929-41388_2024_3264_MOESM4_ESM.xlsx-p_0_05_FC_0_5_n_675-Differentially_expressed_genes_in_MCF7_AR-isolated_BCSCs_after_4_days_GSK591_500nM_AR	Rummagene Transcription Factor Associations 2026	1.0	null
L3HYPDH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31547
TFAP4::ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.4821
KANSL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.72756
GSE221327_4_v_11_clpp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
RUFY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.17783
ZNF480	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1903
GSE112962,GSE112963_2_v_1_ddx5_human	RummaGEO Gene Perturbation Signatures	1.0	null
PSMB10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.08615
SYNGR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86415
NRROS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.64087
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.3598
UQCC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02684
TACC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33962
GSE161800_0_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
FDXACB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60331
IKZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.663
MRPL16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6069
KIF15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25605
DKKL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40502
HIRIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26753
CHERP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	6.39113
TIMM44	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2015
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.4125
PAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7859
NDRG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48143
MORC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57029
COPS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15546
BLTP3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7358
POLR2D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74357
PITPNC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28167
VPS39	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.69057
PPP2R2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16122
FZD9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87516
ERVK3-1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50502
RAB24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50917
TMEM143	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05978
CIB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1548
GSE228106_3_v_4_paclitaxel_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-D_ATF4-def_vs_HCT116_Tg2-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
PPP2R5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.13519
GSE214931_4_v_5_temozolomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.5833
TOPORS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34425
GSE202434,GSE202438_13_v_1_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
CEBPD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78211
MBLAC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78352
PNO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28653
SIPA1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98571
PARL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1966
RFC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.19114
CNDP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28503
GSE214931_1_v_5_temozolomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE114685_1_v_0_grin2b_human	RummaGEO Gene Perturbation Signatures	1.0	null
IPO7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25153
SOCS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20545
EMG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04393
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.2205
ARRDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28005
GSE264621_1_v_6_secretin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
IQCC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87015
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-D_ATF4-def_vs_HCT116_Tg2-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
NHLRC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50583
GSE120612_6_v_3_etoposide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.8251
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.2687
BLOC1S3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63827
ZBTB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30094
CD46	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24435
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1026
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.4087
GSE147626_3_v_1_glutathione_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE233679_6_v_2_nicotinamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ITGB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43173
IER2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47326
NSMCE4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.28146
DPEP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33488
PMC9253713-mmc3.xls-sufu_KD_HCC1954_DEGs-Supplementary_Table_2_Differentially_expressed_genes_upon_knockdown_of_SUFU_compared_to_control_in_HCC1954_cells_Related_to_Figure_3_AR	Rummagene Transcription Factor Associations 2026	1.0	null
OSBPL8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5914
INHBE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34825
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.2284
CAPN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30982
MAML1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.03576
PMC11603793-12964_2024_1953_MOESM1_ESM.pdf-43-TET3_TET3	Rummagene Transcription Factor Associations 2026	1.0	null
ARHGAP12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.89471
RUSC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.19052
LRRN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10268
HMGB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.943
GSE210662_2_v_1_znf165_human	RummaGEO Gene Perturbation Signatures	-1.0	null
TRMT2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.93359
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.8309
MYB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49375
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7885
ALMS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13126
SLC3A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73446
GSE95386_0_v_1_trim24_human	RummaGEO Gene Perturbation Signatures	-1.0	null
SDE2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64627
GSE60217_1_v_8_inosine_human	RummaGEO Drug Perturbation Signatures	1.0	null
CSTF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69405
UBFD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22273
ORC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77766
PLP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1474
MRPS21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93638
GSE164529_0_v_1_tamoxifen_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE60217_1_v_2_inosine_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZBTB8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.61313
RAB33B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41951
CDC6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57379
DENND6A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00139
ATP5MC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.58589
DUSP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.88909
SSR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99906
GSE193258,GSE193259_5_v_13_osimertinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
PTGES3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83307
GSE209911_0_v_1_ncstn_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE120612_6_v_1_etoposide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE214931_1_v_0_temozolomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
RPUSD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4682
GTEx Breast 20-29 vs 70-79	GTEx Tissue-Specific Aging Signatures	-1.0	-3.54629
GLIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.0209
GSE189859,GSE189861_3_v_2_idh1_human	RummaGEO Gene Perturbation Signatures	1.0	null
SPHK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.77247
GET3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76524
ARL16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50677
RNF214	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82647
GSE244518,GSE244520_1_v_0_dnmt3b_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE221327_6_v_11_clpp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE60217_1_v_7_inosine_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZIC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.238
TBC1D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.14097
GSE158182_4_v_0_pnpla3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HEATR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21724
TRAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51755
FDPS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57522
GSE146982_7_v_1_gpd1_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE214931_2_v_5_temozolomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TMSB4X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.70356
NOL8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06877
CD9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30194
SEC22C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.95628
GSTZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22583
POLR1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17547
GSE76425_0_v_12_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NIFK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12525
PTGES2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51623
ZNF479	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59931
GSE233679_12_v_4_nicotinamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-D_ATF4-def_vs_HCT116_Tg2-Supplementary_Table_2D_Contrast_ATF4-def_Tg_2h_vs_HCT116Tg_2h_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF140	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.17874
PSMA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29567
GSE166783_8_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	1.0	null
GSE94849_6_v_5_pinometostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
BTBD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50511
RAB33A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.38675
STRADB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04043
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.3694
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	47.7505
VDAC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04634
DCP1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.82065
GSE193351_1_v_3_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51086
DDB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66356
Hand1::Tcf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.8621
GSE197555_1_v_2_trametinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PNKD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32871
PMC10016690-Table_3.xlsx-AKT1_vs_KLF4_deg_all-Unnamed_4_KLF4	Rummagene Transcription Factor Associations 2026	1.0	null
CHD9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.41985
BORA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18876
Nkx3-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.1548
ACSL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81776
GSE213588_10_v_3_trametinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
FBXO21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.55566
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.7685
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.7606
GSE106661,GSE106665_2_v_3_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ATP2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23321
SSC4D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06439
FAM76B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43072
GSE176008_8_v_1_azacitidine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
MAP2K7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.52192
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.3684
NLGN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.65895
SRM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5487
GSE229580_2_v_3_creb1_human	RummaGEO Gene Perturbation Signatures	1.0	null
TMEM209	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.1705
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.807
COPS6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45468
ZNF559	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31544
GSE233679_5_v_8_nicotinamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
WDR62	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74021
ATP5F1C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46715
TTLL9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.39508
DCAF4L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41864
LMNB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0548
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.7025
AGXT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.49361
CCDC14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06638
RPL35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48372
GRB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.23918
COQ10A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47556
GSE119978,GSE180930_3_v_5_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ATP5MF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26872
ANLN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58428
CHD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.06247
SEMA3B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47475
GSE211151_1_v_0_progesterone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.6518
NOL7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50559
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2344
CHST15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78268
GSE146982_0_v_1_gpd1_human	RummaGEO Gene Perturbation Signatures	1.0	null
EWSR1-FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	112.171
FUS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41381
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-C_ATF4-def_vs_HCT116_DMSO8-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
CYTH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.97257
RPS20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51368
FGF19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11591
GTPBP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21053
GSE264621_1_v_3_secretin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TOMM40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66869
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-B_ATF4-def_vs_HCT116_DMSO2-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-C_ATF4-def_vs_HCT116_DMSO8-Supplementary_Table_2C_Contrast_ATF4-def_DMSO_8h_vs_HCT116_DMSO_8h_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.9424
CLN5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87708
DMRT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53788
GSE60217_1_v_10_inosine_human	RummaGEO Drug Perturbation Signatures	1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-B_ATF4-def_vs_HCT116_DMSO2-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
TRMT5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60689
ZNF549	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.6497
Dmbx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.4928
DR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.52553
ZNHIT6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61802
FSBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33114
GSE87617_1_v_0_ascl1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE221327_10_v_11_clpp_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE193351_4_v_0_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF610	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.2523
GSE193351_1_v_0_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-A_ATF4-def_vs_HCT116_ctrl-Unnamed_2_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
PIK3C2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03017
VAV1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.08002
USP19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27329
GSE108084_3_v_2_epinephrine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE176008_4_v_1_azacitidine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
CFAP418	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.21831
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.2823
CITED4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57055
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4503
SLC9A5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.828
GSE202434,GSE202438_15_v_1_talazoparib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE149035_1_v_0_hepacam_human	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-F_ATF4-def_vs_HCT116_IGG8-Unnamed_1_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
RBMY1A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07616
MED28	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.66742
RCCD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32332
BAIAP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27938
GSE76425_0_v_5_lenalidomide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
TMEM170B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83099
SAP30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.03531
PMC11447041-41598_2024_74391_MOESM2_ESM.xlsx-E_ATF4-def_vs_HCT116_Tg8-Supplementary_Table_2E_Contrast_ATF4-def_Tg_8h_vs_HCT116_Tg_8h_ATF4	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4655
GSE233679_5_v_3_nicotinamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
HLA-B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22845
GSE207787_3_v_2_pdha1_human	RummaGEO Gene Perturbation Signatures	1.0	null
SLC35F5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24593
SPCS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8749
CMC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70546
POU2F3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01146
PMC12518476-10067_2025_7574_MOESM9_ESM.xlsx-Sheet3-RNAseq_SJIA_KD_inter_AR	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF770	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.3568
FAT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36543
SELENON	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60743
FKBP1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65219
PMC12518476-10067_2025_7574_MOESM9_ESM.xlsx-Sheet2-RNAseq_DEGs_of_KD_AR	Rummagene Transcription Factor Associations 2026	1.0	null
SLX1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66862
PRPF4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29125
PROX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11864
ACSM5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37526
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.7245
KDELR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21423
RANGAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.36075
GSE190316,GSE190324_1_v_11_rbm4_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HINFP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.012
GSE193351_4_v_3_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DENR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43861
FCF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03469
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.4585
NAA10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.14553
ZNF205	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01889
OSGEPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07692
GSE207787_1_v_4_pdha1_human	RummaGEO Gene Perturbation Signatures	1.0	null
NR1H3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72757
GSE106661,GSE106665_0_v_3_arid1a_human	RummaGEO Gene Perturbation Signatures	-1.0	null
IFT122	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07693
ADD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.18706
ZFAND5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22678
NFATC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.10041
MESP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.18238
TNPO3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66551
C2CD4C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.1826
TCF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02502
WIZ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10096
ZNRF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50761
GSE150895,GSE150896_0_v_1_enzalutamide_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.3853
RBM19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15643
SLC39A9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71676
RBM42	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04213
CTNNA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4628
PIANP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33597
GSE175787_11_v_10_rhoc_human	RummaGEO Gene Perturbation Signatures	-1.0	null
FERD3L	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9234
RPSA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02556
GSE228106_0_v_1_paclitaxel_human	RummaGEO Drug Perturbation Signatures	1.0	null
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	35.3573
UBE2D2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47407
MYCL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31473
HSD17B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2834
GSE128730_4_v_6_neratinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
CERCAM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31329
NELFE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.72539
FOXH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09914
PGGT1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23757
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.1481
ZKSCAN5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2621
SCOC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.27685
GSE207611,GSE207612_0_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
COQ9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63394
NBN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30776
LMX1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.147
NR1I3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23658
GSE226285_2_v_0_glutathione_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SCAMP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09446
GSE146982_0_v_1_metformin_human	RummaGEO Drug Perturbation Signatures	1.0	null
YWHAQ	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.72045
UTP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90841
MAK16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.52089
SOX18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49156
PPIE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28298
C20orf96	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23072
GSE213588_10_v_12_trametinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
MCM8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.40915
MON1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13805
GSE128730_3_v_6_neratinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
MRS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40603
GSE135439_0_v_1_pax5_human	RummaGEO Gene Perturbation Signatures	1.0	null