association	dataset	threshold value	standardized value
GLIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.3955
NR2C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.951
HCC1171	CCLE Cell Line Gene CNV Profiles	1.0	1.49911
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0127
MZ in posteror frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.04698
ZNF667	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0598
CAKI2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.6167
paracentral lobule, posterior part, right, bank of cingulate sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.45054
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.977078
SG in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.52749
NFIC::TLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.4375
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35171
KM12	CCLE Cell Line Gene Expression Profiles	1.0	1.4675
KARPAS-45	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-DW-5560-01A-01R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MHH-PREB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53281
intracellular organelle part	GO Cellular Component Annotations 2015	1.0	null
H3K4me1_NT2-D1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3486
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	85.6409
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
cuneate nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.481
ZIC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	87.8266
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.4551
H3K4me1_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CHAGOK1	CCLE Cell Line Gene Expression Profiles	1.0	2.44374
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
A2780	DepMap CRISPR Gene Dependency	1.0	2.69038
Six4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.2608
TCF7L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.0062
RKN	COSMIC Cell Line Gene Mutation Profiles	1.0	null
central nuclear group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.13525
paraterminal gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.54377
hypoglossal nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.91642
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827591
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
STAT1_01_21	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	0.8475
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.1812
Npas2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.5891
scalp	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ventromedial hypothalamic nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.80065
Plagl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	123.414
LS513	CCLE Cell Line Gene Expression Profiles	1.0	1.82171
MDAMB361	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.637903
Mafb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	80.3482
paraventricular nucleus of hypothalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.1268
Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A4U1-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
polymorphic layer of rostral subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.33581
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6061
TRIM28	ENCODE Transcription Factor Targets	1.0	null
Lef1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.9436
SETDB1_U2OS_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCIMY7	DepMap CRISPR Gene Dependency	1.0	4.26338
COLO 206F	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.69309
frontal pole, left, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.79952
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.28049
ERF::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.2015
OCIMY5	CCLE Cell Line Gene CNV Profiles	1.0	2.23039
Pou5f1::Sox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	179.319
Prostate adenocarcinoma_PRAD_TCGA-J4-A67Q-01A-21R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
central nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.01876
TBX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0683
HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4867
IRF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3432
Uterine Carcinosarcoma_UCS_TCGA-N8-A4PN-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Smad4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	92.035
MDAMB134VI	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.745149
Lhx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	76.87
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.5574
ERF::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.476
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	76.8171
HESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.233
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.9848
multiform (lateral) division of MD	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.63073
ZNF669	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.85
OCIMY5	DepMap CRISPR Gene Dependency	1.0	4.97845
SP in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.42209
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.627
GATA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.905
ZIC5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.8023
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.7894
496100595_PCx_probable Alzheimer's disease_no TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.36598
FOXO1::ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4087
H3K27me3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
choroid plexus of the lateral ventricle	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.22446
CAL12T	CCLE Cell Line Gene CNV Profiles	1.0	1.38296
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31181
OTX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2922
outer CP in dorsomedial parietal cortex (area 7m)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.986943
Lung adenocarcinoma_LUAD_TCGA-91-6848-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52994
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.295
ZR7530	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.624482
ZNF213	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.1121
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7746
GLIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.3375
Vdr	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.5507
MM1S	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CHD7	ENCODE Transcription Factor Targets	1.0	null
CMK115	CCLE Cell Line Gene CNV Profiles	1.0	2.08639
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6461
RFX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.9963
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	69.8278
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844191
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.982293
CAKI-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
molecular_function	GO Molecular Function Annotations 2015	1.0	null
ZSCAN31	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	79.854
SEM	DepMap CRISPR Gene Dependency	1.0	2.00224
H3K9me3_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CTCF_keratinocyte_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Nkx2-1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.8573
OTX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.889
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-8182-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ARHGDIB_Transfection_GDS4455_551_human_UM-UC-3 bladder carcinoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Collecting duct cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.089
RREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	366.545
protein complex	GO Cellular Component Annotations 2015	1.0	null
ventricular (matrix) zone of cerebellum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.985277
cingulate gyrus, retrosplenial part, right, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.9204
TK	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	122.119
ELF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1565
non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
TP53	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.4651
CTCF	ENCODE Transcription Factor Targets	1.0	null
KMS34	DepMap CRISPR Gene Dependency	1.0	5.93386
NCIN87	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02562
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.672
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0234
ZNF76	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1572
TBX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.1666
CREB3L4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.594
hsa-miR-3165	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	119.292
CA4 field, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.959804
P3HR1	CCLE Cell Line Gene Expression Profiles	1.0	1.53071
Skin	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Nr1h4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	78.0779
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3597
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VAX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6706
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9086
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.908108
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.1646
ZBTB7C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.2605
SET2	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	110.445
NALM-6	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-37-4129-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KURAMOCHI	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52704
IGROV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
intracellular organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
496100499_PCx_no dementia_no TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.31667
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.1678
SPIB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.7419
SET2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LHX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7624
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25248
CL34	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52715
intermediate filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
KLF11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	116.721
Brain Lower Grade Glioma_LGG_TCGA-DH-5140-01A-01R-1470-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	97.5341
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4043
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
ZNF257	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.2615
hsa-miR-4324	TargetScan Predicted Conserved microRNA Targets	1.0	0.766596
TC32	CCLE Cell Line Gene Expression Profiles	1.0	1.65813
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
Hair	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Developmental coordination disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.373
H4C14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28202
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0812
H3K9me3_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-KR-A7K7-01A-11R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE245778_1_v_0_runx1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
OCIM2	DepMap CRISPR Gene Dependency	1.0	4.17825
H3K27me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	328.392
GSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6011
RPE1SS51	DepMap CRISPR Gene Dependency	1.0	2.94022
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	122.279
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70876
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7323
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.208
HCC202	CCLE Cell Line Gene CNV Profiles	1.0	1.46771
Neurod2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	637.942
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.3933
SZ in subgenual cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.927445
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934073
hsa-miR-4320	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	57.9439
VSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8947
inferior olive, principal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.59828
GID complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.144
Hnf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.3555
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.922878
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.2524
SG in dysgranular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.22994
SNU738	CCLE Cell Line Gene Expression Profiles	1.0	1.7264
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	49.8495
Brain Lower Grade Glioma_LGG_TCGA-P5-A5F2-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR3C1-21868756-MCF10A-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
KLF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	125.077
HCC1195	CCLE Cell Line Gene Expression Profiles	1.0	1.40851
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	70.2974
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.859539
496100448_TCx_possible Alzheimer's disease_no TBI_88_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.40719
stratum pyramidale of caudal CA2	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.25135
VZ in posteror frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.877688
MYLA	DepMap CRISPR Gene Dependency	1.0	4.38411
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.579
D341MED	CCLE Cell Line Gene Expression Profiles	1.0	1.48062
AP-2rep	MotifMap Predicted Transcription Factor Targets	1.0	null
Sarcoma_SARC_TCGA-X6-A7W8-01A-21R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inner CP in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.957255
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.109
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20061
PCI-15A	COSMIC Cell Line Gene CNV Profiles	-1.0	-5.12655
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.48438
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33101
SMZ1	DepMap CRISPR Gene Dependency	1.0	2.03628
HCC1143	CCLE Cell Line Gene CNV Profiles	1.0	2.4817
TEAD1	JASPAR Predicted Transcription Factor Targets	1.0	null
SUP-HD1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF354C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.9375
TFAP4::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.0003
hair root	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	111.278
cortico-medial group, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.33603
RARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6489
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	126.494
Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VEZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.6805
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4022
MDAMB157	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.02541
Rectum adenocarcinoma_READ_TCGA-DY-A1DF-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MV411	DepMap CRISPR Gene Dependency	1.0	4.42041
Intraciliary transport particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.786
outer CP in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.866013
RMUGS	CCLE Cell Line Gene Expression Profiles	1.0	1.3544
SNAI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8556
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6786
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6745
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934073
lateral hypothalamic area, tuberal region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.32428
KPNYS	DepMap CRISPR Gene Dependency	1.0	2.76141
TANOUE	DepMap CRISPR Gene Dependency	1.0	2.87425
SHSY5Y	CCLE Cell Line Gene Expression Profiles	-1.0	-1.82903
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	185.849
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37753
VCAP	CCLE Cell Line Gene CNV Profiles	1.0	1.56847
frontal pole, right, inferior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.25641
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.21892
Bladder Urothelial Carcinoma_BLCA_TCGA-G2-A2EL-01A-12R-A18C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4792
subgranular zone of rostral dentate gyrus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.13076
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991797
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5089
COLO680N	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
PRKCG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73376
ETV5::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9852
SNU1076	CCLE Cell Line Gene CNV Profiles	-1.0	-2.10683
SA1-27219007-CHIP-SEQ-ERYTHROID-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
SG in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.36557
KASUMI1	DepMap CRISPR Gene Dependency	1.0	4.53849
ZNF135	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.7859
Brain Lower Grade Glioma_LGG_TCGA-FG-A4MX-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1117
Gli2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	65.3648
TEAD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.4914
SCC-25	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.86452
ZNF740	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	178.974
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A5ST-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	112.203
head	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	130.029
paravermis of cerebellum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.47668
SCC25	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53374
inferior olive, dorsal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.831727
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	120.673
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.593
NCO2	CCLE Cell Line Gene CNV Profiles	1.0	1.89545
CTCF_MCF-7_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	69.8151
Crus II, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.28091
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2528
muscle	GTEx Tissue Gene Expression Profiles	-1.0	-0.835044
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3728
hsa-miR-4692	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
UHO1	DepMap CRISPR Gene Dependency	1.0	5.41308
CTCF_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
outer CP in midinferior temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.40316
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2655
CTCF_H1-hESC_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9617
tuberomammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.14556
NCIH82	CCLE Cell Line Gene Expression Profiles	-1.0	-3.33614
I-II	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.26254
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.54096
CREM	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5654
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
CTCF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	320.29
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3271
laterorostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.51755
medial mammillary nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.01015
ZNF449	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.2225
HEL9217	CCLE Cell Line Gene CNV Profiles	1.0	2.40458
PMC8481886-Table_2.xlsx-A_subsets-AF_MSC_UdRPC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
intracellular non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
H3K9me3_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SUDHL1	DepMap CRISPR Gene Dependency	1.0	3.72823
EGR4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	95.4689
MXD3_02_83	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	4.27798
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	149.369
Stat2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	237.143
Keratinization	Reactome Pathways 2024	1.0	null
IMR32	CCLE Cell Line Gene Expression Profiles	-1.0	-1.86222
hsa-miR-345	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
piriform cortex, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.01972
CP66-MEL	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SETDB1	ENCODE Transcription Factor Targets	1.0	null
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8651
RARB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.1584
Stat5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	96.4712
hsa-miR-4534	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
RXRA::VDR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4545
occipital pole, left, lateral aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.38917
D341Med	DepMap CRISPR Gene Dependency	1.0	5.69626
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29967
Nodular basal cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.244
FEZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.8642
MEF2A	JASPAR Predicted Transcription Factor Targets	1.0	null
intracellular part	GO Cellular Component Annotations 2015	1.0	null
ZNF684	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.343
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04501
SUPT1	DepMap CRISPR Gene Dependency	1.0	2.35072
RPE1SS119	DepMap CRISPR Gene Dependency	1.0	5.30763
cytoskeletal part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.8125
Zfp809	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.6174
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12028
inferior occipital gyrus, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.875088
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.977078
496100591_TCx_dementia_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.5365
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.859539
MCAS	DepMap CRISPR Gene Dependency	1.0	2.91271
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.1933
RMGI	CCLE Cell Line Gene Expression Profiles	1.0	1.85991
lateral hypothalamic area, anterior region, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.48308
TRPS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5223
Mecom	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	121.185
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	98.9336
hsa-miR-1224-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
BCL6-27268052-CHIP-SEQ-BCELLS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
TCF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.3862
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5556
dorsal lateral geniculate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.16214
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	107.427
ZNF384	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	264.52
Prostate adenocarcinoma_PRAD_TCGA-EJ-7788-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
inner SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-3.41236
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.2967
caudal subdivision of paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.885347
TCF12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	91.7839
RMUGS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52167
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	158.829
arcuate nucleus of the hypothalamus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.992762
SNU719	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50408
TEAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.5011
KLF17	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.1479
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	99.3043
496100584_HIP_probable Alzheimer's disease_no TBI_95-99_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.83571
PANC1005	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32919
LC1SQSF	CCLE Cell Line Gene Expression Profiles	1.0	1.59274
CL14	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36426
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A3HZ-01A-11R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A70G-01B-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_NT2-D1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K9me3_U2OS_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
keratin filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1854
HCC1954	CCLE Cell Line Gene CNV Profiles	1.0	1.69717
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.2074
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03797
A704	CCLE Cell Line Gene Expression Profiles	1.0	1.4723
Prostate adenocarcinoma_PRAD_TCGA-HC-7211-11A-01R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MHHCALL2	CCLE Cell Line Gene CNV Profiles	1.0	1.68049
H3K9me3_fibroblast of lung_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
ESRRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9299
ZBTB12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3988
KMS11	DepMap CRISPR Gene Dependency	1.0	2.46308
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.77734
dorsomedial hypothalamic nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.00135
Developmental Biology	Reactome Pathways 2024	1.0	null
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
REST_Panc1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cellular_component	GO Cellular Component Annotations 2015	1.0	null
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19166
496100556_TCx_no dementia_no TBI_87_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.89096
VIIIA, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.33762
COV434	CCLE Cell Line Gene Expression Profiles	1.0	2.15936
H3K9me3_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6061
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7411
MERO83	DepMap CRISPR Gene Dependency	1.0	5.75392
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	78.7534
Brain Lower Grade Glioma_LGG_TCGA-WY-A85C-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	85.65
lateral subdivision of area 9	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.10473
MONOMAC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.96436
SCABER	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33354
Integument	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.603
POU4F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7095
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	94.6
RHOXF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.1509
parabigeminal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.4221
P53-21459846-SAOS-2-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
SNU869	CCLE Cell Line Gene Expression Profiles	1.0	2.35976
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
TEAD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.5719
DPRX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5842
vestibular nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.971926
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5354
Nanog	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	42.8677
precentral gyrus, right, bank of the precentral sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.13276
SKMES1	CCLE Cell Line Gene CNV Profiles	1.0	1.33108
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	150.096
Pancreatic adenocarcinoma_PAAD_TCGA-H6-A45N-11A-12R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
central nucleus of inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.28831
SK-MEL-24	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-3005-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SP9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	87.704
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5888-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-P5-A72X-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
P30OHK	DepMap CRISPR Gene Dependency	1.0	4.05908
IP6K1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79516
skin	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PLAGL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.9937
mammillary body, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.06373
basomedial nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.894633
CORL88	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74902
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.6615
DOV13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25248
NCI-H1436	COSMIC Cell Line Gene Mutation Profiles	1.0	null
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827591
BBSome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.735
CAL33	CCLE Cell Line Gene Expression Profiles	-1.0	-2.40004
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46757
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70348
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.8981
STAT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2453
REH	DepMap CRISPR Gene Dependency	1.0	4.40483
Prdm14	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.8921
Lung adenocarcinoma_LUAD_TCGA-50-5072-01A-21R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HNF4A	JASPAR Predicted Transcription Factor Targets	1.0	null
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ETV5::HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3147
dentate gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.01845
BLOC-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.055
inner CP in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.03164
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	76.8642
PMC9288051-13046_2022_2428_MOESM12_ESM.xlsx-NB4-genes_bound_by_LYL1_at_its_promoter_regions_in_AML_cell_line_NB4_LYL1	Rummagene Transcription Factor Associations 2026	1.0	null
PA-TU-8902	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52994
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.435
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3695
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	154.229
IPC-298	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF_MCF-7_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EHF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.3117
medial geniculate complex, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.19672
ETV5::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8049
Arid3b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	56.7891
HIC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6493
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
frontal pole, right, superior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.60991
RARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.7826
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.4167
SUPHD1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.54161
posterior group of nuclei, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.12224
RBBP5	ENCODE Transcription Factor Targets	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-90-A4EE-01A-11R-A24Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-60-2710-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1143	DepMap CRISPR Gene Dependency	1.0	3.15188
BT549	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.04132
CTCF_HeLa-S3_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF708	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.4405
medial mammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.58449
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.62463
BT20	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.50388
VSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8701
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7403
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H0-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
FLI1::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.7686
epidermis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5066
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.3023
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4278
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0206
GSE150055_0_v_1_melphalan_human	RummaGEO Drug Perturbation Signatures	1.0	null
Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	137.708
Six3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	70.8154
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828489
TEAD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5646
Zic1::Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	710.652
HSC4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75768
Prdm5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	49.4095
HCC2218	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.35768
FOXO1::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.9888
Dmbx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.8889
SREBF1	JASPAR Predicted Transcription Factor Targets	1.0	null
anterior orbital gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.90775
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29G-06A-12R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Rectum adenocarcinoma_READ_TCGA-F5-6811-01A-11R-1830-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NFIB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.8711
cytoskeletal part	GO Cellular Component Annotations 2015	1.0	null
NCI-H847	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.922878
Rectum adenocarcinoma_READ_TCGA-EI-6885-01A-11R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nkx3-2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.18
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12028
ETCC016	DepMap CRISPR Gene Dependency	1.0	2.91595
Bladder Urothelial Carcinoma_BLCA_TCGA-FD-A3N5-01A-11R-A21D-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	69.158
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.857669
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5906
globose nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.23075
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	74.8287
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.3644
intermediate filament cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.3826
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4238
GATA6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.769
ZNF75D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3276
PRPF4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29125
Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7H5-01B-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE111061_1_v_0_tofacitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
KMS27	DepMap CRISPR Gene Dependency	1.0	2.59554
medial habenular nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.959937
KPL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69497
THAP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.3496
REST	ENCODE Transcription Factor Targets	1.0	null
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-1.38034
BCL11A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1852
MAF1_02_81	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.43296
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.3666
septal nuclei, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.14563
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4642-01B-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08217
RUNX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.0005
PMC5358377-pnas.1615015114.sd02.xlsx-Sheet1-genes_with_VDR_peaks_with_and_without_D3_VDR	Rummagene Transcription Factor Associations 2026	1.0	null
TRIM28_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-91-6831-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8644
NCIH2172	DepMap CRISPR Gene Dependency	1.0	2.48802
HES7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7629
MAFK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9812
H3K9me3_Neurosphere Cultured Cells Cortex Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.1697
eGFP-JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.7851
CTCF_WERI-Rb-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXA1-21572438-LNCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.37043
Scalp	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0515
POLR2A	ENCODE Transcription Factor Targets	1.0	null
HUNS1	DepMap CRISPR Gene Dependency	1.0	4.99403
medial habenular nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.86297
JK1	CCLE Cell Line Gene Expression Profiles	1.0	1.42886
COLO201	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4003
Ciliary base	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.91
inner CP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.92881
3M complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.702
SKNO1	DepMap CRISPR Gene Dependency	1.0	5.56005
Lung squamous cell carcinoma_LUSC_TCGA-37-4132-01A-01R-1100-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH522	CCLE Cell Line Gene CNV Profiles	1.0	1.52708
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03797
MYC	ENCODE Transcription Factor Targets	1.0	null
PROP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9094
EB-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
IZ in dorsolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.930475
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.0966
NCIH2029	CCLE Cell Line Gene Expression Profiles	-1.0	-2.09034
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.1324
RFX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.5958
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	72.389
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	342.249
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64391
TK-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09158
posterior orbital gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.32786
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8282
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20061
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916358
JHH-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983465
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4821
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.1406
PANC0213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5924
Epidermis	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
anterior group of nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.855782
subparafascicular nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.03401
DG-75	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HES6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6899
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6925
Kidney renal papillary cell carcinoma_KIRP_TCGA-AL-3466-01A-02R-1351-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IRF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.4211
HDAC1	ENCODE Transcription Factor Targets	1.0	null
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04501
Hand1::Tcf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	281.241
RERFLCSQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59597
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.8531
CA9-22	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H4	DepMap CRISPR Gene Dependency	1.0	5.18819
outer SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.57424
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6051
SEMK2	DepMap CRISPR Gene Dependency	1.0	2.4796
ZBTB26	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3884
HB1119	DepMap CRISPR Gene Dependency	1.0	4.50024
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.1907
EBF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6687
MHH-PREB-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Sarcoma_SARC_TCGA-PC-A5DN-01A-12R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCIH2030	DepMap CRISPR Gene Dependency	1.0	2.08341
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LH-01A-21R-A213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LN-18	COSMIC Cell Line Gene Mutation Profiles	1.0	null
UMRC3	DepMap CRISPR Gene Dependency	1.0	2.19212
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.859539
TBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.8108
cingulate gyrus, retrosplenial part, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.11679
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6587
ZNF682	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.7127
CMK	CCLE Cell Line Gene CNV Profiles	1.0	1.78299
inner SZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.04558
FARAGE	DepMap CRISPR Gene Dependency	1.0	2.18802
X, left, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.49123
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	52.0652
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Mafg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	105.648
posterior hypothalamic area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.61191
JUND	ENCODE Transcription Factor Targets	1.0	null
ELF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.6007
Zfp961	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	191.208
NB7	DepMap CRISPR Gene Dependency	1.0	2.54019
KMS-12-BM	COSMIC Cell Line Gene Mutation Profiles	1.0	null
protein complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
ZNF549	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.7379
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.857669
SP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.75258
SP in midlateral extrastriate cortex (area 19)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.12734
TFAP2E	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.1715
HDAC2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Sox3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	44.0478
IKZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.9159
SPIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6945
H3K9me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
RL	DepMap CRISPR Gene Dependency	1.0	2.80275
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.9315
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2329
DU-145	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.0813
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.2573
Hoxa11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.7304
Lung adenocarcinoma_LUAD_TCGA-97-8552-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JHH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83802
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828489
IZ in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.42694
TUHR10TKB	CCLE Cell Line Gene CNV Profiles	1.0	1.58428
GLIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.2985
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.977078
TFAP2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	175.791
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.3332
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827591
H3K9me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCIH292	CCLE Cell Line Gene Expression Profiles	-1.0	-2.03118
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827591
NKX2-4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.1277
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29688
Hmga1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	178.502
TE-6	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZNF460	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	132.559
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-75-7025-01A-12R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8181
intermediate portion of DFC (area 9/46)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.47838
ETV2::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9776
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4826
SG in posterior frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.875098
inner CP in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.33903
ZNF324	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.8044
TBX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6198
CTCF_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2514
mpkCCD cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.432
superficial layers of caudal presubiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.21939
EZH2_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF85	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.5805
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25248
JUN::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6611
hsa-miR-4277	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.344
TFAP2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	173.774
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.2981
TRIM28_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PITX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3249
Tcf12	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	422.698
VIIAf	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.912093
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	135.541
TALL1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.044
GSC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.072
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.024
HCC95	CCLE Cell Line Gene Expression Profiles	1.0	3.04132
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Jun	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	77.8403
EZH2_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6938-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ELK1::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4242
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.9725
hsa-miR-761	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
NKX2-8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6896
Hand1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	74.9604
Gli1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	66.9485
NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2225
E2F7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6384
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1845
H3K27me3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WSUNHL	DepMap CRISPR Gene Dependency	1.0	2.30506
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8081
HCC1171	CCLE Cell Line Gene Expression Profiles	-1.0	-2.03217
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.7708
PMC8987207-DataSheet_1.xls-TF_targets_Fig_2A-HEB_CCRFCEM_ChIP-seq_TCF12	Rummagene Transcription Factor Associations 2026	1.0	null
interstitial nucleus of Cajal, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.963429
Atf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	61.9994
H3K27me3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15047
EZH2	ENCODE Transcription Factor Targets	1.0	null
FAM83F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.53553
SG in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.983574
PATU8902	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02562
keratin filament	GO Cellular Component Annotations 2015	1.0	null
PROX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5921
GSE193351_4_v_0_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7539
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	78.9193
cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.1347
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	648.288
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18576
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
NCIH69	CCLE Cell Line Gene CNV Profiles	1.0	1.72743
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53281
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52994
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.5279
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2036
layer III of rostral entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.946631
MYC_MCF-7_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CORL279	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74135
Vitiligo	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.144
KLF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	77.8727
HSC-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSU	DepMap CRISPR Gene Dependency	1.0	3.02188
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	81.168
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4167
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52081
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45131
Astrocytoma_CNS - Brain (MMHCC)_GSE4290	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.57519
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	106.283
MCF10F	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-2.04805
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26173
496100433_HIP_probable Alzheimer's disease_TBI_88_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.74923
Ebf4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.0823
pontine nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.5301
KNS-62	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7321
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40192
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
MYC_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cuneus, left, peristriate	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.82933
Hair shaft	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.8
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
MZ in caudal cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.21206
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	197.35
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.2835
MERO25	DepMap CRISPR Gene Dependency	1.0	2.09601
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.5668
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827591
PBX1-22567123-OVCAR3-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
PMC9296003-supp_gad.348982.121_Supplementary_Table_S1.xlsx-PeakCallEPC1-PHF1_H3K27me3_k562-SYMBOL_PHF1	Rummagene Transcription Factor Associations 2026	1.0	null
ESR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	53.7422
PK1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49245
SCC-9	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26267
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.7708
intermediate filament	GO Cellular Component Annotations 2015	1.0	null
NCCSTCK140	CCLE Cell Line Gene Expression Profiles	-1.0	-1.69078
H3K27me3_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-7745-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.8753
SP in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.61089
small intestine	GTEx Tissue Gene Expression Profiles	-1.0	-1.38034
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.7088
NR1D2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2888
EFM192A	CCLE Cell Line Gene Expression Profiles	-1.0	-1.59729
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.4951
midline nuclear complex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.825446
cingulum bundle, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.85315
hsa-miR-4659b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
medial vestibular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10569
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	84.7086
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.4933
Crx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.5273
Scalp	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.124
HS 940.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20314
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YW-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HES2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7211
PBX1	ChEA Transcription Factor Targets	1.0	null
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6061
MAZ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.1581
Sox5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	82.4758
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20061
SNU685	CCLE Cell Line Gene Expression Profiles	-1.0	-1.8192
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	203.837
SCC-9	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hsa-miR-1236	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
HCC1806	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.729622
hsa-miR-2278	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
lateral tuberal nuclei	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.15023
HOXC13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4262
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46821
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	259.09
BHLHE22	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.4216
Bhlha15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	410.668
medial geniculate complex, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.08101
organelle part	GO Cellular Component Annotations 2015	1.0	null
Rectum adenocarcinoma_READ_TCGA-DY-A0XA-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
BT474	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.777295
NKX2-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	80.3934
Rhox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	41.6803
inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06011
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.87235
LBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7631
MZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1566
RCHACV	DepMap CRISPR Gene Dependency	1.0	2.82152
NCIH1436	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50199
H3K4me2_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BARHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.1003
JMURTK2	DepMap CRISPR Gene Dependency	1.0	2.20911
layer II of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.72218
stratum oriens of caudal CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.985042
Prostate adenocarcinoma_PRAD_TCGA-KK-A8I6-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
adipose tissue	GTEx Tissue Gene Expression Profiles	1.0	1.20379
SUDHL1	CCLE Cell Line Gene Expression Profiles	1.0	1.4154
COV362	CCLE Cell Line Gene Expression Profiles	1.0	1.3709
ventricular (matrix) zone of pons	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.45098
dentate nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.48073
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.2674
Y79	DepMap CRISPR Gene Dependency	1.0	3.70338
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827591
basolateral nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.8825
ETV2::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.0644
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.9007
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
P63-20808887-KERATINOCYTES-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Npas4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.9121
pretectal region	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.902794
ZFP42	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	78.875
Ar	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	96.187
SNU878	CCLE Cell Line Gene Expression Profiles	1.0	1.8519
Tbx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	103.237
Isl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.7667
posterior group of nuclei, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.10303
cingulate gyrus, retrosplenial part, left, superior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.949961
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.8852
ZNF692	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.2934
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	135.616
caudal (posterior) extramural migratory stream	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.1587
Hair root	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CORL95	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62321
hair	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Nr1h3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	97.9961
VIIIA, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.866315
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03797
ZNF343	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.9291
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828489
Cornified envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.748
HNF4A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.4428
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.28408
paraventricular nucleus of the hypothalamus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.07162
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
MEOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4541
anterior hypothalamic area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	2.44683
8MGBA	CCLE Cell Line Gene Expression Profiles	-1.0	-1.5507
PBX1-22567123-OVCAR3-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KLF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	101.552
Nr5a1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	73.6042
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3725
CA2 field, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.26994
hsa-miR-3619-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
HCC1395	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.21369
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	85.8175
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.6367
HCC1143	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.563052
CAOV4	DepMap CRISPR Gene Dependency	1.0	2.68432
HG3	DepMap CRISPR Gene Dependency	1.0	3.03412
Zfx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	72.3825
JAR	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	622.284
DOV13	CCLE Cell Line Gene CNV Profiles	1.0	1.43104
IZ in dorsomedial extrastriate cortex (V2)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.33679
Lung adenocarcinoma_LUAD_TCGA-49-6767-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MM1S	CCLE Cell Line Gene CNV Profiles	1.0	1.45599
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860581
HS751T	CCLE Cell Line Gene Expression Profiles	1.0	1.73316
Lhx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	48.9532
SG in ventrolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.33485
IZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.02499
CP in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.16832
ETV2::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.2905
NCIH1618	CCLE Cell Line Gene Expression Profiles	-1.0	-1.9786
doxorubicin_homo sapiens_gpl6947_gse25741	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NPHP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.981
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6687
PECAPJ34CLONEC12	CCLE Cell Line Gene CNV Profiles	-1.0	-2.08421
PMC8481886-Table_1.xlsx-A_subsets-iMSC_fetal_MSC_UC_MSC_bone_marrow_MSC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7951
CTV-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
temporal pole, right, inferior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.957346
Sarcoma_SARC_TCGA-DX-A7ET-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-5522-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3QG-01A-11R-A220-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.933115
MC116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33567
fusiform gyrus, right, bank of cos	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.887553
Wt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	63.9373
Gata3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.737
SIX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.8896
P31FUJ	DepMap CRISPR Gene Dependency	1.0	3.3783
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	203.498
Dlx5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.3978
HS870T	CCLE Cell Line Gene Expression Profiles	1.0	1.41884
SISO	DepMap CRISPR Gene Dependency	1.0	2.1142
RPE1SS48	DepMap CRISPR Gene Dependency	1.0	2.47005
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.51
Ebf2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	58.7804
hsa-miR-4434	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Intraciliary transport particle B	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.911
Brain Lower Grade Glioma_LGG_TCGA-E1-A7Z3-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8797
external granular (germinal) layer of lower rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.902449
CORL51	CCLE Cell Line Gene Expression Profiles	-1.0	-2.193
ZNF175	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.3306
skin	GTEx Tissue Gene Expression Profiles	1.0	2.18987
ZNF341	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7808
integument	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
RL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20314
lateral hypothalamic area, mammillary region, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.87991
HDAC2	ENCODE Transcription Factor Targets	1.0	null
caudal portion of VFC (area 44)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.01919
hsa-miR-214	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2577
Zic3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	988.507
496100524_PCx_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.20244
GSE193351_1_v_0_ruxolitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
H3K9me3_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RL-01A-11R-A18M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0574
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.6189
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	71.7155
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	68.8421
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.5367
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991797
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991797
Esrrg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	64.9693
EGR3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.2178
Nr5a2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	57.9071
mammillary body, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.37966
GABPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.9631
Olig2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	237.833
Bach1::Mafk	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	132.474
CTCF_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZIC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	79.4992
Stat5a::Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	62.9179
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.933115
Tcf21	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	368.124
macromolecular complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934073
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ESR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1102
hsa-miR-4516	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
MFE-319	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Bcl11b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	134.717
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.0299
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54754
HES5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8184
TBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8302
ARGFX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3958
Prdm15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	90.7814
TFCP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0535
Stat4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	91.0317
DBTRG05MG	CCLE Cell Line Gene CNV Profiles	1.0	1.64199
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	147.688
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	83.1656
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.871169
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	77.4513
HEC59	CCLE Cell Line Gene Expression Profiles	1.0	1.9663
FERD3L	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.1202
TT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69711
molecular layer of caudal subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.57683
PL45	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38322
CTCF-20526341-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
TFAP4::ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.3977
ICC9	DepMap CRISPR Gene Dependency	1.0	5.89949
TRAPP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.966
central nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.02008
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4798
POLR2A_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	96.2593
reticular nucleus of thalamus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.13581
ETV2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.5923
midbrain reticular formation, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.79562
IZ in primary auditory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.921359
CHD7_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me2_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2514
YY2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0466
PTEN_01_303	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.614
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.037
hsa-miR-4514	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
VMRCLCD	DepMap CRISPR Gene Dependency	1.0	2.89001
Rfx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	93.1898
LN382	CCLE Cell Line Gene Expression Profiles	1.0	1.46368
COLO 205	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40192
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
IRF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2933
184A1N4	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.22603
PMC9296003-supp_gad.348982.121_Supplementary_Table_S1.xlsx-PeakCallEPC1-PHF1_H3K27me3_k562-ENSEMBL_PHF1	Rummagene Transcription Factor Associations 2026	1.0	null
U343	DepMap CRISPR Gene Dependency	1.0	2.63552
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.2903
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
AML193	DepMap CRISPR Gene Dependency	1.0	2.17922
Keratin-associated protein	InterPro Predicted Protein Domain Annotations	1.0	null
TFAP2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	128.55
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
hsa-miR-3127-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
SNUC1	CCLE Cell Line Gene Expression Profiles	1.0	1.44042
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9907
SP8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	104.274
Thap11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	84.7667
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4274
HEL	CCLE Cell Line Gene CNV Profiles	1.0	1.9879
NR3C1-21868756-MCF10A-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
MYOG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.9181
FLI1::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4832
H3K9me3_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
medial portion of STH	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.21233
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	69.4968
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8324
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.81257
hsa-miR-4531	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6334
Pancreatic adenocarcinoma_PAAD_TCGA-HV-A7OP-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8EC-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE160817_4_v_9_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-8011-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC8384902-mmc5.xlsx-H128_ASCL1_ChIP-Symbol_ASCL1	Rummagene Transcription Factor Associations 2026	1.0	null
RUNX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1058
Intraciliary transport particle A	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.863
HEY1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6365
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2514
Prostate adenocarcinoma_PRAD_TCGA-HC-A8D0-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.8379
3-M syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.301
IKZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.6032
ESRRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4419
Lung squamous cell carcinoma_LUSC_TCGA-63-A5MS-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.0614
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	57.9839
ESX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4637
Nr2e1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	73.8438
VZ in hypothalamic portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.36926
496100470_HIP_possible Alzheimer's disease_TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.48078
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.5872
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.885611
G59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70477
ZNF768	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.5014
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.0588
Ptf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	787.253
hsa-miR-4659a-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
NR3C1	ChEA Transcription Factor Targets	1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.977078
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7336
Atf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.661
Lung adenocarcinoma_LUAD_TCGA-55-6984-11A-01R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RBM45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65375
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38409
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.9642
inner SZ in midlateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.15148
macromolecular complex	GO Cellular Component Annotations 2015	1.0	null
SOX2-21211035-LN229-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
paracentral lobule, posterior part, right, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.29003
8505C	DepMap CRISPR Gene Dependency	1.0	2.24116
MZ in dorsomedial parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0427
XBP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8461
FOXH1-21741376-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
binding	GO Molecular Function Annotations 2015	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-CH-5790-01A-11R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PF382	DepMap CRISPR Gene Dependency	1.0	3.70703
ERF::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8552
CTCF_GM10266_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNAI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6435
TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.5099
Sarcoma_SARC_TCGA-DX-A7ER-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF707	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.3008
MZ in orbital frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.858755
cell part	GO Cellular Component Annotations 2015	1.0	null
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.859539
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10624
SUPM2	CCLE Cell Line Gene Expression Profiles	1.0	1.40065
Head	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
KLF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.5318
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.3725
Twist2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	238.526
upper (rostral) rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.934032
COLO678	DepMap CRISPR Gene Dependency	1.0	2.55675
GRHL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6479
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3995
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7788
paracentral lobule, posterior part, left, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.667
VZ in thalamic region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.01113
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18576
CTCF_MCF-7_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RT112	CCLE Cell Line Gene CNV Profiles	1.0	1.63636
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.5591
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	85.0065
outer portion of lateral ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.32042
HDAC6	ENCODE Transcription Factor Targets	1.0	null
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.8034
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	47.0435
BT-474	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2509
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.8342
NCIH2106	CCLE Cell Line Gene CNV Profiles	1.0	1.85391
TYK-NU	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860581
Spz1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	124.0
GLI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.595
IRF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.256
HS255T	CCLE Cell Line Gene Expression Profiles	1.0	2.25072
cervix uteri	GTEx Tissue Gene Expression Profiles	1.0	0.906545
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29802
hsa-miR-4456	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
lateral habenular nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.14785
H3K9ac_NT2-D1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.828489
Brain Lower Grade Glioma_LGG_TCGA-HW-8319-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COLO792	CCLE Cell Line Gene Expression Profiles	1.0	1.45426
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	55.0904
NHLH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.5746
SHOX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.8982
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	90.4399
ZNF331	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	82.6808
protein binding	GO Molecular Function Annotations 2015	1.0	null
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5853
JVE015	DepMap CRISPR Gene Dependency	1.0	4.69304
MEOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8762
H3K27me3_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843154
NHLH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.1618
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4736
ZNF148	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	113.026
gigantocellular reticular nuclei	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.88293
Acute Myeloid Leukemia_LAML_TCGA-AB-2885-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Zfp335	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	104.714
hsa-miR-4722-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Brain Lower Grade Glioma_LGG_TCGA-P5-A72U-01A-31R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
olfactory bulb	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.21271
Arid5a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	45.6514
MZ in rostral cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.18907
ZNF547	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2357
ZBTB24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.4444
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	77.7681
BLOC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.955