association	dataset	threshold value	standardized value
Cuticle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.694
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040341
VMRCLCD	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76049
PANC0213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50531
hsa-miR-4427	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
PAX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1813
SUZ12	ENCODE Transcription Factor Targets	1.0	null
Colorectum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
HCC2998	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30339
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47936
Skin	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
ZNF708	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4664
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.7538
intracellular part	GO Cellular Component Annotations 2015	1.0	null
Intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
keratin filament	GO Cellular Component Annotations 2015	1.0	null
small intestine	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
SRY	JASPAR Predicted Transcription Factor Targets	1.0	null
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.611
macromolecular complex	GO Cellular Component Annotations 2015	1.0	null
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.24364
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08763
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0485
CHD1	ENCODE Transcription Factor Targets	1.0	null
MYC-19829295-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.897698
Prostate adenocarcinoma_PRAD_TCGA-M7-A724-01A-12R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22652
HSF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1636
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0009
Tcf12	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.2162
H3K9me3_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
hsa-miR-1305	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
NCIN87	DepMap CRISPR Gene Dependency	1.0	2.19435
COLO684	DepMap CRISPR Gene Dependency	1.0	2.71351
UACC893	DepMap CRISPR Gene Dependency	1.0	2.92283
Head	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A6H6-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_erythroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
KM12	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67129
Kidney Chromophobe_KICH_TCGA-KO-8414-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.883278
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
soft tissue	HPA Tissue Protein Expression Profiles	-1.0	-1.28627
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A67Y-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836573
GSE146045_1_v_0_lama3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22652
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08222
Integument	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
HS 940.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30718
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26193
KM-12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51062
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.88226
GATA3-22897851-JUKARTE6-1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040661
organelle part	GO Cellular Component Annotations 2015	1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
rectum	HPA Tissue Protein Expression Profiles	1.0	0.995468
ELK1::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9386
bonemarrow	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	0.933416
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_15_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4838-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35003
RB1_KD_GSE50532_641_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.944144
Large intestine	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
PRPF19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.28571
H3K27me3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-3665	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
H3K9me3_erythroblast_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	25.9421
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.91902
MAFF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6315
RPMI-8866	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56886
KMS26	DepMap CRISPR Gene Dependency	1.0	4.23134
Alimentary canal	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
Bladder	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
D425	DepMap CRISPR Gene Dependency	1.0	2.14173
Hair root	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Perturb_4585_KO_Socs3_SRP074146	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-12.2111
Throat	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041148
hybridization	GeneRIF Biological Term Annotations	1.0	null
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39446
Rectum	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17743
PL45	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34076
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44848
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.0833
NCI-H2804	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08763
RPMI-7951	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02912
PATU8902	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60261
Prostate adenocarcinoma_PRAD_TCGA-G9-6366-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AR-27623747-22RV1-MOUSE-PROSTATE-CARCINOMA	ChEA Transcription Factor Targets 2022	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5402-01A-01R-1503-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
H3K9me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K9me3_H1 Derived Mesenchymal Stem Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Adrenal gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6836
H3K9me3_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5288
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3426-01A-02R-1325-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.36041
NCIH1694	CCLE Cell Line Gene CNV Profiles	1.0	2.06496
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
H3K9me3_G1E_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
OVCAR-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.994529
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5187-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cytoskeletal part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
CDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1223
MHH-PREB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80581
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_14_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835757
Vibrissa	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.829
adipose tissue	GTEx Tissue Gene Expression Profiles	1.0	1.2038
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.6667
Uterine corpus endometrial carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.218
Nymph	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.593
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29767
hsa-miR-4659a-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RW-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RT11284	CCLE Cell Line Gene CNV Profiles	1.0	1.40179
PMC8437976-41416_2021_1470_MOESM2_ESM.xls-List_of_MAF_in_SNP_Rectum-Hugo_Symbol_MAF	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.898241
snoutepidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	2.09859
spleen	HPA Tissue Protein Expression Profiles	-1.0	-1.28627
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.80581
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13203
RARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.087
SCC-9	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.996521
MDAMB361	DepMap CRISPR Gene Dependency	1.0	6.74203
TGIF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9002
3-M syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.289
BLOC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.588
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.07917
hsa-miR-3188	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
DBTRG05MG	CCLE Cell Line Gene CNV Profiles	1.0	1.8605
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CAL12T	CCLE Cell Line Gene CNV Profiles	1.0	1.5666
Sarcoma_SARC_TCGA-K1-A6RT-01A-32R-A33J-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Collecting duct cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.745
embryonic stem no feeder	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-0.948816
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04124
Prostate adenocarcinoma_PRAD_TCGA-VN-A88N-01A-11R-A36G-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KMS18	DepMap CRISPR Gene Dependency	1.0	2.29175
H3K9me3_Colonic Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Trunk	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
ZBTB18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2248
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
Familial woolly hair syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.179
Whole body	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7157
hsa-miR-196a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.2849
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899243
SNU1076	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75549
hsa-miR-4294	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
H3K4me1_olfactory bulb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
intermediate filament	GO Cellular Component Annotations 2015	1.0	null
hsa-miR-3622b-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
hsa-miR-4291	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
skin	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
WFS1_KO_GDS4526_111_mouse_brain	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
tretinoin_homo sapiens_gpl6244_gds4180	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Kidney renal papillary cell carcinoma_KIRP_TCGA-MH-A854-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1673
AR-35650195-DSRCT-HUMAN-MESENCHYMAL-SARCOMA	ChEA Transcription Factor Targets 2022	1.0	null
HNF4A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.7097
hsa-miR-4309	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6938-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4336
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22037
ZNF667	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1754
intracellular non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
HEL	CCLE Cell Line Gene CNV Profiles	1.0	2.22011
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835757
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02912
Prostate adenocarcinoma_PRAD_TCGA-VP-A878-01A-31R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF136	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0359
GP5D	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-A632-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-FG-A4MY-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
derived	GeneRIF Biological Term Annotations	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RJ-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.015
NR1H4::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2857
hsa-miR-4677-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
UMUC10	DepMap CRISPR Gene Dependency	1.0	2.52346
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5077-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Colon	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04258
microscopy	GeneRIF Biological Term Annotations	1.0	null
hsa-miR-375	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94252
A172	COSMIC Cell Line Gene Mutation Profiles	1.0	null
esophagus	HPA Tissue Protein Expression Profiles	1.0	0.995468
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.91955
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
H3K4me3_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A10Q-11A-11R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-2054	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
indirect	GeneRIF Biological Term Annotations	1.0	null
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.897698
SF1_01_271	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.69483
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2558
CL14	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32788
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968991
cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.075222
A_CA_04_2009_7dayMOI-10^6_None_GSE37569	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.84814
Kidney renal papillary cell carcinoma_KIRP_TCGA-IA-A83V-01A-11R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
protein complex	GO Cellular Component Annotations 2015	1.0	null
KYSE-450	COSMIC Cell Line Gene Mutation Profiles	1.0	null
YAMATO	DepMap CRISPR Gene Dependency	1.0	2.27672
Neurod2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	59.7561
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26258
STAT1-17558387-HELA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
hsa-miR-18b	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4775-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9867
keratin filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
situ	GeneRIF Biological Term Annotations	1.0	null
H3K9me3_fibroblast of lung_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60397
SARS-CoV MA15_Day4-PFU-10^5_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.98993
Hair follicle outer root sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.198
MGA::EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.2692
non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
salivarygland	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.21778
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
stomach	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.02932
NCI-H847	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.958223
head	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33398
integument	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-KK-A7AP-01A-12R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12836
hsa-miR-4703-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02593
NPHP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.613
Kidney renal clear cell carcinoma_KIRC_TCGA-CZ-5985-11A-01R-1672-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.346
H3K4me3_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51062
Dermal papilla	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.323
hippocampus	HPA Tissue Protein Expression Profiles	-1.0	-1.28627
OCUBM	DepMap CRISPR Gene Dependency	1.0	6.58328
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.7343
KLM1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12505
SCLC22H	DepMap CRISPR Gene Dependency	1.0	2.64975
NCIH2106	CCLE Cell Line Gene CNV Profiles	1.0	1.74126
Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A5ZZ-01A-31R-A30C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EP300_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
molecular_function	GO Molecular Function Annotations 2015	1.0	null
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44848
Prostate adenocarcinoma_PRAD_TCGA-HC-8213-01A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-J4-8198-01A-11R-2263-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-43-2578-01A-01R-0851-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ELF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2093
OCUB-M	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EEF1G	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-7.82121
U2OS	CCLE Cell Line Gene CNV Profiles	1.0	1.43725
VMRC-RCW	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K9me3_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Urinary system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
studies	GeneRIF Biological Term Annotations	1.0	null
HDAC6	ENCODE Transcription Factor Targets	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3427-01A-01R-0864-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CAPAN1	DepMap CRISPR Gene Dependency	1.0	2.84828
hsa-miR-524-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
Keratinization	Reactome Pathways 2024	1.0	null
intracellular organelle part	GO Cellular Component Annotations 2015	1.0	null
Intraciliary transport particle B	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.544
Lhx8	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	13.362
RFX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5095
SPIB	JASPAR Predicted Transcription Factor Targets	1.0	null
ASPC1	DepMap CRISPR Gene Dependency	1.0	3.00487
GSE111061_1_v_0_tofacitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.944124
Prespliceosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.727
cuticle	GeneRIF Biological Term Annotations	1.0	null
icSARS-Cov_Day4_None_GSE50000	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.73733
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29G-06A-12R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Urinary tract	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
Prostate adenocarcinoma_PRAD_TCGA-HC-A6AN-01A-11R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-VN-A88L-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042036
protein complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
hsa-miR-3192	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
ZR7530	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
Arrector pili muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.822
Brain Lower Grade Glioma_LGG_TCGA-P5-A72U-01A-31R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTNNB1-20615089-FETAL_BRAIN-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.9579
KYO1	CCLE Cell Line Gene CNV Profiles	1.0	1.64275
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SP-01B-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CEBPB-22108803-LS180-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.2011
heart muscle	HPA Tissue Protein Expression Profiles	-1.0	-1.28627
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040421
DU 145	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.09306
JHH7	DepMap CRISPR Gene Dependency	1.0	2.56234
COLO679	DepMap CRISPR Gene Dependency	1.0	3.97702
Lung adenocarcinoma_LUAD_TCGA-49-4505-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08222
SET2	CCLE Cell Line Gene CNV Profiles	1.0	2.04353
SNU387	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74665
cell part	GO Cellular Component Annotations 2015	1.0	null
Uterine Carcinosarcoma_UCS_TCGA-N6-A4VG-01A-31R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Perturb_4586_KO_Socs3_SRP099234	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-12.2111
LU99	CCLE Cell Line Gene CNV Profiles	-1.0	-2.24791
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15962
Prostate adenocarcinoma_PRAD_TCGA-VN-A88O-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HEL9217	CCLE Cell Line Gene CNV Profiles	1.0	2.66875
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	1.0	1.33362
Brain Lower Grade Glioma_LGG_TCGA-E1-A7YU-01A-11R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ONECUT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.2716
immunofluorescence	GeneRIF Biological Term Annotations	1.0	null
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
preoptic	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-2.0362
epididymis	HPA Tissue Protein Expression Profiles	-1.0	-1.28627
TBX19	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.6703
TK-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877016
cellular_component	GO Cellular Component Annotations 2015	1.0	null
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1876
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SC-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7982
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.814
H3K9me3_G1E_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
A-CA-04-2009(H1N1)_Day1_22532695_GSE36328	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.52859
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.7464
TGIF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6174
using	GeneRIF Biological Term Annotations	1.0	null
RUNX1-22897851-JUKARTE6-1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
H3K9me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Sarcoma_SARC_TCGA-X6-A7W8-01A-21R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hair root	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Pheochromocytoma and Paraganglioma_PCPG_TCGA-WB-A81K-01A-11R-A35L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NFIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.8961
G292CLONEA141B1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62596
PMC7291745-12967_2020_2407_MOESM2_ESM.xlsx-Table_S1D_CCF_pairs-locus_PITX1	Rummagene Transcription Factor Associations 2026	1.0	null
hsa-miR-3065-5p	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
Thyroid gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
PGR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0021
hsa-miR-922	TargetScan Predicted Conserved microRNA Targets	1.0	1.45615
Sacrospinalis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.16
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-18a	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
Kidney Chromophobe_KICH_TCGA-KL-8330-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.837294
hsa-miR-4478	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Longissimus thoracis	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.263
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.8933
ZSCAN21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7371
spectrin-associated cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.564
Cornified envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.802
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	53.1263
HT-115	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Esophagus - Gastroesophageal Junction	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21239
Bhlha15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.668
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.0972
NCI-SNU-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MOGGCCM	CCLE Cell Line Gene CNV Profiles	1.0	1.34039
EW-7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
structural molecule activity	GO Molecular Function Annotations 2015	1.0	null
NCIN87	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82538
Abdominal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.992
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4616
hsa-miR-3929	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
mpkCCD cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.088
Brain Lower Grade Glioma_LGG_TCGA-HT-8011-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Ovarian surface epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.599
HSC4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4009
MFE296	DepMap CRISPR Gene Dependency	1.0	4.3872
antibody	GeneRIF Biological Term Annotations	1.0	null
MEF2A	JASPAR Predicted Transcription Factor Targets	1.0	null
KP1N	DepMap CRISPR Gene Dependency	1.0	20.3499
HSF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.489
Prostate adenocarcinoma_PRAD_TCGA-EJ-A65B-01A-12R-A30B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1136
HCC366	CCLE Cell Line Gene CNV Profiles	-1.0	-2.48523
Prostate adenocarcinoma_PRAD_TCGA-YL-A8SO-01B-31R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-HC-7750-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC12358249-supplementary_table_s5_ioaf064.xlsx-DMRT1_-_vs_WT__4_months-Unnamed_1_DMRT1	Rummagene Transcription Factor Associations 2026	1.0	null
hair	GeneRIF Biological Term Annotations	1.0	null
thyroid gland	HPA Tissue Protein Expression Profiles	1.0	0.995468
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.1623
CHLA57	DepMap CRISPR Gene Dependency	1.0	2.61927
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.68243
Sarcoma_SARC_TCGA-X9-A973-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0294
scalp	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1748
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041352
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.2829
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.538
EFM-19	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K9me3_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30339
Mo-B cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.583
NR1D2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.4524
EP300	ENCODE Transcription Factor Targets	1.0	null
hsa-miR-4789-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11948
hsa-miR-4659b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
LS123	DepMap CRISPR Gene Dependency	1.0	3.10746
CMK115	CCLE Cell Line Gene CNV Profiles	1.0	2.23446
CTCF_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung adenocarcinoma_LUAD_TCGA-78-8640-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TGIF2LX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3425
H4K20me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Kidney Chromophobe_KICH_TCGA-KM-8440-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OC314	DepMap CRISPR Gene Dependency	1.0	6.1252
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.76371
hsa-miR-4311	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040826
LNCAP-CLONE-FGC	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney Chromophobe_KICH_TCGA-KO-8409-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Olig2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.7833
intermediate filament cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
epidermis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
TT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50085
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.3463
RL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30718
COLO320	CCLE Cell Line Gene CNV Profiles	-1.0	-2.27729
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64513
GSE226452_1_v_2_imiquimod_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
hsa-miR-3064-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
RORB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3159
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.13487
NR2F1	JASPAR Predicted Transcription Factor Targets	1.0	null
Alopecia areata	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.079
hsa-miR-520d-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.007
Twist2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.8526
MDA-MB-231	COSMIC Cell Line Gene Mutation Profiles	1.0	null
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.944144
hsa-miR-1911	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
ZR-75-30	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.24687
Hair follicle inner root sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.291
G84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833354
3M complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.335
Prostate adenocarcinoma_PRAD_TCGA-VP-A87B-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GATA4-25053715-YYC3-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
AU565	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.837294
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1606
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08763
NR2C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.6577
WFS1_KO_GSE33372_395_mouse_hypothalamus	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.50086
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08222
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3254
intermediate filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.240996
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.55771
PACADD188	DepMap CRISPR Gene Dependency	1.0	2.5171
Urogenital system	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
MHHCALL2	CCLE Cell Line Gene CNV Profiles	1.0	1.7258
hsa-miR-490-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
HCC202	DepMap CRISPR Gene Dependency	1.0	3.57822
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4973-01A-01R-1334-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LEF1-29337183-MESC-MOUSE-STEM	ChEA Transcription Factor Targets 2022	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968065
Uterine corpus cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.143
hsa-miR-1276	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.25669
skin	GTEx Tissue Gene Expression Profiles	1.0	2.18987
Liver hepatocellular carcinoma_LIHC_TCGA-BC-4073-01B-02R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Corneocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.942
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.69967
LS411N	DepMap CRISPR Gene Dependency	1.0	5.73596
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-892b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
hsa-miR-4511	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.40625
RFX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0052
SNU81	DepMap CRISPR Gene Dependency	1.0	3.744
GSE158431_2_v_0_pioglitazone_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835757
MEWO	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NFYB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2887
H3K9me3_G1E-ER4_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.2411
HDAC1	ENCODE Transcription Factor Targets	1.0	null
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.944144
specific	GeneRIF Biological Term Annotations	1.0	null
M-1	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.31887
NKX2-5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6622
H3K9me3_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
kidney	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.8044
FOXP1_01_234	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	1.1011
Hair shaft	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.814
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	1.48247
hsa-miR-466	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Hair	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.55
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.314091
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98973
HDAC6_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Perturb_1295_KO_Trp53_SRP298760	PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations	-1.0	-3.88766
Sarcoma_SARC_TCGA-MB-A8JK-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF157	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.2854
TGIF2LY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1152
PMC12019518-ao5c02459_si_002.xlsx-Table_S3-Table_S3_Screening_of_genes_that_are_commonly_upregulated_in_cells_on_stiff_substrate_and_down-regulated_by_KD_of_UBE2A_B_AR	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70676
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A5SO-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SW626	DepMap CRISPR Gene Dependency	1.0	3.22583
PKNOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2845
SOX17	JASPAR Predicted Transcription Factor Targets	1.0	null
CMK	CCLE Cell Line Gene CNV Profiles	1.0	1.91489
Kidney Chromophobe_KICH_TCGA-KL-8335-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6906-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Large_Intestine-intestinal crypt stem cell of large intestine	Tabula Sapiens Gene-Cell Associations	1.0	0.0
DOV13	CCLE Cell Line Gene CNV Profiles	1.0	1.53774
Epidermis	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
GID complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.776
MM160113	DepMap CRISPR Gene Dependency	1.0	3.4395
embryonic stem feeder layer	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.05296
H3K9me3_G1E_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.046094
ATF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0965
PMC11551467-pnas.2414963121.sapp.pdf-10-ZNF76_ZNF76	Rummagene Transcription Factor Associations 2026	1.0	null
fallopian tube	HPA Tissue Protein Expression Profiles	1.0	0.995468
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2881
RT112	CCLE Cell Line Gene CNV Profiles	1.0	1.78112
CTNNB1	ChEA Transcription Factor Targets	1.0	null
tissues, cell types and enzyme sources	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
chromosomal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045294
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0646
EZH2	ENCODE Transcription Factor Targets	1.0	null
gallbladder	HPA Tissue Protein Expression Profiles	1.0	0.995468
SCS214	DepMap CRISPR Gene Dependency	1.0	3.12478
V-79 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.752
KLM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94252
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.0591
organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
hsa-miR-135a	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
intermediate filament cytoskeleton	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.240636
SUIT2	DepMap CRISPR Gene Dependency	1.0	2.14694
macromolecular complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
hsa-miR-4419b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
PIAS1-25552417-VCAP-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.046569
Keratin-associated protein, PMG type	InterPro Predicted Protein Domain Annotations	1.0	null
SAP30	ENCODE Transcription Factor Targets	1.0	null
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34134
hsa-miR-525-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
epidermis	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	1.0	1.46784
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3954
VCAP	CCLE Cell Line Gene CNV Profiles	1.0	1.74888
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968991
intracellular organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.76321
Gastrointestinal tract	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2044
Brain Lower Grade Glioma_LGG_TCGA-S9-A6TV-01A-12R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-520a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.99952
Uterine Carcinosarcoma_UCS_TCGA-N9-A4Q4-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Scapula	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.301
Gall bladder	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.6391
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.10548
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22984
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.00901
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.65926
Hair	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94252
PL4	DepMap CRISPR Gene Dependency	1.0	3.25189
Hair follicle	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.782
SUPHD1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.85448
Prostate adenocarcinoma_PRAD_TCGA-KK-A6E7-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44848
ATM_KD_GSE54268_662_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.0035
Npas2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.0013
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899243
hsa-miR-2116	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Excretory gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.106
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.1708
TUHR10TKB	CCLE Cell Line Gene CNV Profiles	1.0	1.60358
KLE	CCLE Cell Line Gene CNV Profiles	1.0	1.33701
Prostate adenocarcinoma_PRAD_TCGA-EJ-5516-01A-01R-1580-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-1324	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
Omasum	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.073
SUZ12_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-3198	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
hsa-miR-196b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.898241
H3K9me3_CH12.LX_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
PA-TU-8902	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94252
IKZF1_01_138	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60226
tonsil	HPA Tissue Protein Expression Profiles	-1.0	-0.759163
hsa-miR-4649-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042247
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.989011
Viscus	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29767
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5092-01A-01R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3180-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
Developmental Biology	Reactome Pathways 2024	1.0	null
cytoskeletal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.044504
H3K9me3_iPS DF 6.9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
PLCPRF5	CCLE Cell Line Gene CNV Profiles	1.0	1.41229
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13274
Kidney	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.989011
Uterine Carcinosarcoma_UCS_TCGA-N9-A4PZ-01A-22R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COV413B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26258
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.08771
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968991
SNB75	CCLE Cell Line Gene CNV Profiles	1.0	1.33532
hsa-miR-4708-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
OVKATE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56
Ichthyosis vulgaris	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.1
Hair medulla	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.426
KLE	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4691-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.3277
MEL270	DepMap CRISPR Gene Dependency	1.0	2.23953
Scalp	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
CTNNB1-20615089-FETAL-BRAIN-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
MALME3M	DepMap CRISPR Gene Dependency	1.0	2.65732
hsa-miR-31	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
MEG-01	COSMIC Cell Line Gene CNV Profiles	1.0	2.15316
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22984
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.89844
intermediate filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
hsa-miR-4724-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.100296
OELE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.61321
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98973
PDCD11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36035
hsa-miR-1253	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98973
Longissimus	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.198
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
ovary	HPA Tissue Protein Expression Profiles	-1.0	-1.28627
hsa-miR-135b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.13535
BLOC-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.688
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968065
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02593
Keratin, high-sulphur matrix protein	InterPro Predicted Protein Domain Annotations	1.0	null
H3K4me1_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
demonstrated	GeneRIF Biological Term Annotations	1.0	null
TRAPP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.599
H3K4me3_CH12.LX_mm9_5	ENCODE Histone Modification Site Profiles	1.0	null
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39446
NR2C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2542
duodenum	HPA Tissue Protein Expression Profiles	1.0	0.995468
FAM156B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02947
hair	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Endocrine gland	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
Brain Lower Grade Glioma_LGG_TCGA-DB-A75M-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HCC1534	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.86268
H3K9me3_erythroblast_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
PE01	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17743
cytoskeletal part	GO Cellular Component Annotations 2015	1.0	null
GATA5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4954
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.53329
nih 3T3	BioGPS Mouse Cell Type and Tissue Gene Expression Profiles	-1.0	-1.73768
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33498
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.08895
H3K27me3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH2110	CCLE Cell Line Gene CNV Profiles	-1.0	-1.89536
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02593
Neck	TISSUES Experimental Tissue Protein Expression Evidence Scores 2025	1.0	1.306
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-EJ-7123-01A-11R-1965-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TALL1	CCLE Cell Line Gene CNV Profiles	1.0	2.86734
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.899243
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44848
hsa-miR-1182	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
Prostate adenocarcinoma_PRAD_TCGA-EJ-8468-01A-21R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4735-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
bronchus	HPA Tissue Protein Expression Profiles	1.0	0.995468
H3K27me3_Adult Liver	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
adrenal gland	HPA Tissue Protein Expression Profiles	1.0	0.995468
Usp22_DEPLETION_GDS4973_284_mouse_E14 embryonic stem cells (ESCs)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
nasopharynx	HPA Tissue Protein Expression Profiles	1.0	0.995468
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.882436
Pheochromocytoma and Paraganglioma_PCPG_TCGA-RW-A685-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null