association	dataset	threshold value	standardized value
[Ni-Fe] hydrogenase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.549
posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.868897
KLF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	109.568
primary auditory cortex (core)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.22958
ZNF692	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.0949
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.925841
MUC3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.88505
SPIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.72402
CERS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.49463
ZMYM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34683
TE-15	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
hsa-miR-4476	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4871
Stat5b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.6511
SFRP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41082
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DNA-dependent protein kinase complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.154
SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.554
THAP12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63588
TMEM170B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83099
RBM46	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.53357
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.6974
SG in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	3.34509
anterior (rostral) cingulate (medial prefrontal) cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.7916
TFAP4::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.6208
SP in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06708
ZNF586	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.13583
FOXO4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09267
JUND_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
G28T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826451
ZNF213	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	135.499
UQCC5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.94407
CLINT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78567
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.9168
Keratinization	Reactome Pathways 2024	1.0	null
intracellular non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
BTAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39635
GSE213588_10_v_7_trametinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
PKNOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2928
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
639-V	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PMC8709578-elife-69843-supp2.xlsx-HSF1_KO_2_Ctr-Nearest_Ensembl_HSF1	Rummagene Transcription Factor Associations 2026	1.0	null
SPRED3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41332
Adrenocortical carcinoma_ACC_TCGA-OR-A5K0-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	314.636
MYF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.1676
Lung adenocarcinoma_LUAD_TCGA-50-5049-01A-01R-1628-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-86-8073-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SDHB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31535
Thyroid epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.832
MED19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86343
Skin	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
PHF11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92983
Lung adenocarcinoma_LUAD_TCGA-05-4422-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ILKAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74303
MAPKAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40465
UBA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5184
CTNNA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30397
hsa-miR-2278	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
anterior hypothalamic area, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.16511
Prdm14	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.3249
GSTZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22583
PLK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.63463
chr11_1617008_A_G_b38	GTEx eQTL 2025	1.0	2.73218
KU-19-19	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
ERF::SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4732
Pancreatic alpha cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.046
ZNF768	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.3794
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25183
ES-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44802
LIG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8098
mpkCCD cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.972
VIIIB	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.02529
COLO668	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62085
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7222
posterior group of nuclei, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.938874
periventricular nucleus, preoptic portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.861886
Hair	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
Sox7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	47.2077
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4833-01A-01R-1305-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF75D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6788
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5885-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
striatum_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.20796
H3K27me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-147	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
PLAT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91263
HAND2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.4153
NANP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0558
macromolecular complex	GO Cellular Component Annotations 2015	1.0	null
hsa-miR-4690-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
BHLHE40	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.4043
ARNT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11138
SK-MM-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ABCG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.39236
GORASP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.58064
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.37174
ERF::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.8365
DERL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25177
RNASET2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.42158
RPL14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73105
hippocampus (hippocampal formation)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23178
Brain Lower Grade Glioma_LGG_TCGA-QH-A6X9-01A-12R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SOX13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2902
anterior (rostral) cingulate (medial prefrontal) cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.44283
ARHGEF17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30083
SRRT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12779
Prostate adenocarcinoma_PRAD_TCGA-HC-7745-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-90-6837-11A-01R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19651
Spi1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	78.016
ISG15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.9801
EN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.43891
DCP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19879
ZNF530	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.9837
DHX33	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4612
tuberomammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.32585
Hair follicle outer root sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.674
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1318
TRIM25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.19522
SLC25A39	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.15243
Brain Lower Grade Glioma_LGG_TCGA-FG-5963-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0568
Lung adenocarcinoma_LUAD_TCGA-73-4670-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Grm	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.673
AMO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.862712
ESRP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87661
Zfx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	70.0637
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861681
SP in midlateral extrastriate cortex (area 19)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.19863
ELF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.11084
PODXL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2377
EBF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.464
ATP5ME	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77994
paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.871658
DDX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96359
Adrenocortical carcinoma_ACC_TCGA-OR-A5K5-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.6032
RAD18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.99636
Nr1h2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.5508
medial ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.95845
E2F1	JASPAR Predicted Transcription Factor Targets	1.0	null
ZIC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	213.418
CEMIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.81972
SOX9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4079
ATG9A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11407
Brain Lower Grade Glioma_LGG_TCGA-DU-A7TG-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ETFB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31577
NR6A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.7716
GSE213410_0_v_3_calcitriol_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF281	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	194.528
SCOC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.30805
superior occipital gyrus, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.843401
H3K27me3_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IRF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.449
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	80.0798
TRMT10C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.57922
ZNF418	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.8449
ZEB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.8614
BFTC-905	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
HNF4A	ChEA Transcription Factor Targets	1.0	null
BL-41	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GSE76425_1_v_10_lenalidomide_human	RummaGEO Drug Perturbation Signatures	1.0	null
MRPL53	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50691
H3K4me3_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MET	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98701
Brain Lower Grade Glioma_LGG_TCGA-DU-6396-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
THAP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.6381
dorsal raphe nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.862934
KYSE-140	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
hsa-miR-769-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
MFHAS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.46759
CACNB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86941
ZNF726	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86165
HNF4A-19822575-HepG2-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843306
CD74	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28743
FOXO1::ELK3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.87
PECAPJ34CLONEC12	CCLE Cell Line Gene CNV Profiles	-1.0	-1.87609
SF539	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52666
supramarginal gyrus, right, inferior bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.37906
Spz1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	58.8333
FBXL12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.09807
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2111
MVB12A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38688
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.72437
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5337
CCNB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60058
METTL2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3098
GSE168797_2_v_3_cannabidiol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.0889
G124	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
GABARAPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.2442
FLI1::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.1394
KLF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	70.1018
CELF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.35214
external granular (germinal) layer of lower rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.92485
cerebellar cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.21436
THOP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12682
hsa-miR-3185	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
CCIN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.85855
BHY	CCLE Cell Line Gene CNV Profiles	1.0	1.98574
LNZ308	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55907
ETV5::HOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.3546
BICR31	CCLE Cell Line Gene CNV Profiles	1.0	1.51269
SPRTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.15808
VPS18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47307
TLCD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2262
posterior (caudal) superior temporal cortex (area 22c)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.16277
RBMS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10183
Liver hepatocellular carcinoma_LIHC_TCGA-BC-A69H-01A-11R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bcl11b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.7042
GFI1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92993
lower limb region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.13272
RUVBL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.48033
cuneiform nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.891693
JHOM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56223
ZNF417	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.5896
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-3150b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
NR2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8777
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.4552
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-FF-8043-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0914
H3K27me3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
AKAP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66536
ZNF875	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.08366
lateral nucleus of pulvinar	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.00987
Dux	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.5752
hair	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
IRF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.2116
primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-3.09142
MEIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8392
NAAA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45583
MYOG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	88.18
SOX12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6336
TEX19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19889
FAM3C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59431
Wt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	136.713
NSMF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.31907
CIART	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.64167
primary motor cortex (area M1, area 4)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.894388
SIT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01791
pallidohypothalamic nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.918502
lateral intermediate part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.3263
GLT8D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.00416
cerebellar cortex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.908151
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.566
ELP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.13294
CAKI-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
Msx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.8815
ZFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.07081
CEBPD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1569
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.867
GSE206729_4_v_1_trps1_human	RummaGEO Gene Perturbation Signatures	1.0	null
G22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21262
Kidney renal papillary cell carcinoma_KIRP_TCGA-B1-A656-01A-11R-A31O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ADRA2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17322
Twist2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	172.931
Bladder Urothelial Carcinoma_BLCA_TCGA-GC-A3BM-11A-11R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Dlx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	13.5576
CASTOR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01382
DPPA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78154
ZKSCAN5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.0628
cytoskeletal part	GO Cellular Component Annotations 2015	1.0	null
SF295	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67581
Hand1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.3173
posteroventral (inferior) parietal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.877334
Brain Lower Grade Glioma_LGG_TCGA-HW-7487-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TE15	CCLE Cell Line Gene CNV Profiles	1.0	1.5132
dorsal motor nucleus of the vagus (vagal nucleus)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.10625
Hand1::Tcf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	106.414
TTC30B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89743
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-5083-01A-02R-1420-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2937-03A-01T-0734-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5311
cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
METTL17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3989
GSTK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57886
GSE168797_2_v_5_cannabidiol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
PMC8709578-elife-69843-supp2.xlsx-HSF1_KO_2_Ctr-Gene_Name_HSF1	Rummagene Transcription Factor Associations 2026	1.0	null
MRPL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.56908
CTCF_GM12868_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NPRL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.3863
I-II	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.924038
primary motor cortex (area M1, area 4)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.88009
FOXI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.41143
MAPKAPK5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6722
STAT1_01_21	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	0.9575
SCC25	CCLE Cell Line Gene CNV Profiles	1.0	1.55243
NOC4L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.85456
ZNF189	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.6088
H3K27me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CCNP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71157
Acute Myeloid Leukemia_LAML_TCGA-AB-2858-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PSMB10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08615
MITF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.2993
TMSB4X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33011
TE10	CCLE Cell Line Gene CNV Profiles	1.0	1.60106
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SK-MEL-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50293
GCA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88654
central nucleus of inferior colliculus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.7254
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.0529
MZ in ventromedial extrastriate cortex (VP)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.1548
intermediate filament	GO Cellular Component Annotations 2015	1.0	null
Sox6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.49
Brain Lower Grade Glioma_LGG_TCGA-FG-5965-02B-11R-A29R-07,TCGA-FG-5965-02A-11R-A29R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
supramammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.975791
CASZ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.70972
ASB7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.91669
SSR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78645
BCL11A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.9283
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6834
keratin filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
orbital frontal cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.75153
TAF13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04603
perifornical nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.09881
ZNF16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.93941
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A905-01A-11R-A37O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ETV5::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.4672
inner portion of lateral ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.946305
RFX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6443
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	88.4066
ZDHHC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48274
CYP26A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96036
TTK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.58584
CTCF	ENCODE Transcription Factor Targets	1.0	null
ZMYM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70065
Dlx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	13.8088
striatum_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.864065
skin	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
TBX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1811
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4137
BOLA2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42261
CLN5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.12741
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PSRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48982
GSE151612_0_v_7_pracinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
OCIM1	CCLE Cell Line Gene CNV Profiles	1.0	1.64209
TIRAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.6991
ESYT3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57257
ETS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.698
ZNF549	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.7247
inferolateral temporal cortex (area TEv, area 20)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.02072
RPUSD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13238
gyrus rectus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.920436
MCM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05929
ZSCAN31	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.9759
inferolateral temporal cortex (area TEv, area 20)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.08076
orbital frontal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.915716
ZSCAN23	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.28891
LRP12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55914
MAP3K1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04707
CTCF_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PTK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38169
NABP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51428
SAMD10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.19323
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3045
KYSE30	CCLE Cell Line Gene CNV Profiles	1.0	1.6851
ZNF75A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9327
TE14	CCLE Cell Line Gene CNV Profiles	1.0	1.84057
cortico-medial group, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.888552
Acute Myeloid Leukemia_LAML_TCGA-AB-2874-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
JAG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16874
IRF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2393
MOSMO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.86251
USP51	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.585
CEP152	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09932
ES-2	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
ZNF177	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35904
TSC22D4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27262
Pancreatic adenocarcinoma_PAAD_TCGA-IB-AAUN-01A-12R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A47X-01A-31R-A23W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-A4DV-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-GV-A3QI-01A-11R-A220-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
COPS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21431
CD248	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90024
ABCB6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60441
SPRR2F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.44696
TOMM20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82734
dentate gyrus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.11349
hsa-miR-3919	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.7222
GON4L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76766
NRIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15024
GBF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.55051
Ar	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	34.4472
HSFY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.84704
MZ in inferolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.93642
Acute Myeloid Leukemia_LAML_TCGA-AB-2882-03A-01T-0740-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
MME	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75507
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.252
medial geniculate complex, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.883594
H3K4me1_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ADA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17162
PPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30558
RAD51D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52018
H3K27me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
anterior orbital gyrus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.02482
GSE121824,GSE121826_0_v_3_scaf8_human	RummaGEO Gene Perturbation Signatures	1.0	null
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
GATA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34438
DLG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88401
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98738
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1579
PMC9327205-11658_2022_358_MOESM7_ESM.xlsx-K562-BP1-Symbol_1_DLX4	Rummagene Transcription Factor Associations 2026	1.0	null
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	33.8804
GSE236502_2_v_0_paclitaxel_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2875-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844753
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.86874
NDUFA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89741
EHF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.3028
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53153
ELK1::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0879
Ascl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	337.848
Brain Lower Grade Glioma_LGG_TCGA-FG-8187-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE-510	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
Lung squamous cell carcinoma_LUSC_TCGA-77-A5GF-01A-21R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Wolfram syndrome 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.102
Lung adenocarcinoma_LUAD_TCGA-50-8457-01A-11R-2326-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
MYL6B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.53356
TBC1D4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23705
Sarcoma_SARC_TCGA-QQ-A5VB-01A-11R-A36F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
METTL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22966
NBN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06686
Developmental Biology	Reactome Pathways 2024	1.0	null
ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.974
ZNF544	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98491
Head	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
rostral subdivision of paraventricular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0926
H3K27me3_Rectal Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Intracellular immature spore	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.769
H3K27me3_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF784	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8355
MDA-MB-436 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.945
ZNF100	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91008
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4335-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOSL2	ENCODE Transcription Factor Targets	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5JV-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
caudal subdivision of medial nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.50961
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0738
dorsolateral prefrontal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.24648
RDH10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35328
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.3409
Brain Lower Grade Glioma_LGG_TCGA-S9-A6WE-01A-12R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GAL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44483
OE21	CCLE Cell Line Gene CNV Profiles	1.0	1.89906
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36435
V	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.840173
GOSR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05725
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.6991
ERF::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.889
Tcf12	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	207.402
C1orf74	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27437
SNPH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5406
SCC15	CCLE Cell Line Gene CNV Profiles	1.0	2.45367
FOXA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.8522
VZ in superolateral temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.11467
central nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.38945
Acute Myeloid Leukemia_LAML_TCGA-AB-2996-03A-01T-0735-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GLIS3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	131.332
SNX33	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07934
striatum_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.25579
MRI1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57565
PMC8709578-elife-69843-supp2.xlsx-HSF1_KO_2_E2_30min-Nearest_Ensembl_HSF1	Rummagene Transcription Factor Associations 2026	1.0	null
Scalp	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
SKMEL2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.14082
GSE168797_2_v_0_cannabidiol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZBTB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.5483
Sox3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.3077
GLUD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18756
transverse gyri, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.0389
Brain Lower Grade Glioma_LGG_TCGA-S9-A7R2-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TGFBR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75271
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.90782
GMPR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.03189
dorsolateral prefrontal cortex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.02133
primary somatosensory cortex (area S1, areas 3,1,2)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.20015
JUND	ENCODE Transcription Factor Targets	1.0	null
MAFA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.9187
CLOCK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.22
RORB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1167
outer CP in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.886249
hsa-miR-1234	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
ZIC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	189.076
PE01	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0978
GSE207514,GSE207515_0_v_3_acetylcysteine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF93	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	204.382
CNOT8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.75431
Brain Lower Grade Glioma_LGG_TCGA-DB-A4XC-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Alx4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	15.1567
AHDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73785
Pancreatic beta cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.212
STRADA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02117
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.21783
Lung squamous cell carcinoma_LUSC_TCGA-85-A513-01A-12R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	94.7168
H3K4me3_H1 Derived Neuronal Progenitor Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.875295
hsa-miR-664	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14831
REST	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	140.194
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03884
Rectum adenocarcinoma_READ_TCGA-DY-A1DF-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HS936T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33454
inferolateral temporal cortex (area TEv, area 20)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.475
BAZ1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.46419
PURG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96995
RAB8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40841
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00824
ARID4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81512
H2BK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02322
METTL21EP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6985
GSE196117_6_v_0_clarithromycin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NR2C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.0805
CMTM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.93789
ZNF337	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98863
PSEN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42544
H3K27me3_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NT5DC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.7047
BAG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47474
ZNF524	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1937
PDCD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14861
Brain Lower Grade Glioma_LGG_TCGA-HT-8019-01A-21R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
amygdaloid complex_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.904222
MDAMB415	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43165
AGO4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77238
SEPTIN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.69655
GET3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76524
outer portion of medial ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.46636
inferior frontal gyrus, opercular part, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.02676
DARS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59513
NCOA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.46834
Nucleolar ring	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.218
COLO-818	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19663
Acute Myeloid Leukemia_LAML_TCGA-AB-3009-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19663
TRAPP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.6
caudal presubiculum (postsubiculum)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.890552
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.911411
OE21	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
GABPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	69.9516
Tcf21	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	238.895
TMEM52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.47065
NHLH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.9903
CAPZA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.75392
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1435
CARMIL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05381
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.1294
GLMP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.1701
ZNF146	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.23078
KATO III	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844753
Kidney Chromophobe_KICH_TCGA-KO-8406-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-49-4510-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SMS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28917
FOXP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90057
CP in caudal subicular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.40144
ZNF76	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.9865
III, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.69147
LGALS3BP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87177
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.2566
NFKB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.9386
HCC1195	CCLE Cell Line Gene CNV Profiles	1.0	1.43908
cuneate nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.86855
PATZ1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	167.561
MRPS18B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28162
RHOU	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91677
INTS14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75219
upper limb region of M1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.832287
496100320_PCx_no dementia_TBI_79_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.68846
SG in temporal polar cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.978766
FOXR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82707
CTCF_GM13976_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FLI1::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.487
EPOP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9123
NR1D2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5045
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19651
TNFSF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19886
PDS5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26432
PEX19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2274
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TPRN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19783
EFL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95468
EBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.6983
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38233
Lung adenocarcinoma_LUAD_TCGA-91-7771-01A-11R-2170-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RHOXF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9541
XPO4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81688
BCAN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14498
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.2549
Pancreatic adenocarcinoma_PAAD_TCGA-S4-A8RM-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.0412
Brain Lower Grade Glioma_LGG_TCGA-DU-8166-01A-11R-2256-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IRF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1051
Shox2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.7841
MTREC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.868
MRPS14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.06378
ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.5556
ZBTB24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	93.4082
Elf5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	54.9349
ZNF513	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59128
HOXC9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84266
ZNF274	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.18775
INTS8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15183
epidermis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.831745
VWCE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85919
SG in granular insular cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.2025
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5183-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SP8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	98.6316
ACIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.91029
KLHL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65758
SKMEL5	CCLE Cell Line Gene CNV Profiles	1.0	1.44914
SCAMP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25698
CYB561A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4235
KDSR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78485
Acute Myeloid Leukemia_LAML_TCGA-AB-2944-03A-01T-0740-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF707	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.64174
CACNG6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.60152
SMIM14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15981
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
dorsal thalamus_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.66861
RXRA::VDR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.0
PRR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44314
inner CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.04298
outer SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.06885
MFAP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01174
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.3132
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0652
SHOC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.94487
GSE171572_3_v_2_tp53_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844753
PMC11749115-loae020_suppl_Supplementary_Table_S2.xlsx-CHOP-high-gene_DDIT3	Rummagene Transcription Factor Associations 2026	1.0	null
OCIAD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.66366
USP16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.21003
ZNF546	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76627
RPS6KB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21915
GCM2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.0889
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.5613
POU2AF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84676
Rectum adenocarcinoma_READ_TCGA-DY-A1DD-01A-21R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KYSE-30 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.531
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.908854
ETV4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9895
ETV2::DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.6327
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58255
Crus I, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.58921
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.33316
TCL1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.26253
V, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.30839
mediodorsal nucleus of thalamus_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.31703
R3HCC1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.49923
RARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3478
HOOK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.67357
MAFF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.3822
NFIX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.9396
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.1396
HIC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.821
ZNF182	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.81421
posteroventral (inferior) parietal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.915716
SG in caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.98511
FOXA1_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Collecting duct cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.63
MYOG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.82741
MHH-ES-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
cerebellar cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.71311
BAZ2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73337
spinal (inferior) vestibular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.03871
CTCF_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TRNP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1317
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.7337
HOP-92	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29746
TMEM81	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.32751
Lung adenocarcinoma_LUAD_TCGA-44-A47A-01A-21R-A24H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUSD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34525
HOP62	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37244
hsa-miR-1245	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
TMEM143	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05978
MDA-MB-134-VI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10357
GAK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92231
TEAD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8454
Hic1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.7925
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98943
DNAAF10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68526
Thyroid lymphoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.059
PMC10363146-41598_2023_38681_MOESM1_ESM.pdf-399-GATA6_GATA6	Rummagene Transcription Factor Associations 2026	1.0	null
IKZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.4037
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7755
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.1472
NEXN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.19775
MYOD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.7827
protein complex	GO Cellular Component Annotations 2015	1.0	null
UNC5D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.02985
UQCC6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77618
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.73344
TP53BP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15979
IX	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.00283
GNRH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79704
CCDC136	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.53744
SS18L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6361
PBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.3057
Brain Lower Grade Glioma_LGG_TCGA-FG-A4MW-01A-11R-A26U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hippocampus (hippocampal formation)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.1542
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.908854
nBAF complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.816
DEGS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9081
Lung adenocarcinoma_LUAD_TCGA-55-7227-01A-11R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
integument	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ZNF630	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.58705
Brain Lower Grade Glioma_LGG_TCGA-S9-A7IQ-01A-21R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
OSR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.9215
EPLC-272H	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
ZNF684	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.8163
midbrain reticular formation	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.11884
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1529
laterodorsal part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.34348
ZNF705B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.73113
MAFF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43808
temporal pole, left, inferior aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.23823
JHUEM3	CCLE Cell Line Gene CNV Profiles	1.0	1.35873
SP1	ENCODE Transcription Factor Targets	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5264-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ASF1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24605
IZ in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.957722
CREBBP_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SPIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.7322
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1589
Lung adenocarcinoma_LUAD_TCGA-05-4249-01A-01R-1107-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXO1::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.2317
rostral division of OFCi (area 11)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.55205
globose nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	3.26578
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82481
Rhox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.0
paracentral lobule, posterior part, right, bank of cingulate sulcus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-3.30959
NR1I3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.4879
CHAC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63885
S117	CCLE Cell Line Gene CNV Profiles	-1.0	-1.72143
ETV5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.05633
CTCF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23693
EHMT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.88258
MTRF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.33284
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
ELF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.7904
RPS9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1491
IFT140	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45131
IX, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.12519
HELZ2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27127
MRPL52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.06382
A-498	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.02083
ATXN7L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44808
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8463
Erg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	74.3257
ARMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66715
Brain Lower Grade Glioma_LGG_TCGA-HT-7472-01A-11R-2027-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.0947
SEC61A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63642
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32605
SFXN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81513
CCNYL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.34759
Nr1h3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.6302
ZNF263	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	102.662
POU6F2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.13804
ZBTB7C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.3756
RPS5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59842
Sarcoma_SARC_TCGA-IS-A3KA-01A-11R-A21T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nfatc1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.4608
NCI-H460	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98943
CNEP1R1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6736
lateral posterior nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.833649
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.161
ATP1A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.25545
BPH-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NPHP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.615
SK-MEL-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44767
Bladder Urothelial Carcinoma_BLCA_TCGA-BT-A20P-01A-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NUF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43648
GSE229344_2_v_0_cyb5r3_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ERF::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.8589
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9628
CRYBG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00492
GPATCH8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32921
SNRPB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56577
ZFP14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	83.6131
3M complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.336
amygdaloid complex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17572
ATF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.5523
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.3913
G112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25183
RARA::RXRG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6823
Liver hepatocellular carcinoma_LIHC_TCGA-CC-A7IE-01A-21R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NHERF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.30984
hsa-miR-876-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
TNNT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.8067
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.862712
ZNF331	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.8664
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0529
ZNF157	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.4478
TEX10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18246
CENPV	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.24541
USP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73945
Prostate adenocarcinoma_PRAD_TCGA-HI-7169-01A-11R-2118-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7681
SSC4D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95999
ZDHHC13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00998
Arx	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	20.1464
WDHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74242
KLF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.6155
IRS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32762
Liver hepatocellular carcinoma_LIHC_TCGA-CC-5263-01A-01R-A131-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
496100533_TCx_possible Alzheimer's disease_no TBI_90-94_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.00485
VIIAf	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.09107
Rectum adenocarcinoma_READ_TCGA-AG-3732-01A-11R-1660-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5201-01A-01R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-91-8497-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Rfx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	80.5519
FBXO11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30108
FUT10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.56152
NUP42	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60224
ETV2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.4206
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.4215
Rectum adenocarcinoma_READ_TCGA-AG-3725-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCF12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	79.7713
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4154
Omegae	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.064
RPN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4224
striatum_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13682
ZNF770	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.3702
MEWO	CCLE Cell Line Gene CNV Profiles	1.0	1.38659
medial habenular nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.35038
KCTD9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.87357
PLEKHA3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55012
RECQL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.64004
ZIC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.13596
hippocampus (hippocampal formation)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.27406
Lung adenocarcinoma_LUAD_TCGA-97-8172-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
medial mammillary nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.81923
ZBTB4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35796
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
NSMCE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74991
VZ in hypothalamic portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.2779
Nfe2l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.0386
intermediate filament cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
Brain Lower Grade Glioma_LGG_TCGA-DU-A76K-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DDX5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.52068
TCF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	78.5623
MTFR1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.39872
Logical memory (delayed recall) in mild cognitive impairment	GWAS Catalog SNP-Phenotype Associations 2025	1.0	0.669897
HUP-T4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03321
Olig2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	177.41
RFXANK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.37208
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-HM-A6W2-06A-22R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PAICS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32621
MATR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84093
NCIH647	DepMap CRISPR Gene Dependency	1.0	2.00426
SW 1990	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21695
keratin filament	GO Cellular Component Annotations 2015	1.0	null
parabigeminal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.17551
C2BBE1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.866081
VEZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	88.9512
CDCA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35432
hsa-miR-3121-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
MEIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0647
choroid plexus of the lateral ventricle	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.01997
GALNT3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.01449
MNDA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08121
UBAP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86936
medial subdivision of central nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.12145
MDA-MB-175-VII	COSMIC Cell Line Gene Mutation Profiles	1.0	null
E2F3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.82451
COL4A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8447
orbital frontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.864012
CAL-39	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.65334
CNNM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33087
SP1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ascospore-type prospore	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.802
ZBTB26	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.6116
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GSE111061_1_v_0_tofacitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ARHGAP12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.89471
VIIB	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.952917
outer CP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.78775
SNAI2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.4303
STAT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1207
Ikzf3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	71.284
PMC7462863-41467_2020_18186_MOESM13_ESM.xlsx-Suppl_Data_11-Supplementary_Data_11_Driver_genes_NOT_found_in_the_Mongolian_cohort_compared_with_previous_HCC_studies_NR4A2	Rummagene Transcription Factor Associations 2026	1.0	null
ZBTB12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6843
RPL35A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.55306
Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EIF5AL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60724
GSE123105,GSE124556_0_v_2_pcf11_human	RummaGEO Gene Perturbation Signatures	1.0	null
RAP1GAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37367
SNUPN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77579
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1529
SELENOH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2081
outer SZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07162
RELB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9872
LEPROTL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99473
layer IIIa of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.944994
TBX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	88.4852
hsa-miR-4264	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
ZNF324	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0147
TMEM178A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.34535
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RPL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26927
Brain Lower Grade Glioma_LGG_TCGA-S9-A7IY-01A-11R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
anterior (rostral) cingulate (medial prefrontal) cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.77127
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
H2BC12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79144
IM-95	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TFAP2A	ChEA Transcription Factor Targets	1.0	null
Zfp809	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.3465
COQ8A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.51311
Dlx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	17.8776
E2F6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.9105
Zic3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	607.753
KCTD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08328
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46208
NAA50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28522
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.39945
GLIS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	158.576
PSPC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12143
FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5753
H3K27me3_kidney epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MPV17	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51393
Lung squamous cell carcinoma_LUSC_TCGA-NK-A5D1-01A-11R-A26W-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.6227
EGR4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.54
subgenual (subcallosal) division of MFC (area 25)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.856711
primary somatosensory cortex (area S1, areas 3,1,2)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14063
ZNF274	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0634
Pancreatic adenocarcinoma_PAAD_TCGA-IB-A5SP-01A-11R-A32O-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
2313287	DepMap CRISPR Gene Dependency	1.0	2.08502
CASKIN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17446
primary motor cortex (area M1, area 4)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.54018
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39991
WDR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12395
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843306
FOSL2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MBTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.93107
Nr1h3::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.4618
YIPF6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.26022
Bladder Urothelial Carcinoma_BLCA_TCGA-C4-A0F6-01A-11R-A10U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
INTS12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.03548
FAM86B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20864
MMP25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41682
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-JX-A5QV-01A-22R-A28H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
INSM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	128.75
DUX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41819
NCOA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5472
Adrenocortical carcinoma_ACC_TCGA-OR-A5JG-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A7PW-01A-11R-A352-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE151612_4_v_7_pracinostat_human	RummaGEO Drug Perturbation Signatures	1.0	null
Lung adenocarcinoma_LUAD_TCGA-55-1592-01A-01R-0946-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE216273,GSE216292_0_v_8_palbociclib_human	RummaGEO Drug Perturbation Signatures	1.0	null
HS 294T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
Brain Lower Grade Glioma_LGG_TCGA-DU-A7TI-01A-11R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VI, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.59327
Nobox	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	14.9737
SCAF8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.93853
Nfat5	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.6096
Zbtb2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.7154
Uterine Carcinosarcoma_UCS_TCGA-NF-A4WU-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ETV5::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.0571
XBP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2989
SPIB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	92.3262
HNRNPCL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8028
TXN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67179
RGPD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59529
PRR14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.3301
ZNF675	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	84.9505
LMO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.65476
BICR22	CCLE Cell Line Gene CNV Profiles	1.0	1.94518
BTF3L4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.13999
VWDE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81369
RAPH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.89707
IL13RA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71068
FEM1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62015
CGTHW1	CCLE Cell Line Gene CNV Profiles	1.0	1.32902
AHSA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73438
IRF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40249
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	31.65
ZNF707	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	118.35
GTF2F1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2033
ETV7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.1061
Nr2e3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	16.0
hippocampus (hippocampal formation)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.17832
primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.944433
inferolateral temporal cortex (area TEv, area 20)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.940177
BHY	DepMap CRISPR Gene Dependency	1.0	2.01218
Sarcoma_SARC_TCGA-DX-A6YR-01A-33R-A355-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TEAD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.8577
MMUT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83024
Keratin filament	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.906
SP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.828198
CTCF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	183.716
NFKB1	JASPAR Predicted Transcription Factor Targets	1.0	null
primary visual cortex (striate cortex, area V1/17)_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.44861
ALG10B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82563
primary somatosensory cortex (area S1, areas 3,1,2)_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.49246
XPC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.39745
BHLHE41	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6463
USF1	ENCODE Transcription Factor Targets	1.0	null
NCBP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08643
GSE233679_5_v_7_nicotinamide_human	RummaGEO Drug Perturbation Signatures	1.0	null
CTCF_LNCaP clone FGC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SCC-25	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50293
ZIC5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	135.731
MARK4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21363
FOXA1	ENCODE Transcription Factor Targets	1.0	null
POLR1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7009
MDAMB453	CCLE Cell Line Gene CNV Profiles	1.0	1.34383
GSE213410_2_v_3_calcitriol_human	RummaGEO Drug Perturbation Signatures	1.0	null
ZNF667	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.911
GLIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	131.366
ZNF154	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65156
FARSA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37292
Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PLAGL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.9931
HS 69ST	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924787
BHLHE22	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.878
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
SOX15	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.851
MEST	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44312
ETV5::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.0201
RELA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4444
ANXA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0636
TLCD5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41366
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6332
Prdm4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.1914
amygdaloid complex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.04757
primary auditory cortex (core)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.76036
VIIIB, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.71068
TFAP2E	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.4035
ERF::NHLH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.0942
TIMM8B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.55384
ITPRIPL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02385
ZNF814	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.44935
EZH2	ENCODE Transcription Factor Targets	1.0	null
CEBPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4957
H3K27me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GCM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.9692
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.2485
GID complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.778
KLF12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32199
RNF115	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.37104
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.86803
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A706-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16563
Bladder Urothelial Carcinoma_BLCA_TCGA-E5-A4U1-01A-11R-A31N-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LIPT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0767
Nance-Horan syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.099
VI, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.61467
medial portion of STH	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.833469
Sox1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	36.2799
Kidney renal papillary cell carcinoma_KIRP_TCGA-DW-5560-01A-01R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TFEC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.4516
RFX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.6626
LEMD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.42314
Brain Lower Grade Glioma_LGG_TCGA-HT-A5R7-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hair root	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ZDHHC22	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65323
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4352-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-S5-AA26-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LDLR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.38523
CEBPE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47669
posteroventral (inferior) parietal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.88407
Brain Lower Grade Glioma_LGG_TCGA-HW-8319-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
LBX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36953
CREM	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.0695
Pancreatic adenocarcinoma_PAAD_TCGA-LB-A7SX-01A-11R-A33R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	54.5
CISD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82219
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50908
anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.36727
KU1919	CCLE Cell Line Gene CNV Profiles	1.0	1.64187
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZNF528	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.8653
HCC1806	COSMIC Cell Line Gene Mutation Profiles	1.0	null
C6orf62	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61602
ZNF669	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.065
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8645
Brain Lower Grade Glioma_LGG_TCGA-VM-A8CF-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Kagami-Ogata syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.117
GSE173201_2_v_1_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
layer III of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.71076
NFU1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46613
EZH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.85496
USF1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TUBA4A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.4928
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5859
hsa-miR-510	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	163.107
CCDC69	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99977
ZNF316	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.23651
MZ in dorsomedial parietal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.87642
IRF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5004
GMIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88218
WARS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.43527
U-937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0567
GSE207514,GSE207515_2_v_3_acetylcysteine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NHLH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.5082
GSE226249_2_v_1_pirfenidone_human	RummaGEO Drug Perturbation Signatures	1.0	null
IL17RA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34198
ZNF175	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.9417
NCI-H1915	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13944
NDOR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.70715
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.005
Gli2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.8744
ETV2::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.5565
EPHA8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17454
Liver hepatocellular carcinoma_LIHC_TCGA-DD-A1EJ-01A-11R-A155-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ANKRD30A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35754
SHOC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15622
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28715
hsa-miR-3665	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
XPNPEP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.81745
primary auditory cortex (core)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.84984
Rarg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	114.735
STK38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97623
TSTD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59125
Lung adenocarcinoma_LUAD_TCGA-78-7162-01A-21R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TFAP2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	196.837
RNF227	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92939
TUBA1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	6.15339
H3K4me1_iPS DF 19.11	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ARSK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.0095
DCAF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.24964
DMS-53	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
PPP1R13B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14417
Wrinkly skin syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.558
KMS20	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67203
cytoskeletal part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
macromolecular complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
GSE85880,GSE85881_4_v_1_tretinoin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03989
Brain Lower Grade Glioma_LGG_TCGA-F6-A8O4-01A-11R-A36H-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ATF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7306
Runx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	122.044
GPR161	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.77095
LUC7L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.01096
VIIB, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.53473
LAMC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06184
Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5888-01A-11R-1592-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CTSA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.50148
GPBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.72518
CREB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7582
Lung adenocarcinoma_LUAD_TCGA-64-1681-01A-11R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
layer VI of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.01817
Neurod2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	346.378
NCI-H2023	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.988345
KLF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	90.7858
KYSE140	CCLE Cell Line Gene CNV Profiles	1.0	2.22874
TULP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32894
H4K20me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CREBBP	ENCODE Transcription Factor Targets	1.0	null
organelle part	GO Cellular Component Annotations 2015	1.0	null
Gfi1b	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.1198
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70581
FAM83E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85374
temporal pole, left, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.66774
Zic1::Zic2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	356.717
MYL6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4111
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0932
SH3PXD2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2961
Kidney Chromophobe_KICH_TCGA-KL-8327-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9445
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.76164
Kidney Chromophobe_KICH_TCGA-KO-8409-01A-11R-2315-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RPS8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41909
TDGF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59059
COLO680N	CCLE Cell Line Gene CNV Profiles	1.0	1.43751
THRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.2912
Keratin-associated protein	InterPro Predicted Protein Domain Annotations	1.0	null
ZNF184	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.885
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
pedunculo(pontine) tegmental  nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.40995
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25183
CACYBP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.00997
Lung adenocarcinoma_LUAD_TCGA-86-8281-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.011
TFAP2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	231.724
KLHL15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14912
ZNF143	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.157
CML-T1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
lateral orbital frontal cortex (area 12/47)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.03335
INO80E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.05386
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Rarb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	79.5699
PLAGL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33175
RPL13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.19015
EGR3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	81.4654
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.988345
Rectum adenocarcinoma_READ_TCGA-F5-6465-01A-11R-1736-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
VIIIA, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.34997
TAF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.36951
Disease	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.042
DNAJA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.37701
TJAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.14245
SARDH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27187
preoptic region, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.944764
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46929
Bladder Urothelial Carcinoma_BLCA_TCGA-DK-A1AA-01A-11R-A13Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SNAI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2865
ZBED4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33042
HCE-4	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
CCNDBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.42455
HOXC12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28406
ZXDA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34383
Crus II, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.934356
FAN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45107
Hair root	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.185
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.9538
VIIB, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.8998
NEUROG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.4028
H3K27me3_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NKX6-2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.76716
RCCD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.12788
Hair shaft	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.505
Lung adenocarcinoma_LUAD_TCGA-91-6835-01A-11R-1858-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF454	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	302.231
H2AFZ_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VI	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.12919
MOR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98943
GSE135350_2_v_5_dexamethasone_human	RummaGEO Drug Perturbation Signatures	1.0	null
Ebf4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	124.217
GSE76425_0_v_10_lenalidomide_human	RummaGEO Drug Perturbation Signatures	1.0	null
IV, right, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.953825
SOX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1826
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.0804
Nr1h4	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	38.8334
Pheochromocytoma and Paraganglioma_PCPG_TCGA-QR-A708-01A-11R-A35K-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TPRG1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21938
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2793
FOXJ2::ELF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.0038
BLOC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.589
FOXN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.89058
Lung adenocarcinoma_LUAD_TCGA-44-7669-01A-21R-2066-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
mediodorsal nucleus of thalamus_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.953513
KP1N	DepMap CRISPR Gene Dependency	1.0	2.0092
DMRTA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9693
H3K4me2_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-TM-A7CA-01A-21R-A33Z-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4533	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
GSE196343_1_v_0_metformin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SPART	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.84878
Acute Myeloid Leukemia_LAML_TCGA-AB-3001-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MALME3M	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58753
ZNF254	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50485
GSE160304,GSE163392_2_v_3_zswim8_human	RummaGEO Gene Perturbation Signatures	1.0	null
SNAPC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0677
CRNKL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.81045
THBS3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21487
Tbx6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.0262
PCDHB6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17642
cerebellum_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.02907
Kidney renal clear cell carcinoma_KIRC_TCGA-AK-3461-01A-02R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
RARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.0399
CLOCK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95777
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5038
DNASE2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.70778
POLR3F	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25646
ETV5::FOXO1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.6153
hsa-miR-4760-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4718-01A-01R-1277-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXA3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.2039
ELF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.3967
superior colliculus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.95832
intracellular organelle part	GO Cellular Component Annotations 2015	1.0	null
NFYB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6812
internal segment of globus pallidus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.6964
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03321
Plagl1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	110.774
medioventral part of putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.12834
hsa-miR-299-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
CTCF_fibroblast of villous mesenchyme_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19651
KYSE510	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.2432
ES2	CCLE Cell Line Gene CNV Profiles	1.0	2.43249
Prostate adenocarcinoma_PRAD_TCGA-HC-8265-01A-11R-2263-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PROSER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.78656
FGF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17104
primary auditory cortex (core)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.940177
SLU7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10788
CCDC59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83665
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39991
Hair medulla	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.311
COPS7B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04076
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	1.0	1.33891
MDN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.06107
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17743
medial portion of the shell	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.902342
Brain Lower Grade Glioma_LGG_TCGA-HT-A74H-01A-11R-A32Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
CFAP126	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.90657
Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A9FF-01A-11R-A38B-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MZ in rostral midinferior temporal cortex (area 36)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.16045
Acute Myeloid Leukemia_LAML_TCGA-AB-2817-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08694
FUCA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4052
CAL29	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3354
MAZ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	83.1853
CTCF_Caco-2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Lung squamous cell carcinoma_LUSC_TCGA-22-A5C4-01A-12R-A27Q-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SUMO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43279
Nr2f6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	112.444
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.68927
RARB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6288
TSPYL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.36989
ZNF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.07763
GTF2H2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96385
RUSF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27116
GSE186440,GSE186443_0_v_5_daxx_human	RummaGEO Gene Perturbation Signatures	1.0	null
HNRNPUL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.99017
ZFAND6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31598
Pancreatic adenocarcinoma_PAAD_TCGA-IB-AAUT-01A-11R-A37L-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A1BN-01B-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-JX-A3PZ-01A-11R-A32Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
FOXR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40446
FOXO1::FLI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.5202
anterior (rostral) cingulate (medial prefrontal) cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01731
CSPG5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15309
AUNIP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3116
inferolateral temporal cortex (area TEv, area 20)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.19721
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SJSA1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.07321
hsa-miR-764	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
ETS2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7605
Brain Lower Grade Glioma_LGG_TCGA-CS-6188-01A-11R-1896-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF708	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	154.376
Lung adenocarcinoma_LUAD_TCGA-53-A4EZ-01A-12R-A24X-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE85880,GSE85881_0_v_1_tretinoin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ARX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.33457
primary visual cortex (striate cortex, area V1/17)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.3593
anterior nucleus of pulvinar	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.837523
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76883
parasubicular cortex (parasubiculum)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.941525
H3K27me3_iPS-20b	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SG in primary somatosensory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.836931
chr11_71610590_G_A_b38	GTEx eQTL 2025	1.0	1.46562
emboliform nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.15578
ETV2::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	83.3018
CRLF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8717
SBK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.79252
MUC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20149
anterior (rostral) cingulate (medial prefrontal) cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.14241
CAND1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.89167
SOCS6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00165
CREB3L4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.7434
TM9SF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69191
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.4768
SECISBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98255
PPIL3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5369
MED20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99742
SOCS7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.80192
GSE168602,GSE168604_2_v_1_selumetinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
primary visual cortex (striate cortex, area V1/17)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17572
CREB3L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6686
ZKSCAN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7469
METTL9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.162
MTLN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.509
IKZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.663
HOXD12::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6624
posteroventral (inferior) parietal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.22265
ARMCX6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36355
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.80758
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.4836
PTMS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01618
HCN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.92884
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
intracellular part	GO Cellular Component Annotations 2015	1.0	null
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.908854
YME1L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.25816
MCF7	DepMap CRISPR Gene Dependency	1.0	2.04439
PMC8481886-Table_2.xlsx-A_subsets-AF_MSC_UdRPC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
IZ in dorsolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.37874
EPC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04907
ZBTB7A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4194
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.02122
SKN	DepMap CRISPR Gene Dependency	1.0	2.04759
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.8409
Arid3a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.3333
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.37923
LIN7B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.56587
SLC2A4RG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.84013
SLC1A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36409
CRB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12061
PRSS35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2806
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08694
IRF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32567
TOM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80321
orbital frontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	3.4231
MYL9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63909
hsa-miR-3918	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
Lung adenocarcinoma_LUAD_TCGA-50-5045-01A-01R-1628-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NFKB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.0958
Ppara	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.7102
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EA-A1QT-01A-11R-A14Y-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GSE208350_4_v_1_fgfr1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
ZCCHC8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00722
H3K4me1_iPS DF 6.9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Adrenocortical carcinoma_ACC_TCGA-OR-A5LJ-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bladder Urothelial Carcinoma_BLCA_TCGA-CF-A27C-01A-11R-A16R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
PMC6744561-41467_2019_12125_MOESM7_ESM.xlsx-Normal_309_TCF7_rep1_sorted_pea-Gene_Name_TCF7	Rummagene Transcription Factor Associations 2026	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29G-06A-12R-A18T-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39875
KMS-12-BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968678
non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
CAR-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03884
nucleus of Darkschewitsch, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.48015
PMC8709578-elife-69843-supp2.xlsx-MIX_Ctr-Nearest_Ensembl_MIXL1	Rummagene Transcription Factor Associations 2026	1.0	null
inferolateral temporal cortex (area TEv, area 20)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.10451
hsa-miR-1178	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
PMC8709578-elife-69843-supp2.xlsx-HSF1_KO_2_E2_1h-Nearest_Ensembl_HSF1	Rummagene Transcription Factor Associations 2026	1.0	null
HOXB5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90726
TFAP2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	241.323
MYC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52177
WDR45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.49866
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
H3K9me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.4866
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.23084
Acute Myeloid Leukemia_LAML_TCGA-AB-2927-03A-01T-0740-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ES2	DepMap CRISPR Gene Dependency	1.0	2.05247
VZ in midcingulate neocortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.825955
Lung adenocarcinoma_LUAD_TCGA-55-8090-01A-11R-2241-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Bhlha15	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	226.587
ML1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45515
NCI-H1395	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
OSR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.5544
Hair root	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
SIKE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.67664
Lung adenocarcinoma_LUAD_TCGA-97-7553-01A-21R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.7407
KCNK15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00196
HYOU1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.76707
Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1ZR-06A-21R-A18U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
YJEFN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22884
CTCFL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	107.902
ENDOG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5815
Thap11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	51.1409
EVI5L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.59944
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17743
Lung adenocarcinoma_LUAD_TCGA-97-8171-01A-11R-2287-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
AMFR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.93165
intermediate filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
FOXP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.69504
ZNF682	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	65.8941
H3K27me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
MSL complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.919
hsa-miR-4654	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
MTMR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.89212
cingulum bundle, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.35856
TFAP4::ETV1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.2221
RUNX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.231
BCL6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.4303
NDRG3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53593
COLO-800	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6907-01A-11R-2213-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
SOX15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.21095
PAXIP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26876
PMC8709578-elife-69843-supp2.xlsx-MIX_E2_1h-Nearest_Ensembl_MIXL1	Rummagene Transcription Factor Associations 2026	1.0	null
Brain Lower Grade Glioma_LGG_TCGA-HT-8113-01A-11R-2404-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3801
NFIB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.0265
hsa-miR-3545-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
Prospore membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.804
primary motor cortex (area M1, area 4)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.34959
TRNT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.88178
polymorphic layer of rostral subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.64783
A498	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46646
Lung squamous cell carcinoma_LUSC_TCGA-43-6771-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Lung adenocarcinoma_LUAD_TCGA-73-4675-01A-01R-1206-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
EPLC272H	CCLE Cell Line Gene CNV Profiles	1.0	2.03004
GSE155031_6_v_7_dextran_human	RummaGEO Drug Perturbation Signatures	1.0	null
GPR150	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60993
451LU	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
Intraciliary transport particle B	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.545
MIER2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.93204
SLC38A5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23545
Hair follicle inner root sheath	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.937
primary auditory cortex (core)_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.850599
Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6938-11A-01R-1915-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ventrolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.07336
ANKEF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35823
PYGM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.16814
GSR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.09111
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.8151
NKX2-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.2255
organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
C11orf86	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45681
Uterine Carcinosarcoma_UCS_TCGA-N6-A4VD-01A-11R-A28V-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KCNIP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30725
Integument	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
IRF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.2559
paracentral lobule, posterior part, right, lateral bank of gyrus	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-2.32473
Irf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	50.3301
YY1	JASPAR Predicted Transcription Factor Targets	1.0	null
NFS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63666
TAF7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40154
SKMEL28	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76456
anterior (rostral) cingulate (medial prefrontal) cortex_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.5731
hippocampus (hippocampal formation)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.08807
HS 695T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.826451
PABPC1L2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.88186
PL-21	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03492
Brain Lower Grade Glioma_LGG_TCGA-HT-7856-01A-11R-2403-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
stratum oriens of rostral CA1	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.848487
Sarcoma_SARC_TCGA-SI-AA8C-01A-11R-A38C-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19663
J82	DepMap CRISPR Gene Dependency	1.0	2.0181
Crus II, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.34754
WDR89	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.19429
dorsolateral prefrontal cortex_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.1908
SEC14L5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86735
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58255
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	58.4431
NME4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28139
POLR3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2642
inferolateral temporal cortex (area TEv, area 20)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.39726
NUSAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80935
RER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.58459
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MU-A5YI-01A-11R-A32P-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
NR2C2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.64996
midbrain reticular formation, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.74012
TATDN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30294
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55664
Lung adenocarcinoma_LUAD_TCGA-78-7158-01A-11R-2039-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
MutS complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.015
dorsomedial hypothalamic nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-0.954711
POLR2M	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90446
MED24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.04093
primary auditory cortex (core)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.917194
SOX14	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1917
hsa-miR-5096	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
temporal pole, right, medial aspect	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.79864
TMEM229A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75062
HES2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3148
SENP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5584
pineal body	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.27751
ALAS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.01487
TLR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30346
SOX21	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3695
RASA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47658
VI, left, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.842838
Gli1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.0944
HINT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71813
medial preoptic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.51942
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2132
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.967643
E2F7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.88793
TE-10	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
ZBTB7B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0112
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4342-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TOX3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.64595
SNAP47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.2326
TMC8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26793
HOXB2::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.8665
ZNF596	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.36412
C15orf39	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00018
hsa-miR-3188	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
ZKSCAN3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	57.8429
Crus I, right, lateral hemisphere	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.2893
ZNF677	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.5623
MZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.26019
TEAD4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.0116
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82697
hsa-miR-1298	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
NANS	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.96245
PPIP5K1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71387
hsa-miR-4534	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.2992
BMP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60462
Sox17	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	32.9757
SNU1079	CCLE Cell Line Gene CNV Profiles	1.0	1.70214
ZBED4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	110.57
ARHGAP11A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60718
Lung adenocarcinoma_LUAD_TCGA-86-6851-01A-11R-1949-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
KLF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	66.0449
KDM4D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04613
GLI3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	92.8022
TRNAU1AP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.62095
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	88.8332
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-IR-A3LF-01A-21R-A22U-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	75.759
Acute Myeloid Leukemia_LAML_TCGA-AB-2857-03A-01T-0736-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
GTF2IRD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.32551
Mafb	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	19.0344
TFAP2A-17053090-MCF7-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
CCNT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.05601
UM-UC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844753
Adrenocortical carcinoma_ACC_TCGA-OR-A5JJ-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
interpeduncular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.61487
EID2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69086
layer VI of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.16923
Adrenocortical carcinoma_ACC_TCGA-OR-A5JM-01A-11R-A29S-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4769-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
lateral tuberal nucleus, left	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.29876
SLC4A7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7971
RWDD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.79322
GSE128730_0_v_6_neratinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
periaqueductal gray substance, ventral portion	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.00254
NCI-H82	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12632
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
CSNK2A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46184
HOPX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.89516
ZNF383	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.74839
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	-1.0	-1.98132
CIAO3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.76395
orbital frontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.39466
PRDM9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	158.126
H3K4me1_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
intracellular organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
BLOC-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.689
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0936
IX, left, paravermis	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	0.835081
RSPRY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6583
Ebf2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	94.6601
NPIPA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50428
SETD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.57249
Intercalated nucleus of amygdala	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.23638
SCC-25	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
Pparg::Rxra	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.0537
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.2577
PMC8709578-elife-69843-supp2.xlsx-MIX_Ctr-Gene_Name_MIXL1	Rummagene Transcription Factor Associations 2026	1.0	null
NEUROD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4669
HSC4	CCLE Cell Line Gene CNV Profiles	1.0	1.43883
USF1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCOA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22991
TULP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.00503
OXER1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.71094
PLBD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6722
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3661
NFIC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	74.9045
FOXP1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.453
ACAD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3749
PKNOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.8092
H3K27me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU761	CCLE Cell Line Gene CNV Profiles	-1.0	-2.84089
KLK5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.26576
PDCD2L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20053
KYSE-510	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.5226
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.276
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.4043
Esrrg	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	43.3508
Zfp335	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	21.9286
GSE168602,GSE168604_2_v_6_selumetinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
E2F8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.4084
central part of CEl	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.09383
Epidermis	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
ZBTB33_02_82	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	4.74871
ZNF16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.3649
DNAJA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.09799
VZ in postamygdaloid region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.89775
ADD3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18706
chr11_1621069_T_A_b38	GTEx eQTL 2025	1.0	1.97411
layer IIIu of area 35r	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.52341
HCFC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-4.14239
paraventricular nucleus of the hypothalamus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	1.0	1.78943
FEZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.5585
primary somatosensory cortex (area S1, areas 3,1,2)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.01871
NMCG1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.66392
cell part	GO Cellular Component Annotations 2015	1.0	null
Liver hepatocellular carcinoma_LIHC_TCGA-GJ-A6C0-01A-12R-A311-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Acute Myeloid Leukemia_LAML_TCGA-AB-2952-03B-01T-0760-13	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
IZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.44143
JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.6367
DMS114	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53565
Lung squamous cell carcinoma_LUSC_TCGA-34-5928-01A-11R-1820-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-EK-A2RO-01A-11R-A18M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
USP27X	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37444
RASSF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.8054
ERF::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.5358
PUS7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40058
primary somatosensory cortex (area S1, areas 3,1,2)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.4437
CACNA2D2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36247
inner CP in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.61587
BICR22	COSMIC Cell Line Gene CNV Profiles	1.0	2.26395
SCC4	CCLE Cell Line Gene CNV Profiles	1.0	1.75191
FOSB::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.4841
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.3871
MGA::EVX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.5067
ZNF135	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	50.9863
Ptf1a	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	374.236
RALGPS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61236
Mesothelioma_MESO_TCGA-TS-A7P6-01A-21R-A34F-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Prostate adenocarcinoma_PRAD_TCGA-G9-6385-01A-11R-1789-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
cellular_component	GO Cellular Component Annotations 2015	1.0	null
H4C6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.70545
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17743
TSPAN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.97914
Brain Lower Grade Glioma_LGG_TCGA-HT-A5R9-01A-11R-A28M-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Alx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.6394
ZNF518B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.64979
VZ in dorsomedial frontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.25319
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3042
Hair	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.317
DDX59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35442
CP in caudal hippocampus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.19723
ELF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.0541
Hemidesmosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.025
PMC9950457-mmc3.xlsx-GRHL2_binding_sites-RBBP8NL_GRHL2	Rummagene Transcription Factor Associations 2026	1.0	null
outer SZ in posteror frontal cortex (motor cortex)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.953001
SNRPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3201
NUDT11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.27309
ZBTB26	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51663
laterorostral part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.50264
ANKRD61	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.09969
CDC42EP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.30567
SMPD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69444
MRPL47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5837
ACSBG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.86662
protein complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
GALR3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.10018
SNX6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99612
NFIC::TLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.875
PARP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.60573
SNU886	CCLE Cell Line Gene CNV Profiles	-1.0	-2.34736
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894985
Brain Lower Grade Glioma_LGG_TCGA-E1-A7Z2-01A-21R-A34R-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ZNF507	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.59557
CAMA1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.93523
ZNF354C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9375
GSE175787_11_v_10_rhoc_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF701	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.1019
SRP72	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41333
ZNF416	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.7391
lateral habenular nucleus, right	Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles	-1.0	-1.21889
FOXO1::ELK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.956
ANO6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.98517
ATF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.8643
Creb3l2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.2673
KLF12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	109.603
GSE178532_2_v_0_cisplatin_human	RummaGEO Drug Perturbation Signatures	1.0	null
PAGR1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.95734
Brain Lower Grade Glioma_LGG_TCGA-FG-5964-01A-11R-1708-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
ELK1::HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8024
KLF13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.2207
posterior (caudal) superior temporal cortex (area 22c)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.66668
Brain Lower Grade Glioma_LGG_TCGA-DU-7300-01A-21R-2090-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
Nfatc2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	30.0037
HTATSF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08915
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	68.3043
posteroventral (inferior) parietal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23134
Rectum adenocarcinoma_READ_TCGA-EI-6885-01A-11R-1928-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null
hsa-miR-4784	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
amygdaloid complex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.0502
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.5174
GSE234637_2_v_0_cytarabine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4351-01A-01R-1289-07	TCGA Signatures of Differentially Expressed Genes for Tumors	1.0	null