association	dataset	threshold value	standardized value
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33964
SCRT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6942
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.4914
hippocampus (hippocampal formation)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.31612
SU-DHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3704
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.63425
H3K27me3_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.885291
lateral tuberal nuclei	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.08623
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38004
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961706
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.8012
A-VN-1203-2004(H5N1)_Day4-10^2pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.88635
GSE111061_1_v_0_tofacitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
12919955-table1	GeneSigDB Published Gene Signatures	1.0	null
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.962241
anterior (rostral) cingulate (medial prefrontal) cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.28609
BATF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3261
keratin filament	GO Cellular Component Annotations 2015	1.0	null
inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.947031
MZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5107
SKMEL2	CCLE Cell Line Gene CNV Profiles	1.0	1.44806
496100453_HIP_possible Alzheimer's disease_no TBI_88_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	18.4832
H3K4me3_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
nfe2l2_22586274_liver_lof_mouse_gpl4134_gse35124	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.951538
H3K27me3_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCI-LY7	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SNU1040	CCLE Cell Line Gene Expression Profiles	1.0	1.53172
SCRT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.7731
NUDUL1	CCLE Cell Line Gene Expression Profiles	1.0	1.71502
small intestine	HPA Tissue Protein Expression Profiles	1.0	1.04592
H3K27me3_Brain Anterior Caudate	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
chromosomal region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.113682
TCF12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.5143
MYOD1	ENCODE Transcription Factor Targets	1.0	null
NCIH1299	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51216
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-2.40342
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27599
TCF12_ECC-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24139
reticulotegmental nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.14957
EN1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.5715
macromolecular complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.2386
TFEB-21752829-HELA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
SW48	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19948
MSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2905
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.891502
USF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.0314
ARTN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01491
amniotic fluid	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.610943
NCI-H1915	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55534
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.81956
SIK3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52137
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9645
NCIH1915	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63249
UDSCC2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9251
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.173314
hsa-miR-497	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
POLR2A_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062836
amniocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.14298
OLIG2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4404
TCF12_ECC-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MZ in caudal cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.22626
cerebellar cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.905189
MYOG_myocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JHH-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27076
MAFG::NFE2L1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4318
ZNF449	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.8085
H3K27me3_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TCF12_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TFEC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3933
outer CP in primary auditory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.04704
MZ in midinferior temporal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.34765
NCIH1963	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09447
Uterine adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.713
male reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.333028
ZNF536	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.21859
COLO 792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919163
inner SZ in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.838391
cell part	GO Cellular Component Annotations 2015	1.0	null
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927826
protein complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
H3K27me3_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NUSAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80935
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053486
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.3424
amygdaloid complex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.825069
ZR7530	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54868
IZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.69469
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.7234
MYC_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tretinoin_homo sapiens_gpl6244_gds4180	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33266
TEN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37434
KMS11	CCLE Cell Line Gene Expression Profiles	1.0	1.43891
NCIH2228	CCLE Cell Line Gene Expression Profiles	-1.0	-2.05756
area postrema	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.81522
hypogonadism	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.10426
SNU16	CCLE Cell Line Gene CNV Profiles	1.0	1.95197
LN319	CCLE Cell Line Gene CNV Profiles	1.0	1.44152
intracellular organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19007
ventricular (matrix) zone of pons	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.841146
BL70	CCLE Cell Line Gene Expression Profiles	1.0	2.48433
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3014
CSB-26484114-CHIP-SEQ-FIBROBLAST-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
L540	CCLE Cell Line Gene Expression Profiles	1.0	1.69446
layer VI of area 35c	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.4819
ZNF211	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5252
endocrine system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.411657
ventrolateral prefrontal cortex_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.39035
EZH2	ENCODE Transcription Factor Targets	1.0	null
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.7796
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6771
hsa-miR-3662	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
primary auditory cortex (core)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.857818
layer I of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	3.34509
COLO-783	COSMIC Cell Line Gene Mutation Profiles	1.0	null
CAPAN-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
hypoglossal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.22197
SSBP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9576
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.335
olfactory bulb	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.75696
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24139
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050287
adipose tissue	GTEx Tissue Gene Expression Profiles	1.0	1.20168
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892092
hsa-miR-4662b	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
intermediate filament	GO Cellular Component Annotations 2015	1.0	null
HCC38	CCLE Cell Line Gene CNV Profiles	1.0	1.88898
SNU1196	CCLE Cell Line Gene CNV Profiles	1.0	1.36465
scalp	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43043
Whole body	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
MSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.0922
cSARS Bat SRBD_72Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.54276
MYOD1_myocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hippocampus (hippocampal formation)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.989221
inner portion of medial ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.83616
MAX::MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0952
HCC2218	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51131
anterior (rostral) cingulate (medial prefrontal) cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01447
y chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.42542
PMC4269325-NIHMS634665-supplement-supp_table4.xls-H3K27me3_TRIM37_KD-Unnamed_2_AR	Rummagene Transcription Factor Associations 2026	1.0	null
turner syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.727738
COLO668	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32157
KIJK	CCLE Cell Line Gene Expression Profiles	1.0	1.48931
inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.77342
MDAMB361	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83266
SNU-638	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0769
non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
GID complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.045
ventral tegmental area	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.825941
CDK12	Pathway Commons Protein-Protein Interactions	1.0	null
E2F1-17053090-MCF7-human	ChEA Transcription Factor Binding Site Profiles	1.0	null
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.066
inner CP in medial temporal-occipital cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.34582
fetal membrane	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.530693
H3K27me3_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC1143	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4577
REDD1_Repression_GDS3558_73_human_Blood Myeloid Cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
MDAMB134VI	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.34004
spinal trigeminal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.16156
inner portion of lateral ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.93971
amnion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.738854
OE33	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
Ciliary pocket	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.755
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6418
outer SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.28426
head	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052191
hsa-miR-4760-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
DNAJC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37844
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61039
UACC812	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
P63_DEPLETION_GDS2534_63_human_ME180 cervical carcinoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
UM-UC-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
primary visual cortex (striate cortex, area V1/17)_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.02024
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.223419
primary auditory cortex (core)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.86353
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41308
gracile nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.22615
JVM2	CCLE Cell Line Gene Expression Profiles	1.0	2.47534
SUPB15	CCLE Cell Line Gene Expression Profiles	-1.0	-1.75609
NCIN87	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
HOXB3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.5948
ISX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2441
TFEB-21752829-HELA-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
primary visual cortex (striate cortex, area V1/17)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.955015
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060638
lateral posterior nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.23011
H3K27me3_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932861
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19007
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19007
H3K9me3_G1E_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
primary visual cortex (striate cortex, area V1/17)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.35546
H3K27me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042888
hsa-miR-195	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.921135
PRPF4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29125
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.91996
hsa-miR-494	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.07142
SNU349	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54076
MYOD1_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lateral intermediate part of entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.50544
JHOC5	CCLE Cell Line Gene CNV Profiles	1.0	1.42309
H3K27me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8776
H3K27me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
primary auditory cortex (core)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.870483
hsa-miR-3145-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
PMC3644282-1471-2164-14-110-S3.xls-Contextual_Gene_Set_TCGA-GBM-OVOL2_OVOL2	Rummagene Transcription Factor Associations 2026	1.0	null
PBRM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62681
hippocampus (hippocampal formation)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.896727
KP2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.47302
interpeduncular nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.05261
SNU-423	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC1897	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36748
Collecting duct cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.017
hsa-miR-4770	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
prepositus hypoglossal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-2.31435
SARS-CoV MA15_Day7-PFU-10^2_None_GSE33266	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.25766
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43043
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6355
cerebellar cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.991725
TCF3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SKLU1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.55319
ventrolateral prefrontal cortex_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.936804
DRGX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.637
GBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1065
HCC1143	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.936405
AU565	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
496100304_HIP_no dementia_no TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.80978
KDM5A	ENCODE Transcription Factor Targets	1.0	null
ZBTB7C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.5881
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.042831
MYOG	ENCODE Transcription Factor Targets	1.0	null
cetuximab_homo sapiens_gpl570_gse21483	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC2218	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71784
Integument	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
male reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055453
RH30	CCLE Cell Line Gene CNV Profiles	1.0	1.33254
inferolateral temporal cortex (area TEv, area 20)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.38992
F5	CCLE Cell Line Gene Expression Profiles	-1.0	-1.77848
alitretinoin_homo sapiens_gpl6480_gse43090	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TRAPP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.868
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.841573
hsa-miR-527	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
IKZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1869
H3K27me3_Stomach Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.058241
pyramidal layer of rostral subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.931192
HCC2935	CCLE Cell Line Gene Expression Profiles	-1.0	-2.76438
MCF7	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.572185
TFEB	ChEA Transcription Factor Targets	1.0	null
NCIH526	CCLE Cell Line Gene Expression Profiles	-1.0	-2.62777
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835729
peripheral blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.098599
Keratinization	Reactome Pathways 2024	1.0	null
A-VN-1203-2004(H5N1)_Day2-10^3pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.82615
EPS15	Pathway Commons Protein-Protein Interactions	1.0	null
APLP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.04737
MAF::NFE2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.067
JK1	CCLE Cell Line Gene Expression Profiles	1.0	2.17031
intracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.060155
macromolecular complex	GO Cellular Component Annotations 2015	1.0	null
NEUROD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.9137
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55999
ATOH7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3189
peripheral blood lymphocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.451813
dorsolateral prefrontal cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.959967
gonadal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.941611
MYOG_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mpkCCD cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.359
dorsolateral prefrontal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.4366
BHLHE22	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6847
kallmann syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.53745
posterior (caudal) superior temporal cortex (area 22c)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.73484
KYSE510	CCLE Cell Line Gene Expression Profiles	1.0	1.39009
ZEB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.3065
keratin filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
ZNF35	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7983
H3K4me3_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_Brain Substantia Nigra	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
hsa-miR-3145-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
ventral posterior inferior nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.72047
TCF12	ENCODE Transcription Factor Targets	1.0	null
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8214
cuneate nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.3943
H3K27me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K4me3_G1E-ER4_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
organelle part	GO Cellular Component Annotations 2015	1.0	null
primary visual cortex (striate cortex, area V1/17)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.13016
POLR2A_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.654067
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26927
MDAMB453	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74953
KYSE520	CCLE Cell Line Gene CNV Profiles	1.0	1.40211
hsa-miR-1193	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.0155
non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.200328
lateral ganglionic eminence_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.877109
cytoskeletal part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
FOS::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3232
Liver	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.14191
rostral division of VL	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.92615
hippocampus (hippocampal formation)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11085
SP in rostral midinferior temporal cortex (area 36)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.27057
CTCF_GM10248_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dorsolateral prefrontal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.964885
REST	ENCODE Transcription Factor Targets	1.0	null
GCM2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1201
hippocampus (hippocampal formation)_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.51085
Ovary	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.68845
NCI-H2126	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HS578T	CCLE Cell Line Gene Expression Profiles	-1.0	-2.01315
male reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.918848
RCHACV	CCLE Cell Line Gene Expression Profiles	1.0	1.35916
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55863
H3K9me3_G1E_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05198
KMS34	CCLE Cell Line Gene Expression Profiles	1.0	1.36256
Intraciliary transport particle B	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.813
184A1N4	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.58891
H3K27me3_MEL cell line_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_Skeletal Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
amygdaloid complex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.832652
USF2	JASPAR Predicted Transcription Factor Targets	1.0	null
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27758
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.969107
PAX5_OE_GDS4978_548_human_L428-PAX5	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	76.477
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0769
Spinocerebellar ataxia type 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.055
GBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7328
GlobusPallidus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.903456
Corneocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.805
BCL11A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1355
MAFF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0841
icSARS CoV_60Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	0.914623
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8979
NOL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.9248
intermediate filament cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
inner CP in dorsomedial parietal cortex (area 7m)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.950621
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.1482
rectum	HPA Tissue Protein Expression Profiles	1.0	1.04592
DLX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.0214
primary auditory cortex (core)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.1308
CAMA1	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.59457
SIX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9901
SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.2669
BHLHE41	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4556
RAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6417
H3K4me3_G1E_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
MZ in rostral midinferior temporal cortex (area 36)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.89305
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.042621
EZH2_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HEC-1-A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01075
mixed gonadal dysgenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.47857
HCC2218	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.48358
Head	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
fulvestrant_homo sapiens_gpl570_gse22533	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
hsa-miR-4647	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
intermediate filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
GRHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6526
MSANTD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.349
CREB1	JASPAR Predicted Transcription Factor Targets	1.0	null
sex chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.20601
SNU738	CCLE Cell Line Gene Expression Profiles	-1.0	-1.51814
skin	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ARNT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0584
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977818
ZNF205	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.08363
genetic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.217012
AGS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
hsa-miR-16	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
hippocampus (hippocampal formation)_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.19046
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
EN1	JASPAR Predicted Transcription Factor Targets	1.0	null
NPHP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.882
HNF4, COUP	MotifMap Predicted Transcription Factor Targets	1.0	null
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00526
anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.912515
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.21954
H3K27me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intracellular non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
3-M syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.27
HOXB8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1547
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
inner CP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.906657
azoospermia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.2656
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834618
Hepatic Cirrhosis_Liver_GSE6764	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.94171
Intraciliary transport particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.687
icSARS CoV_30Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	2.04502
HFM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.70783
H3K9me3_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
LHX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.9758
VZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.12989
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1309
NCIH2066	CCLE Cell Line Gene CNV Profiles	1.0	1.46377
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
SKBR3	CCLE Cell Line Gene CNV Profiles	1.0	2.4138
MDAMB157	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
MDAMB453	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.02793
CTCF	ENCODE Transcription Factor Targets	1.0	null
HEC-1-A cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.258
amniotic cavity	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.22246
HCC70	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.892142
hsa-miR-3973	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.880544
prednisolone_homo sapiens_gpl570_gse32962	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
hsa-miR-15a	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.843347
FAM156B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02947
RMGI	CCLE Cell Line Gene CNV Profiles	1.0	2.13704
VZ in subgenual cingulate neocortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.70299
PMC11749115-loae020_suppl_Supplementary_Table_S2.xlsx-CHOP-high-gene_DDIT3	Rummagene Transcription Factor Associations 2026	1.0	null
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.956
19036130-TableS1a	GeneSigDB Published Gene Signatures	1.0	null
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1498
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	80.6458
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16422
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5891
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051727
hsa-miR-2114	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
amygdaloid complex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.882286
HUPT3	CCLE Cell Line Gene CNV Profiles	1.0	1.62183
A673	CCLE Cell Line Gene CNV Profiles	-1.0	-1.72234
SMAD3-21741376-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
dorsolateral prefrontal cortex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.08739
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.862
posteroventral (inferior) parietal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.980068
intracellular organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040956
SNAI2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.1804
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052029
PMC7608835-aba3058_Table_S4.xlsx-EWS-FLI1_RING1B-Genes_containing_RING1B_EWSR1-FLI1_enhancers_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
RAD21_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14109
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45929
DLX6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3237
dorsolateral prefrontal cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.97301
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17383
ZFHX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.53867
ZNF85	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.7877
primary auditory cortex (core)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23638
TWIST1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.4544
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70386
orbital frontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.965422
cytoskeletal part	GO Cellular Component Annotations 2015	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.24983
primary auditory cortex (core)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.50163
SP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.25693
FU97	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33064
LOX-1_OE_GDS4262_433_human_HAECT - aortic endothelial cell line - 6 Hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Scalp	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
FOSL2::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.6757
SNB75	COSMIC Cell Line Gene Mutation Profiles	1.0	null
lymphoid cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054911
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8732
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.0655
UACC812	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.813867
LBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1919
gallbladder	HPA Tissue Protein Expression Profiles	1.0	1.04592
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	38.658
medial preoptic nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.44839
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051111
RAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.9456
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.8653
pontobulbar body	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.1286
UMUC1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.70819
BICR31	CCLE Cell Line Gene CNV Profiles	1.0	1.84026
primary visual cortex (striate cortex, area V1/17)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.28897
inferior olive, dorsal nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.83177
hsa-miR-3605-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
SNU5	CCLE Cell Line Gene CNV Profiles	1.0	1.88853
H3K4me3_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K9me3_erythroblast_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
VZ in septal region	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.24642
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
mediodorsal nucleus of thalamus_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.825069
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991796
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
MDAMB436	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-0.559616
fetus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.126894
FOS::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2041
GCM1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.1126
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.89482
GFI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.0189
HCC1428	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35767
H3K27me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MLX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2558
bladder	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
choroid plexus of the fourth ventricle	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.1168
GSE139455_2_v_3_stat3_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.4266
SOX11-22085726-ESNS-MOUSE	ChEA Transcription Factor Targets 2022	1.0	null
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.6025
KM12	COSMIC Cell Line Gene Mutation Profiles	1.0	null
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.83522
FOSL1::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7035
Idiopathic fibrosing alveolitis_Lung Tissue_GSE21369	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-2.37933
LUDLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.3989
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
SP in rostral cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.911748
VZ in primary visual cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07367
H3K27me3_CD4+ CD25+ CD127- Treg Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.7505
magnocellular division of VA	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.26527
organelle part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040872
NCIH929	CCLE Cell Line Gene Expression Profiles	1.0	1.47095
primary motor-sensory cortex (samples)_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.32058
NCCSTCK140	CCLE Cell Line Gene Expression Profiles	-1.0	-1.73187
medial subdivision of central nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.57091
MS-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983938
inner SZ in posterior parahippocampal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.13799
posteroventral (inferior) parietal cortex_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.14485
JIMT1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.03791
hsa-miR-4426	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.20993
H3K27me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HEC1A	CCLE Cell Line Gene CNV Profiles	1.0	1.63208
Hair shaft	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.728
primary motor cortex (area M1, area 4)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.18088
SATB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2529
FOS::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7369
cochlear nuclei	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.02979
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.3862
H3K27me3_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ASPC1	CCLE Cell Line Gene Expression Profiles	-1.0	-3.12264
reproductive system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.877376
CHD1	ENCODE Transcription Factor Targets	1.0	null
Loin	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.743
medial ganglionic eminence_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.40167
BLOC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.857
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5019
hsa-miR-548b-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
HMBOX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.0303
CHMP1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.95993
callosal sling	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.0184
A704	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52148
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919163
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.834552
Keratin-associated protein	InterPro Predicted Protein Domain Annotations	1.0	null
MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.4699
TBX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3244
orbital frontal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.832794
POLR2A	ENCODE Transcription Factor Targets	1.0	null
HL60	CCLE Cell Line Gene Expression Profiles	1.0	1.60778
molecular layer of caudal subiculum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	2.03655
H3K27me3_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1239
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6579
AU565	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	1.61864
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
integument	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SP in subgenual (subcallosal) cingulate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.829698
inner CP in rostral perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.67801
H3K27ac_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.5735
urinary bladder	HPA Tissue Protein Expression Profiles	1.0	1.04592
hsa-miR-4290	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
hsa-miR-143	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
POLRMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.84835
posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.54285
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.8655
abducens nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.828443
MYC	ENCODE Transcription Factor Targets	1.0	null
MHHES1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78153
CTCF-20526341-ESCS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
ZNF76	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.7531
CL-11	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ME1	CCLE Cell Line Gene Expression Profiles	1.0	1.56118
Ankylosing Spondylitides_macrophage_GSE11886	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.62551
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07591
OVCA420	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
COLO680N	CCLE Cell Line Gene CNV Profiles	1.0	1.53936
SLC27A4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.2516
ZBTB18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.3546
ERF::NHLH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.6717
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14109
Heart	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.40106
nucleus of diagonal band	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.13837
fallopian tube	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32926
medial portion of STH	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.29791
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
MZ in dorsolateral prefrontal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.56708
CEBPB	JASPAR Predicted Transcription Factor Targets	1.0	null
E2F1-17053090-MCF-7-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
A1207	CCLE Cell Line Gene CNV Profiles	1.0	1.72595
RAD21	ENCODE Transcription Factor Targets	1.0	null
WSUDLCL2	CCLE Cell Line Gene Expression Profiles	1.0	3.377
E2F1	ChEA Transcription Factor Targets	1.0	null
H3K27me3_CD3 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
intracellular part	GO Cellular Component Annotations 2015	1.0	null
hsa-miR-4701-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
primary auditory cortex (core)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.6908
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-3123	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14109
OLIG3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7282
primary motor cortex (area M1, area 4)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.12164
NCIH2196	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35857
hippocampus (hippocampal formation)_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.837933
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90152
cerebellar vermis	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.96816
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.53028
PATU8902	CCLE Cell Line Gene Expression Profiles	1.0	1.67891
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19948
TCF3	ENCODE Transcription Factor Targets	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_25 pcw_F_12948	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.08073
Developmental Biology	Reactome Pathways 2024	1.0	null
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46869
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971501
ETV5::FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5038
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6947
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.9318
outer CP in dorsomedial extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.979561
OLIG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6055
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.931542
MHHNB11	CCLE Cell Line Gene Expression Profiles	1.0	1.62278
H3K27me3_Brain Inferior Temporal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MZ in primary auditory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07233
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
skin	GTEx Tissue Gene Expression Profiles	1.0	2.18987
H3K4me3_G1E-ER4_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
PLC/PRF/5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.47026
dorsolateral prefrontal cortex_12 pcw_F_12960	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.37707
intracellular non-membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.200328
LOX-1_OE_GDS4262_434_human_HAECT - aortic endothelial cell line - 12 Hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
caudal ganglionic eminence_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.07914
Uterine corpus endometrial carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
TP53_01_37	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.43424
POLR2A_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33964
Skin	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
cellular_component	GO Cellular Component Annotations 2015	1.0	null
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961706
GABPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7405
hsa-miR-3160-3p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.7397
ETV4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.22415
duodenum	HPA Tissue Protein Expression Profiles	1.0	1.04592
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2073
primary auditory cortex (core)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.883147
Brain - Cerebellar Hemisphere	GTEx Tissue Gene Expression Profiles 2023	1.0	3.12745
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
rnf2_20123906_mouse_embryonic_stem_cell_lof_mouse_gpl1261_gse19076	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.016576
caudal putamen	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.882505
Lymphoma_burkitts(Raji)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.88169
mediodorsal nucleus of thalamus_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.920345
NCIH2452	CCLE Cell Line Gene CNV Profiles	1.0	1.41453
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27544
BHLHE23	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.6547
JHOM2B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55909
stratum pyramidale of caudal CA2	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.92707
H2AFZ_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NFIC	JASPAR Predicted Transcription Factor Targets	1.0	null
primary motor cortex (area M1, area 4)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.19046
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927826
peripheral blood mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.151746
ventricular (matrix) zone of cerebellum	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.56667
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834618
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3947
hsa-miR-518a-5p	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.99187
Edinger-Westphal nucleus (accessory oculomotor nucleus)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.78483
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07105
extracellular region	LOCATE Predicted Protein Localization Annotations	1.0	null
BATF::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4143
hsa-miR-3646	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.40969
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0282
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050493
Intraciliary transport particle A	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.765
OE33	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.971969
SUDHL4	CCLE Cell Line Gene Expression Profiles	1.0	2.07211
TE10	CCLE Cell Line Gene CNV Profiles	1.0	1.77848
CD34+	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.962259
BV173	CCLE Cell Line Gene Expression Profiles	1.0	2.19529
hsa-miR-1262	TargetScan Predicted Nonconserved microRNA Targets	1.0	1.55165
anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.17806
PFEIFFER	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00854
REST_Panc1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TP53_01_68	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60198
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.5652
UNCX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.5928
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.5423
cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
retina	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.847092
dorsolateral prefrontal cortex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.895279
KHM1B	CCLE Cell Line Gene Expression Profiles	1.0	1.89463
medial ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.10284
pontine nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.04356
nucleus coeruleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.957367
hsa-miR-2392	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.965816
ELK1::HOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.2575
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.4891
EZH2_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
c-MYC_KD_GDS2526_110_human_BT-474 BREAST CANCER cell line	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
dorsal subdivision of VLC	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.909546
amygdaloid complex_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.19857
H3K27me3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hsa-miR-15b	TargetScan Predicted Nonconserved microRNA Targets	1.0	0.809003
hippocampus (hippocampal formation)_18 yrs_M_12984	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04311
GATA3-26560356-CHIP-SEQ-TH1-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
KYAE-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.64759
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835729
ventral medial nucleus of thalamus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.55857
Uterine corpus cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.085
BLOC-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.957
MDS - Myelodysplastic syndrome_Bone marrow stem cell_GSE4619	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.45686
outer CP in caudal perirhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.21746
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14872
HOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8152
chromosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.394323
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051776
TFE3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.0091
CP in caudal hippocampus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.91511
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48987
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.5486
intracellular organelle part	GO Cellular Component Annotations 2015	1.0	null
RPRM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.28376
SKES1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.94106
klinefelter's syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.612792
central nuclear group	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.42889
FOSL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0436
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892092
caudal portion of VFC (area 44)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.937594
BNC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.592
PrefrontalCortex	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.05622
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.845186
gonad	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214388
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.052008
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.872353
ELF3-26769127-CHIP-SEQ-PDAC-CELL-LINE-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
RORC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.2272
POU2F2	JASPAR Predicted Transcription Factor Targets	1.0	null
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.835729
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
salivary gland	GTEx Tissue Gene Expression Profiles	-1.0	-1.17497
ZNF74	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31935
inner SZ in ventromedial extrastriate cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.86621
NCIH209	CCLE Cell Line Gene Expression Profiles	-1.0	-1.63311
SPRYD4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43304
SNU626	CCLE Cell Line Gene CNV Profiles	1.0	1.33988
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.892092
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0391
mediodorsal nucleus of thalamus_16 pcw_M_12879	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.845045
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
outer portion of medial ganglionic eminence	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.00077
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
outer SZ in caudal midinferior temporal cortex (area TF)	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.21642
male infertility	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.07656
MCF10F	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	-1.0	-1.25374
ERF::SREBF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0641
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
SARS-CoV MA15_Day7-PFU-10^4_None_GSE33266	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.67265
LBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.608
RAF1_overexpression_220_GSE42964	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	2.16225
AU565	CCLE Cell Line Gene CNV Profiles	1.0	2.49643
PANC0213	CCLE Cell Line Gene Expression Profiles	-1.0	-2.09495
ZBTB6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.7777
MYOD1_C2C12_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
mononuclear cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.076005
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.92636
PMC12616242-can-24-3452_supplementary_table_s2_suppst2.xlsx-Up_bins-Up_bins_gaining_H3K27me3_in_hpMSC-EWSR1_FLI1_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
NCI-H630	COSMIC Cell Line Gene Mutation Profiles	1.0	null
H3K27me3_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RS411	CCLE Cell Line Gene Expression Profiles	1.0	1.73545
PMC8481886-Table_2.xlsx-A_subsets-AF_MSC_UdRPC_MSC	Rummagene Transcription Factor Associations 2026	1.0	null
inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.31612
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.35721
Blood microparticle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.727
ZIC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	62.7847
amygdaloid complex_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.37707
BATF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.513
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927826
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23381
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
ventrolateral prefrontal cortex_13 pcw_M_12888	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.55411
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4813
posterior (caudal) superior temporal cortex (area 22c)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.00334
layer III of caudal entorhinal cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.17934
TC71	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46313
RXRA::VDR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.1
H3K27me3_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
USF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.197
EMX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6297
EFO27	CCLE Cell Line Gene Expression Profiles	-1.0	-1.7256
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.854449
HNF1A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.6367
NCIH510	CCLE Cell Line Gene CNV Profiles	1.0	1.53232
orbital frontal cortex_13 yrs_F_12831	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.841041
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.50016
TLX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5462
Ventral pallidus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.09358
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.43319
SARS-CoV MA15_Day7-PFU-10^3_None_GSE33266	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.78134
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.086
H3K27me3_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
3M complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.604
SLU7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10788
SK-MEL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49201
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00619
AN3CA	CCLE Cell Line Gene Expression Profiles	1.0	1.73673
JUN	JASPAR Predicted Transcription Factor Targets	1.0	null
OCILY3	CCLE Cell Line Gene Expression Profiles	1.0	1.36097
chromosomal disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.615529
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19948
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.060521
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9922
HOXD8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.154
MLXIPL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.7867
TCF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.9273
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71778
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	61.0326
H3K27me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.209
POLR2AphosphoS5_MEL cell line_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.043885
BHLHE40	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6689
ERF::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6719
L428	CCLE Cell Line Gene CNV Profiles	1.0	1.66182
upper (rostral) rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.862399
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.994717
H3K27me3_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dentate (lateral) nucleus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-1.20708
MDAMB231	Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles	1.0	0.607121
organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
H3K27me3_CD4 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BECKER	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12875
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
amygdaloid complex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.990119
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.053424
MIXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.5555
Ciliary base	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.811
BL41	CCLE Cell Line Gene Expression Profiles	1.0	1.54839
OVKATE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59209
NCIH1944	CCLE Cell Line Gene Expression Profiles	1.0	1.52641
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60368
TCF3_myocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KBTBD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23411
TE8	CCLE Cell Line Gene Expression Profiles	-1.0	-2.04435
PL45	CCLE Cell Line Gene CNV Profiles	1.0	2.03493
NCIH2066	CCLE Cell Line Gene Expression Profiles	-1.0	-1.47349
MEIS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3428
HCC1419	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39404
Ciliary pocket collar	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.924
inner CP in primary somatosensory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	0.880272
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0132
SNRPG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3201
chromosomal part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.047435
FOS	JASPAR Predicted Transcription Factor Targets	1.0	null
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.44854
Brain - Hippocampus	GTEx Tissue Gene Expression Profiles 2023	1.0	6.43888
CDC20	Pathway Commons Protein-Protein Interactions	1.0	null
TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.785
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051979
CTCF-27219007-CHIP-SEQ-BCELLS-HUMAN	ChEA Transcription Factor Targets 2022	1.0	null
MITF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.8437
ventrolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.14108
POLR2AphosphoS5_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
protein complex	GO Cellular Component Annotations 2015	1.0	null
chromosome, centromeric region	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.535361
icSARA deltaORF6_60Hour_23365422_GSE33267	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.50162
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.288514
TC-71	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33964
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.0844
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	89.2272
ALX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.6308
anterior (rostral) cingulate (medial prefrontal) cortex_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.83343
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores 2025	1.0	4.0
posteroventral (inferior) parietal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.42001
PIK3CA_mutant_27_GDS4053	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.95708
PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Del_AA-TCGA-Unnamed_41_TEAD1	Rummagene Transcription Factor Associations 2026	1.0	null
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14109
IZ in primary auditory cortex	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.11013
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3561
H3K9me3_G1E_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932861
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4782
PRRX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.3544
OE33	COSMIC Cell Line Gene Mutation Profiles	1.0	null
granular layer of rostral dentate gyrus	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	1.0	1.07444
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.834618
external granular (germinal) layer of upper rhombic lip	Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles	-1.0	-0.932756
Arsenic	CTD Gene-Chemical Interactions	1.0	null
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69557