association dataset threshold value standardized value lateral hypothalamic area, mammillary region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.31781 Ciliary pocket COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.692 GBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.0854 FOS JASPAR Predicted Transcription Factor Targets 1.0 null SG in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.942877 RARA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 50.1763 EFM-192A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.12597 inferolateral temporal cortex (area TEv, area 20)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.00188 cerebellar cortex_4 yrs_M_12298 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.921748 PMC8046804-41467_2021_22478_MOESM11_ESM.xlsx-Del_AA-TCGA-Unnamed_41_TEAD1 Rummagene Transcription Factor Associations 2026 1.0 null deep layers of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.0201 NCI-H596 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.99959 BACH2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 58.5498 cell part GO Cellular Component Annotations 2015 1.0 null Skin TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 3M complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.541 ONECUT1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.3099 NCI-H2452 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.63425 Kidney renal clear cell carcinoma_KIRC_TCGA-BP-4992-01A-01R-1334-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Prostate adenocarcinoma_PRAD_TCGA-CH-5788-01A-11R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CAPAN1 CCLE Cell Line Gene CNV Profiles 1.0 1.74424 RI1 CCLE Cell Line Gene Expression Profiles -1.0 -1.80154 lateral nucleus of pulvinar Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.29818 lateral hypothalamic area, anterior region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.53149 3-M syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.242 posterior (caudal) superior temporal cortex (area 22c)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.14913 GOTO COSMIC Cell Line Gene Mutation Profiles 1.0 null CTCF_GM12866_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null posteroventral (inferior) parietal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.08693 PHOX2B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 43.661 VZ in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.03646 E2F1-17053090-MCF-7-HUMAN ChEA Transcription Factor Targets 2022 1.0 null ATF4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.8145 striatum_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.23995 temporal pole, left, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.934238 subcuneiform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.08205 HCC1428 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.32951 TFAP4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 63.1244 MDA-MB-436 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.2795 inferolateral temporal cortex (area TEv, area 20)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.20513 NUGC-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.45929 PAX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.772 central nuclear group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.5543 NCIN87 CCLE Cell Line Gene CNV Profiles 1.0 2.02729 lateral parabrachial nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.928199 hippocampus (hippocampal formation)_13 pcw_F_12834 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.865492 Scalp TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 ventricular (matrix) zone of pons Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.851956 CAL33 CCLE Cell Line Gene Expression Profiles -1.0 -1.69436 BICR31 CCLE Cell Line Gene CNV Profiles 1.0 1.46881 CPC-N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.23381 TP53BP1_KD_GSE54268_670_human_MCF-10A GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null inner SZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.59347 medial vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.15036 ALX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.581 COLO 792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.919163 SKES1 CCLE Cell Line Gene CNV Profiles -1.0 -2.37078 Prostate adenocarcinoma_PRAD_TCGA-G9-6338-01A-12R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SP in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.841228 dorsal motor nucleus of the vagus (vagal nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.944587 DOR 13 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.56726 TEN CCLE Cell Line Gene CNV Profiles -1.0 -1.46136 HCC515 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.921245 dorsal thalamus_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.862646 IZ in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.831184 TCF12 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 41.2194 VMRCRCW CCLE Cell Line Gene Expression Profiles 1.0 2.72701 primary somatosensory cortex (area S1, areas 3,1,2)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.54276 hsa-miR-570 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 BNC2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.592 SHOX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.0819 FOXO1::ELK3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.3443 hsa-miR-591 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 intracellular part GO Cellular Component Annotations 2015 1.0 null Loin TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.786 KDM5A ENCODE Transcription Factor Targets 1.0 null NCI-H1299 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.921245 MZ in rostral midinferior temporal cortex (area 36) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.940627 OVCAR433 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.961148 Lung squamous cell carcinoma_LUSC_TCGA-68-7755-01A-11R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null intermediate filament GO Cellular Component Annotations 2015 1.0 null Prostate adenocarcinoma_PRAD_TCGA-G9-6370-01A-11R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZSCAN4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 45.4269 PIWIL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84481 Brain Lower Grade Glioma_LGG_TCGA-HW-8319-01A-11R-2404-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-548b-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 FOSL1::JUN JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.8542 molecular_function GO Molecular Function Annotations 2015 1.0 null JL1 CCLE Cell Line Gene Expression Profiles 1.0 1.7187 Uterine Carcinosarcoma_UCS_TCGA-N9-A4Q4-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4329 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 reticulotegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.95758 KNS-42 COSMIC Cell Line Gene Mutation Profiles 1.0 null SNU878 CCLE Cell Line Gene Expression Profiles 1.0 1.59702 FSTL3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08894 primary visual cortex (striate cortex, area V1/17)_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.08032 subparafascicular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.14907 EM2 CCLE Cell Line Gene CNV Profiles 1.0 1.58169 LN235 CCLE Cell Line Gene Expression Profiles -1.0 -1.78929 primary motor-sensory cortex (samples)_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.921078 JHH-7 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.835729 ERA-21632823-H3396-HUMAN ChEA Transcription Factor Targets 2022 1.0 null HCC1897 CCLE Cell Line Gene CNV Profiles -1.0 -1.45138 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6907-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.076 JK1 CCLE Cell Line Gene Expression Profiles 1.0 1.68297 angular gyrus, right, superior bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.853702 ALEXANDERCELLS CCLE Cell Line Gene Expression Profiles 1.0 1.7746 Brain Lower Grade Glioma_LGG_TCGA-S9-A7R1-01A-12R-A34R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Rectum adenocarcinoma_READ_TCGA-EI-6917-01A-11R-1928-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4701-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 hsa-miR-545 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 496100418_TCx_no dementia_TBI_85_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.80765 hsa-miR-15a TargetScan Predicted Nonconserved microRNA Targets 1.0 0.921135 NCI-H1915 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.74986 IZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.02059 NCI-H2795 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.55999 NR3C2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.2182 NCIH2196 CCLE Cell Line Gene CNV Profiles -1.0 -1.4385 COV362 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.32951 OVCAR-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.879537 NIH:OVCAR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.28901 Prostate adenocarcinoma_PRAD_TCGA-HC-8265-01A-11R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.860544 COLO-783 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.857717 TC71 CCLE Cell Line Gene CNV Profiles -1.0 -1.58055 BLOC complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.794 ZNF730 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0564 dentate gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.04782 MDAPCA2B CCLE Cell Line Gene Expression Profiles -1.0 -1.47568 Hepatic Cirrhosis_Liver_GSE6764 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.58948 UM-UC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.19007 anterior orbital gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.24042 Skin Cutaneous Melanoma_SKCM_TCGA-EE-A29G-06A-12R-A18T-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZIC5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 64.0686 H3K27me3_SK-N-SH_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.909976 OVISE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00526 vagina GTEx Tissue Gene Expression Profiles -1.0 -2.10021 NCIH1299 CCLE Cell Line Gene CNV Profiles -1.0 -1.64004 H3K4me1_fibroblast of dermis_hg19_1 ENCODE Histone Modification Site Profiles 1.0 null SZ in rostral cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.53392 GSE139455_4_v_6_stat3_human RummaGEO Gene Perturbation Signatures -1.0 null anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.37826 BATF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.314 LN215 CCLE Cell Line Gene Expression Profiles -1.0 -1.95138 THOC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.11415 duodenum HPA Tissue Protein Expression Profiles 1.0 1.04592 hippocampus (hippocampal formation)_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18839 amygdaloid complex_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.80829 Type 1 diabetes mellitus_T lymphocyte_GSE10586 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 1.38353 EZH2_myotube_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mediodorsal nucleus of thalamus_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.18498 lateral intermediate part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.78782 dorsolateral prefrontal cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.03448 temporal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -2.12629 NCI-N87 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.21954 NEUROD1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.2528 LN464 CCLE Cell Line Gene Expression Profiles -1.0 -1.58814 PDX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.6001 inner CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.64753 ASCL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 90.0597 inferior frontal gyrus, opercular part, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.97511 NCI-H1105 COSMIC Cell Line Gene Mutation Profiles 1.0 null MDAMB361 CCLE Cell Line Gene CNV Profiles -1.0 -2.1595 PANC 05.04 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.991796 cerebellar cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.853652 LBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.5933 mediodorsal nucleus of thalamus_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.03678 HT-115 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.969107 EHF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.2314 ZNF582 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.7952 intracellular organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 hsa-miR-527 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 Rectum adenocarcinoma_READ_TCGA-AH-6549-01A-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HCC1171 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.885291 hsa-miR-497 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 Lung squamous cell carcinoma_LUSC_TCGA-56-7582-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SP in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.895147 ZR-75-30 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.56726 hippocampus (hippocampal formation)_16 pcw_M_12879 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.887199 Brain Lower Grade Glioma_LGG_TCGA-FG-A4MX-01A-11R-A26U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.64409 cytoskeleton COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 central medullary reticular group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.95595 posterior orbital gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.15307 organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 hsa-miR-876-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.2992 intermediate filament COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 cellular_component COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 inferior temporal gyrus, right, bank of the its Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.865159 NFATC4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 37.362 motor nucleus of trigeminal nerve Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.2234 TC-YIK COSMIC Cell Line Gene Mutation Profiles 1.0 null HNF1A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.4332 SRY JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.75 YAPC CCLE Cell Line Gene Expression Profiles -1.0 -2.44566 HUP-T3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.26927 ERF::FIGLA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 48.0049 FOXO6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.2572 dorsal subdivision of VLC Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.43812 KINGS-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null JEKO-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.37084 POU4F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.4668 NCIH1184 CCLE Cell Line Gene CNV Profiles 1.0 1.53561 FOXP1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.3694 hsa-miR-3605-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 H3K27me3_CD14-positive monocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cytoskeletal part GO Cellular Component Annotations 2015 1.0 null OE33 CCLE Cell Line Gene CNV Profiles 1.0 3.2803 primary motor cortex (area M1, area 4)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.58051 hsa-miR-16 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 TRAPP complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.805 Lung squamous cell carcinoma_LUSC_TCGA-56-7730-01A-11R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FLI1::DRGX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.7406 Brain Lower Grade Glioma_LGG_TCGA-HT-7603-01A-21R-2090-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SIX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.0162 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-DS-A0VN-01A-21R-A10U-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100664_HIP_probable Alzheimer's disease_no TBI_82_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 9.3652 EVSA-T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.899303 RMG-I COSMIC Cell Line Gene Mutation Profiles 1.0 null COLO678 CCLE Cell Line Gene CNV Profiles 1.0 1.78736 TBK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13388 HCC1833 CCLE Cell Line Gene Expression Profiles -1.0 -2.25357 VZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06801 small intestine HPA Tissue Protein Expression Profiles 1.0 1.04592 Brain Lower Grade Glioma_LGG_TCGA-FG-6692-01A-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null IZ in dorsolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.16501 NCI-H920 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.977818 CEBPZ_01_75 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.61119 ZNF211 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.3463 BCL11A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.1355 Head TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 primary auditory cortex (core)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.93794 Collecting duct cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.06 BT-549 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20827 Head and Neck squamous cell carcinoma_HNSC_TCGA-HD-8635-11A-01R-2403-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU175 CCLE Cell Line Gene Expression Profiles 1.0 1.9188 dorsolateral prefrontal cortex_19 pcw_F_12885 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.24759 organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 SCC9 CCLE Cell Line Gene Expression Profiles 1.0 1.74469 superior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.82825 CHAGOK1 CCLE Cell Line Gene Expression Profiles 1.0 1.9008 HCC1419 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.44944 ATOH7 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.0756 RMG-I Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.971501 Sarcoma_SARC_TCGA-QQ-A5VD-01A-21R-A32Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCIH2452 CCLE Cell Line Gene CNV Profiles 1.0 1.35448 ctnnb1_19652203_myeloma_lof_human_gpl570_gds3578 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations -1.0 -0.301672 NEUROG2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.1564 PRRX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.3087 MAX::MYC JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.1905 intracellular non-membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 GSC JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.3182 VI, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.92976 COR-L88 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.24792 GSE128844_0_v_3_chloroquine_human RummaGEO Drug Perturbation Signatures 1.0 null Brain Lower Grade Glioma_LGG_TCGA-FG-5965-02B-11R-A29R-07,TCGA-FG-5965-02A-11R-A29R-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null BATF3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.4977 dorsolateral prefrontal cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.4656 JIMT1 CCLE Cell Line Gene CNV Profiles -1.0 -2.66564 Lung squamous cell carcinoma_LUSC_TCGA-21-1080-01A-01R-0692-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null fastigial nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.14649 FOXC2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.7036 OVCA420 COSMIC Cell Line Gene CNV Profiles 1.0 2.64759 rectum HPA Tissue Protein Expression Profiles 1.0 1.04592 EOL-1-CELL COSMIC Cell Line Gene Mutation Profiles 1.0 null outer CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.09204 hippocampus (hippocampal formation)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.918029 MG63 CCLE Cell Line Gene Expression Profiles -1.0 -1.68177 ZNF382 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.9294 central nucleus of inferior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.36496 posterior (caudal) superior temporal cortex (area 22c)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.45072 TE-15 COSMIC Cell Line Gene Mutation Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.04489 TCF12_ECC-1_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null macromolecular complex GO Cellular Component Annotations 2015 1.0 null hsa-miR-4760-3p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 Prostate adenocarcinoma_PRAD_TCGA-G9-6365-11A-01R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null prostate GTEx Tissue Gene Expression Profiles -1.0 -1.17493 ELF3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.0918 HEP G2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.89482 H3K27me3_H7_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PL45 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.48987 EZH2_mammary epithelial cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null NCIH1915 CCLE Cell Line Gene CNV Profiles -1.0 -1.80098 MHH-ES-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.04333 RERF-LC-KJ COSMIC Cell Line Gene Mutation Profiles 1.0 null primary auditory cortex (core)_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.887622 SNU-1040 COSMIC Cell Line Gene Mutation Profiles 1.0 null TCF12_GM12878_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung adenocarcinoma_LUAD_TCGA-55-7724-01A-11R-2170-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXN3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.4589 TBXT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.88041 IV, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.909205 DLX6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.2819 keratin filament COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 CD33+_Myeloid BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.07594 PMC7291745-12967_2020_2407_MOESM2_ESM.xlsx-Table_S1D_CCF_pairs-locus_PITX1 Rummagene Transcription Factor Associations 2026 1.0 null DETROIT 562 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.961148 hippocampus (hippocampal formation)_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.878568 PLC/PRF/5 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.06125 BICR 31 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.845186 COLO 680N Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.38004 pedunculo(pontine) tegmental nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.46942 inferolateral temporal cortex (area TEv, area 20)_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.36459 OVCA 420 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.27758 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8EL-01A-11R-A37O-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OE33 COSMIC Cell Line Gene CNV Profiles 1.0 2.64759 HUO-3N1 COSMIC Cell Line Gene Mutation Profiles 1.0 null cell part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 Prostate adenocarcinoma_PRAD_TCGA-HC-7745-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inner SZ in ventromedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.855387 medial subdivision of central nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.58969 anterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.13967 OVKATE CCLE Cell Line Gene CNV Profiles -1.0 -1.74778 TFAP2A-17053090-MCF7-human ChEA Transcription Factor Binding Site Profiles 1.0 null ETV5::DRGX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.9325 primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.838088 BATF::JUN JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.4029 primary motor cortex (area M1, area 4)_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.62297 cell COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 COLO668 CCLE Cell Line Gene CNV Profiles -1.0 -1.38742 inferior frontal gyrus, orbital part, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.16133 medioventral part of putamen Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.69673 MYBL2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.1725 FOXG1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.5815 PL18 COSMIC Cell Line Gene Mutation Profiles 1.0 null HCC70 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.02484 MFM-223 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.2795 urinary bladder HPA Tissue Protein Expression Profiles 1.0 1.04592 FOXA2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.5659 NPHP complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.82 MYF5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.624 Prostate adenocarcinoma_PRAD_TCGA-YL-A8SO-01B-31R-A37L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CORL51 CCLE Cell Line Gene Expression Profiles -1.0 -2.3258 Keratin-associated protein InterPro Predicted Protein Domain Annotations 1.0 null hsa-miR-3123 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 medial orbital gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.841302 lateral habenular nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -3.2884 Prostate adenocarcinoma_PRAD_TCGA-HC-7078-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Uterine corpus cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.056 cellular_component GO Cellular Component Annotations 2015 1.0 null KYSE-520 COSMIC Cell Line Gene Mutation Profiles 1.0 null NO-11 COSMIC Cell Line Gene Mutation Profiles 1.0 null HEC-1-A Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.01075 parabigeminal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.42078 SPIB JASPAR Predicted Transcription Factor Targets 1.0 null P12ICHIKAWA CCLE Cell Line Gene Expression Profiles 1.0 1.45801 KG1 CCLE Cell Line Gene Expression Profiles -1.0 -1.52577 SG in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.1667 COV504 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20827 CAPAN-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.64759 SOX8 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.4851 hippocampus (hippocampal formation)_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.929867 FIGLA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.7626 dorsomedial hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.33271 Lung squamous cell carcinoma_LUSC_TCGA-51-4079-01A-01R-1100-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4786-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 COLO-320-HSR COSMIC Cell Line Gene Mutation Profiles 1.0 null Brain Lower Grade Glioma_LGG_TCGA-TM-A84I-01A-11R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4689 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 Prostate adenocarcinoma_PRAD_TCGA-HC-7738-11A-01R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 2.09743 polymorphic layer of rostral subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.5738 A549 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.19007 frontal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.18819 DUXA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.2696 GATA1::TAL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.7294 NR2C1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.7684 E2F1 ChEA Transcription Factor Targets 1.0 null HNF4, COUP MotifMap Predicted Transcription Factor Targets 1.0 null Prostate adenocarcinoma_PRAD_TCGA-EJ-7789-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4468 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 layer VI of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.47083 hsa-miR-3679-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 superior frontal gyrus, right, medial bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.08586 TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-18-5595-01A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null HUPT3 CCLE Cell Line Gene CNV Profiles 1.0 1.37709 Bladder Urothelial Carcinoma_BLCA_TCGA-BL-A5ZZ-01A-31R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SARC9371 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K27me3_mononuclear cell_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SW1271 COSMIC Cell Line Gene Mutation Profiles 1.0 null TK Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.835729 EZH2_T-cell acute lymphoblastic leukemia_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null inner CP in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00074 HPAC CCLE Cell Line Gene Expression Profiles 1.0 1.52661 MAFF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.8643 RAX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.5993 MIXL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.5106 HNF1B JASPAR Predicted Human Transcription Factor Targets 2025 1.0 40.8744 DAN-G Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.961148 Heart BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.22387 KCTD20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.83199 CD34+ BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.880083 SK-BR-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 3.19301 JUN JASPAR Predicted Transcription Factor Targets 1.0 null A-673 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.75505 TAL1::TCF3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.3636 primary auditory cortex (core)_25 pcw_F_12948 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.22081 OVCA 432 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.858379 Intraciliary transport particle A COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.702 gallbladder HPA Tissue Protein Expression Profiles 1.0 1.04592 Brain Lower Grade Glioma_LGG_TCGA-FG-5965-01B-11R-1896-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXS1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.8503 MOLT16 CCLE Cell Line Gene Expression Profiles 1.0 1.36493 SNAI3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.0198 CardiacMyocytes BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.66849 VZ in thalamic region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.909976 hsa-miR-1185 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 PFEIFFER Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.00854 MXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.9447 ventrolateral prefrontal cortex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.825004 ISX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.2393 amygdaloid complex_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.926454 posterior hypothalamic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.931364 MYCN JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.8365 posteroventral (inferior) parietal cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.74339 cortico-medial group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.38581 MZ in granular insular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.65911 CALU-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.19007 ZNF24 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 50.014 SOX10 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.6268 TCF3 ENCODE Transcription Factor Targets 1.0 null paracentral lobule, posterior part, right, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.4308 Rectum adenocarcinoma_READ_TCGA-AH-6643-01A-11R-1830-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null striatum_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.929867 GSE139455_0_v_6_stat3_human RummaGEO Gene Perturbation Signatures -1.0 null SREBF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 66.0187 NCI-H1573 COSMIC Cell Line Gene Mutation Profiles 1.0 null Integument TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.910235 ZEB1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.2272 IZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.63692 ventrolateral prefrontal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.14641 ETV2::DRGX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.883 Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-G8-6914-01A-11R-2213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NKX6-1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.8271 primary motor cortex (area M1, area 4)_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.01147 EZH2 ENCODE Transcription Factor Targets 1.0 null TCF12_ECC-1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MSC JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.2236 X, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18428 inferolateral temporal cortex (area TEv, area 20)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.955581 MDA-MB-453 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.84113 intracellular organelle part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 Lung squamous cell carcinoma_LUSC_TCGA-66-2767-01A-01R-0851-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Liver hepatocellular carcinoma_LIHC_TCGA-BC-A110-01A-11R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-56-7221-01A-11R-2045-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cerebellar cortex_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.29355 HCC1419 CCLE Cell Line Gene CNV Profiles -1.0 -1.48972 JHOM2B CCLE Cell Line Gene CNV Profiles -1.0 -1.70094 KP-2 COSMIC Cell Line Gene Mutation Profiles 1.0 null adipose tissue GTEx Tissue Gene Expression Profiles 1.0 1.2035 EN1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.5384 KLM1 CCLE Cell Line Gene Expression Profiles -1.0 -2.18679 CiliaryGanglion BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.54032 H3K27me3_cardiac mesoderm_hg19_8 ENCODE Transcription Factor Binding Site Profiles 1.0 null SP in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.73954 Intraciliary transport particle B COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.75 Lung squamous cell carcinoma_LUSC_TCGA-22-4604-01A-01R-1201-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null GlobusPallidus BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 0.89517 hsa-miR-4290 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.7397 AU565 COSMIC Cell Line Gene CNV Profiles 1.0 2.64759 hsa-miR-4517 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 CAL-62 COSMIC Cell Line Gene Mutation Profiles 1.0 null cytoskeletal part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 ZNF85 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.3664 ST486 CCLE Cell Line Gene Expression Profiles 1.0 2.38667 protein complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 TCF12_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-21-5782-01A-01R-1635-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null posterior (caudal) superior temporal cortex (area 22c)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.15696 inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.910572 TFAP2A ChEA Transcription Factor Targets 1.0 null integument TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null H-EMC-SS COSMIC Cell Line Gene Mutation Profiles 1.0 null 496100614_PCx_no dementia_TBI_84_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 5.5943 POU2F2 JASPAR Predicted Transcription Factor Targets 1.0 null icSARS CoV_24Hour_None_GSE37827 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.45137 posteroventral (inferior) parietal cortex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.98018 hsa-miR-1193 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.20993 HS255T CCLE Cell Line Gene Expression Profiles 1.0 2.13265 hsa-miR-2392 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 HAL-01 COSMIC Cell Line Gene Mutation Profiles 1.0 null PGR JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.5664 PrefrontalCortex BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.0691 hsa-miR-494 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.07142 SEPTIN7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.22873 HCC1263 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20827 OVKATE Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.71147 lateral tuberal nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.969208 Brain Lower Grade Glioma_LGG_TCGA-DB-5277-01A-01R-1470-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-B0-4813-01A-01R-1277-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ETV5::FOXO1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.8726 cerebellar cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.51894 KS-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null Prostate adenocarcinoma_PRAD_TCGA-HC-8260-11A-01R-2263-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null non-membrane-bounded organelle COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 Anterior chamber of the eye TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.018 FOSB::JUNB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.5304 HN Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.932861 frontal pole, left, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.57218 LN319 CCLE Cell Line Gene CNV Profiles 1.0 1.42401 GRHL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.6358 HCC2218 CCLE Cell Line Gene CNV Profiles -1.0 -1.92208 Adrenocortical carcinoma_ACC_TCGA-OR-A5KY-01A-11R-A29S-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Uterine adenocarcinoma cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.756 EMX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.5088 Brain Lower Grade Glioma_LGG_TCGA-FG-A711-01A-21R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-VS-A8EC-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null KP-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.857717 outer portion of medial ganglionic eminence Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.0514 organelle part GO Cellular Component Annotations 2015 1.0 null hsa-miR-195 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 ZFP57 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.262 central nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.72232 Brain Lower Grade Glioma_LGG_TCGA-CS-5394-01A-01R-1470-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNUC1 CCLE Cell Line Gene Expression Profiles 1.0 2.96841 A673 CCLE Cell Line Gene CNV Profiles -1.0 -1.93079 KYAE-1 COSMIC Cell Line Gene CNV Profiles 1.0 2.64759 c-MYC_KD_GDS2526_113_human_MDA-MB-231 BREAST CANCER cell line GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null SLR25 CCLE Cell Line Gene Expression Profiles -1.0 -2.76852 M059K Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.865369 hsa-miR-520h TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 anterior (rostral) cingulate (medial prefrontal) cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.01619 HCC1011 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.0002 medial ganglionic eminence_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.09844 HEC-1-A cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.301 KELLY Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.33266 SU-DHL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.3704 striatum_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.841203 external granular (germinal) layer of lower rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01621 MZ2-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null kidney GTEx Tissue Gene Expression Profiles 1.0 0.910719 precommissural nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.04714 anterior (rostral) cingulate (medial prefrontal) cortex_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.11264 SU-DHL-16 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.0769 layer IIIa of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.877395 EFM-192C Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.920586 FOS::JUNB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.6972 Uterine Carcinosarcoma_UCS_TCGA-NA-A4QW-01A-11R-A28V-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lymphoid Neoplasm Diffuse Large B-cell Lymphoma_DLBC_TCGA-GS-A9TV-01A-11R-A38C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null TFCP2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.9222 protein binding GO Molecular Function Annotations 2015 1.0 null inner SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.37303 POLR2A_A549_hg19_5 ENCODE Transcription Factor Binding Site Profiles 1.0 null PA-TU-8988T Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.932861 primary motor-sensory cortex (samples)_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.984402 keratin filament GO Cellular Component Annotations 2015 1.0 null MSX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.261 interstitial nucleus of Cajal, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.16961 SKBR3 CCLE Cell Line Gene CNV Profiles 1.0 2.40117 substantia nigra, pars reticulata, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.4129 dorsolateral prefrontal cortex_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.87448 SOX4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.6114 orbital frontal cortex_36 yrs_M_12302 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.0847 H3K27me3_keratinocyte_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GID complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.983 DRGX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.6389 FOXP1_01_209 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 3.21019 mediodorsal nucleus of thalamus_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.92768 inferior rostral gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.824803 Brain Lower Grade Glioma_LGG_TCGA-DU-7304-02A-12R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-4469 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.809003 HCC2218 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.68288 layer II of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.62818 KDM5A_H1-hESC_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null cerebellum_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.10182 Keratinization Reactome Pathways 2024 1.0 null FOSL1::JUND JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.7425 intracellular COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 posterior (caudal) superior temporal cortex (area 22c)_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -2.30582 intracellular part COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 Lung squamous cell carcinoma_LUSC_TCGA-79-5596-01A-31R-1949-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null cerebellar cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.05381 SK-MEL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.49201 Lung squamous cell carcinoma_LUSC_TCGA-98-A53B-01A-11R-A262-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FU97 CCLE Cell Line Gene CNV Profiles -1.0 -1.39956 EFM-192B Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.05024 POU4F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 44.9972 KON COSMIC Cell Line Gene Mutation Profiles 1.0 null tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 SW780 COSMIC Cell Line Gene Mutation Profiles 1.0 null MCC26 COSMIC Cell Line Gene Mutation Profiles 1.0 null PMC5967331-41467_2018_4384_MOESM4_ESM.xlsx-Sup_data1_with_CCF_txt-Gene_PITX1 Rummagene Transcription Factor Associations 2026 1.0 null subgenual (subcallosal) division of MFC (area 25) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.47699 Prostate adenocarcinoma_PRAD_TCGA-G9-6373-01A-11R-1789-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-77-8146-01A-11R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Ovary BioGPS Human Cell Type and Tissue Gene Expression Profiles 1.0 1.42123 ZNF43_01_125 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 0.89187 dorsolateral prefrontal cortex_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.933905 KLF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.9518 zona incerta, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.97415 extracellular region LOCATE Predicted Protein Localization Annotations 1.0 null Ciliary base COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.749 HCC1599 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.60368 caudal portion of VFC (area 44) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.83467 496100326_TCx_no dementia_TBI_81_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 14.1908 trochlear nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.972905 CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.3477 Brain Lower Grade Glioma_LGG_TCGA-TQ-A7RF-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null V, right, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.9149 Liver BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.07819 primary motor cortex (area M1, area 4)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.51608 REST ENCODE Transcription Factor Targets 1.0 null JHH-4 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.27076 Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-6938-11A-01R-1915-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NR6A1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.0466 superior temporal gyrus, right, lateral bank of gyrus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.92604 Lymphoma_burkitts(Daudi) BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -0.824684 DDX27 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76455 hsa-miR-1262 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.55165 NCI-H1693 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.2795 KMH2 CCLE Cell Line Gene Expression Profiles 1.0 1.72942 Kidney renal papillary cell carcinoma_KIRP_TCGA-DW-5560-01A-01R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null PC-3 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.99959 MAX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.4534 ETV2::HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.4377 HCC1428 CCLE Cell Line Gene CNV Profiles -1.0 -1.43721 HCC202 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.921245 DBP JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.1058 MDA-MB-468 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -0.857717 anterior (rostral) cingulate (medial prefrontal) cortex_1 yrs_F_12830 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.30742 globose nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.55478 binding GO Molecular Function Annotations 2015 1.0 null UACC812 CCLE Cell Line Gene CNV Profiles -1.0 -1.3588 ZNF549 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 37.0118 posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.04011 CHP212 CCLE Cell Line Gene CNV Profiles 1.0 1.75004 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5885-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null parasubicular cortex (parasubiculum) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.858365 rostral part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.972889 H3K27me3_astrocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mpkCCD cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.402 P32-ISH COSMIC Cell Line Gene Mutation Profiles 1.0 null scalp TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null WSU-NHL Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.32926 Lung squamous cell carcinoma_LUSC_TCGA-58-8391-01A-11R-2326-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ETV2::FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.5561 NCIH1563 CCLE Cell Line Gene CNV Profiles 1.0 2.19175 striatum_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.82674 CADO-ES1 COSMIC Cell Line Gene Mutation Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_24 pcw_M_12288 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.27652 POU4F3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.8792 JUND JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.7124 superior colliculus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.13493 NCIH2066 CCLE Cell Line Gene Expression Profiles -1.0 -1.88995 Lung squamous cell carcinoma_LUSC_TCGA-51-4081-01A-01R-1100-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NCI-H345 COSMIC Cell Line Gene Mutation Profiles 1.0 null CREB1 JASPAR Predicted Transcription Factor Targets 1.0 null SG in ventrolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.02061 anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.31558 TCF3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.4989 TCF4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 42.9221 FOXO4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.1689 skin GTEx Tissue Gene Expression Profiles 1.0 2.18987 Prostate adenocarcinoma_PRAD_TCGA-HC-7080-01A-11R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null superior frontal gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.32372 NFATC3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.4028 TLX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.5287 Rectum adenocarcinoma_READ_TCGA-AG-3902-01A-01R-A32Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NIHOVCAR3 CCLE Cell Line Gene CNV Profiles -1.0 -1.51637 Brain Lower Grade Glioma_LGG_TCGA-S9-A6WL-01A-21R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null ZBTB18 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.2911 fusiform gyrus, right, bank of cos Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.08543 trochlear nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.40674 UNCX JASPAR Predicted Human Transcription Factor Targets 2025 1.0 13.5489 NCIH522 CCLE Cell Line Gene CNV Profiles 1.0 1.52902 IFITM2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.39771 SG in inferolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.67124 CP in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.44369 hMPV_12Hour_18234263_GSE8961 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.57663 PANC1005 CCLE Cell Line Gene CNV Profiles 1.0 1.84549 ESR1_KD_GDS4061_453_human_MCF7 breast cancer cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Developmental Biology Reactome Pathways 2024 1.0 null AU565 CCLE Cell Line Gene CNV Profiles 1.0 2.51463 Prostate adenocarcinoma_PRAD_TCGA-FC-7708-01A-11R-2118-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXA1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.5342 HCC1143 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.44944 SNAI2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.6774 U87MG CCLE Cell Line Gene Expression Profiles -1.0 -1.49903 amygdaloid complex_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.906531 Lung squamous cell carcinoma_LUSC_TCGA-77-A5G3-01A-31R-A27Q-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Kidney renal clear cell carcinoma_KIRC_TCGA-BP-5201-01A-01R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null VZ in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.00861 IM-95 COSMIC Cell Line Gene Mutation Profiles 1.0 null ZNF93 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7929 SG in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.932335 occipital pole, left, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07288 anterior (rostral) cingulate (medial prefrontal) cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.04489 MAF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.0146 NR2F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.6928 TAF2-19829295-ESCS-HUMAN ChEA Transcription Factor Targets 2022 1.0 null H3K27me3_HepG2_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZR7530 CCLE Cell Line Gene CNV Profiles -1.0 -1.68674 MDA-MB-361 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.69874 ZNF100_01_124 KnockTF Gene Expression Profiles with Transcription Factor Perturbations 1.0 1.27457 ZBTB6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.7975 MDAMB453 CCLE Cell Line Gene CNV Profiles -1.0 -1.9841 MEF2A JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.5092 ZNF8 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.5219 RRP9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32243 TYK-NU.CP-R Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.28851 ZIC1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 71.9197 external granular (germinal) layer of upper rhombic lip Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.968886 hsa-miR-424 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 lateral habenular nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.39112 subcuneiform nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.16862 FOS JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.0509 hsa-miR-518a-5p TargetScan Predicted Nonconserved microRNA Targets 1.0 1.99187 Uterine corpus endometrial carcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.131 MEWO Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.70386 TWIST1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 36.0991 HCC38 CCLE Cell Line Gene CNV Profiles 1.0 1.35344 HCC1143 CCLE Cell Line Gene CNV Profiles -1.0 -1.57396 KPL1 CCLE Cell Line Gene CNV Profiles -1.0 -1.33283 upper (rostral) rhombic lip_8 pcw_M_13058 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.98018 paracentral lobule, posterior part, right, bank of cingulate sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.964614 TE-11 COSMIC Cell Line Gene Mutation Profiles 1.0 null anterior hypothalamic area, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.35743 TFG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.44266 TEF JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.8688 FOXL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.3834 protein complex GO Cellular Component Annotations 2015 1.0 null FOSL2::JUNB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.6849 Lung squamous cell carcinoma_LUSC_TCGA-39-5019-01A-01R-1820-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null UPK3B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89632 BECKER CCLE Cell Line Gene CNV Profiles -1.0 -2.81825 SKN-3 COSMIC Cell Line Gene Mutation Profiles 1.0 null 496100419_TCx_no dementia_TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.39252 ZBTB12 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.0669 HESX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.7324 FOXA3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.4318 NOMO-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null CORL88 CCLE Cell Line Gene CNV Profiles -1.0 -1.34944 FOXC1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.422 FOXP3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.2753 Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-7044-11A-01R-1965-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXK1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.0625 OAW42 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.919163 ZSCAN16 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.5091 SK-MEL-2 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.1498 whole body TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-94-8035-01A-11R-2247-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null internal segment of globus pallidus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.08862 JHH-7 COSMIC Cell Line Gene Mutation Profiles 1.0 null superior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.0683 253JBV CCLE Cell Line Gene Expression Profiles 1.0 1.45189 H3K27me3_HeLa-S3_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null LCLC-97TM1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.14872 COLO 699 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.08826 MFH-INO COSMIC Cell Line Gene Mutation Profiles 1.0 null primary visual cortex (striate cortex, area V1/17)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.52482 head TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null superior rostral gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.37881 Edinger-Westphal nucleus (accessory oculomotor nucleus) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.28726 JHESOAD1 CCLE Cell Line Gene CNV Profiles 1.0 1.75566 Whole body TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 lateral hypothalamic area, tuberal part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.86699 ZIM3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.4517 outer CP in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.956269 frontal pole, right, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.08903 HCC1171 CCLE Cell Line Gene CNV Profiles 1.0 1.43679 precentral gyrus, right, bank of the precentral sulcus Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.987158 EFM-19 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 2.44854 Kidney renal clear cell carcinoma_KIRC_TCGA-CJ-4882-01A-02R-1426-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Blood microparticle COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.664 outer CP in dorsomedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.951922 COLO 678 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.69557 FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.3174 EMX1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.6277 primary auditory cortex (core)_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.900822 ETV5::FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.779 hippocampus (hippocampal formation)_9 pcw_M_12833 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 0.833795 rostral ventral respiratory cell group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.01504 SNU283 CCLE Cell Line Gene Expression Profiles 1.0 1.4564 MKN-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.835729 PMC8995879-Table_1.xlsx-exome_variants_MAF_0_01-Gencode_34_hugoSymbol_MAF Rummagene Transcription Factor Associations 2026 1.0 null limitans nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.05158 HEP3B217 CCLE Cell Line Gene Expression Profiles 1.0 1.85235 NFE2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 21.4244 BACH1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.8518 Lung squamous cell carcinoma_LUSC_TCGA-43-3920-01A-01R-0980-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null paraventricular nucleus of the hypothalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.12661 GSE111061_1_v_0_tofacitinib_human RummaGEO Drug Perturbation Signatures -1.0 null SNRPG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.3201 NCIH1836 CCLE Cell Line Gene Expression Profiles -1.0 -2.17662 FOXO1::FLI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.2364 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-FU-A3HZ-01A-11R-A213-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null nucleus accumbens, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.39773 cuneiform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.85609 NCO2 CCLE Cell Line Gene Expression Profiles 1.0 1.73666 layer IIIu of area 35c Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.50054 EZH2_keratinocyte_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null CAPAN-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.46869 CTCF ENCODE Transcription Factor Targets 1.0 null hsa-miR-3927 TargetScan Predicted Nonconserved microRNA Targets 1.0 0.843347 IZ in primary auditory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.952529 orbital frontal cortex_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.12433 posterior (caudal) superior temporal cortex (area 22c)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.984402 paracentral lobule, anterior part, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.38932 FOS::JUND JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.0589 Liver hepatocellular carcinoma_LIHC_TCGA-CC-5263-01A-01R-A131-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null SNU-475 COSMIC Cell Line Gene Mutation Profiles 1.0 null COV504 CCLE Cell Line Gene CNV Profiles -1.0 -1.33283 intermediate filament cytoskeleton COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 EW-7 COSMIC Cell Line Gene Mutation Profiles 1.0 null POLR2A ENCODE Transcription Factor Targets 1.0 null SNU-638 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.0769 NR3C1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.8232 intracellular organelle part GO Cellular Component Annotations 2015 1.0 null Prostate adenocarcinoma_PRAD_TCGA-EJ-5522-01A-01R-1580-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null 496100420_PCx_probable Alzheimer's disease_no TBI_85_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.06916 orbital frontal cortex_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.58271 TC-71 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.44944 corpus callosum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.29225 NCI-H1792 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.23611 TCF3_GM12878_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null G111 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 0.834552 JIMT-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -2.58449 dorsolateral prefrontal cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -0.898873 RUNX3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.4375 CFPAC1 CCLE Cell Line Gene CNV Profiles 1.0 1.49159 animal TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null FOXF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.7778 MSX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.0686 PAQR9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.50302 posteroventral (inferior) parietal cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray -1.0 -1.02058 MHHES1 CCLE Cell Line Gene CNV Profiles -1.0 -2.0521 PL45 CCLE Cell Line Gene CNV Profiles 1.0 1.63819 Pheochromocytoma and Paraganglioma_PCPG_TCGA-W2-A7UY-01A-11R-A35L-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null Brain - Hippocampus GTEx Tissue Gene Expression Profiles 2023 1.0 7.21239 MAFA MotifMap Predicted Transcription Factor Targets 1.0 null FOSL1::JUNB JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.283 ZNF449 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.109 APEX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.68043 macromolecular complex COMPARTMENTS Curated Protein Localization Evidence Scores 1.0 0.03318 FOSL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.3744 FOSL2::JUND JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.7049 FU97 CCLE Cell Line Gene Expression Profiles 1.0 1.35389 GATA3-22897851-JUKARTE6-1-HUMAN ChEA Transcription Factor Targets 2022 1.0 null Lung squamous cell carcinoma_LUSC_TCGA-85-7697-01A-11R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hsa-miR-520g TargetScan Predicted Nonconserved microRNA Targets 1.0 0.965816 Ciliary pocket collar COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.861 NCI-H2198 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.20827 MAFG::NFE2L1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.3635 SUDHL1 CCLE Cell Line Gene CNV Profiles 1.0 2.07685 inner SZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.895145 USF2 JASPAR Predicted Transcription Factor Targets 1.0 null YT COSMIC Cell Line Gene Mutation Profiles 1.0 null hsa-miR-15b TargetScan Predicted Nonconserved microRNA Targets 1.0 0.880544 TCF12 ENCODE Transcription Factor Targets 1.0 null Brain Lower Grade Glioma_LGG_TCGA-TM-A84R-01A-21R-A36H-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OKAJIMA Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.07591 AP2S1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.4929 FOXK2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.3639 CAL-12T COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K27me3_endothelial cell of umbilical vein_hg19_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null skin TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null Edinger-Westphal nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.35434 IKZF1_01_138 KnockTF Gene Expression Profiles with Transcription Factor Perturbations -1.0 -0.6726 BLOC-1 complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.894 SBC5 CCLE Cell Line Gene Expression Profiles -1.0 -1.91025 RMGI CCLE Cell Line Gene CNV Profiles 1.0 1.44895 interpeduncular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.33206 GATA3 JASPAR Predicted Transcription Factor Targets 1.0 null E2F1-17053090-MCF7-human ChEA Transcription Factor Binding Site Profiles 1.0 null CEBPB JASPAR Predicted Transcription Factor Targets 1.0 null CFPAC-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.91996 striatum_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.31033 ZIC4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 56.8165 oculomotor nuclear complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.39856 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-C5-A7UE-01A-11R-A33Z-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null hippocampus (hippocampal formation)_21 pcw_F_12365 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.66013 Lymphoma_burkitts(Raji) BioGPS Human Cell Type and Tissue Gene Expression Profiles -1.0 -1.59926 mediodorsal nucleus of thalamus_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.16668 MAF::NFE2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.0193 ventrolateral prefrontal cortex_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray 1.0 1.01266 KPL-1 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles -1.0 -1.37019 ventromedial hypothalamic nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.987708 Lung adenocarcinoma_LUAD_TCGA-44-7667-01A-31R-2066-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null inner SZ in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.02287 NFIL3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.4929 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 1.0 null ETS2 MotifMap Predicted Transcription Factor Targets 1.0 null Kidney renal papillary cell carcinoma_KIRP_TCGA-BQ-5888-01A-11R-1592-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null CTCF_GM10248_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null Bladder Urothelial Carcinoma_BLCA_TCGA-E7-A677-01A-11R-A30C-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null FOXP2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 38.0809 Lung squamous cell carcinoma_LUSC_TCGA-22-4609-01A-21R-2125-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null OVMANA CCLE Cell Line Gene Expression Profiles 1.0 1.83511 FOXP4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.9454 frontal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.00742 LC-2-AD COSMIC Cell Line Gene Mutation Profiles 1.0 null ZBTB7C JASPAR Predicted Human Transcription Factor Targets 2025 1.0 39.6487 REST_Panc1_hg19_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null TFAP2A-17053090-MCF-7-HUMAN ChEA Transcription Factor Targets 2022 1.0 null LN340 CCLE Cell Line Gene Expression Profiles -1.0 -3.81491 MYC JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.8078 PITX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.3809 outer SZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.828398 FOSL2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.3663 temporal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.7655 inner CP in ventromedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.19689 CHP-212 Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles 1.0 1.43319 Cervical squamous cell carcinoma and endocervical adenocarcinoma_CESC_TCGA-MU-A8JM-01A-11R-A36F-07 TCGA Signatures of Differentially Expressed Genes for Tumors 1.0 null NUGC4 CCLE Cell Line Gene CNV Profiles 1.0 1.91502 interstitial nucleus of Cajal, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.925492 layer IIIu of area 35r Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.973451 GATA2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.8517 hsa-miR-4451 TargetScan Predicted Nonconserved microRNA Targets 1.0 1.0155 DMS454 CCLE Cell Line Gene Expression Profiles 1.0 1.61386 cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null HCC2998 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K27me3_GM12878_hg19_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null