association	dataset	threshold value	standardized value
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20679
HUP-T3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29898
TCF12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.5047
ZEB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.7269
FOSL2::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.4989
macromolecular complex	GO Cellular Component Annotations 2015	1.0	null
ZIC5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.4192
HNF1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.0052
NR3C2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.6055
MSC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.1
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.3484
EMX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.2977
496100391_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.1708
HCC2218	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68225
intermediate filament	GO Cellular Component Annotations 2015	1.0	null
OE33	COSMIC Cell Line Gene CNV Profiles	1.0	2.59653
head	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
RARA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	73.079
NCI-H1915	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.74918
ESR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.9254
A2058	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826298
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
Nonsyndromic deafness	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.149
FOXO4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.9705
PFEIFFER	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01995
AP-2rep	MotifMap Predicted Transcription Factor Targets	1.0	null
NKX6-1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.8106
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27855
organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.69719
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20679
FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.6848
intracellular	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
GSX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	12.8615
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.915738
small intestine	HPA Tissue Protein Expression Profiles	1.0	1.04592
GRHL2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7132
FOXP3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.2389
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.836
496100416_FWM_dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.36041
ZNF354C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.875
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.2965
496100367_FWM_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.68243
NFIL3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5117
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.94147
organelle part	GO Cellular Component Annotations 2015	1.0	null
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.995049
496100426_PCx_no dementia_TBI_90-94_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.50086
non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.956089
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37024
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.94147
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26035
gallbladder	HPA Tissue Protein Expression Profiles	1.0	1.04592
macromolecular complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
8305C	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NOTO	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.1394
BLOC complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.065
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841112
ZNF317	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.346
FAM156B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02947
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7778
Usher syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.219
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.839901
duodenum	HPA Tissue Protein Expression Profiles	1.0	1.04592
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.0772
CW-2	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51235
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21296
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.04257
ZNF582	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.1092
NR4A2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.0208
cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21296
ZBTB18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.3869
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.859563
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.956089
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.988149
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00266
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.995049
NCI-H2342	COSMIC Cell Line Gene Mutation Profiles	1.0	null
Intraciliary transport particle B	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.021
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20679
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.4082
urinary bladder	HPA Tissue Protein Expression Profiles	1.0	1.04592
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28811
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71082
PITX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9234
NKX6-2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.4488
OVCA420	COSMIC Cell Line Gene CNV Profiles	1.0	2.59653
cellular_component	GO Cellular Component Annotations 2015	1.0	null
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9794
ZIC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.2883
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42375
FERD3L	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.218
HOXC8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	12.9176
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30798
mpkCCD cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.621
SOX10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.3474
HCC1011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.995667
FOXG1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.5736
cytoskeletal part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
PPARD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.205
Developmental Biology	Reactome Pathways 2024	1.0	null
MXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.1545
Keratin-associated protein	InterPro Predicted Protein Domain Annotations	1.0	null
496100458_FWM_no dementia_no TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.13487
IKZF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.3934
AGS	COSMIC Cell Line Gene Mutation Profiles	1.0	null
3M complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.812
496100409_FWM_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.07917
ESR2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.5429
VAX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.0807
HT-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979076
Intraciliary transport particle A	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.973
intracellular organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78685
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3288
Nuclear exosome targeting complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.189
NR2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	71.3639
FOSL2::JUND	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.7677
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.28781
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54752
intermediate filament cytoskeleton	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
rectum	HPA Tissue Protein Expression Profiles	1.0	1.04592
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20679
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.35003
MHH-NB-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924963
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.4349
CLOCK	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.0864
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.956089
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.04971
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16808
FOS	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.9124
THRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.6506
scalp	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
intracellular part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
BBSome	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.844
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08519
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12346
GSE160817_7_v_8_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
NB13	COSMIC Cell Line Gene CNV Profiles	1.0	2.59653
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.5354
adipose tissue	GTEx Tissue Gene Expression Profiles	1.0	1.1979
SREBF1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.3364
HT-144	COSMIC Cell Line Gene CNV Profiles	1.0	2.59653
496100420_PCx_probable Alzheimer's disease_no TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.69967
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.4505
DBP	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0807
FOXP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.5363
U-87-MG	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MYC	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.037
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841112
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
PGR	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8165
EB-3	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SK-MEL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54995
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16924
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.5807
ME-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.1596
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
MYF6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.2
PMC12224929-ADVS-12-2416784-s006.xlsx-DEG_circGLIS3_KD-Unnamed_6_AR	Rummagene Transcription Factor Associations 2026	1.0	null
FOXP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.8995
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71371
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.58317
CAPAN-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.59653
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.4352
496100469_TCx_no dementia_TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	4.99952
NR1D1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3632
HNF4A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	44.7584
496100460_TCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.60397
CAL-72	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.893643
POU6F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.269
JHH-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30059
TFAP4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	64.1241
3-M syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.797
cell part	GO Cellular Component Annotations 2015	1.0	null
OAW42	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.927292
HOXB3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.8558
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04654
NDUFA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01001
HEB	MotifMap Predicted Transcription Factor Targets	1.0	null
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
GSX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.112
NR1I2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.7355
NALM-6	COSMIC Cell Line Gene Mutation Profiles	1.0	null
GID complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.254
NR4A1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.6015
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.388
BCL6B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.6102
SRY	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9286
NPHP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.091
skin	GTEx Tissue Gene Expression Profiles	1.0	2.18987
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.8757
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851896
FOXK1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4962
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8924
Keratinization	Reactome Pathways 2024	1.0	null
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.8185
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5339
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.6582
ZNF680	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	51.675
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44892
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24676
Intraciliary transport particle	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	0.896
FOSB::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9402
FOXI1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6468
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09149
protein complex	GO Cellular Component Annotations 2015	1.0	null
A-673	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.75436
Cornified envelope	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.527
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.2389
PPARG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.7857
TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.3272
SLU7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10788
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36496
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.981567
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.915738
cytoskeletal part	GO Cellular Component Annotations 2015	1.0	null
FOXK2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3274
MDA-MB-436	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HOXA7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	13.1221
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
ZBTB7C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.2497
ASCL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	109.214
496100466_PCx_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	3.08771
MYCN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5195
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.5277
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851896
NKX2-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7981
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02071
organelle part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56671
BACH2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	41.347
Ciliary base	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.019
JDP2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4635
ZNF24	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.2548
intermediate filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
FOXS1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6176
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36958
SCRT2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.336
PMC4823830-ncomms11171-s3.xlsx-high_in_shRNA_GATA3-GeneSymbol_GATA3	Rummagene Transcription Factor Associations 2026	1.0	null
ERF::FIGLA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.7139
keratin filament	GO Cellular Component Annotations 2015	1.0	null
BACH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7728
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23486
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
CEBPD	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.942
JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0085
ZIC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	80.3576
SNAI2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	37.7742
SOX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.4635
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.4288
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.873776
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
Joubert syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.218
TAL1::TCF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.5682
496100419_TCx_no dementia_TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	6.55771
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.9234
496100472_PCx_possible Alzheimer's disease_TBI_100+_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.25669
NCI-H1092	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27855
NRL	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.3451
intracellular part	GO Cellular Component Annotations 2015	1.0	null
HOXB2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.2251
NFYA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.056
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.915073
TRAPP complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.076
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.852559
integument	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NOL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.9248
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826298
HNF4, COUP	MotifMap Predicted Transcription Factor Targets	1.0	null
NKX2-8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.5343
ZBTB12	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1922
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	48.588
RXRB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.3457
cell part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
SU-DHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41079
FOSL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0912
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3288
NB13	COSMIC Cell Line Gene Mutation Profiles	1.0	null
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52328
Brain - Hippocampus	GTEx Tissue Gene Expression Profiles 2023	1.0	7.21239
OCUB-M	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MYOD1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	30.8242
FOXA1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.9584
GSE160817_7_v_1_slamf6_human	RummaGEO Gene Perturbation Signatures	-1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.915738
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.84038
NR2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.6928
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
TAL1	MotifMap Predicted Transcription Factor Targets	1.0	null
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36874
BLOC-1 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.165
HUTU-80	COSMIC Cell Line Gene Mutation Profiles	1.0	null
prostate	GTEx Tissue Gene Expression Profiles	1.0	0.925105
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.9556
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67852
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48197
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851896
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56671
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44892
496100421_PCx_probable Alzheimer's disease_TBI_88_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	5.40625
NR3C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.4263
keratin filament	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
skin	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850876
Collecting duct cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.279
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841112
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1375
NR2C1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.533
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4217
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62871
PLC/PRF/5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05774
FOSL1::JUNB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.471
PDX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.5318
CEBPG	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.4067
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
intracellular organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
YH-13	COSMIC Cell Line Gene CNV Profiles	1.0	2.59653
HEC-1-A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02223
FOXO6	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.8745
GABPA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4177
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27855
COLO 792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.927292
TBCD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15795
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01656
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09044
intracellular non-membrane-bounded organelle	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
PITX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.6605
KLF13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.7579
protein complex	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
496100418_TCx_no dementia_TBI_85_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	7.65926
RFX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9805
cell	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.03318
intracellular organelle part	GO Cellular Component Annotations 2015	1.0	null
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.902203
FOSL1::JUN	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9286
ZNF324	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.0538
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21296
PMC12315503-FSB2-35-e21179-s002.pdf-4-MXD1_MXD1	Rummagene Transcription Factor Associations 2026	1.0	null
SNU-638	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09149
TC-71	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.44892
TCF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	49.2918