association	dataset	threshold value	standardized value
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00434
male reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
OVTOKO	CCLE Cell Line Gene Expression Profiles	1.0	1.4719
SNU466	CCLE Cell Line Gene Expression Profiles	1.0	1.38323
JHH2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36074
OV56	CCLE Cell Line Gene Expression Profiles	1.0	1.63231
NCIH1792	CCLE Cell Line Gene Expression Profiles	-1.0	-1.90199
PSN1	CCLE Cell Line Gene CNV Profiles	1.0	1.48715
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23077
primary motor cortex (area M1, area 4)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.843739
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.925279
U266B1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83581
primary visual cortex (striate cortex, area V1/17)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.852166
KMS26	CCLE Cell Line Gene CNV Profiles	1.0	1.6775
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855674
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71486
SW 527	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07664
NCIH2227	CCLE Cell Line Gene Expression Profiles	-1.0	-1.7809
SPI1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inferolateral temporal cortex (area TEv, area 20)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.11267
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72613
posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.27105
dorsolateral prefrontal cortex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.71489
Diabetes Mellitus	CTD Gene-Disease Associations	1.0	1.04794
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38329
ISTMES1	CCLE Cell Line Gene Expression Profiles	1.0	1.61712
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.59612
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896889
YAPC	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
disease of anatomical entity	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.932337
CAL78	CCLE Cell Line Gene CNV Profiles	1.0	1.33873
U266B1	CCLE Cell Line Gene Expression Profiles	1.0	1.85727
ventrolateral prefrontal cortex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.21594
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97003
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
Respiratory Tract Diseases	CTD Gene-Disease Associations	1.0	1.18026
DMS-53	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
NCIH1755	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.031362
SCLC-21H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36205
CORL47	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36729
NCI-H810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855027
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.8316
CGTHW1	CCLE Cell Line Gene CNV Profiles	1.0	1.43959
primary somatosensory cortex (area S1, areas 3,1,2)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.2654
KYSE-50	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
NCIH2291	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.504
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09502
KMS-28PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36205
DMS53	CCLE Cell Line Gene CNV Profiles	1.0	1.91982
SW 480	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.915021
H3K9me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924741
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.84593
SUPT11	CCLE Cell Line Gene Expression Profiles	-1.0	-2.07602
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60006
mediodorsal nucleus of thalamus_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.997423
H3K4me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HH	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59012
MOLT16	CCLE Cell Line Gene Expression Profiles	-1.0	-1.64633
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890991
CtIP_DEPLETION_GDS2189_122_human_MCF10A mammary epithelial cells (MECs)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
ventrolateral prefrontal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.10002
MZ1-PC	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
OCIAML2	CCLE Cell Line Gene Expression Profiles	1.0	1.98433
HT1376	CCLE Cell Line Gene CNV Profiles	-1.0	-2.35089
NCI-H661	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.944979
STAT3	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC1954	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02375
primary somatosensory cortex (area S1, areas 3,1,2)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.855886
P31FUJ	CCLE Cell Line Gene Expression Profiles	1.0	2.35053
abnormality of metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.054847
orbital frontal cortex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.23131
KLE	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
VMRCRCW	CCLE Cell Line Gene Expression Profiles	1.0	1.52009
STAT6	MotifMap Predicted Transcription Factor Targets	1.0	null
MDAMB157	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78532
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the eye	GWASdb SNP-Phenotype Associations	1.0	0.099017
posteroventral (inferior) parietal cortex_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.893188
SCLC21H	CCLE Cell Line Gene Expression Profiles	-1.0	-1.82803
endocrine gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
abnormal eye morphology	GWASdb SNP-Phenotype Associations	1.0	0.133658
posterior (caudal) superior temporal cortex (area 22c)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.20173
BICR31	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6971
disease	GWASdb SNP-Disease Associations	1.0	0.025083
KARPAS299	CCLE Cell Line Gene Expression Profiles	1.0	1.97259
CALU-6	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
ventrolateral prefrontal cortex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.876528
ELF1	ENCODE Transcription Factor Targets	1.0	null
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10887
mediodorsal nucleus of thalamus_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.53364
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30334
NCI-H1755	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.44301
CTCF_GM20000_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
adipose tissue	GTEx Tissue Gene Expression Profiles	1.0	0.926492
dorsolateral prefrontal cortex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.962408
NCI-H322M	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
hippocampus (hippocampal formation)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.951806
SW620	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
posteroventral (inferior) parietal cortex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.69313
SPI1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
female reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
DANG	CCLE Cell Line Gene CNV Profiles	1.0	1.60065
primary visual cortex (striate cortex, area V1/17)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.29216
NCIH1836	CCLE Cell Line Gene Expression Profiles	-1.0	-1.85209
LMSU	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12565
cardiovascular system disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.932337
KE39	CCLE Cell Line Gene CNV Profiles	1.0	2.00291
diabetic retinopathy	GWASdb SNP-Disease Associations	1.0	0.912987
MV411	CCLE Cell Line Gene Expression Profiles	1.0	2.02952
heart conduction disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.932337
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.953671
NCIH1838	CCLE Cell Line Gene Expression Profiles	1.0	1.69482
U2OS	CCLE Cell Line Gene Expression Profiles	-1.0	-2.16225
H2AFZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855997
amygdaloid complex_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.917436
eye and adnexa disease	GWASdb SNP-Disease Associations	1.0	0.136017
H3K9me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SKM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44751
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43315
striatum_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.37437
KG1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.93863
inferolateral temporal cortex (area TEv, area 20)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.825109
posteroventral (inferior) parietal cortex_10 mos_M_12977	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.862207
SNU478	CCLE Cell Line Gene CNV Profiles	1.0	1.48275
KMS-28BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33694
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.986542
female reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.48923
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16211
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06622
NCIH838	CCLE Cell Line Gene CNV Profiles	1.0	1.68813
PL4	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
IALM	CCLE Cell Line Gene CNV Profiles	1.0	1.39487
hippocampus (hippocampal formation)_1 yrs_F_12830	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.88955
membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
CHP212	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50957
A-CA-04-2009(H1N1)_3Hour_None_GSE37571	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.10414
ALK_KD_GDS2724_105_human_DAOY medulloblastoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
orbital frontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.971779
SNU1196	CCLE Cell Line Gene CNV Profiles	1.0	2.59965
SKM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3364
DAN-G	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
all	GWASdb SNP-Phenotype Associations	1.0	0.031309
POLR2A	ENCODE Transcription Factor Targets	1.0	null
striatum_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13609
SW900	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
ECC10	CCLE Cell Line Gene Expression Profiles	-1.0	-1.57137
YAPC	CCLE Cell Line Gene CNV Profiles	1.0	1.71888
KASUMI6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74494
KMRC3	CCLE Cell Line Gene Expression Profiles	1.0	1.83981
SPI1	ENCODE Transcription Factor Targets	1.0	null
CHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.5557
AMO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.936445
amygdaloid complex_2 yrs_F_12979	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.39102
Dhori Virus_24Hour_20090954_GSE17400	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.30832
amygdaloid complex_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.954843
hippocampus (hippocampal formation)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.01215
P12ICHIKAWA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47958
H2869	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
abnormality of the posterior segment of the eye	GWASdb SNP-Phenotype Associations	1.0	0.217042
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
NCIH1915	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32036
orbital frontal cortex_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.74372
SH10TC	CCLE Cell Line Gene CNV Profiles	1.0	1.81838
H3K4me1_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H1915	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55165
abnormality of carbohydrate metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.217042
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11644
heart disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.932337
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36244
primary motor cortex (area M1, area 4)_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.914474
CFPAC1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.80279
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.925279
testis	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NR3C1-21868756-MCF10A-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
membrane part	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
KP-1N	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979834
IRF1	ChEA Transcription Factor Targets	1.0	null
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.92084
NOMO1	CCLE Cell Line Gene Expression Profiles	1.0	2.65491
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
NUDHL1	CCLE Cell Line Gene Expression Profiles	1.0	3.40805
HCC1806	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.944979
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0642
hippocampus (hippocampal formation)_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.54842
animal	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.52589
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.953671
INA6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45095
inferolateral temporal cortex (area TEv, area 20)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.39555
GATA3_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
salivary gland	GTEx Tissue Gene Expression Profiles	1.0	1.29499
hippocampus (hippocampal formation)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.912945
KMS28BM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57915
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16722
253J	CCLE Cell Line Gene Expression Profiles	1.0	1.46754
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.06617
integral component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
RKN	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
eye disease	GWASdb SNP-Disease Associations	1.0	0.136017
primary auditory cortex (core)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.832446
A4/FUK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.20852
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.853327
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.50761
hippocampus (hippocampal formation)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.25543
striatum_23 yrs_M_12300	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.83249
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.862741
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.43176
BC3C	CCLE Cell Line Gene Expression Profiles	-1.0	-2.16407
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
posteroventral (inferior) parietal cortex_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.06049
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64766
abnormality of the endocrine system	GWASdb SNP-Phenotype Associations	1.0	0.095471
plasma membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
primary somatosensory cortex (area S1, areas 3,1,2)_4 mos_M_12296	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.833355
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21178
H3K4me2_B cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
primary auditory cortex (core)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.17959
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28428
T84	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
primary somatosensory cortex (area S1, areas 3,1,2)_30 yrs_F_12290	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.37629
NCIH2196	CCLE Cell Line Gene CNV Profiles	1.0	1.32786
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
spleen	GTEx Tissue Gene Expression Profiles	1.0	1.14225
abnormality of the globe	GWASdb SNP-Phenotype Associations	1.0	0.133658
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10887
tissues, cell types and enzyme sources	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
dorsolateral prefrontal cortex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.40118
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42054
abnormality of the fundus	GWASdb SNP-Phenotype Associations	1.0	0.217042
NCIH196	CCLE Cell Line Gene CNV Profiles	-1.0	-2.08078
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55669
RKN	CCLE Cell Line Gene CNV Profiles	1.0	1.75165
U87MG	CCLE Cell Line Gene Expression Profiles	1.0	1.42942
CAMA1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51358
retinal disease	GWASdb SNP-Disease Associations	1.0	0.226475
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924741
primary motor cortex (area M1, area 4)_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.09619
OAW-28	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
NCI-H196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.07453
nervous system disease	GWASdb SNP-Disease Associations	1.0	0.059772
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23077
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01405
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.924741
primary visual cortex (striate cortex, area V1/17)_26 pcw_F_12949	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.56849
HT-1376	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.44301
COLO 206F	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23556
ELF1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hippocampus (hippocampal formation)_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.00116
hippocampus (hippocampal formation)_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.32279
RH30	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74844
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06622
posteroventral (inferior) parietal cortex_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.862207
786O	CCLE Cell Line Gene Expression Profiles	1.0	1.38752
GAK	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
HUG1N	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
T84	CCLE Cell Line Gene Expression Profiles	-1.0	-1.57583
orbital frontal cortex_15 yrs_M_12299	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.02774
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33308
intrinsic component of membrane	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
primary visual cortex (striate cortex, area V1/17)_16 pcw_M_12837	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.832295
primary auditory cortex (core)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.79063
internal male genital organ	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
dorsolateral prefrontal cortex_21 pcw_F_12365	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.853026
SR786	CCLE Cell Line Gene Expression Profiles	1.0	2.29387
SUPT11	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43136
KE39	CCLE Cell Line Gene Expression Profiles	1.0	1.58051
LU-99A	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
primary visual cortex (striate cortex, area V1/17)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.901965
primary motor cortex (area M1, area 4)_21 pcw_M_12886	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.08665
CHAGOK1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59696
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16211
A4-FUK	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.802966
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.915021
pancreas	GTEx Tissue Gene Expression Profiles	-1.0	-1.1624
primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.895108
PA-TU-8902	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.915021
primary somatosensory cortex (area S1, areas 3,1,2)_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.42018
urogenital system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
amygdaloid complex_37 yrs_M_12303	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.13255
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47951
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82369
EZH2	ENCODE Transcription Factor Targets	1.0	null
NCI-H441	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
Asthma_Epithelial Cell_GSE4302	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.91788
hippocampus (hippocampal formation)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.950307
RERFLCAD1	CCLE Cell Line Gene CNV Profiles	1.0	1.34377
NCIH2106	CCLE Cell Line Gene Expression Profiles	-1.0	-1.49558
A-Vietnam-1203_CIP048_RG4-2004(H5N1)NS1trunc_7Hour_None_GSE43204	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.41537
MEWO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51735
DU-145	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0642
TT	CCLE Cell Line Gene CNV Profiles	1.0	1.55056
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.856558
reproductive system	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
hippocampus (hippocampal formation)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.991661
RT11284	CCLE Cell Line Gene Expression Profiles	1.0	1.57079
THP1	CCLE Cell Line Gene Expression Profiles	1.0	1.47664
male reproductive gland	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17986
amygdaloid complex_36 yrs_M_12302	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.01687
primary motor-sensory cortex (samples)_19 pcw_F_12885	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.909283
inferolateral temporal cortex (area TEv, area 20)_21 yrs_F_13057	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-3.15645
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.936445
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
posterior (caudal) superior temporal cortex (area 22c)_3 yrs_M_12980	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.32713
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.89035
abnormal glucose homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.235093
sensory system disease	GWASdb SNP-Disease Associations	1.0	0.11186
primary motor cortex (area M1, area 4)_40 yrs_F_12304	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-2.71142
caudal ganglionic eminence_8 pcw_M_13058	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.852166
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45598
SU8686	CCLE Cell Line Gene CNV Profiles	1.0	1.41462
DETROIT562	CCLE Cell Line Gene Expression Profiles	-1.0	-1.61507
SW 900	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26994
SCLC21H	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51714
disease	DISEASES Experimental Gene-Disease Association Evidence Scores	1.0	0.932337
NCI-H2172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.94724
MEC2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.56795
KURAMOCHI	CCLE Cell Line Gene CNV Profiles	1.0	2.09579
NCI-H727	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
membrane	LOCATE Predicted Protein Localization Annotations	1.0	null
amygdaloid complex_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.89013
NR3C1	ChEA Transcription Factor Targets	1.0	null
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16722
PANC0213	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50922
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.953671
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10887
primary auditory cortex (core)_12 pcw_F_13060	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.52234
posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12841	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.939611
HUPT4	CCLE Cell Line Gene Expression Profiles	-1.0	-1.75823
H3K9me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
retinal vascular disease	GWASdb SNP-Disease Associations	1.0	0.465839
JHH7	CCLE Cell Line Gene Expression Profiles	1.0	1.35711
IRF1-21803131-MONOCYTES-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
KLE	CCLE Cell Line Gene CNV Profiles	1.0	1.89071
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26406
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.925279
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00434
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77442
NCI-H2009	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890991
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855027
JHH-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16722
NCIH929	CCLE Cell Line Gene CNV Profiles	-1.0	-1.72527
UMC-11	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
NCIH1781	CCLE Cell Line Gene Expression Profiles	-1.0	-2.16771
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.5523
gonad	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
NCI-H838	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
PA-TU-8902	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
SPI1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.894609
primary visual cortex (striate cortex, area V1/17)_24 pcw_M_12288	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.31436
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.77131
primary somatosensory cortex (area S1, areas 3,1,2)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.16217
cellular_component	COMPARTMENTS Curated Protein Localization Evidence Scores	1.0	0.098109
GATA3	ENCODE Transcription Factor Targets	1.0	null
253JBV	CCLE Cell Line Gene Expression Profiles	1.0	1.54865
abnormality of the retina	GWASdb SNP-Phenotype Associations	1.0	0.235093
HCC1395	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
primary motor cortex (area M1, area 4)_12 pcw_F_12835	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.967002
primary somatosensory cortex (area S1, areas 3,1,2)_4 yrs_M_12298	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.91763
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09502
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979834
ELF1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KURAMOCHI	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
NCI-H2373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39756
primary auditory cortex (core)_17 pcw_F_12880	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	1.04342
NCI-H1734	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
KMRC2	CCLE Cell Line Gene Expression Profiles	-1.0	-2.13697
LOX-1_OE_GDS4262_435_human_HAECT - aortic endothelial cell line - 24 Hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.855997
CHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09432
whole body	TISSUES Curated Tissue Protein Expression Evidence Scores	1.0	null
CAMA-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30334
mediodorsal nucleus of thalamus_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-0.870741
A4FUK	CCLE Cell Line Gene CNV Profiles	1.0	2.20633
SNU245	CCLE Cell Line Gene CNV Profiles	1.0	2.3639
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
SNU283	CCLE Cell Line Gene Expression Profiles	1.0	1.89648
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47316
primary motor cortex (area M1, area 4)_13 pcw_F_12834	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.85194
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.028192
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.996498
parietal neocortex_9 pcw_M_12833	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	0.902769
SNU16	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45175
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03764
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.35049
CTCF	ENCODE Transcription Factor Targets	1.0	null
retinopathy	GWASdb SNP-Phenotype Associations	1.0	0.802966
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.93613
HS616T	CCLE Cell Line Gene Expression Profiles	-1.0	-2.08825
IA-LM	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
pituitary	GTEx Tissue Gene Expression Profiles	-1.0	-2.10021
mediodorsal nucleus of thalamus_16 pcw_M_12287	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	1.0	2.96208
CAL-85-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.05441
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.06487
HCT116	CCLE Cell Line Gene Expression Profiles	1.0	1.52776
primary motor cortex (area M1, area 4)_3 yrs_F_12836	Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by Microarray	-1.0	-1.54842