association	dataset	threshold value	standardized value
HEC-1-A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.885134
NUGC4	CCLE Cell Line Gene CNV Profiles	1.0	1.37004
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11846
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873094
SNU-1040	COSMIC Cell Line Gene Mutation Profiles	1.0	null
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.9416
POLR2A_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38937
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00492
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03194
HCC70	CCLE Cell Line Gene CNV Profiles	1.0	1.64939
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.872536
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16389
bipolar affective disorder	GWASdb SNP-Phenotype Associations	1.0	0.55536
105KC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.97963
IGR1	CCLE Cell Line Gene CNV Profiles	1.0	1.78005
TMD8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28816
NCIH2347	CCLE Cell Line Gene CNV Profiles	-1.0	-2.10354
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
NCIH1876	CCLE Cell Line Gene CNV Profiles	1.0	1.57515
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.059145
HCC1954	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.16635
KM12	COSMIC Cell Line Gene Mutation Profiles	1.0	null
TYK-NU.CP-R	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0315
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1023
NCI-H2347	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.98607
GLC82	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38322
CTCF_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LC4-1	COSMIC Cell Line Gene Mutation Profiles	1.0	null
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45216
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.941056
NUDHL1	CCLE Cell Line Gene CNV Profiles	1.0	1.47952
MAFF_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.831577
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CAL78	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71942
depression	GWASdb SNP-Phenotype Associations	1.0	0.374155
mood disorder	GWASdb SNP-Disease Associations	1.0	0.316634
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65416
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09757
OVCA420	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01854
NCIH446	CCLE Cell Line Gene CNV Profiles	1.0	2.81579
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.61594
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
H3K9me3_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SW 982	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.64429
A-375	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16389
CTCF	ENCODE Transcription Factor Targets	1.0	null
MAFK	ENCODE Transcription Factor Targets	1.0	null
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26411
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33084
HEL9217	CCLE Cell Line Gene CNV Profiles	1.0	2.36092
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26411
abnormal emotion/affect behavior	GWASdb SNP-Phenotype Associations	1.0	0.288859
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
NCIH1755	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46311
NCIH2141	CCLE Cell Line Gene CNV Profiles	1.0	1.41438
bipolar disorder	GWASdb SNP-Disease Associations	1.0	0.650844
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29778
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14497
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23031
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36354
HCC2157	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33138
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.907396
NCI-H630	COSMIC Cell Line Gene Mutation Profiles	1.0	null
PK-45P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1681
mania	GWASdb SNP-Phenotype Associations	1.0	0.55536
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02099
HELA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07843
disease	GWASdb SNP-Disease Associations	1.0	0.032225
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.873094
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00492
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.885866
MG-63	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20665
specific developmental disorder	GWASdb SNP-Disease Associations	1.0	0.215576
HCC1806	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.868745
SNU119	CCLE Cell Line Gene CNV Profiles	1.0	1.44151
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.52895
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26356
HCC1143	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67196
SKCO1	CCLE Cell Line Gene CNV Profiles	1.0	1.33983
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02099
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1954	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
SR786	CCLE Cell Line Gene CNV Profiles	-1.0	-2.16957
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.973204
attention deficit hyperactivity disorder	GWASdb SNP-Disease Associations	1.0	0.511507
KYSE450	CCLE Cell Line Gene CNV Profiles	1.0	1.38477
THP1	CCLE Cell Line Gene CNV Profiles	1.0	1.61004
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.839632
NCIH2196	CCLE Cell Line Gene CNV Profiles	1.0	1.73084
H3K4me1_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SUPHD1	CCLE Cell Line Gene CNV Profiles	1.0	1.86176
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.986596
SW1417	COSMIC Cell Line Gene Mutation Profiles	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11588
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23753
H2AFZ_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ES3	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.01237
behavioral abnormality	GWASdb SNP-Phenotype Associations	1.0	0.163075
obsessive-compulsive disorder	GWASdb SNP-Disease Associations	1.0	0.511507
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.526
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23915
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ME-180	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
psychosis	GWASdb SNP-Phenotype Associations	1.0	0.436737
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12082
MDAMB453	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
SNU-175	COSMIC Cell Line Gene Mutation Profiles	1.0	null
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.950395
EC-GI-10	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
POLR2A	ENCODE Transcription Factor Targets	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78442
BT474	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91703
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14497
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.595
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Premature aging_Skin fibroblast_GSE10123	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.7957
gilles de la tourette syndrome	GWASdb SNP-Disease Associations	1.0	0.511507
MAFF	ENCODE Transcription Factor Targets	1.0	null
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02099
anxiety disorder	GWASdb SNP-Disease Associations	1.0	0.272715
NCI-H2347	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.01237
SNU213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4305
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05919
TE10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33344
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.972803
HCC1171	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52737
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.907396
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.8514
HCC1954	CCLE Cell Line Gene CNV Profiles	1.0	2.04853
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55497
developmental disorder of mental health	GWASdb SNP-Disease Associations	1.0	0.181298
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.868804
JIYOYE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19118
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41859
T84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20716
MOR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14546
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934929
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33084
CAL33	CCLE Cell Line Gene CNV Profiles	1.0	1.59756
cognitive disorder	GWASdb SNP-Disease Associations	1.0	0.172817
HCC4006	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15973
ECGI10	CCLE Cell Line Gene CNV Profiles	1.0	2.07868
RDES	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71359
NB4	CCLE Cell Line Gene CNV Profiles	1.0	1.5372
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36512
MG63	CCLE Cell Line Gene CNV Profiles	1.0	2.70405
FADU	CCLE Cell Line Gene CNV Profiles	1.0	1.85981
HEL	CCLE Cell Line Gene CNV Profiles	1.0	2.15915
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16389
HUT78	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33138
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33138
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00338
LB2241-RCC	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57361
SNU-638	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05819
PLC/PRF/5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.950395
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
abnormality of nervous system physiology	GWASdb SNP-Phenotype Associations	1.0	0.091006
KYSE520	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62552
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26662
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.1018
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26411
SW982	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.01237
H9	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.01237
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33084
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.88084
breast	GTEx Tissue Gene Expression Profiles	1.0	1.29389
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40161
DANG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43421
HCC4006	CCLE Cell Line Gene CNV Profiles	1.0	1.36893
COLO-824	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
all	GWASdb SNP-Phenotype Associations	1.0	0.029998
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OVCAR-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.997056
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71146
HT55	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.01237
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00759
NCI-H446	COSMIC Cell Line Gene CNV Profiles	1.0	2.08839
BT-474	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.99371
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21453
Celiac Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.030036
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29778
disease of mental health	GWASdb SNP-Disease Associations	1.0	0.119065
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26356
PATU8988S	CCLE Cell Line Gene CNV Profiles	-1.0	-1.85763
H2AFZ_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41859
GB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50528
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.885866
THP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90928
EBC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58115
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
S117	CCLE Cell Line Gene CNV Profiles	1.0	1.87337
tic disorder	GWASdb SNP-Disease Associations	1.0	0.511507
SW1271	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48619
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26356
NCIH889	CCLE Cell Line Gene CNV Profiles	1.0	1.37784
LUDLU1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.97004
NCIH716	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39937
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.76881
LN443	CCLE Cell Line Gene CNV Profiles	1.0	1.48041
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40161
SQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65443
EB2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.855875
HCC1428	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6756
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30384
NCI-H2023	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14497
KYSE70	CCLE Cell Line Gene CNV Profiles	1.0	1.33804
HT55	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447