association	dataset	threshold value	standardized value
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.04627
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.834666
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28969
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848339
SW1271	CCLE Cell Line Gene CNV Profiles	1.0	1.69293
1321N1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60762
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	2.13957
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.892554
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963664
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23367
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.965941
SNU449	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00251
NCIH929	CCLE Cell Line Gene CNV Profiles	1.0	1.38462
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80237
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48025
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.04627
T3M10	CCLE Cell Line Gene CNV Profiles	1.0	1.46209
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12079
BT474	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40921
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922696
NUGC4	CCLE Cell Line Gene CNV Profiles	1.0	1.58733
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13621
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.878266
TE9	CCLE Cell Line Gene CNV Profiles	1.0	1.93083
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67734
A172	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55878
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.965941
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851342
JHOS4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57496
NCIH841	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86258
OCIMY7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54745
A-Vietnam-1203_CIP048_RG4-2004(H5N1)NS1trunc_3Hour_None_GSE43204	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.50132
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04793
SKES1	CCLE Cell Line Gene CNV Profiles	1.0	1.77355
SUDHL10	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41425
PK59	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42064
brain	GTEx Tissue Gene Expression Profiles	1.0	1.29671
NCIH1355	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3832
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.13047
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851342
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04103
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11267
SW1573	CCLE Cell Line Gene CNV Profiles	-1.0	-2.36155
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90423
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.43242
NCIH1651	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34456
NCIH2172	CCLE Cell Line Gene CNV Profiles	-1.0	-2.15588
RAF1_activemutant_219_GSE42964	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.60983
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53478
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.834666
HCC89	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12196
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851342
A172	CCLE Cell Line Gene CNV Profiles	-1.0	-1.93168
BHT101	CCLE Cell Line Gene CNV Profiles	1.0	1.72341
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08444
JMSU1	CCLE Cell Line Gene CNV Profiles	1.0	1.37999
GSS	CCLE Cell Line Gene CNV Profiles	-1.0	-3.14764
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922696
MDAMB361	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76933
FU97	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34355
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851342
MDA-MB-453	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.17043
NCIH1781	CCLE Cell Line Gene CNV Profiles	1.0	1.56936
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01926
HUPT4	CCLE Cell Line Gene CNV Profiles	1.0	1.82984
OAW28	CCLE Cell Line Gene CNV Profiles	1.0	1.45948
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1875
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84061
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.952671
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.897258
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848339
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54688
AU565	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45896
OCUM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24321
DMS454	CCLE Cell Line Gene CNV Profiles	-1.0	-2.56621
HCC1143	CCLE Cell Line Gene CNV Profiles	1.0	2.15401
KE39	CCLE Cell Line Gene CNV Profiles	1.0	1.51833
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24246
NCIH727	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12852
624 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.6669
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.922696
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04103
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850612
LN-229	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848339
JHOS-4	COSMIC Cell Line Gene CNV Profiles	-1.0	-5.12655
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.851342
BT20	CCLE Cell Line Gene CNV Profiles	1.0	2.00692
HCC38	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.993488
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.89465
RPMI7951	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34855
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4066
estradiol_mus musculus_gpl4134_gse23072	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01848
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.970524
EW8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63939
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.874841
BEN	CCLE Cell Line Gene CNV Profiles	1.0	1.64681
A3KAW	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5125
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13621
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16436
A-VN-1203-2004(H5N1)_Day7-10^3pfu_22074594_GSE33263	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.65148
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70822
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20829
ES2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67735
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48435
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.30859
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1867
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.40576
SNU601	CCLE Cell Line Gene CNV Profiles	1.0	1.42748
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01848
DMS114	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46458
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.8009
BICR16	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71687
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45982
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.72308
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24869
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.963664
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16436
EFO21	CCLE Cell Line Gene CNV Profiles	1.0	1.52221
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.72456
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62647
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23904
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.895799
NCIH28	CCLE Cell Line Gene CNV Profiles	1.0	1.58631
SQ1	CCLE Cell Line Gene CNV Profiles	1.0	1.32852
estradiol_mus musculus_gpl4134_gse23241	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
JHOS2	CCLE Cell Line Gene CNV Profiles	1.0	1.86365
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848339
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850612
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03269
HCC1599	CCLE Cell Line Gene CNV Profiles	1.0	2.36415
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.893264
NCIH1734	CCLE Cell Line Gene CNV Profiles	1.0	1.34726