association	dataset	threshold value	standardized value
ME-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977304
SW 780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.89379
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28317
LU99	CCLE Cell Line Gene CNV Profiles	1.0	2.20946
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03989
FADU	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3954
HCC44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.01479
RPMI7951	CCLE Cell Line Gene CNV Profiles	1.0	1.39541
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49672
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.17966
IGR1	CCLE Cell Line Gene CNV Profiles	1.0	1.43947
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.83583
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2085
UMUC3	CCLE Cell Line Gene CNV Profiles	1.0	1.52316
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53214
HCC44	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33885
SCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.919273
NCIH1963	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50432
MDAMB361	CCLE Cell Line Gene CNV Profiles	-1.0	-1.89243
SNU-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.980188
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15686
NUDUL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57823
A498	CCLE Cell Line Gene CNV Profiles	1.0	1.86115
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4147
NCIH650	CCLE Cell Line Gene CNV Profiles	1.0	1.52462
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.918477
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02696
BT474	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43562
LUDLU1	CCLE Cell Line Gene CNV Profiles	1.0	1.33134
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869178
KYSE450	CCLE Cell Line Gene CNV Profiles	1.0	1.82487
NCI-H2009	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.83684
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.919273
TE5	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
HCC2911	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.943085
EB1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.33287
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935408
PANC0403	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41027
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08099
YD38	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65526
PANC 05.04	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.89299
HT-55	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.980188
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09219
G44	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935408
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2119
OVSAHO	CCLE Cell Line Gene CNV Profiles	1.0	2.00948
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53082
HARA	CCLE Cell Line Gene CNV Profiles	1.0	1.40253
KYSE520	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35466
NCIH716	CCLE Cell Line Gene CNV Profiles	-1.0	-2.00401
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2085
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.877046
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.61743
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.40101
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39975
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08099
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70714
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08099
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977304
DOR 13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844468
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.918477
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70865
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7223
SCABER	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
OVCA 429	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01581
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869178
RERFLCAD2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76682
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22513
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.64337
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869178
SNU308	CCLE Cell Line Gene CNV Profiles	1.0	1.33679
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844468
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.18161
NCIH1930	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
JHOS4	CCLE Cell Line Gene CNV Profiles	1.0	2.36415
HCC1395	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57893
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.918477
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19469
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.829836
U2OS	CCLE Cell Line Gene CNV Profiles	1.0	1.62111
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2085
SBC5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47292
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.829836
PANC 02.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28317
NCIH747	CCLE Cell Line Gene CNV Profiles	1.0	1.5114
143B	CCLE Cell Line Gene CNV Profiles	1.0	1.71114
NCIH1568	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09288
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.926183
HCC1359	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.89379
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22513
CGTHW1	CCLE Cell Line Gene CNV Profiles	1.0	2.59998
A-498	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28317
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09304
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1469
HCC89	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2105
BT20	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35088
HUH7	CCLE Cell Line Gene CNV Profiles	1.0	1.52365
TE1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50331
HCC95	CCLE Cell Line Gene CNV Profiles	1.0	1.34142
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869178
SQ1	CCLE Cell Line Gene CNV Profiles	1.0	1.44938
NCIH2009	CCLE Cell Line Gene CNV Profiles	-1.0	-1.80333
KE39	CCLE Cell Line Gene CNV Profiles	-1.0	-2.34989
SNU-1040	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.83684
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08099
SW1271	CCLE Cell Line Gene CNV Profiles	1.0	1.79647
CAL-85-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12808
CAL851	CCLE Cell Line Gene CNV Profiles	1.0	1.36984
DMS 273	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.926183
NCIH727	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20388
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.55746
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70161
MPP89	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69096
LMSU	CCLE Cell Line Gene CNV Profiles	1.0	1.90817
OCIMY7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56882
BFTC905	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68653
VMRCLCP	CCLE Cell Line Gene CNV Profiles	1.0	2.09281
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.987606
EJM	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39576
RERFLCSQ1	CCLE Cell Line Gene CNV Profiles	1.0	1.69498
CPCN	CCLE Cell Line Gene CNV Profiles	1.0	1.6563
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09262
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98676
SNUC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.89828
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06889
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14144
OV7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.844468
LOU-NH91	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09137