association	dataset	threshold value	standardized value
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.972166
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.12612
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.972166
G84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836791
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0459
ARHGDIB_Transfection_GDS4455_551_human_UM-UC-3 bladder carcinoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
G59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60713
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45086
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04697
placenta	HPA Tissue Gene Expression Profiles	1.0	2.24804
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41594
VPRBP_KD_GDS4829_90_human_DU145 prostate cancer cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98288
MHH-PREB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.45498
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.59689
TE1	CCLE Cell Line Gene CNV Profiles	1.0	2.63952
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11169
membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
HPBALL	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88588
placenta_6b	HPA Tissue Sample Gene Expression Profiles	1.0	1.22936
small intestine	HPA Tissue Protein Expression Profiles	1.0	1.53841
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67075
HH	CCLE Cell Line Gene CNV Profiles	1.0	1.36428
CDK4_knockdown_133_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.60902
NCI-H2347	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.917656
HDLM2	CCLE Cell Line Gene CNV Profiles	1.0	1.40071
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.35083
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07164
CDK2_knockdown_132_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.41026
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882426
SNU503	CCLE Cell Line Gene CNV Profiles	1.0	2.77903
PPARA_agonist activation_GSE17251_474_human_Isolated hepatocytes	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07164
NCIH23	CCLE Cell Line Gene CNV Profiles	1.0	1.69515
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1545
KMS-21BM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98288
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04697
T98G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28699
NUGC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850974
EWS502	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37012
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45086
placenta_3a	HPA Tissue Sample Gene Expression Profiles	1.0	2.76943
MDA-MB-175-VII	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.983928
NCIH1838	CCLE Cell Line Gene CNV Profiles	1.0	1.49928
BICR18	CCLE Cell Line Gene CNV Profiles	1.0	1.50216
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951129
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52272
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957229
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4844
LAMA84	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40514
DMS454	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34356
KMH2	CCLE Cell Line Gene CNV Profiles	1.0	1.48976
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1545
duodenum	HPA Tissue Gene Expression Profiles	-1.0	-0.853318
intracellular organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
COLO320	CCLE Cell Line Gene CNV Profiles	1.0	1.91916
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.59689
22RV1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.0193
OVMANA	CCLE Cell Line Gene CNV Profiles	1.0	1.43227
organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2559
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1545
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.916581
HCC15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57296
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.83889
salivary gland	HPA Tissue Gene Expression Profiles	-1.0	-0.853318
JURKAT, CLONE E6-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.45796
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957229
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52154
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882426
OAW28	CCLE Cell Line Gene CNV Profiles	1.0	1.57773
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.983207
intracellular part	LOCATE Predicted Protein Localization Annotations	1.0	null
BFTC-909	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951129
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4844
skin	HPA Tissue Gene Expression Profiles	1.0	0.955659
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850974
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28595
SNU175	CCLE Cell Line Gene CNV Profiles	-1.0	-2.37
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11442
J82	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33603
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15865
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02582
HCC2218	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09131
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.972166
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.54913
stomach	HPA Tissue Gene Expression Profiles	-1.0	-0.853318
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45327
HT	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04415
A2780	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53419
NCIH2141	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36362
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0459
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03269
HCC1500	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55541
appendix	HPA Tissue Gene Expression Profiles	-1.0	-0.853318
placenta_6c	HPA Tissue Sample Gene Expression Profiles	1.0	0.969583
G120	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951129
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951129
SUM 52PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26322
nucleus	LOCATE Predicted Protein Localization Annotations	1.0	null
pancreas	HPA Tissue Gene Expression Profiles	-1.0	-0.853318
duodenum	HPA Tissue Protein Expression Profiles	1.0	1.53841
LNCAP	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02582
urinary bladder	HPA Tissue Gene Expression Profiles	-1.0	-0.853318
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850974
NCIH2052	CCLE Cell Line Gene CNV Profiles	1.0	2.03836
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03269
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.33232
MKN45	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63744
SNUC2A	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82552
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45086
HS729	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58722
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45327
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.66863
DETROIT562	CCLE Cell Line Gene CNV Profiles	1.0	2.42321
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.56288
MDAPCA2B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73145
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.915539
NCI-H28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951129
BC3C	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44103
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850974
NCIH211	CCLE Cell Line Gene CNV Profiles	1.0	1.54048
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.915539
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896226
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.882426
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45086
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.852034
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42822
FADU	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46677
OCIAML2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81245
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.957229
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896226
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62364
SK-N-SH	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15865
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.972166
cytoplasm	LOCATE Predicted Protein Localization Annotations	1.0	null
intracellular membrane-bounded organelle	LOCATE Predicted Protein Localization Annotations	1.0	null
LNCAPCLONEFGC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69915
KHM-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.850974
HT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.245
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28595
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41699
HCC1599	CCLE Cell Line Gene CNV Profiles	1.0	2.14132
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25412
A172	CCLE Cell Line Gene CNV Profiles	1.0	1.88319
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.981796
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25311
OVCAR-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97973
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67194
SCC4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41737
cell part	LOCATE Predicted Protein Localization Annotations	1.0	null
NCIH69	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46292
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41699
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.76213
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.880334
HCC1195	CCLE Cell Line Gene CNV Profiles	1.0	1.55563
JURKAT	CCLE Cell Line Gene CNV Profiles	-1.0	-2.29687
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.917656
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82151
EW8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40254
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.537
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82151
EFO21	CCLE Cell Line Gene CNV Profiles	1.0	1.47726
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.28699
cellular_component	LOCATE Predicted Protein Localization Annotations	1.0	null
BICR56	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7974
HCC1187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951129
L1236	CCLE Cell Line Gene CNV Profiles	1.0	2.02509
UACC893	CCLE Cell Line Gene CNV Profiles	1.0	1.44467
SUPHD1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.80925
647V	CCLE Cell Line Gene CNV Profiles	1.0	1.75089
NCIH1623	CCLE Cell Line Gene CNV Profiles	1.0	1.75483
KLM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.951129
MOLT13	CCLE Cell Line Gene CNV Profiles	-1.0	-2.4224
L428	CCLE Cell Line Gene CNV Profiles	1.0	1.45268
OAW28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.22982
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.896226
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45327
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37975
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52272
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45327