association	dataset	threshold value	standardized value
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2942
H3K9me3_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
carbohydrate metabolism disease	GWASdb SNP-Disease Associations	1.0	0.274706
lymphatic system disease	GWASdb SNP-Disease Associations	1.0	0.445313
BXPC-3	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the urinary system	GWASdb SNP-Phenotype Associations	1.0	1.00059
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.89869
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36416
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.040527
Fetal Brain Male	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-0.948434
KLM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.974139
GABPA_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
arterial stenosis	GWASdb SNP-Phenotype Associations	1.0	0.236125
RT4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57152
OCILY3	CCLE Cell Line Gene CNV Profiles	1.0	1.96066
ES-I3 Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.3989
TRIM28_U2OS_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
atherosclerosis	GWASdb SNP-Phenotype Associations	1.0	0.298087
neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.04159
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850527
OUMS-23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13619
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06116
H3K4me1_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
immune system disease	GWASdb SNP-Disease Associations	1.0	0.054427
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.93201
JUND_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.886345
H3K27ac_Brain Anterior Caudate	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
abnormal emotion/affect behavior	GWASdb SNP-Phenotype Associations	1.0	0.247927
COLO678	CCLE Cell Line Gene CNV Profiles	-1.0	-1.9806
nervous system disease	GWASdb SNP-Disease Associations	1.0	0.044969
PL4	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
abnormality of the systemic arterial tree	GWASdb SNP-Phenotype Associations	1.0	0.132257
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18654
RFX5_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04193
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LI7	CCLE Cell Line Gene CNV Profiles	-1.0	-2.17017
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16445
diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.288859
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
HL60	CCLE Cell Line Gene CNV Profiles	1.0	1.38972
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2942
abnormality of the uterus	GWASdb SNP-Phenotype Associations	1.0	0.296384
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67804
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32363
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961504
COLO-678	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.919074
neoplasm by anatomical site	GWASdb SNP-Phenotype Associations	1.0	0.042769
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23719
DMS53	CCLE Cell Line Gene CNV Profiles	1.0	1.6383
abnormality of the coronary arteries	GWASdb SNP-Phenotype Associations	1.0	0.298087
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.845605
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08356
mood disorder	GWASdb SNP-Disease Associations	1.0	0.266988
JUND_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PECAPJ49	CCLE Cell Line Gene CNV Profiles	-1.0	-1.85985
RT4	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
FOS_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
abnormality of the endometrium	GWASdb SNP-Phenotype Associations	1.0	0.434882
arteriosclerosis	GWASdb SNP-Phenotype Associations	1.0	0.263067
H3K27me3_Adult Liver	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
DMS454	CCLE Cell Line Gene CNV Profiles	1.0	1.39744
Primary hematopoietic stem cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.20925
OCIMY5	CCLE Cell Line Gene CNV Profiles	1.0	2.32861
abnormality of the vasculature	GWASdb SNP-Phenotype Associations	1.0	0.094419
abnormality of the cardiovascular system	GWASdb SNP-Phenotype Associations	1.0	0.046721
abnormality of nervous system physiology	GWASdb SNP-Phenotype Associations	1.0	0.050138
HCC1187	CCLE Cell Line Gene CNV Profiles	1.0	1.37628
neurodegenerative disease	GWASdb SNP-Disease Associations	1.0	0.230887
endometrial carcinoma	GWASdb SNP-Phenotype Associations	1.0	0.434882
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39829
ECGI10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5491
H3K9ac_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
C-33 A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.906051
AU565	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60616
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
GRANTA519	CCLE Cell Line Gene CNV Profiles	1.0	1.47205
T84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06158
female reproductive organ cancer	GWASdb SNP-Disease Associations	1.0	0.271824
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50055
FOS_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36416
NCIH889	CCLE Cell Line Gene CNV Profiles	1.0	2.10333
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864985
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
lymph node disease	GWASdb SNP-Disease Associations	1.0	0.720109
bipolar affective disorder	GWASdb SNP-Phenotype Associations	1.0	0.425311
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.882308
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.44929
TRIM28	ENCODE Transcription Factor Targets	1.0	null
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82703
KDM5A	ENCODE Transcription Factor Targets	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11839
MDA-MB-330	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
abnormality of body weight	GWASdb SNP-Phenotype Associations	1.0	0.328563
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.825392
CEBPB	ENCODE Transcription Factor Targets	1.0	null
overnutrition	GWASdb SNP-Disease Associations	1.0	0.435218
abnormal internal genitalia	GWASdb SNP-Phenotype Associations	1.0	0.126361
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851277
kidney disease	GWASdb SNP-Disease Associations	1.0	1.14463
H3K9me3_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K9ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26699
KMS26	CCLE Cell Line Gene CNV Profiles	1.0	1.95732
FRA1	MotifMap Predicted Transcription Factor Targets	1.0	null
kawasaki disease	GWASdb SNP-Disease Associations	1.0	0.720109
SNU1033	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81307
FADU	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
OPM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851277
H3K4me1_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.57412
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9ac_Brain Inferior Temporal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
type 2 diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.650844
SW954	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
GABPA	ENCODE Transcription Factor Targets	1.0	null
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961126
HCC1395	CCLE Cell Line Gene CNV Profiles	1.0	1.40031
EZH2	ENCODE Transcription Factor Targets	1.0	null
abnormality of female internal genitalia	GWASdb SNP-Phenotype Associations	1.0	0.136396
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.054102
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08978
ME-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.953455
H3K4me3_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCIH747	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35654
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1078
H3K27me3_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13619
abnormality of nervous system morphology	GWASdb SNP-Phenotype Associations	1.0	0.060602
H2AFZ_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
insulin resistance	GWASdb SNP-Phenotype Associations	1.0	0.55536
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08781
G140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961504
Skeletal Muscle Female	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-1.58509
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17873
NFYB	ENCODE Transcription Factor Targets	1.0	null
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38309
AP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10825
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16445
RMUGS	CCLE Cell Line Gene CNV Profiles	-1.0	-2.45138
abnormalities of the peripheral arteries	GWASdb SNP-Phenotype Associations	1.0	0.236125
59M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.985489
NAMALWA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42686
MINO	CCLE Cell Line Gene CNV Profiles	1.0	1.46141
NCI-H1963	COSMIC Cell Line Gene CNV Profiles	1.0	2.14731
abnormal glucose homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.308684
HCC95	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67468
FOSL2_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
uterine neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.347702
abnormality of the endocrine system	GWASdb SNP-Phenotype Associations	1.0	0.080524
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23719
bipolar disorder	GWASdb SNP-Disease Associations	1.0	0.498119
abnormal genital system morphology	GWASdb SNP-Phenotype Associations	1.0	0.08779
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1963	CCLE Cell Line Gene CNV Profiles	1.0	2.37569
SW 1116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06116
mania	GWASdb SNP-Phenotype Associations	1.0	0.425311
central nervous system disease	GWASdb SNP-Disease Associations	1.0	0.079684
H3K9ac_Brain Substantia Nigra	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
CL14	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38002
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851277
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864613
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23935
SPI1_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DMS-53	COSMIC Cell Line Gene CNV Profiles	1.0	2.14731
JUND	ENCODE Transcription Factor Targets	1.0	null
SPI1	ENCODE Transcription Factor Targets	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851277
FOS_MCF 10A_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disease of cellular proliferation	GWASdb SNP-Disease Associations	1.0	0.03544
obesity	GWASdb SNP-Phenotype Associations	1.0	0.55536
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06158
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50983
lymphadenitis	GWASdb SNP-Disease Associations	1.0	0.720109
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.98031
ES-WA7 Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-0.920841
NCI-H596	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26652
KP2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3848
HARA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36958
BXPC3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.95019
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.914707
HCC1359	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38022
FADU	CCLE Cell Line Gene CNV Profiles	-1.0	-2.47056
FOS_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
reproductive organ cancer	GWASdb SNP-Disease Associations	1.0	0.180726
dementia	GWASdb SNP-Disease Associations	1.0	0.326011
COLO668	CCLE Cell Line Gene CNV Profiles	1.0	1.57589
RFX5	ENCODE Transcription Factor Targets	1.0	null
OCIMY7	CCLE Cell Line Gene CNV Profiles	1.0	1.51844
SUM 229PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.886345
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03555
NCIH146	CCLE Cell Line Gene CNV Profiles	1.0	1.72155
YAPC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46663
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.18826
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30643
ZBTB33_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PANC0504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76166
nutrition disease	GWASdb SNP-Disease Associations	1.0	0.367172
FOSL2	ENCODE Transcription Factor Targets	1.0	null
RI1	CCLE Cell Line Gene CNV Profiles	1.0	3.05807
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.52118
EZH2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.937846
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18654
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04193
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6435
GOS3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71686
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36462
H3K9ac_Brain Anterior Caudate	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06158
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29008
diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.316634
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.860543
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16314
alzheimer's disease	GWASdb SNP-Disease Associations	1.0	0.509303
SKMM2	CCLE Cell Line Gene CNV Profiles	1.0	2.25404
abnormality of the genitourinary system	GWASdb SNP-Phenotype Associations	1.0	0.1079
abnormality of metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.076787
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19231
coronary artery disease	GWASdb SNP-Phenotype Associations	1.0	0.620318
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.864985
SU8686	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49355
SUPT20H	ENCODE Transcription Factor Targets	1.0	null
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32363
SW 900	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961603
HCC1937	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4225
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.12555
RFX5_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disease of mental health	GWASdb SNP-Disease Associations	1.0	0.061757
GSS	CCLE Cell Line Gene CNV Profiles	-1.0	-2.11605
NCI-H2126	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50983
SW1573	COSMIC Cell Line Gene CNV Profiles	-1.0	-2.91612
SW 480	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.974139
NCO2	CCLE Cell Line Gene CNV Profiles	1.0	1.42082
uterine cancer	GWASdb SNP-Disease Associations	1.0	0.397505
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.52118
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03555
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.851277
MHHCALL2	CCLE Cell Line Gene CNV Profiles	1.0	1.68035
ME1	CCLE Cell Line Gene CNV Profiles	1.0	1.3445
cancer	GWASdb SNP-Disease Associations	1.0	0.035877
growth abnormality	GWASdb SNP-Phenotype Associations	1.0	0.253791
genital neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.220311
disease of metabolism	GWASdb SNP-Disease Associations	1.0	0.165876
SW1573	CCLE Cell Line Gene CNV Profiles	-1.0	-2.79947
OVCAR-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.88514
increased body weight	GWASdb SNP-Phenotype Associations	1.0	0.55536
abnormality of carbohydrate metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.288859
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
alzheimer disease	GWASdb SNP-Phenotype Associations	1.0	0.435093
H2AFZ_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUPT20H_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886511
TMD8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58551
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77575
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.999306
NFYB_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUPHD1	CCLE Cell Line Gene CNV Profiles	1.0	1.83724
glucose metabolism disease	GWASdb SNP-Disease Associations	1.0	0.274706
EBC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39292
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.59474
HCC2270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1078
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.3618
NCIH69	CCLE Cell Line Gene CNV Profiles	1.0	1.83202
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ZBTB33	ENCODE Transcription Factor Targets	1.0	null
depression	GWASdb SNP-Phenotype Associations	1.0	0.344869
BICR31	CCLE Cell Line Gene CNV Profiles	1.0	1.39905
RT4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67871
NCIH2126	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37069
CORL95	CCLE Cell Line Gene CNV Profiles	1.0	1.75853
all	GWASdb SNP-Phenotype Associations	1.0	0.04781
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961126
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.63068
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.961504
RFX5_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WSU-FSCCL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.35702
cognitive disorder	GWASdb SNP-Disease Associations	1.0	0.155008
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14076
obesity	GWASdb SNP-Disease Associations	1.0	0.650844
SW 1990	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03555
endometrial cancer	GWASdb SNP-Disease Associations	1.0	0.509021
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04193
RKN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.867311
H3K9me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
EZH2_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04193
tauopathy	GWASdb SNP-Disease Associations	1.0	0.509303
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.934454
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.27068
type ii diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.55536
neoplasm of the genitourinary tract	GWASdb SNP-Phenotype Associations	1.0	0.148985
abnormality of the female genitalia	GWASdb SNP-Phenotype Associations	1.0	0.136396
RAMOS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42686
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0806
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.52118
COV644	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06158
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3246
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850527
H3K4me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
CEBPB_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acquired metabolic disease	GWASdb SNP-Disease Associations	1.0	0.256801
behavioral abnormality	GWASdb SNP-Phenotype Associations	1.0	0.082111
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.98031
disease	GWASdb SNP-Disease Associations	1.0	0.044086
urinary system disease	GWASdb SNP-Disease Associations	1.0	0.234824
abnormality of the genital system	GWASdb SNP-Phenotype Associations	1.0	0.077094
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46315
POLR2AphosphoS5_neural cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_Duodenum Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HL-60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58406
organ system cancer	GWASdb SNP-Disease Associations	1.0	0.037364
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
morphological abnormality of the central nervous system	GWASdb SNP-Phenotype Associations	1.0	0.067378