association	dataset	threshold value	standardized value
MCAS	CCLE Cell Line Gene Expression Profiles	-1.0	-1.93446
SLR24	CCLE Cell Line Gene Expression Profiles	1.0	1.92098
HEC251	CCLE Cell Line Gene Expression Profiles	-1.0	-1.47724
H3K4me1_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me2_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H2AFZ_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CAL 54	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932849
H3K4me3_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
MAX_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2126	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10052
SUDHL8	CCLE Cell Line Gene CNV Profiles	1.0	2.0192
STAT2_02_18	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.70044
GATA3_T47D_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SCC-9	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09749
SNUC2A	CCLE Cell Line Gene CNV Profiles	1.0	1.44817
CEBPB_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXA2_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.951613
NCIH1299	CCLE Cell Line Gene CNV Profiles	1.0	1.36353
A-Vietnam-1203_CIP048_RG3-2004(H5N1)_24Hour_None_GSE43203	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.7055
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.986769
NCIH1563	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50297
H3K27ac_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1317
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0379
EM2	CCLE Cell Line Gene CNV Profiles	1.0	2.10598
NCI-H1648	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23313
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25293
KDM5A	ENCODE Transcription Factor Targets	1.0	null
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78945
FOXA1	ENCODE Transcription Factor Targets	1.0	null
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61947
H3K9ac_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HS751T	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83555
L428	CCLE Cell Line Gene CNV Profiles	1.0	1.48896
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10052
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32267
COLO 205	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00581
NCO2	CCLE Cell Line Gene CNV Profiles	1.0	1.81
H3K4me3_Caco-2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
LOXIMVI	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20312
LN215	CCLE Cell Line Gene Expression Profiles	-1.0	-1.58171
GATA2	ENCODE Transcription Factor Targets	1.0	null
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00625
substance abuse	GWASdb SNP-Disease Associations	1.0	0.333992
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.21427
BEN	CCLE Cell Line Gene Expression Profiles	1.0	1.56528
DU4475	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67661
SUDHL8	CCLE Cell Line Gene Expression Profiles	1.0	1.50116
TUHR14TKB	CCLE Cell Line Gene Expression Profiles	1.0	1.77204
MAX_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1648	CCLE Cell Line Gene CNV Profiles	1.0	1.79803
LAMA84	CCLE Cell Line Gene CNV Profiles	1.0	1.69044
NCIH358	CCLE Cell Line Gene Expression Profiles	-1.0	-2.03813
SLR21	CCLE Cell Line Gene Expression Profiles	1.0	2.62197
CEBPB_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
M059K	CCLE Cell Line Gene CNV Profiles	1.0	1.65178
TP63-22573176-HFKS-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
disease of mental health	GWASdb SNP-Disease Associations	1.0	0.082497
HUH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932849
NCI-H2347	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26915
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02491
H3K4me3_kidney epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
OCI-AML2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.962913
H3K4me3_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me2_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
kidney disease	GWASdb SNP-Disease Associations	1.0	1.03399
DND41	CCLE Cell Line Gene Expression Profiles	-1.0	-1.73557
MFM-223	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
H3K4me3_A549_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.42773
GCIY	CCLE Cell Line Gene Expression Profiles	1.0	2.13763
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
urinary system disease	GWASdb SNP-Disease Associations	1.0	0.220922
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860625
HS 940.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61947
AP-2rep	MotifMap Predicted Transcription Factor Targets	1.0	null
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10829
KS1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.75731
RL952	CCLE Cell Line Gene CNV Profiles	-1.0	-1.67289
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
PL-21	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14539
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25293
COLO775	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55419
SH4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.53499
CEBPB_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4533
PEER	CCLE Cell Line Gene CNV Profiles	-1.0	-2.3514
TCF12_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPD	ENCODE Transcription Factor Targets	1.0	null
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.61078
UMRC6	CCLE Cell Line Gene Expression Profiles	1.0	1.95573
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0789
NCIH1581	CCLE Cell Line Gene Expression Profiles	-1.0	-1.46376
H3K4me3_epithelial cell of proximal tubule_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
KU812	CCLE Cell Line Gene CNV Profiles	1.0	1.5435
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06314
TEAD4_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EP300_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU423	CCLE Cell Line Gene CNV Profiles	1.0	1.46722
COLO 206F	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.12605
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887596
SW1710	CCLE Cell Line Gene Expression Profiles	1.0	1.67561
OSRC2	CCLE Cell Line Gene Expression Profiles	1.0	1.35517
H3K4me3_A549_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
POLR2A_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SP1_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EP300_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXA1_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LN-229	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26915
PCM6	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37816
CAOV4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45894
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.860625
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
RAJI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2633
L-363	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61947
DKMG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32218
SKMES1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.56327
BT-483	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30123
SMC3	ENCODE Transcription Factor Targets	1.0	null
H3K4me1_Stomach Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
KMS27	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68377
THP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56736
JHOM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40051
alcohol dependence	GWASdb SNP-Disease Associations	1.0	0.769887
JHOC5	CCLE Cell Line Gene CNV Profiles	1.0	1.94308
TOV21G	CCLE Cell Line Gene Expression Profiles	1.0	1.44878
MDS - Myelodysplastic syndrome_Bone marrow stem cell_GSE4619	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-2.21014
cardiovascular system disease	GWASdb SNP-Disease Associations	1.0	0.529293
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887596
H3K4me3_epithelial cell of proximal tubule_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CEBPB_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.951613
RCC4	CCLE Cell Line Gene Expression Profiles	1.0	3.40766
TEAD4	ENCODE Transcription Factor Targets	1.0	null
A-Netherlands-602-2009(H1N1)_48Hour_None_GSE40844	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.63879
U266B1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.64677
ARID3A	ENCODE Transcription Factor Targets	1.0	null
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.926878
RERFGC1B	CCLE Cell Line Gene Expression Profiles	-1.0	-1.62053
SKRC31	CCLE Cell Line Gene Expression Profiles	1.0	2.04605
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.878284
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAX_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1623	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81657
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
E2A	MotifMap Predicted Transcription Factor Targets	1.0	null
substance-related disorder	GWASdb SNP-Disease Associations	1.0	0.258701
NCI-H1650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39315
alcohol abuse	GWASdb SNP-Disease Associations	1.0	0.769887
SP1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BRCA1_DEPLETION_GDS2189_121_human_MCF10A mammary epithelial cells (MECs)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.78799
UMRC2	CCLE Cell Line Gene Expression Profiles	1.0	1.40031
MFE-280	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
A-CA-04-2009(H1N1)_48Hour_None_GSE37571	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.43563
SNU869	CCLE Cell Line Gene CNV Profiles	-1.0	-3.20999
UT7	CCLE Cell Line Gene CNV Profiles	1.0	1.78688
H3K4me1_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
COR-L311	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
MYC_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU601	CCLE Cell Line Gene CNV Profiles	1.0	1.49093
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34458
H2AK5ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
E2F6	ENCODE Transcription Factor Targets	1.0	null
SNU761	CCLE Cell Line Gene Expression Profiles	1.0	1.34967
cSARS Bat SRBD_36Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.57932
MAX_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPB_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_HepG2_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
FOXP1_01_88	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	1.44442
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.84499
GATA2_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
substance dependence	GWASdb SNP-Disease Associations	1.0	0.258701
NUGC4	CCLE Cell Line Gene Expression Profiles	1.0	1.56325
GATA3_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.844618
COLO 792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26915
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00581
CAPAN1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09184
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45215
YH13	CCLE Cell Line Gene Expression Profiles	-1.0	-1.78964
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02609
H3K4me1_Pancreatic Islets	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
GCIY	CCLE Cell Line Gene CNV Profiles	1.0	2.59991
HCT8	CCLE Cell Line Gene Expression Profiles	-1.0	-2.38138
JUN	ENCODE Transcription Factor Targets	1.0	null
TOV-112D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932849
ARID3A_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCILY19	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3672
H3K4me3_kidney epithelial cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
COLO678	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4986
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41837
CAKI2	CCLE Cell Line Gene Expression Profiles	1.0	1.78102
253J	CCLE Cell Line Gene Expression Profiles	1.0	1.71342
TMD8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41638
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48527
H3K27me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52736
CORL311	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
CEBPB	ENCODE Transcription Factor Targets	1.0	null
PANC1	CCLE Cell Line Gene CNV Profiles	1.0	1.63843
EP300_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GATA3	ENCODE Transcription Factor Targets	1.0	null
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.970274
SLR26	CCLE Cell Line Gene Expression Profiles	1.0	1.52191
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.845324
JUND_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41619
MBD4_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the urinary system	GWASdb SNP-Phenotype Associations	1.0	0.907455
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.033657
abnormality of the genitourinary system	GWASdb SNP-Phenotype Associations	1.0	0.07086
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38004
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57545
FOXA2	ENCODE Transcription Factor Targets	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
MAX_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
SK-MEL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06982
FOXA1_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.865543
SNU349	CCLE Cell Line Gene Expression Profiles	1.0	1.61443
MAP2K1_knockdown_134_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.91387
disease	GWASdb SNP-Disease Associations	1.0	0.03554
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.951613
TYKNU	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84018
MYC	ENCODE Transcription Factor Targets	1.0	null
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.879447
NCI-H1781	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932849
JUN_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
HCC89	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64346
NCIH2227	CCLE Cell Line Gene Expression Profiles	-1.0	-1.52669
SMC3_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SPI1	ENCODE Transcription Factor Targets	1.0	null
A-CA-04-2009(H1N1)_48Hour_None_GSE40844	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-1.82544
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.879447
abnormality of the cardiovascular system	GWASdb SNP-Phenotype Associations	1.0	0.040893
RI1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52531
cSARS Bat SRBD_24Hour_None_GSE37827	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.31241
MYC_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ARID3A_02_50	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.02554
GMS10	CCLE Cell Line Gene Expression Profiles	-1.0	-2.15735
REST	ENCODE Transcription Factor Targets	1.0	null
MESSA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32918
253JBV	CCLE Cell Line Gene Expression Profiles	1.0	1.63486
REST_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38004
FOXA1_HepG2_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1355	CCLE Cell Line Gene Expression Profiles	-1.0	-1.67564
SBC5	CCLE Cell Line Gene Expression Profiles	-1.0	-1.807
all	GWASdb SNP-Phenotype Associations	1.0	0.032879
COLO201	CCLE Cell Line Gene Expression Profiles	-1.0	-1.79122
TP63	ChEA Transcription Factor Targets	1.0	null
MBD4	ENCODE Transcription Factor Targets	1.0	null
H3K4me3_HepG2_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
UACC-257	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06314
NCIH1395	CCLE Cell Line Gene CNV Profiles	-1.0	-1.96914
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10052
GATA3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
A704	CCLE Cell Line Gene Expression Profiles	1.0	2.25277
E2F6_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOXA1_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.032949
TYK-NU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.21357
G59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13026
MPP89	CCLE Cell Line Gene Expression Profiles	-1.0	-2.43354
NUGC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.932849
BT20	CCLE Cell Line Gene CNV Profiles	1.0	2.28541
SNU1272	CCLE Cell Line Gene Expression Profiles	1.0	1.38933
POLR2A	ENCODE Transcription Factor Targets	1.0	null
H3K27ac_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CEBPB_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.887596
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16733
MDAMB361	CCLE Cell Line Gene CNV Profiles	1.0	1.4717
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10942
KMRC20	CCLE Cell Line Gene Expression Profiles	1.0	1.47391
CAL54	CCLE Cell Line Gene Expression Profiles	1.0	2.42131
CEBPB_HepG2_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCUB-M	COSMIC Cell Line Gene CNV Profiles	1.0	2.76305
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48652
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.951613
SP1	ENCODE Transcription Factor Targets	1.0	null
H3K27me3_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC1534	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.85276
ABL1_knockdown_137_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.76239
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.42773
SW1990	CCLE Cell Line Gene Expression Profiles	-1.0	-1.65208
HH	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45038
SNU878	CCLE Cell Line Gene Expression Profiles	1.0	1.37177
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.10678
H3K4me3_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
THP1	CCLE Cell Line Gene CNV Profiles	1.0	1.6587
COLO 678	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.86341
CADOES1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.01391
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41638
OVMANA	CCLE Cell Line Gene Expression Profiles	1.0	1.43186
EP300_SK-N-SH_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me2_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CEBPD_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CDK4_knockdown_133_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.62692
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	2.20115
CEBPB_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
AN3 CA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23992
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.41619
VMRCRCZ	CCLE Cell Line Gene Expression Profiles	1.0	1.84966
MAX	ENCODE Transcription Factor Targets	1.0	null
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.84499
SU-DHL-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4533
H3K79me2_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_K562_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
TCF12	ENCODE Transcription Factor Targets	1.0	null
SP1_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MYBL2	ENCODE Transcription Factor Targets	1.0	null
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.04953
H3K79me2_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927487
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.667145
EZH2	ENCODE Transcription Factor Targets	1.0	null
MAX_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MESSA	CCLE Cell Line Gene Expression Profiles	-1.0	-1.80758
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.91157
CEBPB_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCIH1573	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
SPI1_HL-60_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the vasculature	GWASdb SNP-Phenotype Associations	1.0	0.451497
MYBL2_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07032
CL11	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32718
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41638
H3K9ac_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NR2C2_02_77	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.49033
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.69175
FOXM1_02_37	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.47805
H3K4me1_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
EZH2_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null