association	dataset	threshold value	standardized value
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
abnormality of carbohydrate metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.230564
STAT3_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cognitive disorder	GWASdb SNP-Disease Associations	1.0	0.790203
diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.330753
NCI-H2795	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15931
TE125T	CCLE Cell Line Gene Expression Profiles	1.0	2.36291
SUPHD1	CCLE Cell Line Gene CNV Profiles	1.0	1.54984
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08399
OCI-AML5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.974596
NCIH1155	CCLE Cell Line Gene Expression Profiles	-1.0	-1.60456
cancer	GWASdb SNP-Disease Associations	1.0	0.051246
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.868697
peripheral neuropathy	GWASdb SNP-Phenotype Associations	1.0	0.37772
KURAMOCHI	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
H3K4me2_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
YAP_OE_GDS3220_32_human_MCF10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
NUDUL1	CCLE Cell Line Gene Expression Profiles	1.0	1.3646
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42286
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.927113
abnormality of nervous system physiology	GWASdb SNP-Phenotype Associations	1.0	0.063559
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32574
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01046
acquired metabolic disease	GWASdb SNP-Disease Associations	1.0	0.136309
sensory system disease	GWASdb SNP-Disease Associations	1.0	0.679961
NCIH929	CCLE Cell Line Gene Expression Profiles	1.0	1.49794
HCC4006	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46601
alcohol abuse	GWASdb SNP-Disease Associations	1.0	1.05657
eye disease	GWASdb SNP-Disease Associations	1.0	0.116264
LU99	CCLE Cell Line Gene CNV Profiles	1.0	2.0469
SU-DHL-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06176
H3K4me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
disease of metabolism	GWASdb SNP-Disease Associations	1.0	0.08115
H3K4me3_Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SUPB15	CCLE Cell Line Gene CNV Profiles	1.0	1.39835
HS822T	CCLE Cell Line Gene Expression Profiles	1.0	1.84348
disease	GWASdb SNP-Disease Associations	1.0	0.070034
EP300_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.874143
MALME3M	CCLE Cell Line Gene Expression Profiles	-1.0	-1.64273
L1236	CCLE Cell Line Gene Expression Profiles	1.0	1.82315
EZH2	ENCODE Transcription Factor Targets	1.0	null
neurodegenerative disease	GWASdb SNP-Disease Associations	1.0	0.273809
rheumatoid arthritis	GWASdb SNP-Phenotype Associations	1.0	0.53086
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1062
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827481
EP300	ENCODE Transcription Factor Targets	1.0	null
rheumatoid arthritis	GWASdb SNP-Disease Associations	1.0	0.624931
acute leukemia	GWASdb SNP-Disease Associations	1.0	0.509115
PANC 08.13	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.65536
liver disease	GWASdb SNP-Disease Associations	1.0	1.05657
abnormality of the lung	GWASdb SNP-Phenotype Associations	1.0	0.300633
HCC2935	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45011
786-O	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.920798
acute lymphocytic leukemia	GWASdb SNP-Disease Associations	1.0	0.509115
NCI-H1299	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97886
H3K4ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SLR26	CCLE Cell Line Gene Expression Profiles	-1.0	-2.13154
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.927113
F5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.84033
SKNMC	CCLE Cell Line Gene CNV Profiles	1.0	1.55069
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.08906
bone disease	GWASdb SNP-Disease Associations	1.0	0.122789
HS578T	CCLE Cell Line Gene CNV Profiles	1.0	1.36632
abnormality of the skeletal system	GWASdb SNP-Phenotype Associations	1.0	0.051604
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890908
HOP92	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
arthritis	GWASdb SNP-Disease Associations	1.0	0.266858
NCIN87	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62747
ASPC1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.5791
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08325
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.937511
HCC1162	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
MIA PACA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869364
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841983
EZH2_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SARS-CoV_48Hour_20090954_GSE17400	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.37047
HCC1500	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54299
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19218
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26881
TCCPAN2	CCLE Cell Line Gene Expression Profiles	-1.0	-1.6956
PBX3	ENCODE Transcription Factor Targets	1.0	null
HCC1428	CCLE Cell Line Gene CNV Profiles	1.0	1.446
immunologic hypersensitivity	GWASdb SNP-Phenotype Associations	1.0	0.446935
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.63154
HS 578T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42094
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827481
EFM19	CCLE Cell Line Gene CNV Profiles	-1.0	-1.95002
KG-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.35629
BV173	CCLE Cell Line Gene CNV Profiles	1.0	2.21941
HS863T	CCLE Cell Line Gene Expression Profiles	1.0	2.29044
SNU8	CCLE Cell Line Gene Expression Profiles	1.0	1.79784
abnormality of the cardiovascular system	GWASdb SNP-Phenotype Associations	1.0	0.926083
22RV1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.8126
TCF12	ENCODE Transcription Factor Targets	1.0	null
BHT101	CCLE Cell Line Gene CNV Profiles	1.0	3.09432
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08973
YMB1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12058
JURLMK1	CCLE Cell Line Gene Expression Profiles	1.0	1.68019
PBX3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.286259
HCC2218	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34209
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890908
KE39	CCLE Cell Line Gene CNV Profiles	1.0	1.4994
NCI-H650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04263
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.82633
H3K4me3_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
BT483	CCLE Cell Line Gene CNV Profiles	1.0	1.34159
morphological abnormality of the central nervous system	GWASdb SNP-Phenotype Associations	1.0	0.080235
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.919419
GB1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50236
KP4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02359
Dhori Virus_12Hour_20090954_GSE17400	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-2.35417
bone inflammation disease	GWASdb SNP-Disease Associations	1.0	0.233265
SKMM2	CCLE Cell Line Gene CNV Profiles	1.0	1.65077
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1062
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3629
NCIH727	CCLE Cell Line Gene Expression Profiles	-1.0	-1.58379
H3K4me1_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
OCIMY5	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46614
neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.926083
H3K9me3_Duodenum Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
organ system cancer	GWASdb SNP-Disease Associations	1.0	0.054333
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.496025
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19392
POLR2A	ENCODE Transcription Factor Targets	1.0	null
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934886
BHT-101	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25311
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.974266
HCC364	CCLE Cell Line Gene Expression Profiles	-1.0	-2.10502
PRECLH	CCLE Cell Line Gene Expression Profiles	-1.0	-2.23852
cognitive impairment	GWASdb SNP-Phenotype Associations	1.0	0.686922
disease of mental health	GWASdb SNP-Disease Associations	1.0	0.122027
A-498	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21538
PANC-08-13	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50581
type ii diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.926083
corneal disease	GWASdb SNP-Disease Associations	1.0	0.679961
abnormality of leukocytes	GWASdb SNP-Phenotype Associations	1.0	0.080268
carbohydrate metabolism disease	GWASdb SNP-Disease Associations	1.0	0.243417
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.868697
leukemia	GWASdb SNP-Disease Associations	1.0	0.325953
immune system cancer	GWASdb SNP-Disease Associations	1.0	0.163992
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01868
PATU8988T	CCLE Cell Line Gene Expression Profiles	1.0	1.35172
asthma	GWASdb SNP-Phenotype Associations	1.0	1.61591
ATRFLOX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.885733
TCF12_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
hematologic cancer	GWASdb SNP-Disease Associations	1.0	0.163992
disease of cellular proliferation	GWASdb SNP-Disease Associations	1.0	0.05034
CPCN	CCLE Cell Line Gene CNV Profiles	-1.0	-2.1592
H3K4me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
neoplasm by anatomical site	GWASdb SNP-Phenotype Associations	1.0	0.042773
DU4475	CCLE Cell Line Gene Expression Profiles	1.0	1.69435
leukemia	GWASdb SNP-Phenotype Associations	1.0	0.220334
CHAGOK1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5967
H2AFZ_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH522	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83947
U87MG	CCLE Cell Line Gene Expression Profiles	-1.0	-1.89606
CDK19_knockdown_148_GSE32108	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.54077
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.890908
HS-578-T	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
COLO684	CCLE Cell Line Gene Expression Profiles	-1.0	-1.58871
abnormal peripheral nervous system morphology	GWASdb SNP-Phenotype Associations	1.0	0.37772
PANC0813	CCLE Cell Line Gene CNV Profiles	1.0	1.36065
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934176
MONOMAC1	CCLE Cell Line Gene CNV Profiles	1.0	1.35524
HCC4006	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3464
HS706T	CCLE Cell Line Gene Expression Profiles	1.0	1.40422
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54221
sensory neuropathy	GWASdb SNP-Phenotype Associations	1.0	0.37772
OVCAR5	CCLE Cell Line Gene CNV Profiles	-1.0	-2.48814
UKE-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.977312
KCI-MOH1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0202
abnormality of skeletal morphology	GWASdb SNP-Phenotype Associations	1.0	0.056464
NCI-H2052	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843248
H3K9ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
glucose metabolism disease	GWASdb SNP-Disease Associations	1.0	0.243417
type 2 diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.551374
paresthesia	GWASdb SNP-Phenotype Associations	1.0	0.582578
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of immune system physiology	GWASdb SNP-Phenotype Associations	1.0	0.223941
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.15453
HEV_60Day_None_GSE53731	GEO Signatures of Differentially Expressed Genes for Viral Infections	1.0	1.69266
TM31	CCLE Cell Line Gene CNV Profiles	1.0	2.32514
NCIH1299	CCLE Cell Line Gene CNV Profiles	1.0	1.85443
central nervous system disease	GWASdb SNP-Disease Associations	1.0	0.098139
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841983
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
abnormality of higher mental function	GWASdb SNP-Phenotype Associations	1.0	0.271219
NCI-H1568	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00565
GA10	CCLE Cell Line Gene Expression Profiles	1.0	1.72342
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72392
NCIH1573	CCLE Cell Line Gene Expression Profiles	1.0	1.368
RMUGS	CCLE Cell Line Gene Expression Profiles	1.0	1.56149
CADOES1	CCLE Cell Line Gene CNV Profiles	1.0	1.56176
1321N1	CCLE Cell Line Gene Expression Profiles	1.0	2.61508
JEKO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46601
BFTC909	CCLE Cell Line Gene CNV Profiles	1.0	1.83155
TLX1::NFIC	MotifMap Predicted Transcription Factor Targets	1.0	null
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843248
ME1	CCLE Cell Line Gene Expression Profiles	1.0	2.00775
H3K4me1_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HMC18	CCLE Cell Line Gene Expression Profiles	1.0	1.55315
abnormality of blood and blood-forming tissues	GWASdb SNP-Phenotype Associations	1.0	0.045615
MOLM13	CCLE Cell Line Gene CNV Profiles	1.0	1.66983
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.843248
HCT 116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.884331
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.868697
JHUEM3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42248
H3K79me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GATA3	ENCODE Transcription Factor Targets	1.0	null
NCI-H2126	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42023
BEN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34192
COV318	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46427
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40913
H3K9ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
nervous system disease	GWASdb SNP-Disease Associations	1.0	0.129383
GATA3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JJN-3	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
H3K27ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.15825
SUP-B15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.23073
Dupuytren's disease	GWAS Catalog SNP-Phenotype Associations	1.0	0.750033
lymphoblastic leukemia	GWASdb SNP-Disease Associations	1.0	0.397533
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827481
substance-related disorder	GWASdb SNP-Disease Associations	1.0	0.181411
NCIH1435	CCLE Cell Line Gene CNV Profiles	1.0	1.54814
SNU668	CCLE Cell Line Gene CNV Profiles	1.0	1.35344
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.26597
KYSE-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3273
H3K27ac_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02359
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU283	CCLE Cell Line Gene Expression Profiles	1.0	1.36643
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29221
NCIH660	CCLE Cell Line Gene CNV Profiles	1.0	1.87404
RKO	CCLE Cell Line Gene Expression Profiles	1.0	3.40802
H3K4me2_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
gastrointestinal system disease	GWASdb SNP-Disease Associations	1.0	0.101053
hematological neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.136416
SALE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74434
SF767	CCLE Cell Line Gene Expression Profiles	-1.0	-3.00853
NCIH524	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54478
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3629
abnormality of the respiratory system	GWASdb SNP-Phenotype Associations	1.0	0.255575
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.23167
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97886
HCC2218	CCLE Cell Line Gene CNV Profiles	1.0	1.60407
BV-173	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
CTCF_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
P63_DEPLETION_GDS2534_63_human_ME180 cervical carcinoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
substance abuse	GWASdb SNP-Disease Associations	1.0	0.370568
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
NCIH1755	CCLE Cell Line Gene Expression Profiles	-1.0	-1.84214
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841983
SNU-182	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27956
CCFSTTG1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.92096
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869364
AM38	CCLE Cell Line Gene Expression Profiles	1.0	2.13767
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.841983
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08325
eye and adnexa disease	GWASdb SNP-Disease Associations	1.0	0.116264
abnormality of nervous system morphology	GWASdb SNP-Phenotype Associations	1.0	0.127298
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55189
KG1	CCLE Cell Line Gene CNV Profiles	1.0	2.16088
LEDGF_KD_GDS1580_249_human_293T cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
TNKS_INHIBITION_GDS5029_280_human_SW480 KRAS-mutant colorectal cancer cell line - 4hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
musculoskeletal system disease	GWASdb SNP-Disease Associations	1.0	0.222185
HS888T	CCLE Cell Line Gene Expression Profiles	-1.0	-1.87868
abnormality of the immune system	GWASdb SNP-Phenotype Associations	1.0	0.170488
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.077272
ISTMES2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39561
BRCA1_DEPLETION_GDS2189_121_human_MCF10A mammary epithelial cells (MECs)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97424
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08399
SNU626	CCLE Cell Line Gene Expression Profiles	-1.0	-1.60208
abnormal respiratory system morphology	GWASdb SNP-Phenotype Associations	1.0	0.300633
SC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.884331
abnormal glucose homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.249492
IGR1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65676
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17696
abnormality of cellular immune system	GWASdb SNP-Phenotype Associations	1.0	0.080268
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46529
EFO21	CCLE Cell Line Gene CNV Profiles	-1.0	-1.94048
hepatobiliary disease	GWASdb SNP-Disease Associations	1.0	0.268911
HS940T	CCLE Cell Line Gene Expression Profiles	1.0	2.00649
BV173	CCLE Cell Line Gene Expression Profiles	1.0	1.54835
HCC2157	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
abnormal joint morphology	GWASdb SNP-Phenotype Associations	1.0	0.1713
arthritis	GWASdb SNP-Phenotype Associations	1.0	0.202499
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44559
NCIH1781	CCLE Cell Line Gene Expression Profiles	-1.0	-1.56737
LU-99A	COSMIC Cell Line Gene CNV Profiles	1.0	2.41451
alzheimer's disease	GWASdb SNP-Disease Associations	1.0	0.647016
EFM192A	CCLE Cell Line Gene CNV Profiles	-1.0	-2.40044
JHOS2	CCLE Cell Line Gene Expression Profiles	1.0	1.66847
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.869364
connective tissue disease	GWASdb SNP-Disease Associations	1.0	0.293809
H3K4me2_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
acute leukemia	GWASdb SNP-Phenotype Associations	1.0	0.347722
H3K56ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RKO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11697
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.05
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19218
alzheimer disease	GWASdb SNP-Phenotype Associations	1.0	0.552194
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.089762
CTCF	ENCODE Transcription Factor Targets	1.0	null
NCI-H1944	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.67625
HS742T	CCLE Cell Line Gene Expression Profiles	1.0	1.51788
SCLC21H	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48272
NCI-H2023	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42286
all	GWASdb SNP-Phenotype Associations	1.0	0.06061
D341MED	CCLE Cell Line Gene Expression Profiles	1.0	1.5627
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06106
IM-95	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.974266
abnormality of metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.058423
HEC59	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45544
FOS_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827481
NCIH1581	CCLE Cell Line Gene Expression Profiles	-1.0	-2.60919
acute lymphatic leukemia	GWASdb SNP-Phenotype Associations	1.0	0.434952
H3K9ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.827481
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3629
dementia	GWASdb SNP-Disease Associations	1.0	0.366374
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19218
H3K23ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
lmo4_17452977_mcf7_lof_human_gpl570_gds2789	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.179047
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13036
BXPC3	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50364
abnormality of the endocrine system	GWASdb SNP-Phenotype Associations	1.0	0.104042
NCIH1781	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6092
plantar fascial fibromatosis	GWASdb SNP-Disease Associations	1.0	1.7256
H3K14ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K4me3_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934176
H3K27ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GATA3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM5A	ENCODE Transcription Factor Targets	1.0	null
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54221
NCIH1975	CCLE Cell Line Gene CNV Profiles	1.0	1.62254
PIK3CA_mutant_27_GDS4053	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	1.76472
SNU1076	CCLE Cell Line Gene Expression Profiles	1.0	1.42443
FOS	ENCODE Transcription Factor Targets	1.0	null
HCC2935	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.95826
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
tauopathy	GWASdb SNP-Disease Associations	1.0	0.647016
ZR751	CCLE Cell Line Gene CNV Profiles	-1.0	-1.69787
RS411	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51986
CTF1	MotifMap Predicted Transcription Factor Targets	1.0	null
NCI-H2803	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42023
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.91711
H3K4me3_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.934886
HCC1359	CCLE Cell Line Gene Expression Profiles	-1.0	-1.82099