association	dataset	threshold value	standardized value
MAPK1_knockdown_131_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.43093
FOS_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EFE184	CCLE Cell Line Gene CNV Profiles	1.0	1.33354
TE4	CCLE Cell Line Gene Expression Profiles	-1.0	-2.42607
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40486
Alzheimer's Disease_Entorhinal cortex_GSE5281	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.32124
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833055
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979448
IST-SL1	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
TF1	CCLE Cell Line Gene Expression Profiles	1.0	1.54377
scoliosis	GWASdb SNP-Phenotype Associations	1.0	0.529158
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Stomach Smooth Muscle	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	2.0488
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.77238
KLM1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.95187
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76932
myofascial pain syndrome	GWASdb SNP-Disease Associations	1.0	0.70663
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34967
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37843
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0099
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.913507
disease	GWASdb SNP-Disease Associations	1.0	0.030738
STAT3	ENCODE Transcription Factor Targets	1.0	null
YAPC	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54613
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44942
SK-N-SH	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16997
abnormality of the mandible	GWASdb SNP-Phenotype Associations	1.0	0.60762
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44198
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.992976
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.992976
abnormality of head or neck	GWASdb SNP-Phenotype Associations	1.0	0.093628
SHSY5Y	CCLE Cell Line Gene Expression Profiles	1.0	1.48988
PANC1005	CCLE Cell Line Gene CNV Profiles	1.0	1.60703
AMO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
GSU	CCLE Cell Line Gene Expression Profiles	-1.0	-2.5138
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.032299
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDLM2	CCLE Cell Line Gene Expression Profiles	1.0	3.40796
JHH7	CCLE Cell Line Gene Expression Profiles	1.0	2.18045
bone structure disease	GWASdb SNP-Disease Associations	1.0	0.623051
RMUGS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39698
hypersensitivity reaction type ii disease	GWASdb SNP-Disease Associations	1.0	0.126624
all	GWASdb SNP-Phenotype Associations	1.0	0.032237
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.850671
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26216
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
H1 Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-1.33449
U266B1	CCLE Cell Line Gene CNV Profiles	1.0	1.63642
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00298
CMK115	CCLE Cell Line Gene Expression Profiles	1.0	1.47333
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4659
PCM6	CCLE Cell Line Gene Expression Profiles	1.0	1.45399
abnormality of the skeletal system	GWASdb SNP-Phenotype Associations	1.0	0.08668
L1236	CCLE Cell Line Gene CNV Profiles	1.0	2.15353
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979448
muscular disease	GWASdb SNP-Disease Associations	1.0	0.202075
FOS_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09621
H3K27me3_Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0099
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51747
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861519
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CEBPB_A549_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the curvature of the vertebral column	GWASdb SNP-Phenotype Associations	1.0	0.369141
C32	CCLE Cell Line Gene CNV Profiles	-1.0	-2.10357
BICR16	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58772
ABL1_knockdown_137_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.43449
abnormality of the vertebral column	GWASdb SNP-Phenotype Associations	1.0	0.202054
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0099
KNS42	CCLE Cell Line Gene CNV Profiles	1.0	1.69956
NCI-H1623	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.900086
143B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33174
NCI-H1694	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.96067
BICR22	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77442
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21354
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.038285
HOS	CCLE Cell Line Gene CNV Profiles	-1.0	-2.31844
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29279
estradiol_homo sapiens_gpl570_gds3283	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
OVSAHO	CCLE Cell Line Gene Expression Profiles	-1.0	-1.55467
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26532
HCC1195	CCLE Cell Line Gene CNV Profiles	1.0	1.52702
COLO680N	CCLE Cell Line Gene Expression Profiles	-1.0	-1.85193
CDK7_knockdown_138_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.51382
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04811
MKN45	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59826
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.74288
abnormal axial skeleton morphology	GWASdb SNP-Phenotype Associations	1.0	0.228638
UT7	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73451
ABC1	CCLE Cell Line Gene CNV Profiles	1.0	1.88126
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08519
Skeletal Muscle Male	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	0.84109
A3KAW	CCLE Cell Line Gene Expression Profiles	1.0	1.80173
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11948
HCT8	CCLE Cell Line Gene Expression Profiles	-1.0	-1.87189
abnormality of the head	GWASdb SNP-Phenotype Associations	1.0	0.093628
SNU283	CCLE Cell Line Gene Expression Profiles	-1.0	-1.68637
TEN	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58535
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15494
celiac disease	GWASdb SNP-Disease Associations	1.0	0.60243
abnormality of skeletal morphology	GWASdb SNP-Phenotype Associations	1.0	0.098021
JIMT1	CCLE Cell Line Gene CNV Profiles	1.0	1.45023
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.954713
bone disease	GWASdb SNP-Disease Associations	1.0	0.122434
KURAMOCHI	CCLE Cell Line Gene Expression Profiles	-1.0	-1.84296
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BICR 10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.08037
Endometriosis_Endometrium_GSE7305	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.53309
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8596
RDES	CCLE Cell Line Gene Expression Profiles	1.0	1.38826
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12398
NCIH2052	CCLE Cell Line Gene CNV Profiles	1.0	2.12995
KELLY	CCLE Cell Line Gene Expression Profiles	1.0	1.48126
myopathy	GWASdb SNP-Disease Associations	1.0	0.222554
autoimmune disease of gastrointestinal tract	GWASdb SNP-Disease Associations	1.0	0.60243
HT	CCLE Cell Line Gene Expression Profiles	1.0	2.20176
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.900086
PL45	CCLE Cell Line Gene CNV Profiles	1.0	1.91049
FOS	ENCODE Transcription Factor Targets	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.988253
HBL-100	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8596
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833055
CHEK1_knockdown_136_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.55207
SNU1077	CCLE Cell Line Gene Expression Profiles	-1.0	-1.82953
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
MAP2K1_knockdown_134_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.78798
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.85578
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.861519
NCIH1734	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92996
OMC-1	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.32901
MDAMB415	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34854
Fetal Brain Male	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.09402
EBC1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.14436
NFE2L2	ChEA Transcription Factor Targets	1.0	null
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.900951
GA10	CCLE Cell Line Gene Expression Profiles	1.0	1.84812
H3K27me3_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K27me3_CD4+ CD25- Th Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCIH929	CCLE Cell Line Gene Expression Profiles	1.0	1.6187
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09527
RPMI8402	CCLE Cell Line Gene Expression Profiles	1.0	1.54693
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	1.75476
abnormality of facial skeleton	GWASdb SNP-Phenotype Associations	1.0	0.380354
NCI-H2228	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.87574
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.925462
MHHES1	CCLE Cell Line Gene Expression Profiles	1.0	2.0405
ISTMES1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48132
HT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.05712
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01919
RAJI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0019
H3K27me3_Colonic Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44412
muscle tissue disease	GWASdb SNP-Disease Associations	1.0	0.222554
OCILY10	CCLE Cell Line Gene Expression Profiles	1.0	1.58707
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.900951
EZH2	ENCODE Transcription Factor Targets	1.0	null
NCIH211	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63133
AMO1	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
HT	CCLE Cell Line Gene CNV Profiles	-1.0	-2.24187
HTK	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78858
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.24302
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34967
NCI-H2171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58092
BJAB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.68244
COV413B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70333
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.34967
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03825
HCC38	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55165
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.954713
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1659
NCIH1623	CCLE Cell Line Gene CNV Profiles	1.0	1.80147
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.913507
HCC12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37843
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08519
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.925462
T98G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.900951
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04811
H3K4me3_BE2C_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ES-WA7 Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-0.954078
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37843
143B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48846
HCC60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.833055
T173	CCLE Cell Line Gene Expression Profiles	-1.0	-1.85335
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27222
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
OVMANA	CCLE Cell Line Gene CNV Profiles	1.0	1.40723
HEYA8	CCLE Cell Line Gene Expression Profiles	-1.0	-2.0548
H4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47496
H3K9ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MKN7	CCLE Cell Line Gene CNV Profiles	1.0	1.50999
NFE2L2-22581777-LYMPHOBLASTOID-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.8596
HUCCT1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.49104
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45215
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51592
SNU685	CCLE Cell Line Gene Expression Profiles	-1.0	-2.55094
PF382	CCLE Cell Line Gene Expression Profiles	1.0	1.885
CDK4_knockdown_133_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.89706
abnormality of the skull	GWASdb SNP-Phenotype Associations	1.0	0.334541
KDM5A	ENCODE Transcription Factor Targets	1.0	null
CDK2_knockdown_132_GSE31534	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.53426
UMUC1	CCLE Cell Line Gene Expression Profiles	-1.0	-3.14357
REC1	CCLE Cell Line Gene CNV Profiles	1.0	2.22971
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06533
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.900951
HCC95	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33052
GATA3_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SKNBE2	CCLE Cell Line Gene CNV Profiles	1.0	1.44948
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15494
SBC5	CCLE Cell Line Gene CNV Profiles	1.0	1.42444
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16997
A172	CCLE Cell Line Gene Expression Profiles	-1.0	-1.55906
NCIH1930	CCLE Cell Line Gene Expression Profiles	1.0	1.79241
SNU1214	CCLE Cell Line Gene Expression Profiles	-1.0	-1.69743
SUPHD1	CCLE Cell Line Gene CNV Profiles	1.0	1.48248
HS729	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43138
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.12128
SUDHL6	CCLE Cell Line Gene Expression Profiles	1.0	1.70132
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.852702
H3K4me2_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44412
BC3C	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44284
SH10TC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38938
JHOM2B	CCLE Cell Line Gene Expression Profiles	-1.0	-1.74991
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.954713
NCIH1385	CCLE Cell Line Gene CNV Profiles	1.0	1.32766
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09527
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847528
hypersensitivity reaction disease	GWASdb SNP-Disease Associations	1.0	0.111908
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.979448
CEBPB	ENCODE Transcription Factor Targets	1.0	null
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH2171	CCLE Cell Line Gene CNV Profiles	1.0	1.40462
POLR2A	ENCODE Transcription Factor Targets	1.0	null
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.59282
GR	MotifMap Predicted Transcription Factor Targets	1.0	null
MKN-45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78937
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.925346
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32295
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.900951
WM983B	CCLE Cell Line Gene CNV Profiles	1.0	1.65633
AMO-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.12225
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29184
L540	CCLE Cell Line Gene Expression Profiles	1.0	2.65492
abnormality of the abdomen	GWASdb SNP-Phenotype Associations	1.0	0.511765
GATA3	ENCODE Transcription Factor Targets	1.0	null
EB1	CCLE Cell Line Gene Expression Profiles	1.0	1.38297
SNU601	CCLE Cell Line Gene Expression Profiles	-1.0	-1.51003
ar_21330406_lncap_lof_human_gpl570_gds4113	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.024238
HCC1500	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40903
NCIH1385	CCLE Cell Line Gene Expression Profiles	1.0	2.40871
KMH2	CCLE Cell Line Gene CNV Profiles	1.0	1.69686
CEBPB_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06533
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15494
immune system disease	GWASdb SNP-Disease Associations	1.0	0.049893
musculoskeletal system disease	GWASdb SNP-Disease Associations	1.0	0.127784
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH2228	CCLE Cell Line Gene CNV Profiles	-1.0	-1.86229
KM12	CCLE Cell Line Gene Expression Profiles	1.0	1.7168
C32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.25346
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21261
KATO III	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32295
NCIH1694	CCLE Cell Line Gene CNV Profiles	1.0	2.5999
SF268	CCLE Cell Line Gene CNV Profiles	-1.0	-2.69201
SKNFI	CCLE Cell Line Gene Expression Profiles	1.0	1.52271
H3K27me3_Breast Myoepithelial Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCIH2081	CCLE Cell Line Gene Expression Profiles	1.0	1.52611
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00903
ESR1_KD_GDS4065_452_human_MCF7 estrogen-sensitive breast cancer cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
ME1	CCLE Cell Line Gene CNV Profiles	1.0	1.49175
BXPC3	CCLE Cell Line Gene CNV Profiles	-1.0	-2.6445
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.15494
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12663
CEBPB_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.06205
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51592
KPNRTBM1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.0184
connective tissue disease	GWASdb SNP-Disease Associations	1.0	0.0947
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0099
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1659