association	dataset	threshold value	standardized value
SW 1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56933
GRM	CCLE Cell Line Gene Expression Profiles	1.0	1.78531
AMO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.990206
mania	GWASdb SNP-Phenotype Associations	1.0	0.591439
KPNRTBM1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.02306
FGFR3_knockdown_34_GDS4454	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.73264
RAJI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.926719
MDAMB435S	CCLE Cell Line Gene Expression Profiles	1.0	3.40792
HCC1833	CCLE Cell Line Gene Expression Profiles	-1.0	-2.42344
ARHGDIB_Transfection_GDS4455_551_human_UM-UC-3 bladder carcinoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
paclitaxel_homo sapiens_gpl570_gse39042	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
carbohydrate metabolism disease	GWASdb SNP-Disease Associations	1.0	0.22607
NUGC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.12111
SF268	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.842649
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848105
urinary system disease	GWASdb SNP-Disease Associations	1.0	0.22521
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
HCC12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26126
MAPK14_knockdown_139_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	1.0	2.0575
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27951
CAL148	CCLE Cell Line Gene Expression Profiles	-1.0	-1.57522
HCC2218	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.884419
all	GWASdb SNP-Phenotype Associations	1.0	0.037565
UACC62	CCLE Cell Line Gene Expression Profiles	1.0	2.6549
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0733
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38819
TO175T	CCLE Cell Line Gene Expression Profiles	-1.0	-1.70664
DAN-G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38819
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.848105
LNCAP	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824594
abnormal respiratory system morphology	GWASdb SNP-Phenotype Associations	1.0	0.178333
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.906854
G61	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.842649
cognitive disorder	GWASdb SNP-Disease Associations	1.0	0.11119
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31937
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.84547
diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.266629
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07678
CAPAN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02725
bipolar disorder	GWASdb SNP-Disease Associations	1.0	0.689711
KELLY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51954
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22117
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0103
HT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.17259
CHEK1_knockdown_142_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.18913
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00283
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31752
RPMI7951	CCLE Cell Line Gene Expression Profiles	1.0	1.92132
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31643
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10502
G402	CCLE Cell Line Gene Expression Profiles	1.0	1.39292
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0733
CDK4_knockdown_143_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-2.24637
abnormality of carbohydrate metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.158912
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00283
Psoriasis vulgaris_Skin tissue_GSE14905	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.20384
diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.247634
KMS18	CCLE Cell Line Gene Expression Profiles	1.0	1.67603
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20954
HS611T	CCLE Cell Line Gene Expression Profiles	1.0	1.64778
BJAB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51491
NCI-H1882	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.843619
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.24525
NCIH2141	CCLE Cell Line Gene Expression Profiles	-1.0	-2.42525
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31752
SNU81	CCLE Cell Line Gene Expression Profiles	-1.0	-1.79443
FGFR3_knockdown_173_GSE41035	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.73258
NCI-H2228	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.02527
disease of mental health	GWASdb SNP-Disease Associations	1.0	0.047043
abnormality of the urinary system	GWASdb SNP-Phenotype Associations	1.0	0.940413
kidney disease	GWASdb SNP-Disease Associations	1.0	1.07307
abnormality of the respiratory system	GWASdb SNP-Phenotype Associations	1.0	0.144498
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31937
Bipolar disorder and schizophrenia	GWAS Catalog SNP-Phenotype Associations	1.0	0.104568
JHOM2B	CCLE Cell Line Gene Expression Profiles	-1.0	-1.91347
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07514
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45747
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.96538
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.58179
BICR 22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.22723
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14154
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20954
KU812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.842649
C32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.3433
SK-N-SH	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07678
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.029035
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.927678
NCIH524	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50789
BXPC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.29632
HS729	CCLE Cell Line Gene Expression Profiles	-1.0	-1.99937
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27951
HCC1187	CCLE Cell Line Gene Expression Profiles	-1.0	-2.48537
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07409
bronchopulmonary sequestration	GWASdb SNP-Phenotype Associations	1.0	0.919744
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.4564
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54535
CORL95	CCLE Cell Line Gene Expression Profiles	-1.0	-1.78852
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.943542
KE97	CCLE Cell Line Gene Expression Profiles	1.0	2.00654
disease of metabolism	GWASdb SNP-Disease Associations	1.0	0.074453
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858582
CDK2_knockdown_146_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.30969
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.93169
SKMEL24	CCLE Cell Line Gene Expression Profiles	1.0	2.40861
type ii diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.424807
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.824594
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44309
NCIH1105	CCLE Cell Line Gene Expression Profiles	-1.0	-1.70893
HS 766T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.843619
KG1C	CCLE Cell Line Gene Expression Profiles	1.0	2.09233
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968552
NCIH650	CCLE Cell Line Gene Expression Profiles	1.0	1.44357
MEC2	CCLE Cell Line Gene Expression Profiles	1.0	1.54706
fulvestrant_homo sapiens_gpl570_gse22533	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KMH2	CCLE Cell Line Gene Expression Profiles	1.0	1.4944
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.918815
JIMT-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.90096
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66699
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15634
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26126
ABL1_knockdown_144_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.52739
BICR 10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.884419
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03726
SUM 149PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.843619
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.5234
glucose metabolism disease	GWASdb SNP-Disease Associations	1.0	0.22607
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.043146
SNU503	CCLE Cell Line Gene Expression Profiles	-1.0	-1.934
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.906854
A375	CCLE Cell Line Gene Expression Profiles	1.0	1.3661
CH157MN	CCLE Cell Line Gene Expression Profiles	1.0	2.25283
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.903926
LN18	CCLE Cell Line Gene Expression Profiles	1.0	1.434
Endometriosis_Endometrium_GSE6364	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.64087
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45215
MEC1	CCLE Cell Line Gene Expression Profiles	1.0	1.74438
SNU520	CCLE Cell Line Gene Expression Profiles	-1.0	-1.89568
bipolar affective disorder	GWASdb SNP-Phenotype Associations	1.0	0.591439
depression	GWASdb SNP-Phenotype Associations	1.0	0.378701
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07514
LN382	CCLE Cell Line Gene Expression Profiles	1.0	1.52113
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02725
DKMG	CCLE Cell Line Gene Expression Profiles	1.0	1.49904
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.31757
SKMEL31	CCLE Cell Line Gene Expression Profiles	1.0	1.61106
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20954
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18283
GRANTA519	CCLE Cell Line Gene Expression Profiles	1.0	1.41625
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15912
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0607
disease	GWASdb SNP-Disease Associations	1.0	0.031566
SNU-475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.981531
SU-DHL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15912
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20954
type 2 diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.497336
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.96538
abnormal emotion/affect behavior	GWASdb SNP-Phenotype Associations	1.0	0.294487
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.491594
U-2 OS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.918815
abnormality of the endocrine system	GWASdb SNP-Phenotype Associations	1.0	0.066071
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60942
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38819
Obesity-related traits	GWAS Catalog SNP-Phenotype Associations	1.0	0.220915
T98G	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07514
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.72067
behavioral abnormality	GWASdb SNP-Phenotype Associations	1.0	0.105767
abnormal glucose homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.174708
abnormality of metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.042198
ATR_knockdown_140_GSE31912	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.63825
acquired metabolic disease	GWASdb SNP-Disease Associations	1.0	0.124612
CMK86	CCLE Cell Line Gene Expression Profiles	-1.0	-1.72332
abnormality of the genitourinary system	GWASdb SNP-Phenotype Associations	1.0	0.072195
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.968552
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03958
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.906854
HCC1419	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45834
HCC1419	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2109
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.31937
NCI-H1155	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26126
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.14867
Bronchopulmonary dysplasia	GWAS Catalog SNP-Phenotype Associations	1.0	0.085234
Type 1 diabetes	GWAS Catalog SNP-Phenotype Associations	1.0	0.165905
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14154
mood disorder	GWASdb SNP-Disease Associations	1.0	0.323654
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.64643
U87MG	CCLE Cell Line Gene Expression Profiles	1.0	1.84964
abnormality of nervous system physiology	GWASdb SNP-Phenotype Associations	1.0	0.060449
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19022
JURLMK1	CCLE Cell Line Gene Expression Profiles	1.0	2.02621
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38146
KYSE-520	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07409
REC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32396
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.858582
HCC1937	CCLE Cell Line Gene Expression Profiles	-1.0	-2.42513
NCIH1930	CCLE Cell Line Gene Expression Profiles	-1.0	-1.57605
abnormality of the lung	GWASdb SNP-Phenotype Associations	1.0	0.178333
A101D	CCLE Cell Line Gene Expression Profiles	1.0	1.72339
CAS1	CCLE Cell Line Gene Expression Profiles	1.0	1.56178
