association	dataset	threshold value	standardized value
RNF113A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65834
CDC45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51677
RUVBL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0363
TRAPPC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.20013
ARIH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.58828
496100332_HIP_possible Alzheimer's disease_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.46706
ZNF562	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28605
SHQ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54716
NANOGP8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00988
ZNF19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54565
ADAMTS15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11106
SEBOX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.4483
UBE2T	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20142
RASGRP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0951
SNAPC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.26402
PMC12396377-jcb_202307079_tables1.xlsx-Fig_1C_i_-_iii_left-y_TFEB_KO_LLOMe_VS_WT_LLOMe_DOWN_TFEB	Rummagene Transcription Factor Associations 2026	1.0	null
ERCC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.80505
496100484_FWM_no dementia_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.00476
496100317_FWM_no dementia_no TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-3.37017
NUDT4B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10634
RAB8B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5074
SAMD8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51969
HSF5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25904
CHCHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26489
CRY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.12108
NUS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.81098
496100342_PCx_no dementia_no TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-3.43996
PLEKHA4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.12145
EXOSC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78429
RNF25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.52634
RPL27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02867
TP53RK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03689
EIF3M	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59434
DDX39B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06456
GNE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.91939
FTH1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48954
TRUB1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6
TRPM7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.79988
TMEM44	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59242
SLC8B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.00041
NOL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	6.30383
BET1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.62185
STMN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12384
496100459_PCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-3.03133
METTL24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.52162
DDX52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.26195
TOPBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45249
CCNK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.74991
SACM1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15189
REM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.14913
MASTL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43213
XRN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.65371
ATP2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23321
496100488_TCx_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-3.14621
MYDGF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30871
PRX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.65048
METTL21EP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1007
PPP1R2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.78243
EIF4A3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.08506
EBF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.8938
AARD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.31324
FAM111B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34144
IL17RE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.38285
USP19	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47538
SYMPK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.75388
SPACA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18992
N6AMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.45507
NAA40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.16828
WAPL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.83765
RTN4R	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07324
RPA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.16936
CCDC174	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.7632
C21orf91	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82883
ERCC8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.23547
ENTPD6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.68272
NUP205	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00634
ICAM5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28791
TMUB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.76253
MYC	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12822
CSNK1A1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3481
TEDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20743
PGM2L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11616
SNRPD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07959
SUGP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.05461
NAGA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.17035
FAM169A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.18502
POLR2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04244
DPH6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.12579
EIF2B1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02647
MBD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.26804
TNNC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.41316
SEMA5B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.32533
CKB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.08068
CHRAC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.3421
NIPBL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66758
LINS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51901
DDX47	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.02299
BCAS2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27404
MARCHF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45002
PCF11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1591
POMGNT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18279
PDIA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.12439
PSMD7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57071
CEP76	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.04108
ZBTB38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.11369
KDM4C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.55219
PSENEN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03421
TMEM218	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.00245
MED21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.1102
BPNT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47652
AXIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30095
496100341_TCx_no dementia_no TBI_81_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-3.47126
LSM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46751
THAP5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46511
PBX2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06662
ZNF821	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25311
RAD51C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20577
AAMP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30663
DCUN1D3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-5.54025
GPR50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73701
VPS16	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.04699
TAOK1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.5997
NUP210	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06454
CYB5D1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.11789
BMPR1A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.39866
496100608_FWM_no dementia_no TBI_78_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.24682
CPSF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.92679
FAM133B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50282
AATF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.42993
ZGLP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86698
OTULINL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.77083
MAPKAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60952
SMIM15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09916
NUMBL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.235
IREB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.71271
PPP1R9B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30023
BCLAF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25594
496100464_FWM_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-3.4389
TCFL5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0727
SF3A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.47493
CTNNBL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10245
WHAMM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51827
H2BC13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.1479
ARL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.55874
EIF3A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5059
RAE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.41205
AURKA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.4628
ERAP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14922
ZNF133	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23018
POMP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.39555
ECT2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3968
IFI35	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.34451
NHLRC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15938
EIF1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20089
PDCD11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.36824
FAM78A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.2834
MTG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.04251
SPPL2B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.26039
CRIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21057
NEPRO	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1491
NFE4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00525
EIF2B4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.69131
SGO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.61303
ZSCAN4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47049
R3HDM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54425
PIEZO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30345
USE1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.74597
MYO9B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.15074
VDR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.27985
C12orf43	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.17408
NR2C2AP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.19271
ZNF396	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73538
GAREM2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0253
PHF20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.6439
CARF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47477
VCP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.5716
DAG1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06557
SLC22A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73408
TGIF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.66819
496100562_FWM_no dementia_TBI_95-99_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	1.0	2.30236
SMIM3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65404
TFPT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13434
MOV10	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.14221
RIPPLY1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.21905
PCGF3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.90308
PPP1R11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48141
496100471_HIP_no dementia_no TBI_89_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-3.34416
TRIM33	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.74184
VPS45	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.55859
KDR	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.75817
CASKIN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.17033
496100343_TCx_possible Alzheimer's disease_no TBI_86_F	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.78523
KLC4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.62761
496100467_FWM_probable Alzheimer's disease_no TBI_89_M	Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles	-1.0	-2.00266
PRSS50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07592
SLC27A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.77953
APEX1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.9232
TULP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.95225
DROSHA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.03555
TUBGCP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06842
LRFN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.61568