association	dataset	threshold value	standardized value
SKNAS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44598
LN-18	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.06062
endometrial carcinoma	GWASdb SNP-Phenotype Associations	1.0	0.770746
MDAMB157	CCLE Cell Line Gene Expression Profiles	-1.0	-2.39938
H3K27me3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JHESOAD1	CCLE Cell Line Gene CNV Profiles	1.0	1.4507
EFO27	CCLE Cell Line Gene Expression Profiles	-1.0	-2.49625
lymphoma	GWASdb SNP-Disease Associations	1.0	0.308894
H3K27me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9ac_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37114
YY1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
TBP	ENCODE Transcription Factor Targets	1.0	null
H3K27me3_Peripheral Blood Mononuclear Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
hematological neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.185609
H3K27me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
female reproductive organ cancer	GWASdb SNP-Disease Associations	1.0	0.348477
abnormality of nervous system physiology	GWASdb SNP-Phenotype Associations	1.0	0.063102
H3K27me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01373
HCC1954	CCLE Cell Line Gene CNV Profiles	1.0	1.38312
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09272
disease	GWASdb SNP-Disease Associations	1.0	0.069643
SKBR3	CCLE Cell Line Gene Expression Profiles	1.0	1.41684
TBP_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OVCAR433	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00859
MXI1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PLB985	CCLE Cell Line Gene CNV Profiles	-1.0	-1.87295
neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.198353
neurodegenerative disease	GWASdb SNP-Disease Associations	1.0	0.294095
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02697
CHD2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTBP2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RERFLCSQ1	CCLE Cell Line Gene CNV Profiles	1.0	1.75468
breast carcinoma	GWASdb SNP-Phenotype Associations	1.0	0.770746
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BC3C	CCLE Cell Line Gene CNV Profiles	1.0	1.46515
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CAPAN1	CCLE Cell Line Gene CNV Profiles	1.0	1.84424
CTCF	ENCODE Transcription Factor Targets	1.0	null
RS411	CCLE Cell Line Gene Expression Profiles	1.0	1.75069
SKNMC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39542
Idiopathic fibrosing alveolitis_Lung Tissue_GSE21369	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-3.23441
POLR2A_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
genital neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.281787
H3K27me3_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SNU869	CCLE Cell Line Gene CNV Profiles	-1.0	-2.12988
NCI-H292	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37114
renal cell carcinoma	GWASdb SNP-Disease Associations	1.0	0.877977
H3K27me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Polycystic Ovary Syndrome_Skeletal muscle_GSE6798	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.57323
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04142
KU1919	CCLE Cell Line Gene Expression Profiles	1.0	1.52373
uterine neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.395332
endometrial carcinoma	GWASdb SNP-Disease Associations	1.0	0.877977
neuroepithelial neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.315287
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	1.15352
SNU8	CCLE Cell Line Gene Expression Profiles	1.0	1.48587
Rectal Mucosa Donor 31	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.38953
SKMM2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.52226
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.905343
CHD2	ENCODE Transcription Factor Targets	1.0	null
H3K27me3_mononuclear cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neoplasm of the lung	GWASdb SNP-Phenotype Associations	1.0	0.770746
TEAD4_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.878425
neoplasm of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.281787
H3K4me3_NT2-D1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00859
MEK_INHIBITION_GDS5029_278_human_SW480 KRAS-mutant colorectal cancer cell line - 4hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
SKCO1	CCLE Cell Line Gene Expression Profiles	1.0	1.49069
Ebolavirus(ZEBOV)_3day_PBMCs_rNAPc2treated_21987740_GSE24943	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-0.547657
KMS26	CCLE Cell Line Gene CNV Profiles	1.0	1.6904
HUT102	CCLE Cell Line Gene Expression Profiles	1.0	2.14214
BACH1	ENCODE Transcription Factor Targets	1.0	null
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877582
DM3	CCLE Cell Line Gene Expression Profiles	-1.0	-1.89051
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.82722
all	GWASdb SNP-Phenotype Associations	1.0	0.05613
POLR2AphosphoS5_neural cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60154
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02881
RAD21_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_fibroblast of lung_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
CTBP2	ENCODE Transcription Factor Targets	1.0	null
Skeletal Muscle Male	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-0.897539
H3K4me3_fibroblast of gingiva_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_fibroblast of gingiva_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
NUDUL1	CCLE Cell Line Gene Expression Profiles	1.0	1.51445
EZH2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IMR-32	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.01728
neoplasm of the central nervous system	GWASdb SNP-Phenotype Associations	1.0	0.281787
A704	CCLE Cell Line Gene Expression Profiles	-1.0	-1.54145
BT20	CCLE Cell Line Gene CNV Profiles	1.0	1.87038
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11408
TEAD4	ENCODE Transcription Factor Targets	1.0	null
increased body weight	GWASdb SNP-Phenotype Associations	1.0	1.0674
UM-UC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40147
CHP212	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60905
mantle cell lymphoma	GWASdb SNP-Disease Associations	1.0	0.877977
SNU738	CCLE Cell Line Gene CNV Profiles	1.0	1.5065
H3K4me2_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
A3/KAW	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37114
abnormality of nervous system morphology	GWASdb SNP-Phenotype Associations	1.0	0.082145
ACHN	CCLE Cell Line Gene CNV Profiles	1.0	1.43054
EBC1	CCLE Cell Line Gene CNV Profiles	1.0	1.80352
JIMT1	CCLE Cell Line Gene CNV Profiles	1.0	1.38661
H3K27me3_kidney epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neoplasm by histology	GWASdb SNP-Phenotype Associations	1.0	0.213481
CHP-212	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71597
BHY	CCLE Cell Line Gene CNV Profiles	-1.0	-2.30635
CHD7	ENCODE Transcription Factor Targets	1.0	null
b-cell lymphoma	GWASdb SNP-Disease Associations	1.0	0.462611
TCF12_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_fibroblast of lung_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_cardiac mesoderm_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18493
TCF12	ENCODE Transcription Factor Targets	1.0	null
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6524
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.56129
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.964544
ALAS2_OE_GDS2118_74_human_Blood	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61817
glioblastoma	GWASdb SNP-Phenotype Associations	1.0	0.770746
malignant neoplasm of the central nervous system	GWASdb SNP-Phenotype Associations	1.0	0.315287
H3K36me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the astrocytes	GWASdb SNP-Phenotype Associations	1.0	0.770746
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.056516
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27873
H3K27me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
obesity	GWASdb SNP-Phenotype Associations	1.0	1.0674
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-N-AS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71763
S117	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74374
MAX	ENCODE Transcription Factor Targets	1.0	null
H3K27me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_fibroblast of villous mesenchyme_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RAD21_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of extrapyramidal motor function	GWASdb SNP-Phenotype Associations	1.0	0.67336
CHD7_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BACH1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61817
NCIH28	CCLE Cell Line Gene Expression Profiles	1.0	2.19545
RAD21	ENCODE Transcription Factor Targets	1.0	null
non-hodgkin lymphoma	GWASdb SNP-Disease Associations	1.0	0.3994
NCIH2291	CCLE Cell Line Gene Expression Profiles	1.0	1.34969
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of central motor function	GWASdb SNP-Phenotype Associations	1.0	0.67336
MDAMB361	CCLE Cell Line Gene CNV Profiles	1.0	1.81813
renal cell carcinoma	GWASdb SNP-Phenotype Associations	1.0	0.770746
ATRFLOX	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47804
H3K27ac_iPS DF 19.11	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00859
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37114
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.11478
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5337
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.79703
CTCF_brain microvascular endothelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1428	CCLE Cell Line Gene CNV Profiles	1.0	1.77145
nervous system disease	GWASdb SNP-Disease Associations	1.0	0.055108
PRECLH	CCLE Cell Line Gene Expression Profiles	1.0	2.60765
abnormal internal genitalia	GWASdb SNP-Phenotype Associations	1.0	0.17372
COLO 792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.48556
E2F6_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
morphological abnormality of the central nervous system	GWASdb SNP-Phenotype Associations	1.0	0.093228
hematologic cancer	GWASdb SNP-Disease Associations	1.0	0.132592
glioma	GWASdb SNP-Phenotype Associations	1.0	0.349025
NCIH196	CCLE Cell Line Gene Expression Profiles	-1.0	-2.68045
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903167
abnormality of blood and blood-forming tissues	GWASdb SNP-Phenotype Associations	1.0	0.058337
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12741
NCI-H510A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82466
obesity	GWASdb SNP-Disease Associations	1.0	1.21996
H3K27me3_endothelial cell of umbilical vein_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.18662
SP4	ENCODE Transcription Factor Targets	1.0	null
KON	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
EZH2	ENCODE Transcription Factor Targets	1.0	null
substance dependence	GWASdb SNP-Disease Associations	1.0	0.347621
disease of anatomical entity	GWASdb SNP-Disease Associations	1.0	0.027468
HS870T	CCLE Cell Line Gene Expression Profiles	1.0	1.54424
PFEIFFER	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20244
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13323
H3K27me3_fibroblast of lung_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the respiratory system	GWASdb SNP-Phenotype Associations	1.0	0.130672
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.32431
H3K4me3_H7_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MG63	CCLE Cell Line Gene CNV Profiles	1.0	3.2803
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12741
GDM1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81225
urinary tract neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.315287
H3K27me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of female internal genitalia	GWASdb SNP-Phenotype Associations	1.0	0.185609
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.913042
SP1	ENCODE Transcription Factor Targets	1.0	null
ZXDC1_KD_GSE45417_686_human_U937	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
H3K27me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
astrocytoma	GWASdb SNP-Disease Associations	1.0	0.462611
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28129
abnormality of the breast	GWASdb SNP-Phenotype Associations	1.0	0.395332
abnormality of the genital system	GWASdb SNP-Phenotype Associations	1.0	0.109235
malignant glioma	GWASdb SNP-Disease Associations	1.0	0.462611
Ebolavirus(ZEBOV)_6day_PBMCs_rNAPc2treated_21987740_GSE24943	GEO Signatures of Differentially Expressed Genes for Viral Infections	-1.0	-0.409616
H3K4me3_cardiac mesoderm_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
HDAC2	ENCODE Transcription Factor Targets	1.0	null
SNU324	CCLE Cell Line Gene CNV Profiles	-1.0	-1.92941
POLR2AphosphoS5_neural cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
uterine cancer	GWASdb SNP-Disease Associations	1.0	0.462611
KU1919	CCLE Cell Line Gene CNV Profiles	1.0	1.38312
EGR1	ENCODE Transcription Factor Targets	1.0	null
reproductive organ cancer	GWASdb SNP-Disease Associations	1.0	0.244848
synucleinopathy	GWASdb SNP-Disease Associations	1.0	0.776026
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.76757
growth abnormality	GWASdb SNP-Phenotype Associations	1.0	0.321238
nicotine dependence	GWASdb SNP-Disease Associations	1.0	1.31635
HS255T	CCLE Cell Line Gene Expression Profiles	1.0	1.6019
HDAC2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82466
neoplasm by anatomical site	GWASdb SNP-Phenotype Associations	1.0	0.206027
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82466
CHD1	ENCODE Transcription Factor Targets	1.0	null
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04965
abnormality of the genitourinary system	GWASdb SNP-Phenotype Associations	1.0	0.114414
H3K4me3_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_CD14-positive monocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CALU3	CCLE Cell Line Gene Expression Profiles	-1.0	-1.53625
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.958352
H3K4me1_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
FOS_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NB1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40638
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0404
TC32	CCLE Cell Line Gene Expression Profiles	1.0	1.75405
GSS	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
CHD1_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the glial cells	GWASdb SNP-Phenotype Associations	1.0	0.349025
MXI1	ENCODE Transcription Factor Targets	1.0	null
abnormality of the endometrium	GWASdb SNP-Phenotype Associations	1.0	0.770746
OVCA 432	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.878425
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.913042
YY1_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EGR1_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nutrition disease	GWASdb SNP-Disease Associations	1.0	0.442803
GA-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60586
COLO 829	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05519
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
endometrial cancer	GWASdb SNP-Disease Associations	1.0	0.462611
MDA-MB-361	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
SP1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JHOS4	CCLE Cell Line Gene CNV Profiles	1.0	1.70417
abnormal respiratory system morphology	GWASdb SNP-Phenotype Associations	1.0	0.16323
LN-18	COSMIC Cell Line Gene CNV Profiles	1.0	2.93899
KDM4A	ENCODE Transcription Factor Targets	1.0	null
ST486	CCLE Cell Line Gene Expression Profiles	1.0	3.40795
HS742T	CCLE Cell Line Gene Expression Profiles	-1.0	-1.6858
H3K27me3_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H209	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37114
neoplasm of the respiratory system	GWASdb SNP-Phenotype Associations	1.0	0.315287
cancer	GWASdb SNP-Disease Associations	1.0	0.204497
astrocytoma	GWASdb SNP-Phenotype Associations	1.0	0.770746
parkinson's disease	GWASdb SNP-Disease Associations	1.0	0.776026
MAX_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MCF-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05064
H3K27me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TGBC11TKB	CCLE Cell Line Gene CNV Profiles	1.0	1.3315
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976304
CAL148	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76931
POLR2AphosphoS2_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ST486	CCLE Cell Line Gene CNV Profiles	1.0	2.07509
parkinsonism	GWASdb SNP-Phenotype Associations	1.0	0.67336
cell type cancer	GWASdb SNP-Disease Associations	1.0	0.308894
GA10	CCLE Cell Line Gene CNV Profiles	1.0	2.12964
H3K9ac_Stomach Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
G122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05592
HCC2218	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59221
H3K4me3_cardiac mesoderm_hg19_6	ENCODE Histone Modification Site Profiles	1.0	null
ALK_KD_GDS2724_105_human_DAOY medulloblastoma cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
RT11284	CCLE Cell Line Gene Expression Profiles	1.0	1.65762
SP4_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
YY1	ENCODE Transcription Factor Targets	1.0	null
H3K27me3_kidney epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SAP30	ENCODE Transcription Factor Targets	1.0	null
abnormality of the upper urinary tract	GWASdb SNP-Phenotype Associations	1.0	0.145867
H3K27me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GABPA	ENCODE Transcription Factor Targets	1.0	null
OVMANA	CCLE Cell Line Gene CNV Profiles	-1.0	-1.46095
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1134
RERF-LC-OK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00859
SUZ12	ENCODE Transcription Factor Targets	1.0	null
MDAMB157	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57919
NANOG_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
immune system cancer	GWASdb SNP-Disease Associations	1.0	0.132592
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.53495
CAL851	CCLE Cell Line Gene Expression Profiles	1.0	1.36689
RERF-LC-KJ	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.878425
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.913042
EGR1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormality of the uterus	GWASdb SNP-Phenotype Associations	1.0	0.349025
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901142
H3K4me3_cardiac mesoderm_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MAX_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
DU4475	CCLE Cell Line Gene Expression Profiles	1.0	1.93864
PK-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05064
MHHES1	CCLE Cell Line Gene Expression Profiles	-1.0	-2.07458
thoracic cancer	GWASdb SNP-Disease Associations	1.0	0.462611
substance-related disorder	GWASdb SNP-Disease Associations	1.0	0.220865
H3K9me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82466
abnormality of the urinary system	GWASdb SNP-Phenotype Associations	1.0	0.11921
glioblastoma multiforme	GWASdb SNP-Disease Associations	1.0	0.877977
SUZ12_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
renal neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.395332
NCIH322	CCLE Cell Line Gene CNV Profiles	1.0	1.48017
breast cancer	GWASdb SNP-Disease Associations	1.0	0.877977
ZNF143	ENCODE Transcription Factor Targets	1.0	null
CHD1_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
SIN3A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
E2F6	ENCODE Transcription Factor Targets	1.0	null
NANOG	ENCODE Transcription Factor Targets	1.0	null
H3K27me3_BJ_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GABPA_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disease of mental health	GWASdb SNP-Disease Associations	1.0	0.068967
Primary T cells from cord blood	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.12351
SOX11_DEPLETION_GDS4801_326_human_Z138 mantle cell lymphoma (MCL) cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
HCA-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66633
SIN3A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KDM4A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SUZ12_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
renal carcinoma	GWASdb SNP-Disease Associations	1.0	0.877977
SIN3A	ENCODE Transcription Factor Targets	1.0	null
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.928934
nervous tissue neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.315287
786O	CCLE Cell Line Gene Expression Profiles	1.0	2.10165
SK-MEL-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.58923
SALE	CCLE Cell Line Gene Expression Profiles	1.0	1.72061
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.52124
H3K4me3_cardiac mesoderm_hg19_5	ENCODE Histone Modification Site Profiles	1.0	null
disease of cellular proliferation	GWASdb SNP-Disease Associations	1.0	0.200281
MDAMB134VI	CCLE Cell Line Gene CNV Profiles	-1.0	-1.94994
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00859
neoplasm of the genitourinary tract	GWASdb SNP-Phenotype Associations	1.0	0.298202
KMS-26	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.52426
SIHA	CCLE Cell Line Gene CNV Profiles	1.0	2.35015
SUZ12_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1897	CCLE Cell Line Gene Expression Profiles	1.0	1.72378
RT112	CCLE Cell Line Gene Expression Profiles	-1.0	-1.45158
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.878425
H3K27ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
urinary system cancer	GWASdb SNP-Disease Associations	1.0	0.348477
OELE	CCLE Cell Line Gene Expression Profiles	1.0	1.82362
RAD21_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
VCAP	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
H3K4me3_fibroblast of lung_hg19_7	ENCODE Histone Modification Site Profiles	1.0	null
HSC3	CCLE Cell Line Gene Expression Profiles	1.0	1.38845
abnormality of the female genitalia	GWASdb SNP-Phenotype Associations	1.0	0.185609
H4K20me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_H1 BMP4 Derived Mesendoderm Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RBBP5	ENCODE Transcription Factor Targets	1.0	null
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.905191
HCT 116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.47618
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32526
respiratory system cancer	GWASdb SNP-Disease Associations	1.0	0.462231
H3K4me3_H7_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
HDAC2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KPL1	CCLE Cell Line Gene CNV Profiles	1.0	1.37647
H3K4me3_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.225
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37499
EOL1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.79118
lymphoma	GWASdb SNP-Phenotype Associations	1.0	0.770746
abnormality of body weight	GWASdb SNP-Phenotype Associations	1.0	0.379688
Obesity-related traits	GWAS Catalog SNP-Phenotype Associations	1.0	0.246511
ZXDC_KD_GDS5070_504_human_U937	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
kidney cancer	GWASdb SNP-Disease Associations	1.0	0.462611
disease of metabolism	GWASdb SNP-Disease Associations	1.0	0.138535
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.29979
MDA-MB-330	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00859
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.965554
ME1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70094
abnormal genital system morphology	GWASdb SNP-Phenotype Associations	1.0	0.124566
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18872
SK-CO-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.37457
SW900	CCLE Cell Line Gene Expression Profiles	1.0	2.29819
H4K8ac_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3054
KYO1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44433
E2F4_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organ system cancer	GWASdb SNP-Disease Associations	1.0	0.19731
neoplasm of the breast	GWASdb SNP-Phenotype Associations	1.0	0.770746
SNU503	CCLE Cell Line Gene CNV Profiles	1.0	1.48474
abnormality of the kidney	GWASdb SNP-Phenotype Associations	1.0	0.145867
BV173	CCLE Cell Line Gene Expression Profiles	-1.0	-2.36904
OCILY19	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50949
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12741
MG-63	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.14362
SIRT6	ENCODE Transcription Factor Targets	1.0	null
D283MED	CCLE Cell Line Gene CNV Profiles	-1.0	-1.44894
LUDLU1	CCLE Cell Line Gene Expression Profiles	-1.0	-1.93909
PHF8	ENCODE Transcription Factor Targets	1.0	null
H3K4me1_H1 BMP4 Derived Mesendoderm Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.45353
ZR7530	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36415
BHY	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.07059
MM1S	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34767
overnutrition	GWASdb SNP-Disease Associations	1.0	0.506842
H3K9ac_NT2-D1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H4K20me1_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K4me1_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
IMR32	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82766
central nervous system disease	GWASdb SNP-Disease Associations	1.0	0.106892
FOS	ENCODE Transcription Factor Targets	1.0	null
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02881
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.885454
H3K4me3_cardiac mesoderm_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
abnormality of the lung	GWASdb SNP-Phenotype Associations	1.0	0.16323
NCIH2030	CCLE Cell Line Gene CNV Profiles	1.0	1.47846
E2F4	ENCODE Transcription Factor Targets	1.0	null
E2F6_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OUMS-23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.82466
JUND_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SIRT6_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lung carcinoma	GWASdb SNP-Disease Associations	1.0	0.3994
H3K9me3_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.976304
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6524
HS606T	CCLE Cell Line Gene Expression Profiles	-1.0	-2.52198
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61817
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.964544
H3K4me2_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
lung cancer	GWASdb SNP-Disease Associations	1.0	1.31635
ZNF143_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HL-60	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.66633
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acquired metabolic disease	GWASdb SNP-Disease Associations	1.0	0.214169
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877582
H3K27me3_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neuroectodermal neoplasm	GWASdb SNP-Phenotype Associations	1.0	0.315287
H3K4me3_fibroblast of lung_hg19_6	ENCODE Histone Modification Site Profiles	1.0	null
HCC70	CCLE Cell Line Gene CNV Profiles	1.0	1.3811
H3K4me3_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
LN18	CCLE Cell Line Gene CNV Profiles	1.0	2.58482
PHF8_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877582
non-small cell lung carcinoma	GWASdb SNP-Disease Associations	1.0	0.877977
POLR2AphosphoS2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null