association	dataset	threshold value	standardized value
NCIH1651	CCLE Cell Line Gene CNV Profiles	1.0	2.69672
H3K27me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KYSE-180	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.11374
NCI-H727	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.05143
EVSAT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65798
NCI-H1623	COSMIC Cell Line Gene CNV Profiles	1.0	3.12177
CCRT CEM	BioGPS Cell Line Gene Expression Profiles	1.0	2.41625
LS1034	CCLE Cell Line Gene Expression Profiles	-1.0	-2.53453
SLR21	CCLE Cell Line Gene Expression Profiles	-1.0	-3.65416
MDA-MB-231	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.988007
NCIH1623	CCLE Cell Line Gene CNV Profiles	1.0	1.63898
KYSE-450	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.931464
esr1_21299862_mcf7_lof_human_gpl570_gds4065	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	1.0	0.172389
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.878105
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	3.19301
HCC2279	CCLE Cell Line Gene CNV Profiles	1.0	1.33134
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.04281
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.865427
A172	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.48897
H2AFZ_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TT	CCLE Cell Line Gene CNV Profiles	1.0	1.81949
RERFLCAD2	CCLE Cell Line Gene Expression Profiles	1.0	1.50658
A-427	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01315
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.93356
HS940T	CCLE Cell Line Gene Expression Profiles	1.0	1.44214
capsaicin-4612	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
thioguanosine-6643	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
PPARD	ChEA Transcription Factor Targets	1.0	null
PK-45H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.877566
G142	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36582
DU 145	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.838164
H3K27me3_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Fetallung	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.66689
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02187
Thymus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.20675
NCIH1395	CCLE Cell Line Gene CNV Profiles	1.0	1.34453
SH10TC	CCLE Cell Line Gene Expression Profiles	1.0	1.93404
JHOS4	CCLE Cell Line Gene CNV Profiles	1.0	1.86871
SAP30_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20027
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.999949
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3459
KU1919	CCLE Cell Line Gene CNV Profiles	1.0	1.69045
NCI-H1650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910095
RARA_01_51	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.09686
YY1	MotifMap Predicted Transcription Factor Targets	1.0	null
PAX2_01_72	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.62312
ACHN	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.43323
NAMALWA	CCLE Cell Line Gene Expression Profiles	1.0	1.58724
TrigeminalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.05785
NCIH650	CCLE Cell Line Gene CNV Profiles	1.0	1.51889
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55002
SCC4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65259
SNU503	CCLE Cell Line Gene CNV Profiles	1.0	1.62548
OKAJIMA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13148
ESR1_KD_GDS4065_452_human_MCF7 estrogen-sensitive breast cancer cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41535
FOS_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.89063
MAZ	ENCODE Transcription Factor Targets	1.0	null
Wholebrain	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.27711
HCC827	CCLE Cell Line Gene Expression Profiles	1.0	1.53779
MSX1_01_281	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.6026
HCC2157	CCLE Cell Line Gene CNV Profiles	1.0	1.34894
RUNX2-22187159-PCA-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
alpha-ergocryptine-4552	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
sorafenib_homo sapiens_gpl6244_gse35907	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942803
HT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.77619
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.999949
HT	CCLE Cell Line Gene CNV Profiles	-1.0	-3.20861
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864339
indoprofen-3007	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCIH446	CCLE Cell Line Gene Expression Profiles	-1.0	-1.9127
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
Asthma, allergic_Bronchial epithelium_GSE3004	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-2.68296
KARPAS620	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32817
sulconazole-6652	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BT-549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.64512
CardiacMyocytes	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.40794
TestisGermCell	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.60632
J82	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57928
MDAMB415	CCLE Cell Line Gene CNV Profiles	-1.0	-1.91577
OELE	CCLE Cell Line Gene Expression Profiles	-1.0	-2.50362
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70063
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19368
HS751T	CCLE Cell Line Gene Expression Profiles	1.0	1.52497
SF767	CCLE Cell Line Gene Expression Profiles	-1.0	-1.65509
DMS 454	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13247
SNU738	CCLE Cell Line Gene CNV Profiles	1.0	2.07775
MKN-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41535
NCIH23	CCLE Cell Line Gene CNV Profiles	1.0	1.32789
FOS_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SAP30	ENCODE Transcription Factor Targets	1.0	null
KARPAS-620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25824
LN18	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.30407
(+/-)-catechin-3012	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13247
NCIH1563	CCLE Cell Line Gene Expression Profiles	1.0	2.19012
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.932468
GM97	BioGPS Cell Line Gene Expression Profiles	1.0	1.67882
AtrioventricularNode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.40922
RhoGDIbeta_KD_GDS2864_634_human_MDA-MB-231 breast cancer cells	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
G130	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.988007
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.3459
H3K9me3_CD4+ CD25- IL17+ PMA-Ionomcyin stimulated Th17 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
OlfactoryBulb	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.836562
OCIM1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09608
COLO792	CCLE Cell Line Gene Expression Profiles	1.0	2.2011
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10027
HCC1143	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.16811
KMM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41535
SCABER	CCLE Cell Line Gene CNV Profiles	1.0	1.35776
KALS1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54184
UterusCorpus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.870412
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.19729
ZR75_1	BioGPS Cell Line Gene Expression Profiles	1.0	1.38759
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.839025
EDD_DEPLETION_GDS2445_116_human_embryonic fibroblasts	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
SKM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3392
BMI-1_DEPLETION_GDS2445_115_human_embryonic fibroblasts	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.999949
HS819T	CCLE Cell Line Gene Expression Profiles	1.0	2.09634
BRAF_druginhibition_175_GSE42872	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.81942
NCIH2052	CCLE Cell Line Gene CNV Profiles	1.0	2.18262
EBC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55207
MAZ_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
U-698-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38231
KYSE180	CCLE Cell Line Gene CNV Profiles	1.0	1.35933
MHHNB11	CCLE Cell Line Gene Expression Profiles	1.0	1.63645
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2867
Leukemialymphoblastic(MOLT-4)	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.12357
HCC1500	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6774
EZH2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IGF1_OE_GDS3484_538_human_MCF-7	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
LN340	CCLE Cell Line Gene Expression Profiles	-1.0	-1.59647
4-hydroxyphenazone-4095	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
H3K4me1_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SUZ12_DEPLETION_GDS2445_119_human_embryonic fibroblasts	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55211
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55002
HCC1171	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14231
Lymphnode	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.876709
NCIH69	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83296
CAL78	CCLE Cell Line Gene CNV Profiles	1.0	1.55085
G292CLONEA141B1	CCLE Cell Line Gene CNV Profiles	1.0	2.828
ETS1_01_244	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.62066
MDST8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.54731
H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07293
diflunisal-4210	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
BRAF_druginhibition_38_GDS5085	GEO Signatures of Differentially Expressed Genes for Kinase Perturbations	-1.0	-1.81942
phenoxybenzamine-4652	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
HEC50B	CCLE Cell Line Gene Expression Profiles	1.0	1.44788
EWSR1_KD_GDS4962_465_human_Ewing sarcoma and prostate cancer	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.41535
SF539	BioGPS Cell Line Gene Expression Profiles	-1.0	-1.0542
NCIH1650	CCLE Cell Line Gene CNV Profiles	1.0	1.45975
DND41	CCLE Cell Line Gene Expression Profiles	-1.0	-1.93741
HEP G2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15293
H3K27me3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Crohn's disease_Intestine - Large Intestine - Colon (MMHCC)_GSE6731	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.41357
TE-1	COSMIC Cell Line Gene CNV Profiles	1.0	3.12177
lidoflazine-5804	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
Squamous cell carcinoma of lung_Lung Tissue_GSE3268	GEO Signatures of Differentially Expressed Genes for Diseases	-1.0	-1.97057
BFTC-909	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78815
CHD1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PPARD-21283829-MYOFIBROBLAST-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
KLM1	CCLE Cell Line Gene CNV Profiles	1.0	1.52964
JJN3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32347
SALE	CCLE Cell Line Gene Expression Profiles	-1.0	-1.96614
RS11846	BioGPS Cell Line Gene Expression Profiles	1.0	1.06216
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08701
BT549	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48582
HCC1195	CCLE Cell Line Gene CNV Profiles	1.0	1.50239
SNU466	CCLE Cell Line Gene Expression Profiles	-1.0	-2.17048
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
NUGC-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.935662
NCI H226	BioGPS Cell Line Gene Expression Profiles	1.0	0.93081
G-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01315
SHSYSY-RA	BioGPS Cell Line Gene Expression Profiles	-1.0	-0.863151
CiliaryGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	0.949099
delsoline-7212	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19368
meclofenoxate-2546	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
POLR2A_A549_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
G-402	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6249
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70053
DMS454	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5474
ECC12	CCLE Cell Line Gene Expression Profiles	-1.0	-1.5811
RH30	CCLE Cell Line Gene CNV Profiles	1.0	2.04699
SNU213	CCLE Cell Line Gene Expression Profiles	-1.0	-1.58259
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JJN-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0437
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.55594
POLR2A	ENCODE Transcription Factor Targets	1.0	null
NCIH522	CCLE Cell Line Gene CNV Profiles	1.0	2.09241
OVMANA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.09983
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24459
HGC-27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08828
Bipolar Disorder_frontal cortex_GSE5389	GEO Signatures of Differentially Expressed Genes for Diseases	1.0	1.96763
OVMANA	CCLE Cell Line Gene CNV Profiles	1.0	1.4157
HCT15	CCLE Cell Line Gene Expression Profiles	1.0	1.49117
RUNX2	ChEA Transcription Factor Targets	1.0	null
CHD1	ENCODE Transcription Factor Targets	1.0	null
YY1_KD_GDS3788_488_human_HeLa	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
HS706T	CCLE Cell Line Gene Expression Profiles	1.0	1.92393
MCF10DCIS.COM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07293
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.933353
TCCSUP	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51607
LN235	CCLE Cell Line Gene CNV Profiles	1.0	1.96103
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.48835
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.839025
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70063
OCIAML2	CCLE Cell Line Gene Expression Profiles	1.0	1.45585
NCIH2196	CCLE Cell Line Gene CNV Profiles	-1.0	-2.1052
M059K	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05309
Appendix	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	1.15275
yy1_20215434_hela_lof_human_gpl570_gds3788	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.064895
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.933353
UACC893	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73139
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.89518
SW1116	CCLE Cell Line Gene Expression Profiles	1.0	3.40796
F5	CCLE Cell Line Gene Expression Profiles	-1.0	-2.04704
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29087
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08828
MYB_01_44	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.62307
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0437
H3K4me1_Fetal Lung	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.942803
KP4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25824
EBC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10027
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.932468
LXF289	CCLE Cell Line Gene Expression Profiles	-1.0	-1.46259
RKN	CCLE Cell Line Gene Expression Profiles	-1.0	-1.95625
EJM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.2867
MEK_INHIBITION_GDS5029_278_human_SW480 KRAS-mutant colorectal cancer cell line - 4hours	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
OVMANA	CCLE Cell Line Gene Expression Profiles	1.0	1.89451
OCILY19	CCLE Cell Line Gene Expression Profiles	-1.0	-1.50213
SuperiorCervicalGanglion	BioGPS Human Cell Type and Tissue Gene Expression Profiles	1.0	2.2603
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.933353
CD8+_Tcells	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-0.919666
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.915427
HOXC6_01_333	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.38014
SF539	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14622
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.943875
NCIH3255	CCLE Cell Line Gene Expression Profiles	1.0	1.53338
NCIH322	CCLE Cell Line Gene Expression Profiles	1.0	2.43586
MOLM16	CCLE Cell Line Gene Expression Profiles	1.0	2.01047
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0437
PECAPJ49	CCLE Cell Line Gene CNV Profiles	-1.0	-2.32978
NCI-H2030	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18099
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.72283
SNU489	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59457
K562	BioGPS Cell Line Gene Expression Profiles	1.0	1.28582
NCI-H322T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07293
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.89063
azacitidine-4010	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
KP4	CCLE Cell Line Gene CNV Profiles	-1.0	-2.04652
SNU-216	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.958138
MDA MB435	BioGPS Cell Line Gene Expression Profiles	1.0	1.07391
HOP-92	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.966574
M059K	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47716
Uterus	BioGPS Human Cell Type and Tissue Gene Expression Profiles	-1.0	-1.18534
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.35395
PARP2_KD_GSE43981_676_human_HepG2	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15293
BICR18	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32597
HSF1_KD_GDS1733_755_human_HeLa cells - 0.5 Hour by siHSF1_2	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
pyrimethamine-4194	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
TE1	CCLE Cell Line Gene CNV Profiles	1.0	1.66007
LS513	CCLE Cell Line Gene Expression Profiles	1.0	1.3844
COV434	CCLE Cell Line Gene Expression Profiles	1.0	1.73835
HS870T	CCLE Cell Line Gene Expression Profiles	1.0	1.45524
KARPAS-422	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62243
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.78815
CALU-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.838164
EFM-192C	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.13148
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.347
T47D	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38952
MJ	CCLE Cell Line Gene Expression Profiles	1.0	1.35992
TE11	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41001
SUM 159PT	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62243
tolbutamide-2359	CMAP Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05157
LAMA84	CCLE Cell Line Gene CNV Profiles	-1.0	-1.70649
NCIH510	CCLE Cell Line Gene Expression Profiles	-1.0	-2.02877
SOX17_OE_GDS3300_124_human_HESC (CA1 and CA2)	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null