association	dataset	threshold value	standardized value
HCC1428	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1361
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.968484
disease of mental health	GWASdb SNP-Disease Associations	1.0	0.040947
POLR2A	ENCODE Transcription Factor Targets	1.0	null
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.913548
SNU-601	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900073
NCI-H1299	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
MDA-MB-361	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.91135
NCI-H1838	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08692
NCI-H1437	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08597
NCI-H250	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
disease of metabolism	GWASdb SNP-Disease Associations	1.0	0.086679
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
G84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02415
diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.274378
NCIH1581	CCLE Cell Line Gene CNV Profiles	-1.0	-1.81174
SNU738	CCLE Cell Line Gene CNV Profiles	1.0	1.94589
OCI-M2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.24357
GCIY	CCLE Cell Line Gene CNV Profiles	1.0	1.56812
HCC2688	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14574
T84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32198
COLO 699	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45677
DMS 53	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14421
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.983402
cognitive disorder	GWASdb SNP-Disease Associations	1.0	0.089075
Skeletal Muscle Female	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	1.0	1.13005
SNU1076	CCLE Cell Line Gene CNV Profiles	-1.0	-2.2664
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08692
SCC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.945433
CHL1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71291
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32365
TFAP2A	JASPAR Predicted Transcription Factor Targets	1.0	null
H9 Cells	Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles	-1.0	-1.07878
PCBP2_02_123	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.0
HCC1599	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.62886
NCI-H1092	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2438
COLO-818	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.926617
RPMI 8226	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08692
NCI-H23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08692
NCIH1437	CCLE Cell Line Gene CNV Profiles	-1.0	-1.36183
diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.30007
glucose metabolism disease	GWASdb SNP-Disease Associations	1.0	0.257782
KYSE-270	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30828
GCIY	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
disease	GWASdb SNP-Disease Associations	1.0	0.026682
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05744
KYSE-70	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.968484
H3K27me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RDES	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32766
SU8686	CCLE Cell Line Gene CNV Profiles	1.0	1.99005
SNU601	CCLE Cell Line Gene CNV Profiles	1.0	1.412
OVCAR-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.944458
PANC0403	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21046
SU.86.86	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84575
COLO 680N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14421
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
HUH-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.981725
LCLC-97TM1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.1177
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
TBL1XR1_02_178	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.63322
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H4K20me1_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.900073
abnormality of the nervous system	GWASdb SNP-Phenotype Associations	1.0	0.038216
NCI-H2170	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05744
BICR31	CCLE Cell Line Gene CNV Profiles	1.0	1.66177
H3K4me1_K562_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
HCC461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969421
SUM 1315M02	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.926617
NCIH1435	CCLE Cell Line Gene CNV Profiles	-1.0	-1.66468
FUOV1	CCLE Cell Line Gene CNV Profiles	1.0	1.34114
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14421
PTBP1_02_131	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60572
GATA3_01_163	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.63875
COV318	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62986
TE9	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76904
E2F6	ENCODE Transcription Factor Targets	1.0	null
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60864
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06366
SK23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.90841
EW8	CCLE Cell Line Gene CNV Profiles	1.0	1.79317
NCI-H1299	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876955
H3K27me3_K562_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acquired metabolic disease	GWASdb SNP-Disease Associations	1.0	0.144184
NCI-H716	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969421
NCIH2227	CCLE Cell Line Gene CNV Profiles	1.0	2.36334
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.76946
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.51875
MHH-NB-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.19453
H4	CCLE Cell Line Gene CNV Profiles	1.0	1.50563
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.945433
RBBP5	ENCODE Transcription Factor Targets	1.0	null
HOP-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1167
KLE	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
NCI-H1581	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.47502
KLE	CCLE Cell Line Gene CNV Profiles	1.0	2.38564
UMC-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.93946
NCIH1299	CCLE Cell Line Gene CNV Profiles	1.0	1.43669
SUB1_02_117	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	3.45943
HUPT3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.95147
MKN1	CCLE Cell Line Gene CNV Profiles	1.0	1.87974
MKN-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.84703
ELK1_01_162	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.62785
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34247
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.65729
H3K9me3_Brain Cingulate Gyrus	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SW 1116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.870015
HCC1534	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.926617
TMD8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28976
HMCB	CCLE Cell Line Gene CNV Profiles	-1.0	-1.55507
H3K4me1_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC1599	CCLE Cell Line Gene CNV Profiles	1.0	1.69217
NCI-H2110	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.8709
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42342
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.55341
H2AFZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
schizophrenia	GWASdb SNP-Disease Associations	1.0	0.517419
928 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08597
EZH2_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TF1	CCLE Cell Line Gene CNV Profiles	1.0	2.09464
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33513
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30728
NCI-H820	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.32843
CHL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.96105
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.11893
AGS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.945433
JEKO1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.02629
type ii diabetes mellitus	GWASdb SNP-Phenotype Associations	1.0	0.50668
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.23525
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05744
MDAMB436	CCLE Cell Line Gene CNV Profiles	-1.0	-1.3957
all	GWASdb SNP-Phenotype Associations	1.0	0.029845
H3K27me3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal glucose homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.196006
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05051
ARID3A_02_193	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.60634
HCC1897	CCLE Cell Line Gene CNV Profiles	-1.0	-1.68036
SNU46	CCLE Cell Line Gene CNV Profiles	-1.0	-2.51819
RERF-GC-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.4285
HCC193	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18052
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.879911
SW 403	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.30828
schizophrenia	GWASdb SNP-Phenotype Associations	1.0	0.441367
QGP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.939165
type 2 diabetes mellitus	GWASdb SNP-Disease Associations	1.0	0.596242
COV318	CCLE Cell Line Gene CNV Profiles	1.0	1.6728
KLE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.50714
POLR2A_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HT1376	CCLE Cell Line Gene CNV Profiles	-1.0	-1.72489
SW1573	CCLE Cell Line Gene CNV Profiles	-1.0	-1.72077
SK-MES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08692
MAX	ENCODE Transcription Factor Targets	1.0	null
HCC2302	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.969421
NCI-H345	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
H3K4me3_iPS DF 19.11	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H2AFZ_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BFTC-905	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.870015
JHESOAD1	CCLE Cell Line Gene CNV Profiles	1.0	2.91419
NB4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76206
LXF-289	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.76079
behavioral abnormality	GWASdb SNP-Phenotype Associations	1.0	0.084837
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24612
OV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.50034
carbohydrate metabolism disease	GWASdb SNP-Disease Associations	1.0	0.257782
LXF289	CCLE Cell Line Gene CNV Profiles	1.0	1.4521
phenotypic abnormality	GWASdb SNP-Phenotype Associations	1.0	0.029881
EZH2	ENCODE Transcription Factor Targets	1.0	null
MFE280	CCLE Cell Line Gene CNV Profiles	1.0	2.34478
RBBP5_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC202	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.876955
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71955
NCIH647	CCLE Cell Line Gene CNV Profiles	1.0	1.77231
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAX_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU869	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37398
YAPC	CCLE Cell Line Gene CNV Profiles	1.0	1.4141
psychotic disorder	GWASdb SNP-Disease Associations	1.0	0.23334
HCC1359	CCLE Cell Line Gene CNV Profiles	-1.0	-1.38979
NCI-H2227	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
SUIT2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.2628
YD10B	CCLE Cell Line Gene CNV Profiles	-1.0	-1.34145
E2F6_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
BICR 31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62986
abnormality of the endocrine system	GWASdb SNP-Phenotype Associations	1.0	0.075041
SNU-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.852845
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08597
TMK-1	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
H3K27me3_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9me3_H1 Derived Mesenchymal Stem Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
TE-6	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
abnormality of metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.046155
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.91135
HPAC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.980562
abnormality of carbohydrate metabolism/homeostasis	GWASdb SNP-Phenotype Associations	1.0	0.180136
A549	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.981725
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.09944
NCI-H1395	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21815
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05744
OVCAR4	CCLE Cell Line Gene CNV Profiles	1.0	1.54593
TE6	CCLE Cell Line Gene CNV Profiles	1.0	1.64902
KCI-MOH1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14574
COLO 741	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18052
H3K27me3_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.28809
OVCA 420	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05744
MFE-280	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
ESRRA_01_280	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.96717
KP-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.08597
NCIH1573	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48781
EZH2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PANC 04.03	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.65612
A549	CCLE Cell Line Gene CNV Profiles	1.0	1.51197
HCC1569	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45677
SAOS-2	COSMIC Cell Line Gene CNV Profiles	1.0	2.39327
HCC827	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02766
YD15	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43551
abnormality of nervous system physiology	GWASdb SNP-Phenotype Associations	1.0	0.051342
H3K27me3_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.45677
KURAMOCHI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.32198
VMRCLCD	CCLE Cell Line Gene CNV Profiles	1.0	1.34897