association dataset threshold value standardized value APLP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.04737 H3K4me3_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GOLGA4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.69522 CDV3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48622 AOB, mitral cell layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.24748 Bronchoalveolar system TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.069 KIF2C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.98209 EPB41L4B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.97741 FKBP9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.01459 AOB, glomerular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.27785 H3K9ac_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XLM4-0011-R8A-SM-4AT44 GTEx Tissue Sample Gene Expression Profiles 1.0 1.88952 GTEX-QDT8-0011-R4A-SM-32PKM GTEx Tissue Sample Gene Expression Profiles 1.0 0.90748 FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.8066 H3K27me3_MEL cell line_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Taenia tecta, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.15466 BMI1 ChEA Transcription Factor Targets 1.0 null GTEX-Q2AG-0011-R1A-SM-2HMJI GTEx Tissue Sample Gene Expression Profiles 1.0 1.12871 NKX6-2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.76716 ARHGAP19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82534 Acrosomal vesicle COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.13 DNMT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.13609 Cortical amygdalar area, posterior part, lateral zone, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04916 BAK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.27732 MGAT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.03324 H2AC20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29913 abnormality of higher mental function GWASdb SNP-Phenotype Associations 1.0 0.257362 cerebellar cortex_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.997319 globose nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.946024 STAT4 MotifMap Predicted Transcription Factor Targets 1.0 null STK4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80056 RCCFG2 DepMap CRISPR Gene Dependency 1.0 2.93248 OSBPL7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.00918 GSE88819_3_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null GTEX-X4XX-0011-R8B-SM-46MWM GTEx Tissue Sample Gene Expression Profiles 1.0 0.868001 CALHM6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44369 SLC25A22 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.72227 GSE148066,GSE157787_2_v_6_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null superficial stratum of SePal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.60187 DPPA3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.67047 Down Syndrome_Brain_GSE5390 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.07968 GSE195559_2_v_7_notch1_human RummaGEO Gene Perturbation Signatures 1.0 null CBY3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80036 pyramidal cells of rostral CA4 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.866167 mantle zone of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.16116 GTEX-NFK9-2226-SM-3MJGP GTEx Tissue Sample Gene Expression Profiles 1.0 0.874583 HEXB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.3704 GTEX-U4B1-1526-SM-4DXSL GTEx Tissue Sample Gene Expression Profiles 1.0 1.91978 GTEX-UPJH-0126-SM-4IHLL GTEx Tissue Sample Gene Expression Profiles 1.0 1.66511 Suprageniculate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.12986 Endomembrane system COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 1.0 1.714 GTEX-XLM4-0011-R4B-SM-4AT5C GTEx Tissue Sample Gene Expression Profiles 1.0 0.989547 SLC18A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45393 GSE147943_4_v_6_cited2_mouse RummaGEO Gene Perturbation Signatures 1.0 null PMC11161988-12906_2024_4523_MOESM3_ESM.pdf-160-ZNF20_ZNF20 Rummagene Transcription Factor Associations 2026 1.0 null GSE88819_7_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null SEMA4G CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.67853 STXBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43956 m1Lim part of the midbrain reticular formation Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21733 NEUROD1_Deficiency_GDS3000_612_mouse_Pineal glands of neonates GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null NALF2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66503 Anteromedial visual area, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.55233 XRCC6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.77053 primary motor cortex (area M1, area 4)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.845308 ANKLE1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.81368 GTEX-UTHO-3026-SM-3GAFB GTEx Tissue Sample Gene Expression Profiles 1.0 0.845787 COX5A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.56579 Central amygdalar nucleus, capsular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.68146 GTEX-S32W-0126-SM-4AD61 GTEx Tissue Sample Gene Expression Profiles 1.0 0.899848 Arid5a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 17.0412 NTMT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.92402 GTEX-RUSQ-2126-SM-47JXK GTEx Tissue Sample Gene Expression Profiles 1.0 1.79555 496100278_FWM_no dementia_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.54891 GGT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13938 SFXN4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.97555 GTEX-SUCS-0526-SM-4DM56 GTEx Tissue Sample Gene Expression Profiles 1.0 0.875984 BL2590 (KAT2B) NURSA Protein Complexes 1.0 null Perturb_8944_KO_RB1_SRP220467 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 8.98059 cognitive impairment GWASdb SNP-Phenotype Associations 1.0 0.576774 Agranular insular area, dorsal part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03767 FOXP3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 14.9757 lateral tuberal nuclei Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.0188 GSE216043_7_v_0_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null ETV2::FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 53.69 GSE160246_0_v_5_cpeb4_mouse RummaGEO Gene Perturbation Signatures 1.0 null GTEX-QVUS-2826-SM-3GADB GTEx Tissue Sample Gene Expression Profiles 1.0 1.01934 AIF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9415 CNOT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.03334 GSE115542_2_v_3_digoxin_human RummaGEO Drug Perturbation Signatures 1.0 null NADSYN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.70836 skeletal muscle HPA Tissue Gene Expression Profiles -1.0 -1.01791 Respiratory system TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.069 SG in primary somatosensory cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.846174 MSMO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.57723 PTPN21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05964 ZNF792 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67895 CDK16 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.62033 DCAF7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.58576 NCI-H508 COSMIC Cell Line Gene CNV Profiles 1.0 4.51153 POLR2A_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null familial atrial fibrillation GWASdb SNP-Disease Associations 1.0 1.04846 ZNF85 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.2038 DPH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.94223 PHYHD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.42689 GSE211474,GSE212779_0_v_1_phf8_human RummaGEO Gene Perturbation Signatures 1.0 null WASL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22997 Taenia tecta, ventral part, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.56186 plicamycin_homo sapiens_gpl570_gse25127 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null GTEX-NPJ8-0011-R2a-SM-2TC6M GTEx Tissue Sample Gene Expression Profiles 1.0 0.977601 GTEX-OHPN-0011-R2A-SM-2I5FB GTEx Tissue Sample Gene Expression Profiles 1.0 1.25133 EMSY CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53081 MRPL43 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.06962 Crus I, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.09058 MOLT-4 COSMIC Cell Line Gene Mutation Profiles 1.0 null 23132-87 COSMIC Cell Line Gene Mutation Profiles 1.0 null FAR/SIN/STRIPAK complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.867 PRDM4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05036 thyroid BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.35006 SNX21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.8629 KIF3A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4704 intracellular part LOCATE Predicted Protein Localization Annotations 1.0 null GSE149903_0_v_7_myd88_mouse RummaGEO Gene Perturbation Signatures -1.0 null GSE171180,GSE171181_0_v_1_e7107_human RummaGEO Drug Perturbation Signatures 1.0 null KIF12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.09943 GSE225901_0_v_1_dexamethasone_human RummaGEO Drug Perturbation Signatures 1.0 null ZNF785 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.27319 membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null VAC14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53464 r3 part of cochlear sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.74975 granular layer of caudal dentate gyrus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.861203 RTL5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.59751 Duodenal somatostatinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 2.247 peripheral portion of GPi Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.23192 FANCF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.61639 dorsolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.05108 LRP10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.0923 MAP2K2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.16679 GSE224547_1_v_0_cftr_human RummaGEO Gene Perturbation Signatures -1.0 null ZNF593 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.38836 inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.38008 TEX261 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.38809 API5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.36192 GSE183994_1_v_0_scml2_mouse RummaGEO Gene Perturbation Signatures 1.0 null PDLIM4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.11498 olfactory bulb Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.8639 RAB10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.21832 ETS2 MotifMap Predicted Transcription Factor Targets 1.0 null UBB_KO_GDS3906_494_mouse_Testis - 21 Days GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GSE210655_3_v_7_cisplatin_mouse RummaGEO Drug Perturbation Signatures -1.0 null Subparafascicular nucleus, magnocellular part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1235 striatum_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.30635 MPZL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.8392 H3K4me1_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GSE223008_6_v_1_calhm6_mouse RummaGEO Gene Perturbation Signatures 1.0 null septopallidal transition area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26101 GTEX-XMD1-0011-R10A-SM-4AT4A GTEx Tissue Sample Gene Expression Profiles 1.0 1.3999 Caput epididymis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.132 TKFC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.45916 PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-4_MYB Rummagene Transcription Factor Associations 2026 1.0 null mRNA_GADD45A_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null paraventricular nuclei, left of thalamus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.19483 Uvula (IX) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16007 Wt1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 123.936 GTEX-PLZ5-0326-SM-3P614 GTEx Tissue Sample Gene Expression Profiles 1.0 0.861931 Folium-tuber vermis (VII) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.23184 Persistent generalized lymphadenopathy DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.608 HS6ST1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.94448 USP20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89891 PMC4595011-pgen.1005555.s001.xlsx-MITF_UP-regulated-Ensembl_gene_id_MITF Rummagene Transcription Factor Associations 2026 1.0 null RBL1_KO_GDS1932_739_mouse_Neurospheres GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null RNF175 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26004 MXI1 ENCODE Transcription Factor Targets 1.0 null REDD1_Repression_GDS3558_73_human_Blood Myeloid Cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null cerebellar cortex_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.09862 GSE134375_6_v_5_stat3_human RummaGEO Gene Perturbation Signatures -1.0 null SLC44A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.30624 EPS8L2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.55221 periventricular stratum of r2Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.4452 SLC25A35 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.82524 GSE165274_1_v_2_poldip2_mouse RummaGEO Gene Perturbation Signatures -1.0 null GTEX-N7MT-0011-R8a-SM-2I5GU GTEx Tissue Sample Gene Expression Profiles 1.0 1.10789 PMC6928094-395_2019_765_MOESM7_ESM.xls-DEGs_AR7_vs_Pre-patterned-List_of_differentially_expressed_genes_in_AR7_vs_Pre-patterned_cells_THRA Rummagene Transcription Factor Associations 2026 1.0 null 496100537_FWM_no dementia_TBI_87_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.45589 PRICKLE3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31379 GSE210101,GSE210114_5_v_3_urod_human RummaGEO Gene Perturbation Signatures 1.0 null mantle zone of r3Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.74975 PMC4595011-pgen.1005555.s001.xlsx-MITF_UP-regulated-Gene_name_MITF Rummagene Transcription Factor Associations 2026 1.0 null GULP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25546 GSE154197_1_v_2_ints13_human RummaGEO Gene Perturbation Signatures 1.0 null caudal (posterior) extramural migratory stream Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.16929 FSD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.89137 MLLT6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.09952 RBPMS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8037 GTEX-S7SE-0011-R2A-SM-2XCDC GTEx Tissue Sample Gene Expression Profiles 1.0 1.30141 GTEX-WL46-0011-R9A-SM-3MJFP GTEx Tissue Sample Gene Expression Profiles 1.0 2.61793 SERPINE1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49886 VAPA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.32708 abnormality of the nervous system GWASdb SNP-Phenotype Associations 1.0 0.042853 VAMP8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.38192 ZFP42 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.0514 posteroventral (inferior) parietal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.42912 GSE198036,GSE198041_4_v_3_sox9_mouse RummaGEO Gene Perturbation Signatures 1.0 null MTCH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.29368 RBL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.06255 GTEX-SNMC-0006-SM-2XCFE GTEx Tissue Sample Gene Expression Profiles 1.0 1.06547 Minor Salivary Gland GTEx Tissue Gene Expression Profiles 2023 1.0 1.47177 GSE203429_0_v_1_angptl8_human RummaGEO Gene Perturbation Signatures -1.0 null HS606T CCLE Cell Line Gene Expression Profiles -1.0 -1.49934 PMC9883165-41375_2022_1744_MOESM3_ESM.xlsx-RNA-Seq_of_CEBPA_specific_genes-RNA-Seq_analysis_of_genes_associated_with_a_DHS_that_has_a_CEBPAx2_specific_Hi-C_interaction_CEBPA Rummagene Transcription Factor Associations 2026 1.0 null GSE151782_2_v_0_aim2_mouse RummaGEO Gene Perturbation Signatures 1.0 null Parapyramidal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 3.3065 SNU503 CCLE Cell Line Gene Expression Profiles -1.0 -1.5681 CD40 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.6468 intracellular organelle LOCATE Predicted Protein Localization Annotations 1.0 null heart conduction disease GWASdb SNP-Disease Associations 1.0 0.369654 MAP3K21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.64453 CHD2_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null accumbens nucleus, shell domain Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21445 paraventricular nuclei, right of thalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.46416 GSE223008_7_v_1_calhm6_mouse RummaGEO Gene Perturbation Signatures 1.0 null sublayer 6a of PCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09498 Primary somatosensory area, lower limb, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.51744 medial vestibular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.02592 CLDN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08426 posterior (caudal) superior temporal cortex (area 22c)_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -2.23312 GTEX-X3Y1-0626-SM-3P5YS GTEx Tissue Sample Gene Expression Profiles 1.0 1.06591 CHST15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.05586 GTEX-XOTO-0011-R6B-SM-4B65X GTEx Tissue Sample Gene Expression Profiles 1.0 0.965942 IL17RC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66805 H3K27me3_ES-Bruce4_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE236072,GSE236075_2_v_1_ccr6_mouse RummaGEO Gene Perturbation Signatures -1.0 null H3K4me1_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null K2 COSMIC Cell Line Gene Mutation Profiles 1.0 null PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-7_MYB Rummagene Transcription Factor Associations 2026 1.0 null GTEX-RN64-2326-SM-48FDW GTEx Tissue Sample Gene Expression Profiles 1.0 1.29028 YMB1 CCLE Cell Line Gene Expression Profiles 1.0 1.36187 SKNFI CCLE Cell Line Gene Expression Profiles 1.0 1.95182 TAL1-30185409-HPC-MOUSE-BONEMARROW-LEUKEMIA ChEA Transcription Factor Targets 2022 1.0 null CYRIB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49589 vestibular nuclei, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.01883 inferolateral temporal cortex (area TEv, area 20)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.877716 interstitial nucleus of the posterior limb of the anterior commissure Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.47936 Prostate-t cell Tabula Sapiens Gene-Cell Associations 1.0 0.440433 cerebellar cortex_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.05456 mRNA_SMAD7_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null H3K4me3_CH12.LX_mm9_5 ENCODE Histone Modification Site Profiles 1.0 null PMC9883165-41375_2022_1744_MOESM3_ESM.xlsx-RNA-Seq_of_CEBPA_specific_genes-Unnamed_1_CEBPA Rummagene Transcription Factor Associations 2026 1.0 null estradiol_mus musculus_gpl4134_gse23072 GEO Signatures of Differentially Expressed Genes for Small Molecules 1.0 null IZ in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.10928 FOXO6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.8429 NIPSNAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96275 VZ in caudal subicular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -2.55478 MKX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.06816 LMO4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7774 H3K4me3_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null DCAF17 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.51062 OVKATE CCLE Cell Line Gene Expression Profiles 1.0 2.07343 Folium-tuber vermis (VII), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.05844 amygdaloid complex_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.02783 H3K27me3_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null 496100554_FWM_no dementia_no TBI_78_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 3.28565 GSE138863_3_v_0_disulfiram_human RummaGEO Drug Perturbation Signatures 1.0 null r7 part of rostral ventromedial reticular area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.66191 GSE148066,GSE157787_9_v_1_n4bp1_mouse RummaGEO Gene Perturbation Signatures -1.0 null MAF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89601 gracile nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.842552 hippocampus (hippocampal formation)_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.852758 pyramidal layer of rostral subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.978144 red nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.923187 dorsal thalamus_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 2.53545 IKZF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 34.4829 ZNF362 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.46028 FOXD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0189 H3K4me1_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ETFB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.40928 GSE137325_3_v_0_copanlisib_human RummaGEO Drug Perturbation Signatures 1.0 null H3K4me1_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null dorsal tuberomammillary nucleus, intermediate part (histaminergic) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51622 CAPG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.04598 Retrosplenial area, lateral agranular part, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.37914 OTX2_silencing_GDS4472_136_human_D425 medulloblastoma (MB) cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null inferolateral temporal cortex (area TEv, area 20)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -3.21009 PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Genes_significantly_differentially_expressed_between_H9_and_GATA6_4ins_at_day_3_in_RNA-seq_GATA6 Rummagene Transcription Factor Associations 2026 1.0 null Kdm1a_KD_GDS5055_274_mouse_3T3-L1 preadipocytes - 24h GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-PWO3-0011-R8A-SM-2I5GD GTEx Tissue Sample Gene Expression Profiles 1.0 1.08648 GSE203308_8_v_10_brf1_mouse RummaGEO Gene Perturbation Signatures -1.0 null GSE158458_2_v_3_sorafenib_human RummaGEO Drug Perturbation Signatures -1.0 null GTEX-OOBJ-2126-SM-3NB1N GTEx Tissue Sample Gene Expression Profiles 1.0 1.73546 PMC11925450-elife-96850-supp2.xlsx-DNMT1_KO_vs_DNMT1_L1TD1_dKO_res-geneName_DNMT1 Rummagene Transcription Factor Associations 2026 1.0 null GTEX-XAJ8-1326-SM-47JYT GTEx Tissue Sample Gene Expression Profiles 1.0 1.9376 PSIP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.90579 septostriatal transition area (accumbens) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00419 GTEX-OXRK-0126-SM-3NB1E GTEx Tissue Sample Gene Expression Profiles 1.0 1.01598 outer SZ in ventrolateral prefrontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.932965 nucleus of the inferior collicular brachium, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.23447 GSE220520_6_v_9_ethanol_mouse RummaGEO Drug Perturbation Signatures 1.0 null abnormality of the cardiovascular system GWASdb SNP-Phenotype Associations 1.0 0.924345 ETNK2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.00509 LB771HNC DepMap CRISPR Gene Dependency 1.0 3.74805 cytoplasmic part COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 PMC5894239-12864_2018_4591_MOESM9_ESM.xlsx-ST12_mir_upregulated-Ensembl_ID_KLF6 Rummagene Transcription Factor Associations 2026 1.0 null CTCF_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MGAT5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.5328 CEND1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.14428 HEC-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null IM95 CCLE Cell Line Gene Expression Profiles -1.0 -2.04073 FOXS1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.516 inner CP in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.19751 EPCAM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.40051 GTEX-OOBK-2126-SM-3LK5T GTEx Tissue Sample Gene Expression Profiles 1.0 1.90504 primary somatosensory cortex (area S1, areas 3,1,2)_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.834351 H3K4me3_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GSE154936_3_v_2_remdesivir_human RummaGEO Drug Perturbation Signatures 1.0 null Cochlear nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.4782 GSE210101,GSE210114_0_v_3_urod_human RummaGEO Gene Perturbation Signatures 1.0 null cerebral cortex HPA Tissue Protein Expression Profiles -1.0 -0.735632 AIP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.06675 NECTIN3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.15783 layer 3 of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21051 SARS-CoV MA15_Day1-PFU-10^4_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.59001 dorsal part of JcP Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04079 GSE211931_1_v_3_ncoa4_mouse RummaGEO Gene Perturbation Signatures -1.0 null superficial stratum of SeStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.81538 primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.47126 GSE198683_1_v_3_dexamethasone_human RummaGEO Drug Perturbation Signatures -1.0 null ISLR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78275 GTEX-N7MT-0011-R4a-SM-2I3G9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.03507 SOX8 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.7145 central glial substance Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.27002 C17orf75 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48651 superficial stratum of AOV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44846 primary motor cortex (area M1, area 4)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.876035 r11 part of the trigeminal column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13876 PARD6A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.18556 superficial stratum of r8BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.40718 ETV5::FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.1715 ISG20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.61431 CHMP1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.74807 ZNF473 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.64148 mantle zone of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13876 VIIIA, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.17345 ventrolateral prefrontal cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.831801 SLC35B3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.34995 HLA-DQB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.32092 LLPH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.64776 horizontal nucleus of the diagonal band, transitional part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.24434 NCAPH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.33995 zona incerta, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.66603 Anteromedial visual area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.43281 TULP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.00503 CES2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87037 GTEX-PVOW-0011-R1A-SM-32PL6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.11802 ARF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.56127 intercalated nucleus of medulla Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.3528 BMI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.97613 EPLC272H CCLE Cell Line Gene Expression Profiles -1.0 -2.01378 GSE160817_3_v_6_slamf6_human RummaGEO Gene Perturbation Signatures -1.0 null GTEX-QMR6-0011-R5A-SM-32PKT GTEx Tissue Sample Gene Expression Profiles 1.0 1.12261 AMIGO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07751 superficial stratum of OB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0074 internal granular layer of CbVCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.17705 ADAMTS8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02277 Anteromedial visual area, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02319 POMGNT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.21545 HCC2814 CCLE Cell Line Gene Expression Profiles -1.0 -1.51362 GSE101336_1_v_3_decitabine_mouse RummaGEO Drug Perturbation Signatures 1.0 null Nr1h3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 20.2579 SGTA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.33183 cerebellar vermis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.08108 ERLIN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.42523 r2 part of principal trigeminal sensory nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09656 GSE88819_0_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null EIF2D CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.59208 SPEGNB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08787 H3K9ac_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Accessory olfactory bulb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.55563 CIAO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87359 tissues, cell types and enzyme sources TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 Taenia tecta, dorsal part, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05046 SKNMC CCLE Cell Line Gene Expression Profiles 1.0 1.43139 basal ventral medial nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.908117 PMC8755441-mmc3.xlsx-IRF7-Up-Symbol_1_IRF7 Rummagene Transcription Factor Associations 2026 1.0 null CYP2R1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29977 COA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.10489 PRR35 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.4966 Muscle - Skeletal GTEx Tissue Gene Expression Profiles 2023 1.0 5.72383 ABCC10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74625 EMX2_Deficiency_GDS3173_607_mouse_Embryonic urogenital epithelium - day 10.5 GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null H3K36me3_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null SLC25A36 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.25371 dorsal juxtacommissural pretectal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41753 GSE223008_7_v_12_calhm6_mouse RummaGEO Gene Perturbation Signatures 1.0 null PBX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.9358 ZNF766 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.5512 ARHGAP45 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.27902 PTGIS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84222 DDX20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.6159 caudal portion of VFC (area 44) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.6633 GALNT3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.01449 mRNA_MYCN_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null Infralimbic area, layer 2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16805 MMS19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05468 TMEM121B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46877 CTCF_kidney_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE140937,GSE140938_0_v_2_slfn11_human RummaGEO Gene Perturbation Signatures 1.0 null GSE220520_6_v_0_ethanol_mouse RummaGEO Drug Perturbation Signatures 1.0 null primary visual cortex (striate cortex, area V1/17)_37 yrs_M_12303 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.29037 MCC26 COSMIC Cell Line Gene Mutation Profiles 1.0 null ZBTB10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.02947 H3C11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.14025 GSE189859,GSE189861_0_v_2_idh1_human RummaGEO Gene Perturbation Signatures 1.0 null MYOC_OE_GDS1640_269_mouse_retina GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null THOC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.11415 GSE179974_3_v_0_carboplatin_mouse RummaGEO Drug Perturbation Signatures 1.0 null SHISA9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.47705 Inferior olivary complex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.52538 posteroventral (inferior) parietal cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.22749 OTUD5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.03718 YWHAQ CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.1702 LATS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05902 GSE148066,GSE157787_5_v_4_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null striatum_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.897076 CEP192 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.13306 r2 part of vestibular nucleus Y Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.4452 DCUN1D4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.71794 intermediate stratum of SePal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02337 H3K4me3_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of r10Ve Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41869 H2795 COSMIC Cell Line Gene Mutation Profiles 1.0 null Declive (VI), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.62371 IFT172 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.54113 HMBS CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13285 Ski complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 1.397 GTEX-T6MO-0126-SM-4DM6X GTEx Tissue Sample Gene Expression Profiles 1.0 0.926569 mRNA_FOXJ2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null KELLY CCLE Cell Line Gene Expression Profiles 1.0 2.65491 cSARS Bat SRBD_36Hour_None_GSE37827 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.91114 AOB, internal plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.39526 UFM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.82697 H3K27me3_erythroblast_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MXD4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.98131 GTEX-S4Q7-1226-SM-4AD5I GTEx Tissue Sample Gene Expression Profiles 1.0 1.79439 496100577_FWM_probable Alzheimer's disease_TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.74526 Cortical amygdalar area, posterior part, medial zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00207 HSOS1 DepMap CRISPR Gene Dependency 1.0 3.31063 E2F4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31911 TBKBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.15091 H3K79me2_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null DISP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.52616 cytoplasmic part LOCATE Predicted Protein Localization Annotations 1.0 null DRAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.59609 GTEX-WL46-0011-R6A-SM-3LK6X GTEx Tissue Sample Gene Expression Profiles 1.0 1.05298 BLOC1S6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.91553 primary auditory cortex (core)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.05892 SF126 DepMap CRISPR Gene Dependency 1.0 2.07142 Bone_Marrow-hematopoietic stem cell Tabula Sapiens Gene-Cell Associations 1.0 0.712778 NEUROD2-26341353-CORTEX-MOUSE ChEA Transcription Factor Targets 2022 1.0 null GSE120612_4_v_5_etoposide_human RummaGEO Drug Perturbation Signatures -1.0 null GSE229468,GSE229471_0_v_3_znf587_human RummaGEO Gene Perturbation Signatures -1.0 null periventricular stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38595 EIF4A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.65988 IGSF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.37193 EP300 ENCODE Transcription Factor Targets 1.0 null GTEX-XMD1-0011-R5A-SM-4AT47 GTEx Tissue Sample Gene Expression Profiles 1.0 1.12745 dorsolateral prefrontal cortex_26 pcw_F_12949 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.10306 BHMT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.86019 PREPL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.44561 HEY2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26964 r3 part of anteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.50729 PRPF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.49453 DLX6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.88418 brain GTEx Tissue Gene Expression Profiles 1.0 1.71982 SEPHS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.78893 CHSY1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47385 FOXC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9445 MAX_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null dentate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.2207 Dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.20283 GSE196962_4_v_3_parg_human RummaGEO Gene Perturbation Signatures -1.0 null PANO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.81654 fastigial nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.17375 HCC78 DepMap CRISPR Gene Dependency 1.0 2.54837 intermediate stratum of JcPD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0417 GSE148066,GSE157787_3_v_6_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null temporal pole, right, medial aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.60278 Primary somatosensory area, lower limb, layer 6a Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.40783 NDUFS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.27036 KAT2A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.89746 COPS7A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.43988 H3K4me3_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null POLQ CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.85922 GTEX-WWYW-0011-R10A-SM-3NB35 GTEx Tissue Sample Gene Expression Profiles 1.0 0.915275 ZFYVE19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75053 B3GAT3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.23703 BTBD18 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.71501 TAF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56234 MARVELD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.23216 GTEX-R55E-0011-R8A-SM-2TC66 GTEx Tissue Sample Gene Expression Profiles 1.0 1.17166 UBQLN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.80959 arrhythmia GWASdb SNP-Phenotype Associations 1.0 0.22991 mRNA_ATF3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-QVJO-0011-R6A-SM-2S1QN GTEx Tissue Sample Gene Expression Profiles 1.0 0.862516 DDB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48121 H3K4me3_MEL cell line_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null QRS interval (sulfonylurea treatment interaction) GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.722185 inner CP in dorsomedial frontal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.21673 H3K4me1_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null PMC10149505-41392_2023_1393_MOESM2_ESM.xlsx-CPCMR-Hugo_Symbol_MEIS2 Rummagene Transcription Factor Associations 2026 1.0 null SDHAF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.79703 GSE210101,GSE210114_4_v_3_urod_human RummaGEO Gene Perturbation Signatures 1.0 null Microglial cell line TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.971 posteromedial visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00427 GSE151612_0_v_7_pracinostat_human RummaGEO Drug Perturbation Signatures 1.0 null PRSS53 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.72242 inferolateral temporal cortex (area TEv, area 20)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.45803 OGG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41114 IBTK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.38927 striatum_12 pcw_F_12835 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.926727 CDKN1C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.73634 atrial fibrillation GWASdb SNP-Phenotype Associations 1.0 0.919744 GSE174383_6_v_7_ly6d_mouse RummaGEO Gene Perturbation Signatures -1.0 null oculomotor nuclear complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.938719 NEFL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.72945 GTEX-UPK5-1126-SM-3GAEJ GTEx Tissue Sample Gene Expression Profiles 1.0 0.89522 mediodorsal nucleus of thalamus_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.97958 GSE124410_2_v_5_stk40_mouse RummaGEO Gene Perturbation Signatures 1.0 null HERC4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.5783 MRPL14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26972 CHD6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68981 TIMM17B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.88712 ZNF284 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96833 C20orf96 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.51809 C10orf88 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.23445 UBE2V2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.26088 GRK2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.58553 CHL1 CCLE Cell Line Gene Expression Profiles 1.0 1.61705 PMC10154349-41418_2023_1142_MOESM6_ESM.xlsx-Sheet1-Supplementary_data_3_Genes_positively_correlated_with_HOXC13-AS_in_skin_granular_cells_correlation_coefficients_cor_0_FDR_0_05_HOXC13 Rummagene Transcription Factor Associations 2026 1.0 null RHOU CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.91677 H3K27me3_erythroblast_mm9_3 ENCODE Transcription Factor Binding Site Profiles 1.0 null Nucleus of the brachium of the inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.42564 MACROH2A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47862 CORO1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.32936 H3K4me3_lung_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null PRM3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.55882 H3K4me1_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null GTEX-T6MN-0011-R1A-SM-32QOY GTEx Tissue Sample Gene Expression Profiles 1.0 1.2605 GTEX-QVUS-0011-R4A-SM-3GAE7 GTEx Tissue Sample Gene Expression Profiles 1.0 0.987082 SIN3A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null microcellular tegmental nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11787 FAM167B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.50122 GTEX-NPJ7-0011-R1a-SM-3GACT GTEx Tissue Sample Gene Expression Profiles 1.0 0.994858 TAF5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80961 pineal body Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.898533 PMC7021759-41467_2020_14682_MOESM8_ESM.xlsx-Downregulated_Genes-Table_S5_Downregulated_genes_in_MYCN_amplified_neuroblastoma_relative_to_non-amplified_MYCN Rummagene Transcription Factor Associations 2026 1.0 null GTEX-XLM4-1526-SM-4AT6D GTEx Tissue Sample Gene Expression Profiles 1.0 1.88701 cortex of cerebellar vermis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.11577 H3K27ac_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CBLN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44515 GTEX-TSE9-0011-R9A-SM-3DB7Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.35707 ZZEF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0377 GSE235701,GSE261434_2_v_3_enasidenib_human RummaGEO Drug Perturbation Signatures -1.0 null embryonic stem feeder layer BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.22684 karpas707 HPA Cell Line Gene Expression Profiles 1.0 0.877083 striatum_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.16818 choroid plexus of the lateral ventricle Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.491 VPS11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.54107 PRSS16 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.20176 laterodorsal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04153 GTEX-WVLH-0011-R8A-SM-3MJFC GTEx Tissue Sample Gene Expression Profiles 1.0 0.844829 GSE112760,GSE112767_1_v_5_ddx6_mouse RummaGEO Gene Perturbation Signatures -1.0 null primary motor cortex (area M1, area 4)_3 yrs_F_12836 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.871014 MYC_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null RELT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74122 GSE189859,GSE189861_1_v_2_idh1_human RummaGEO Gene Perturbation Signatures 1.0 null 496100608_FWM_no dementia_no TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.03388 NOMO2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41362 SEC24C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.42998 WDHD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74242 IKBIP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.96488 mantle zone of JcPD Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.04079 GSE233183,GSE233187_3_v_9_larp1_human RummaGEO Gene Perturbation Signatures 1.0 null NCI-H1651 COSMIC Cell Line Gene Mutation Profiles 1.0 null CTAGE15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43132 TAF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84805 RSRC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.20986 VZ in caudal hippocampal proper Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.836533 ZNF273 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.71292 RNF10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07091 SMC1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.88292 GTEX-XOTO-0011-R9A-SM-4GICI GTEx Tissue Sample Gene Expression Profiles 1.0 1.50881 GCC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.06079 CLK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.69113 MAZ_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null SCRN2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79064 FAM3C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66545 ZXDC1_KD_GSE45417_686_human_U937 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null CYP26A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.09472 KYSE410 CCLE Cell Line Gene Expression Profiles -1.0 -1.93888 ZNF341 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 18.6009 liver HPA Tissue Protein Expression Profiles -1.0 -1.02941 Adrenal gland TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.069 RAVER1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.07952 intracellular membrane-bounded organelle LOCATE Predicted Protein Localization Annotations 1.0 null GTEX-S33H-0126-SM-4AD62 GTEx Tissue Sample Gene Expression Profiles 1.0 1.40626 RIMS3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.36719 TBK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13388 ARID1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.72453 EIF4A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30403 Orbital area, medial part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02788 CTCF ENCODE Transcription Factor Targets 1.0 null FGFR3_KD_GSE41035_77_human_RT112 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GSE160246_0_v_7_cpeb4_mouse RummaGEO Gene Perturbation Signatures 1.0 null ARFIP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.94123 GSE135350_3_v_6_dexamethasone_human RummaGEO Drug Perturbation Signatures 1.0 null ZNF251 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.40728 PAPSS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.0682 MTHFD1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.69258 LPIN2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.71251 TMEM238 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.85763 Crus II, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.08026 SOX17 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7601 Pyramus (VIII), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.49179 H3K27ac_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CEBPB-26923725-CHIP-SEQ-HEMOGENIC-ENDOTHELIUM-MOUSE ChEA Transcription Factor Targets 2022 1.0 null intermediate stratum of m1Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.21733 layer IIIb of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.967653 BHLHE23 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.7546 GSE175787_11_v_0_rhoc_human RummaGEO Gene Perturbation Signatures -1.0 null GSE211744_7_v_4_gdf15_mouse RummaGEO Gene Perturbation Signatures 1.0 null GSE174498,GSE174500_3_v_4_asparaginase_human RummaGEO Drug Perturbation Signatures -1.0 null GTEX-RM2N-1326-SM-48FCW GTEx Tissue Sample Gene Expression Profiles 1.0 1.45087 GPR143 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07136 IZ in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.13578 ARHGAP5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.79696 RLN2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.55566 JAR COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K27me3_megakaryocyte_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null STYX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78211 KCTD10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.24099 primary somatosensory cortex (area S1, areas 3,1,2)_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.3425 GTEX-X5EB-2026-SM-4E3KA GTEx Tissue Sample Gene Expression Profiles 1.0 1.78477 GTEX-SNOS-1126-SM-4DM67 GTEx Tissue Sample Gene Expression Profiles 1.0 1.63418 RAGE_knockout_268_GDS3755 GEO Signatures of Differentially Expressed Genes for Kinase Perturbations 1.0 1.9443 GSE213228_2_v_5_irak2_human RummaGEO Gene Perturbation Signatures 1.0 null DDX17 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05515 CYB5A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.66717 mRNA_POU5F1_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GSE140936,GSE140938_2_v_1_slfn11_human RummaGEO Gene Perturbation Signatures 1.0 null substantia nigra, reticular part Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.09543 KLF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.09207 cuneate nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.24472 LCORL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.23731 inner CP in midcingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.08719 H3K4me3_erythroblast_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null METTL13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44323 GTEX-XOTO-0011-R1B-SM-4B65C GTEx Tissue Sample Gene Expression Profiles 1.0 0.958172 Accessory olfactory bulb, mitral layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.43789 GTEX-NPJ7-0011-R5a-SM-33HBK GTEx Tissue Sample Gene Expression Profiles 1.0 0.894964 fallopiantube_8c HPA Tissue Sample Gene Expression Profiles 1.0 1.04734 GTEX-QVJO-0011-R8A-SM-447C7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.12105 GOT1L1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.77042 DECR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4154 GTEX-S7PM-0626-SM-4AD4Q GTEx Tissue Sample Gene Expression Profiles 1.0 2.14539 IDI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.52126 BRK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08346 SARS-CoV MA15_Day4-PFU-10^4_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.06355 SIAH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56138 amygdaloid complex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.10306 PA-TU-8902 COSMIC Cell Line Gene Mutation Profiles 1.0 null superficial stratum of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.27891 GSE139948_3_v_1_metformin_mouse RummaGEO Drug Perturbation Signatures 1.0 null GTEX-O5YT-2126-SM-3MJGD GTEx Tissue Sample Gene Expression Profiles 1.0 1.33362 r6 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.01008 posterolateral cortical amygdaloid area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27159 KCTD17 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.08508 HAND2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.6691 DNM1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.81683 GTEX-T2IS-0011-R2A-SM-32QPF GTEx Tissue Sample Gene Expression Profiles 1.0 1.39393 GSE148066,GSE157787_11_v_6_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null MSN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.17213 intermediate stratum of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.10471 NCIH460 CCLE Cell Line Gene Expression Profiles 1.0 3.40796 ABHD17B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.77244 inferolateral temporal cortex (area TEv, area 20)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.11897 SG in dorsomedial parietal cortex (area 7m) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.26799 CMTM7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75634 GTEX-WZTO-0011-R1B-SM-3NMAR GTEx Tissue Sample Gene Expression Profiles 1.0 1.23615 AEBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.56341 Interstitial nucleus of Cajal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.00502 periventricular stratum of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21089 GTEX-N7MS-0011-R1a-SM-2HMJG GTEx Tissue Sample Gene Expression Profiles 1.0 0.901393 ZNF669 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.50924 LRATD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74053 MXRA7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.72865 H3K4me3_CH12.LX_mm9_4 ENCODE Histone Modification Site Profiles 1.0 null GSE211177,GSE211178_0_v_11_ets1_mouse RummaGEO Gene Perturbation Signatures 1.0 null HCC1187 DepMap CRISPR Gene Dependency 1.0 2.01546 ETV1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.6467 L1236 CCLE Cell Line Gene Expression Profiles 1.0 2.21237 Primary somatosensory area, lower limb, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.53692 VZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.73715 medial amygdala, anterodorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.14524 internal cortical nucleus of inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.40878 NCIH1339 CCLE Cell Line Gene Expression Profiles 1.0 1.70598 hMPV_6Hour_18234263_GSE8961 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.82424 MT-ND1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.7337 GTEX-UTHO-0011-R3A-SM-3GIK8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.932052 H3K4me1_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null STOX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.63647 TDRD9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44102 superior rostral gyrus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.45798 GTEX-QDT8-0011-R5A-SM-32PKN GTEx Tissue Sample Gene Expression Profiles 1.0 0.978888 CDX4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.0109 Brain TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 liver HPA Tissue Gene Expression Profiles -1.0 -1.01791 GSE130437_2_v_1_palbociclib_human RummaGEO Drug Perturbation Signatures 1.0 null GTEX-U3ZH-1526-SM-4DXV1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.2492 TMEM19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.2618 Nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 PMC8104016-hcg-12-e002353-s010.xlsx-mTHP1-LPS_30kb-Nearest_reported_Gene_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null MAP2K7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.81244 GTEX-R55E-0726-SM-48FCZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.94951 MLF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.53728 LENG8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4806 H3K27me3_G1E_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-N7MS-0011-R4a-SM-2HMKW GTEx Tissue Sample Gene Expression Profiles 1.0 1.17651 GSE129293_0_v_1_chd4_human RummaGEO Gene Perturbation Signatures 1.0 null ZNF670 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.47766 AIFM2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.1862 COL6A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.87102 NOMO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.35034 H3K4me1_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null PMC10614035-2022_281869_LUTGE_SUPPL_TABLES4.xlsx-TP53-Unnamed_0_TP53 Rummagene Transcription Factor Associations 2026 1.0 null septostriatal part of the olfactory tuberculum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.81386 GSE124410_6_v_4_stk40_mouse RummaGEO Gene Perturbation Signatures 1.0 null Bronchus TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.069 GTEX-Q2AG-0011-R2A-SM-2HMIT GTEx Tissue Sample Gene Expression Profiles 1.0 1.76684 primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.05868 Medial geniculate complex, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38305 PRDX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.04936 MYC ChEA Transcription Factor Targets 1.0 null SG in midinferior temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.29934 mediodorsal nucleus of thalamus_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.41879 H3K27me3_megakaryocyte_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GNG12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.54183 TYK2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.97006 MOCS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.43707 RSL1D1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.43208 H3K4me3_brain_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null central medullary reticular group, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.862763 outer SZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.1317 DNAJC19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0572 pancreas BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.965793 NECAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.11286 DPP7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.583 GSE224157_2_v_1_doxorubicin_mouse RummaGEO Drug Perturbation Signatures -1.0 null POU2F1::SOX2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.0093 cingulum bundle, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.05925 GPR180 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.52707 GTEX-OHPN-0011-R9A-SM-4DXUH GTEx Tissue Sample Gene Expression Profiles 1.0 1.5302 Small intestine cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.413 CTH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15237 DEL CCLE Cell Line Gene Expression Profiles 1.0 1.5113 CXorf38 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.52222 GTEX-XBEW-0226-SM-4AT6A GTEx Tissue Sample Gene Expression Profiles 1.0 1.02167 Head TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 TMED9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.91001 MSI2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45606 GTEX-T5JC-0011-R2A-SM-32PLZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.32195 GSE235066_4_v_3_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null TRAF7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84295 GTEX-T6MN-0726-SM-32PML GTEx Tissue Sample Gene Expression Profiles 1.0 0.95778 CTCF_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MYF6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.17876 H3K27ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XGQ4-2026-SM-4AT6G GTEx Tissue Sample Gene Expression Profiles 1.0 2.00924 GSE175787_8_v_10_rhoc_human RummaGEO Gene Perturbation Signatures 1.0 null H3K4me1_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null cingulum bundle, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.52886 GTEX-O5YV-1126-SM-3LK73 GTEx Tissue Sample Gene Expression Profiles 1.0 0.854326 primary atrial arrhythmia GWASdb SNP-Phenotype Associations 1.0 0.919744 IRF2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 45.5 EN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.32924 GSE172494_2_v_1_nicotinamide_human RummaGEO Drug Perturbation Signatures 1.0 null GTEX-OIZI-0126-SM-3NB13 GTEx Tissue Sample Gene Expression Profiles 1.0 1.26357 CNDP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02148 496100391_FWM_no dementia_TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.57645 phenotypic abnormality GWASdb SNP-Phenotype Associations 1.0 0.033897 HP1BP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.33954 ZNF675 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 65.5154 GSE216043_10_v_0_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null IRX5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.34185 H3K4me1_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NL4W-0011-R9a-SM-2I3G1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.42306 supraventricular tachycardia GWASdb SNP-Phenotype Associations 1.0 0.919744 NOTCH3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.61052 TP63 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.4259 fallopiantube_8d HPA Tissue Sample Gene Expression Profiles 1.0 1.12558 GTEX-X4XX-0011-R5A-SM-46MWN GTEx Tissue Sample Gene Expression Profiles 1.0 1.34265 HUWE1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.06203 posteroventral (inferior) parietal cortex_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.33656 GTEX-QMR6-0011-R1A-SM-32PKW GTEx Tissue Sample Gene Expression Profiles 1.0 1.26525 GSE186483_2_v_0_lrrk2_mouse RummaGEO Gene Perturbation Signatures -1.0 null B3GAT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.07339 PMC8104016-hcg-12-e002353-s006.xlsx-mTHP-1-LPS_Prom-Distal-RefSeq_Name_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null C19orf53 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.50049 cerebellar cortex_2 yrs_F_12979 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.824807 MEIS1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.2217 PMC5894239-12864_2018_4591_MOESM9_ESM.xlsx-ST12_mir_upregulated-Gene_name_KLF6 Rummagene Transcription Factor Associations 2026 1.0 null FHIP2A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29821 GTEX-WFG8-1926-SM-4LVM1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.45146 EIF2AK4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80688 ZNF184 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 43.9319 primary motor cortex (area M1, area 4)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.08008 GSE160304,GSE163392_7_v_3_zswim8_human RummaGEO Gene Perturbation Signatures 1.0 null NCI-H322M COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me1_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null RING1B-27294783-CHIP-SEQ-NPCS-MOUSE ChEA Transcription Factor Targets 2022 1.0 null NDUFS3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02545 lateral reticular nucleus (principal part) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.833038 Q fever DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.723 Leucine-rich repeat InterPro Predicted Protein Domain Annotations 1.0 null Cauda epididymis TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.872 UBE2E3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80705 TNIK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.03523 GSE216043_7_v_9_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null r7 part of the posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29318 SNU1033 DepMap CRISPR Gene Dependency 1.0 5.49595 PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-PBX3_PBX3 Rummagene Transcription Factor Associations 2026 1.0 null FIGNL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.36137 OCI-AML5 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me3_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null MAPK11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.16568 MYRF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.23002 CARHSP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15493 IL11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.08707 GTEX-QVUS-0011-R1A-SM-3GAD2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.18122 mantle zone of SeStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.00466 H3K4me3_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null AOB, outer plexiform layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02835 APELA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.35762 inner SZ in superolateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.41432 disease of anatomical entity GWASdb SNP-Disease Associations 1.0 0.036948 H3K4me3_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GSE197562_0_v_3_nox4_mouse RummaGEO Gene Perturbation Signatures -1.0 null Arid3b JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 37.7064 superficial stratum of cerebellar vermis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.11483 DENR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.43861 NEK8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.93589 layer 1 of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11002 HT29 CCLE Cell Line Gene Expression Profiles -1.0 -1.45183 primary motor cortex (area M1, area 4)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.49282 HNRNPDL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.11452 CHST10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60999 primary visual cortex (striate cortex, area V1/17)_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.82647 GTEX-XMD1-0011-R3B-SM-4AT5R GTEx Tissue Sample Gene Expression Profiles 1.0 1.17008 CAND2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.39511 ZNF829 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37535 KIF20B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.52762 CHGB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34995 ZNF366 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.58351 DTD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.82454 FADS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.09092 cellular_component LOCATE Predicted Protein Localization Annotations 1.0 null GTEX-W5X1-2826-SM-3GILM GTEx Tissue Sample Gene Expression Profiles 1.0 0.86532 amygdaloid complex_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.04811 SLC22A31 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08684 superficial stratum of r2Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09576 lateral terminal nucleus of the accessory optic tract, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27333 WRNIP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02755 JOSD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.00043 GSE118794_5_v_4_zmynd8_mouse RummaGEO Gene Perturbation Signatures -1.0 null SEMA4A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.35877 MFF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.99543 EXOSC9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25352 posteroventral (inferior) parietal cortex_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.01432 SNU886 DepMap CRISPR Gene Dependency 1.0 4.4827 molecular layer of CbVCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07297 KLF5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.62201 GTEX-P4QS-2126-SM-3NMCF GTEx Tissue Sample Gene Expression Profiles 1.0 1.41679 Taenia tecta, dorsal part, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.3284 PBDC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7422 anterior orbital gyrus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.908561 POLR2A_small intestine_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null MOTN1 CCLE Cell Line Gene Expression Profiles 1.0 1.49543 FOXJ2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48166 CEP72 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05569 PDK3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.63988 primary motor cortex (area M1, area 4)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.66066 POLR2A_spleen_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-WVLH-0011-R6A-SM-3MJFZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.08118 CHCHD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.77288 PPARG-20176806-MACROPHAGES-MOUSE ChEA Transcription Factor Targets 2022 1.0 null Ppara JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 16.3223 496100483_FWM_possible Alzheimer's disease_TBI_100+_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.34841 superior colliculus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.997722 KMS11 DepMap CRISPR Gene Dependency 1.0 2.78405 TMEM126A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.829 KARPAS-45 COSMIC Cell Line Gene Mutation Profiles 1.0 null OSBPL10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.33498 organelle LOCATE Predicted Protein Localization Annotations 1.0 null Primary somatosensory area, lower limb, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.79816 H3K4me3_limb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TMK1 DepMap CRISPR Gene Dependency 1.0 2.02409 Declive (VI) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.66734 HSPA1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.50475 ABCG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.39236 cellular_component COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 H3K27me3_erythroblast_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null intracellular organelle COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 PAFAH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82456 substantia nigra, pars reticulata, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.24787 Taenia tecta, ventral part, layer 3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.96695 RDH14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41426 KLHDC9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.33418 caudal presubiculum (postsubiculum) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.15675 GSE135030_8_v_2_fludarabine_human RummaGEO Drug Perturbation Signatures -1.0 null HCC2998 DepMap CRISPR Gene Dependency 1.0 2.31412 PAK6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.13253 HOXA5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.701 corpus callosum Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.19308 GTEX-RVPU-0011-R9A-SM-3NM8E GTEx Tissue Sample Gene Expression Profiles 1.0 2.58499 ITPRIPL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76744 TRAPPC2L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.22789 preoptic BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -2.65123 primary auditory cortex (core)_19 yrs_F_12832 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.944019 LRP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.41948 TK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.20544 SOX10 MotifMap Predicted Transcription Factor Targets 1.0 null AOC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.8909 intermediate stratum of m2Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.37117 Stat2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 60.7209 ZFAND2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.72039 GTEX-SUCS-1326-SM-4DM5T GTEx Tissue Sample Gene Expression Profiles 1.0 1.39813 POLR2A_testis_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null APP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.55053 DLG4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.33473 GTEX-X4EP-0011-R2B-SM-3P625 GTEx Tissue Sample Gene Expression Profiles 1.0 1.15483 chr13_46222976_C_T_b38 GTEx eQTL 2025 1.0 1.11469 GTEX-POYW-1226-SM-2XCEP GTEx Tissue Sample Gene Expression Profiles 1.0 0.83305 SNU-387 COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-NPJ8-0011-R9a-SM-2YUN5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.37075 KPNYS DepMap CRISPR Gene Dependency 1.0 2.16693 GSE239844_11_v_2_crizotinib_human RummaGEO Drug Perturbation Signatures -1.0 null MAL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.62474 GTEX-P44H-0011-R1A-SM-3NM8J GTEx Tissue Sample Gene Expression Profiles 1.0 1.0487 H3K4me3_cerebellum_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NPJ8-1526-SM-2D7VU GTEx Tissue Sample Gene Expression Profiles 1.0 0.906952 RAB3A_KO_GDS2483_701_mouse_Hippocampus GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null GTEX-QDT8-2926-SM-32PKC GTEx Tissue Sample Gene Expression Profiles 1.0 0.853954 GSE216043_7_v_4_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null r2 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2787 AP-2rep MotifMap Predicted Transcription Factor Targets 1.0 null ZNF354B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.55048 H3K4me3_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null all GWASdb SNP-Phenotype Associations 1.0 0.033816 FOXO4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.1483 subparafascicular nucleus of thalamus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.57407 GTEX-NPJ8-0011-R1a-SM-33HCB GTEx Tissue Sample Gene Expression Profiles 1.0 1.13353 LARP4B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74888 abnormality of cardiovascular system physiology GWASdb SNP-Phenotype Associations 1.0 0.103581 submedius thalamic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.22569 TALL1 CCLE Cell Line Gene Expression Profiles 1.0 1.92656 Somatostatinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.128 mRNA_ZFAND3_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null posterodorsal tegmental nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.45077 posteroventral (inferior) parietal cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.2538 BRF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.01771 Taenia tecta Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.26366 SUB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43833 GRHL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 41.6219 MAML1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.19806 BEX4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.21174 PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-HOXB3_HOXB3 Rummagene Transcription Factor Associations 2026 1.0 null GTEX-WHSE-0011-R2A-SM-3P5ZL GTEx Tissue Sample Gene Expression Profiles 1.0 1.22476 CAS1 DepMap CRISPR Gene Dependency 1.0 3.89261 DIMT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.88683 SKMEL30 DepMap CRISPR Gene Dependency 1.0 2.26839 superficial stratum of r7BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.76293 H3K4me1_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TSR3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.8845 GTEX-T6MN-2026-SM-4DM7L GTEx Tissue Sample Gene Expression Profiles 1.0 2.18165 reticular nucleus of thalamus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.35634 H3K4me3_erythroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-N7MT-0011-R6a-SM-2I3G3 GTEx Tissue Sample Gene Expression Profiles 1.0 0.840626 TM9SF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.69191 r6 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.38802 NB7 DepMap CRISPR Gene Dependency 1.0 3.19732 PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-6_MYB Rummagene Transcription Factor Associations 2026 1.0 null H3K27ac_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XLM4-0011-R2B-SM-4AT5Z GTEx Tissue Sample Gene Expression Profiles 1.0 1.25492 PDGFB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.88412 striatum_17 pcw_F_12880 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.909858 RAB39A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.91678 Nobox JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.4474 primary auditory cortex (core)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.41254 layer V of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.426 H3K4me3_ES-E14_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null PMC9374162-mmc4.xls-KD_gene_list_heatmap_235_genes-Gene_name_AR Rummagene Transcription Factor Associations 2026 1.0 null GTEX-QEG4-0126-SM-48TZE GTEx Tissue Sample Gene Expression Profiles 1.0 1.9698 GSE135030_3_v_9_fludarabine_human RummaGEO Drug Perturbation Signatures 1.0 null SLC35B4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.3541 ZNF624 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46297 GTEX-X4XX-0011-R1B-SM-3P622 GTEx Tissue Sample Gene Expression Profiles 1.0 1.09208 EXTL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.34479 MAX ENCODE Transcription Factor Targets 1.0 null PL-21 COSMIC Cell Line Gene Mutation Profiles 1.0 null GLUD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.95771 SCAF11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.29522 SRPRB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.51216 AKT1_OE_GDS2308_498_mouse_heart GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null mRNA_CDX2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null ST6GAL1_Deficiency_GDS3151_608_mouse_Mammary tumors GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null PIWIL4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29146 abnormality of nervous system physiology GWASdb SNP-Phenotype Associations 1.0 0.059905 GSE191105_2_v_4_nat1_mouse RummaGEO Gene Perturbation Signatures -1.0 null NR0B1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.32387 CHSA0011 COSMIC Cell Line Gene Mutation Profiles 1.0 null ACADM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.8404 Perturb_8459_KO_SOX9_SRP399992 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -20.0 Anteromedial visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.6717 cytoplasm COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 PER3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.39762 STAT6 MotifMap Predicted Transcription Factor Targets 1.0 null IQGAP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46925 RNA helicase p68_KD_GDS2152_625_mouse_skeletal muscle cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null golgi apparatus COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 Salivary_Gland-cd8-positive, alpha-beta t cell Tabula Sapiens Gene-Cell Associations 1.0 0.576605 primary auditory cortex (core)_30 yrs_F_12290 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.929793 PPP1R13B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.61855 MAK16 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.52089 Taenia tecta, ventral part, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.9305 PMC9894241-pnas.2211429119.sd05.xlsx-G8_REST-Dataset_S6_Differentially_expressed_genes_in_G1-G8_REST Rummagene Transcription Factor Associations 2026 1.0 null NACAD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.85549 midline nuclear complex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.76046 MFSD14A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.41678 MMS22L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25164 GTEX-XMD1-0011-R1A-SM-4AT4C GTEx Tissue Sample Gene Expression Profiles 1.0 1.2421 TELO2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8273 GSE124410_3_v_5_stk40_mouse RummaGEO Gene Perturbation Signatures 1.0 null Seminal vesicle fluid TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.628 GTEX-XMD1-0526-SM-4AT4Z GTEx Tissue Sample Gene Expression Profiles 1.0 0.878807 CCNYL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.34759 SCOC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.30805 NFATC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.42083 SLC37A4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82539 SLC37A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37905 MYO10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.096 POLR2A_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null KPNB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.42233 RRAS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.40371 PPIF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.03001 FIBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.36174 EIF1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.44772 GTEX-R55E-0011-R7A-SM-2TC5Z GTEx Tissue Sample Gene Expression Profiles 1.0 0.897942 mRNA_RHOX6_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells -1.0 null GTEX-QMR6-0011-R2A-SM-32PKV GTEx Tissue Sample Gene Expression Profiles 1.0 1.44717 PMC11031761-mmc2.pdf-3-ZFPM2_ZFPM2 Rummagene Transcription Factor Associations 2026 1.0 null OTP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.14817 Posterior hypothalamic nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44199 H3K4me1_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GSE197555_0_v_2_trametinib_human RummaGEO Drug Perturbation Signatures -1.0 null ZNF781 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.87941 MIR221_KD_GDS4054_455_human_MCF7 breast cancer cells (fulvestrant-resistant) GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null ACHE CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76667 H3K27ac_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null UBB_KO_GDS3906_496_mouse_Testis - 28 Days GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null Taenia tecta, dorsal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02882 CXXC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.17286 periventricular stratum of cerebellar vermis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07247 PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-8_MYB Rummagene Transcription Factor Associations 2026 1.0 null mediodorsal nucleus of thalamus_23 yrs_M_12300 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.25086 GTEX-SUCS-0626-SM-32PM5 GTEx Tissue Sample Gene Expression Profiles 1.0 0.831948 496100416_FWM_dementia_TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.3609 superficial stratum of r1BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25946 PTPN13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.98953 periventricular stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.69606 TMEM43 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.28682 GTEX-QVJO-0011-R1A-SM-2S1QI GTEx Tissue Sample Gene Expression Profiles 1.0 1.14464 GSE224556,GSE224557_6_v_1_aire_mouse RummaGEO Gene Perturbation Signatures 1.0 null PACS2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.06337 ZNF398 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13524 GSE140322_3_v_1_imatinib_human RummaGEO Drug Perturbation Signatures 1.0 null interstitial nucleus of Cajal, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.58321 IZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.872396 GSE128634,GSE128636_4_v_0_foxo1_human RummaGEO Gene Perturbation Signatures 1.0 null Dlx3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 18.2428 PANC0327 DepMap CRISPR Gene Dependency 1.0 3.74775 layer 2 of AOV cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.28152 testis BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 2.09859 GMFB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.33041 HDHD5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.64611 ELN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.24352 ZNF410 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.1433 TAF8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.33434 AN3-CA COSMIC Cell Line Gene Mutation Profiles 1.0 null Rhomboid nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.19062 PMC9170821-JCMM-26-3183-s001.xlsx-Oligo_DAPI_ERG_VaDadj_vs_NC-Gene_ERG Rummagene Transcription Factor Associations 2026 1.0 null r1 part of lateral pontine nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.25946 RTN4RL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.36192 C15orf40 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.13896 SPARC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43192 Systemic lupus erythematosus GWAS Catalog SNP-Phenotype Associations 2025 1.0 0.622185 GSE135350_3_v_5_dexamethasone_human RummaGEO Drug Perturbation Signatures 1.0 null primary auditory cortex (core)_21 yrs_F_13057 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.837348 TPBG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.59531 Crus II, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.997715 HTATSF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08915 FOXL1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 31.2552 POU1F1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.8937 SRY JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.5357 GTEX-V955-1926-SM-4KL1L GTEx Tissue Sample Gene Expression Profiles 1.0 1.50989 CEPT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12015 BCLAF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48427 ZNF709 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53344 SNU620 DepMap CRISPR Gene Dependency 1.0 8.93939 EW-3 COSMIC Cell Line Gene Mutation Profiles 1.0 null superficial stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.7174 LAMC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.59931 ARL8A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.53148 H3K27ac_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GSE205976,GSE205978_2_v_4_cep83_human RummaGEO Gene Perturbation Signatures 1.0 null GSE211989_0_v_1_nlrc3_mouse RummaGEO Gene Perturbation Signatures 1.0 null VZ in septal region Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.31504 pancreas GTEx Tissue Gene Expression Profiles -1.0 -0.947888 GTEX-N7MS-0011-R2a-SM-2HML6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.37992 GTEX-T5JC-0011-R9A-SM-32PLV GTEx Tissue Sample Gene Expression Profiles 1.0 1.72758 testis_7e HPA Tissue Sample Gene Expression Profiles 1.0 1.87287 C9orf78 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0238 GTEX-TKQ2-1526-SM-4DXUN GTEx Tissue Sample Gene Expression Profiles 1.0 1.93138 layer 2 of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11631 POLR2A_heart_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-10_MYB Rummagene Transcription Factor Associations 2026 1.0 null GSE151612_4_v_7_pracinostat_human RummaGEO Drug Perturbation Signatures 1.0 null SLC8B1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.71178 PDCD7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.14861 GTEX-TKQ1-0926-SM-4DXU2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.61538 KLF14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.86836 GTEX-QVJO-0011-R9A-SM-2S1QH GTEx Tissue Sample Gene Expression Profiles 1.0 1.27591 GTEX-S95S-1126-SM-4B64E GTEx Tissue Sample Gene Expression Profiles 1.0 1.57516 SPI1-26923725-CHIP-SEQ-MACROPHAGESS-MOUSE ChEA Transcription Factor Targets 2022 1.0 null GTEX-QDT8-0011-R10A-SM-32PKG GTEx Tissue Sample Gene Expression Profiles 1.0 0.893301 Azoospermia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.02 USP54 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.18432 Vermal regions Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.05 Olig2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 21.8537 HIPK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.77327 POLR2A_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-U8XE-0126-SM-4E3I3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.68277 Bipolar Disorder_frontal cortex_GSE5389 GEO Signatures of Differentially Expressed Genes for Diseases 1.0 2.50076 ZSCAN21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.72328 496100543_FWM_probable Alzheimer's disease_TBI_78_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.39959 WBP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.47311 r8 part of inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.86505 GSE157609,GSE158123_0_v_1_ifi16_human RummaGEO Gene Perturbation Signatures -1.0 null outer CP in temporal polar cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.983354 POLR2A_bone marrow macrophage_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null PML CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.51169 r9 part of the inferior olive Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.9305 PRRX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.246 FLI1::FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.6419 CAPN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.74154 496100651_FWM_probable Alzheimer's disease_TBI_83_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.25594 SCO2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.40257 PDCL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.42721 HNF3A MotifMap Predicted Transcription Factor Targets 1.0 null CDKN2AIPNL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.51918 GSE216273,GSE216292_0_v_7_palbociclib_human RummaGEO Drug Perturbation Signatures -1.0 null fastigial nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 2.4013 TMEM92 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7817 TFCP2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.5788 ACADVL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13444 cell part LOCATE Predicted Protein Localization Annotations 1.0 null intermediate stratum of SeStr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.21702 SW962 COSMIC Cell Line Gene Mutation Profiles 1.0 null KYAE-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null LAN2 DepMap CRISPR Gene Dependency 1.0 2.0753 testis_7a HPA Tissue Sample Gene Expression Profiles 1.0 1.73915 ventrolateral prefrontal cortex_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.04375 GTEX-QVJO-0011-R2A-SM-2S1QK GTEx Tissue Sample Gene Expression Profiles 1.0 1.02467 VPS33B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.03458 GTEX-XPVG-2226-SM-4B65U GTEx Tissue Sample Gene Expression Profiles 1.0 1.22804 periventricular stratum of r2Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2796 SPIC JASPAR Predicted Human Transcription Factor Targets 2025 1.0 44.5536 septopallidal shell area Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.34102 DKKL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.93193 SP in midinferior temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.06273 MIEN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.89397 JPH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26684 SNU-81 COSMIC Cell Line Gene Mutation Profiles 1.0 null GSE213228_1_v_5_irak2_human RummaGEO Gene Perturbation Signatures 1.0 null PMC10614035-2022_281869_LUTGE_SUPPL_TABLES4.xlsx-TP53-Symbol_TP53 Rummagene Transcription Factor Associations 2026 1.0 null striatum_40 yrs_F_12304 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.71107 SLC5A2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15307 H3K4me3_kidney_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null caudal prosubiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.08222 Lhx3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 30.7 RANGAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.36075 brain HPA Tissue Gene Expression Profiles 1.0 0.990375 PROX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.6782 EPB41 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53089 H3K4me1_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XQ3S-2726-SM-4BOP2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.65364 primary auditory cortex (core)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.31787 CMTR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.52999 CDR2L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.43382 PMC4407272-elife06857s002.xlsx-501M_BRG1-MITF_ComUP-List-Gene_name_MITF Rummagene Transcription Factor Associations 2026 1.0 null STK24 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.53897 LNZ308 CCLE Cell Line Gene Expression Profiles -1.0 -1.79062 ventral part of CoP Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2565 MOB3C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22942 MAZ ENCODE Transcription Factor Targets 1.0 null Anterior olfactory nucleus, posteroventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07441 Uvula (IX), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.23857 GSE211989_3_v_2_nlrc3_mouse RummaGEO Gene Perturbation Signatures -1.0 null BCL2L10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84519 FKBP5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67159 TRAM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.69222 HIV-1_LAI_12Hour-UV_treatment_None_GSE56484 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -2.58872 SLC4A7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05895 GTEX-QVJO-0011-R5A-SM-2S1QM GTEx Tissue Sample Gene Expression Profiles 1.0 0.94829 fallopiantube_8e HPA Tissue Sample Gene Expression Profiles 1.0 0.984181 ACADSB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.22839 PCI-30 COSMIC Cell Line Gene Mutation Profiles 1.0 null NCIH226 DepMap CRISPR Gene Dependency 1.0 2.40957 CPNE2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.46492 PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-gene_id_y_CENPX Rummagene Transcription Factor Associations 2026 1.0 null primary visual cortex (striate cortex, area V1/17)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.01342 PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-gene_id_x_CENPX Rummagene Transcription Factor Associations 2026 1.0 null dorsal lateral geniculate nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.12048 TUG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.06769 superficial stratum of SeDg Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.24487 GTEX-WWYW-0011-R5A-SM-3NB3E GTEx Tissue Sample Gene Expression Profiles 1.0 0.940613 SLU7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.10788 frontal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -3.18067 periventricular stratum of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.32828 GTEX-PWO3-0011-R2A-SM-2S1OX GTEx Tissue Sample Gene Expression Profiles 1.0 1.13443 CREG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.56124 PMC8104016-hcg-12-e002353-s010.xlsx-mTHP1-LPS_30kb-Interacting_Gene_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null TARBP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.77044 primary visual cortex (striate cortex, area V1/17)_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.57958 PINK1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46246 periventricular stratum of r3Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.87804 Fundus of striatum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13392 GSE213228_1_v_0_irak2_human RummaGEO Gene Perturbation Signatures 1.0 null supraoptic nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.907009 H3K4me3_placenta_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-QEL4-0826-SM-3GAF2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.851924 mantle zone of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.82024 GTEX-OIZH-2126-SM-3NB1P GTEx Tissue Sample Gene Expression Profiles 1.0 1.76171 SIN3A ENCODE Transcription Factor Targets 1.0 null GSE148066,GSE157787_5_v_10_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null NURR1 MotifMap Predicted Transcription Factor Targets 1.0 null H3K4me3_CH12.LX_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null NDUFAF4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30425 SMARCC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.32716 PHF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.97368 ANKRD13B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.63959 PMC10169359-13058_2023_1653_MOESM1_ESM.xlsx-Table_S9-Table_S9_Genes_differentially_expressed_between_TP53_mutant_and_wild-type_pBCs_TP53 Rummagene Transcription Factor Associations 2026 1.0 null MFSD2A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.93614 DCAF12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02689 STXBP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.6609 mantle zone of AOV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44728 SRF-21415370-HL-1-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null SPRYD4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43304 SLX9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.39191 CXCL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44312 testis_7f HPA Tissue Sample Gene Expression Profiles 1.0 1.33879 H3K4me3_megakaryocyte_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null GTEX-N7MS-0011-R8a-SM-2YUMK GTEx Tissue Sample Gene Expression Profiles 1.0 1.35168 YJEFN3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.32478 inner CP in ventromedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.852471 posteroventral (inferior) parietal cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.36258 ZNF143 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.1409 navicular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.54291 GTEX-OXRO-0011-R9A-SM-3NB1X GTEx Tissue Sample Gene Expression Profiles 1.0 1.39983 mitochondrion LOCATE Predicted Protein Localization Annotations 1.0 null RAX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12917 USO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.08927 GTEX-T8EM-0126-SM-4DM5R GTEx Tissue Sample Gene Expression Profiles 1.0 1.67673 Granular lamina of the cochlear nuclei Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.08848 GSE210101,GSE210114_7_v_3_urod_human RummaGEO Gene Perturbation Signatures 1.0 null Polycythemia DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.405 temporal pole, right, inferior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.933327 Islands of Calleja Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1115 TRAF6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.32787 mantle zone of SePal Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.2579 H3K4me3_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null UMRC2 CCLE Cell Line Gene Expression Profiles -1.0 -1.73523 ENTR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.96479 HOXC13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.97333 GTEX-XYKS-0526-SM-4BRW2 GTEx Tissue Sample Gene Expression Profiles 1.0 0.843606 anterior pretectal nucleus, dorsal superficial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02856 GSE239844_11_v_10_crizotinib_human RummaGEO Drug Perturbation Signatures -1.0 null H3K4me1_brown adipose tissue_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SEC22C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.14506 ZNF143 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.53936 NES CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.40166 GSE63048_11_v_12_morc1_mouse RummaGEO Gene Perturbation Signatures 1.0 null BRAT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25229 cuneate nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.929108 GSE118794_0_v_4_zmynd8_mouse RummaGEO Gene Perturbation Signatures -1.0 null skeletalmuscle BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 1.06147 BMI1-23680149-NPCS-MOUSE ChEA Transcription Factor Targets 2022 1.0 null caudal division of IPC (area 39) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.899257 FANCD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49942 SNU626 CCLE Cell Line Gene Expression Profiles -1.0 -2.37018 superficial stratum of m1AL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02625 anterior (rostral) cingulate (medial prefrontal) cortex_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.20537 GSE179974_3_v_4_carboplatin_mouse RummaGEO Drug Perturbation Signatures 1.0 null ZNF384 ENCODE Transcription Factor Targets 1.0 null ZNF175 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.4519 U937 CCLE Cell Line Gene Expression Profiles 1.0 1.86053 SPDYE3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.32 NFYA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.68629 PMC10614035-2022_281869_LUTGE_SUPPL_TABLES4.xlsx-TP53-ID_TP53 Rummagene Transcription Factor Associations 2026 1.0 null BRPF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44622 GAS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31537 GSE148066,GSE157787_3_v_4_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null GTEX-Q2AG-2826-SM-2HMJQ GTEx Tissue Sample Gene Expression Profiles 1.0 0.921509 SYT12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.97421 STRN4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87622 MYC-19915707-AK7-human ChEA Transcription Factor Binding Site Profiles 1.0 null SMARCA5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.76496 superficial stratum of r6Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -3.02463 GTEX-XBEC-0126-SM-4GIDT GTEx Tissue Sample Gene Expression Profiles 1.0 1.62356 EEF1AKMT3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.88869 RMC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48836 TMEM138 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.18894 GSE254649_3_v_1_cstf2_human RummaGEO Gene Perturbation Signatures 1.0 null GTEX-NPJ7-2726-SM-2I3FT GTEx Tissue Sample Gene Expression Profiles 1.0 0.915773 LP-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null superficial stratum of r3Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16492 LYAR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.12675 GTEX-RU72-0011-R6A-SM-2TF71 GTEx Tissue Sample Gene Expression Profiles 1.0 0.855651 ENO3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.51692 496100317_FWM_no dementia_no TBI_81_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.56924 VIIB, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.975395 NCIH526 CCLE Cell Line Gene Expression Profiles -1.0 -1.53085 H4C4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.30562 BCL11B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.02641 orbital frontal cortex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.22498 MRPS12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.65389 Neuro D MotifMap Predicted Transcription Factor Targets 1.0 null WARS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7417 GTEX-R55D-0126-SM-48FEL GTEx Tissue Sample Gene Expression Profiles 1.0 1.47493 POLR2A ENCODE Transcription Factor Targets 1.0 null Folium-tuber vermis (VII), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.30311 RNF122 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.01127 Perturb_700_KO_INTS6_SRP299234 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 -17.6946 GSE213228_4_v_5_irak2_human RummaGEO Gene Perturbation Signatures 1.0 null PLPPR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76099 PMC10915192-ab-23-0304-Supplementary-Table-S7.pdf-22-CENPS_CENPS Rummagene Transcription Factor Associations 2026 1.0 null superficial stratum of r9BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.63566 CFAP97 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.43278 ZNF770 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 47.4314 emboliform nucleus, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.4479 HT144 DepMap CRISPR Gene Dependency 1.0 2.23123 KAT6A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.94019 H3K4me3_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-X4XX-0011-R2A-SM-3P623 GTEx Tissue Sample Gene Expression Profiles 1.0 2.45145 laterorostral part of entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.86977 icSARS CoV_30Hour_None_GSE37827 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.50025 Primary somatosensory area, lower limb, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.25915 ZIM3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 50.7627 496100346_FWM_no dementia_TBI_81_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.17337 OXSR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.83604 olfactory tubercle Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.03444 CLK4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92089 LARS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.04288 HMG20A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.64166 brain_3c HPA Tissue Sample Gene Expression Profiles 1.0 0.882326 HEXD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26687 HMMR CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4249 496100484_FWM_no dementia_no TBI_86_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.83285 NCI-SNU-1 COSMIC Cell Line Gene Mutation Profiles 1.0 null FAM199X CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.16893 CTRL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56373 TMCO3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.18341 Pyramus (VIII) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.61125 NCI-H358 COSMIC Cell Line Gene Mutation Profiles 1.0 null medial trapezoid nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03063 RPL11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87616 V, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.26782 MIS12/MIND type complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.981 GSE95077_1_v_4_amiloride_human RummaGEO Drug Perturbation Signatures 1.0 null Cortical amygdalar area, posterior part, lateral zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.77877 GTEX-QMR6-0011-R4A-SM-32PKU GTEx Tissue Sample Gene Expression Profiles 1.0 1.05923 CCAR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31643 USP13 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.52277 TMBIM4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82525 r5 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.18518 GTEX-PVOW-2626-SM-32PL8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.864896 RASSF7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75948 CW-2 COSMIC Cell Line Gene Mutation Profiles 1.0 null H3K4me3_heart_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ZNF774 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.72773 H3K4me1_embryonic fibroblast_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null mRNA_CBX8_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-S341-0326-SM-2XCAU GTEx Tissue Sample Gene Expression Profiles 1.0 0.966184 CISH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75015 AP1G1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.70495 ANP32A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.80614 LHX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.84531 H3K4me1_bone marrow_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-NPJ7-0011-R8a-SM-2I3G2 GTEx Tissue Sample Gene Expression Profiles 1.0 1.05484 MXI1_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null FIBIN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.27535 FAM234B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.00863 anterior olfactory area, ventral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.44786 ZXDB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.3922 HCC70 DepMap CRISPR Gene Dependency 1.0 5.9971 GTEX-REY6-0126-SM-48FDT GTEx Tissue Sample Gene Expression Profiles 1.0 2.09028 PPP1R35 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82052 GSE179974_3_v_5_carboplatin_mouse RummaGEO Drug Perturbation Signatures 1.0 null r6 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.81469 GTEX-U8T8-1126-SM-4DXUE GTEx Tissue Sample Gene Expression Profiles 1.0 1.742 TEF-1 MotifMap Predicted Transcription Factor Targets 1.0 null outer CP in caudal perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.34292 MED21 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.80863 496100455_FWM_dementia_TBI_86_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.80159 LIMA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.24428 DAPK3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.95344 THG1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.6565 Type IV secretion system complex COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 1.0 0.769 EB-3 COSMIC Cell Line Gene Mutation Profiles 1.0 null ENTPD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4305 r7 part of paragigantocellular nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.3284 LMNB2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30883 PMC7592539-12885_2020_7456_MOESM4_ESM.xlsx-Sup_TableS3_LMS_del_genes_conf-13q34_1_TP63 Rummagene Transcription Factor Associations 2026 1.0 null ventrolateral prefrontal cortex_8 yrs_M_12981 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.88647 cardiovascular system disease GWASdb SNP-Disease Associations 1.0 1.05435 RREB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.58295 ODAD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.86476 amygdaloid complex_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.88647 posterior (caudal) superior temporal cortex (area 22c)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.30068 nih 3T3 BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.39545 MAP3K14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.45406 not applicable_asthma_GSE43696_369_mouse_bronchial epithelial cell GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null SKIL CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47115 GTEX-XBED-2026-SM-4AT5D GTEx Tissue Sample Gene Expression Profiles 1.0 1.52996 AFF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30355 PHTF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74737 DPH3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.94262 PLEKHG2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.57965 Uvula (IX), molecular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0976 H3K4me1_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null Accessory olfactory bulb, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.79199 H3K27me3_brain_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null testis_4a HPA Tissue Sample Gene Expression Profiles 1.0 1.14218 DHRS4L2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.3019 DHTKD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67471 MFE-319 COSMIC Cell Line Gene Mutation Profiles 1.0 null VENTX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.32188 496100562_FWM_no dementia_TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.53653 GSE88819_6_v_10_tug1_mouse RummaGEO Gene Perturbation Signatures 1.0 null BBS7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79642 GSE149035_3_v_5_hepacam_human RummaGEO Gene Perturbation Signatures -1.0 null DHX40 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.0255 PAQR4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.31784 r11 part of spinal trigeminal nucleus, caudal part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13796 disease GWASdb SNP-Disease Associations 1.0 0.033426 BV-2 cell TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 1.002 Ovary adenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.13 ANP32D CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.11712 HNRNPUL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.99017 MAP1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92043 FOXJ2::ELF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 33.5033 GSE146156_1_v_3_tagap_mouse RummaGEO Gene Perturbation Signatures 1.0 null CHN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.40991 ZFP28 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79605 TBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.747 BMI1-23680149-NPCS-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null H3K27ac_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null C12orf4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54344 HUH7 CCLE Cell Line Gene Expression Profiles 1.0 1.64103 GTEX-QMR6-0011-R7A-SM-32PKL GTEx Tissue Sample Gene Expression Profiles 1.0 1.12755 GTEX-WH7G-1926-SM-4LVMM GTEx Tissue Sample Gene Expression Profiles 1.0 1.60691 COLO668 CCLE Cell Line Gene Expression Profiles 1.0 2.10826 PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-3_MYB Rummagene Transcription Factor Associations 2026 1.0 null GTEX-Q2AG-0011-R8A-SM-2HMK5 GTEx Tissue Sample Gene Expression Profiles 1.0 1.01089 GTEX-U3ZM-1626-SM-4DXSK GTEx Tissue Sample Gene Expression Profiles 1.0 1.36825 MYBL1_KO_GDS4485_350_mouse_Testis from 17 day old GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null H3K9ac_MEL cell line_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null HT1376 DepMap CRISPR Gene Dependency 1.0 4.33518 RINT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.90885 GSE225901_2_v_3_dexamethasone_human RummaGEO Drug Perturbation Signatures -1.0 null EMC8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.6493 TSEN34 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25849 DHRS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45432 GSE254649_3_v_0_cstf2_human RummaGEO Gene Perturbation Signatures 1.0 null atrial fibrillation GAD Gene-Disease Associations 1.0 null DGKD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.0668 inner CP in lateral temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.988914 LAPTM4B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.57302 H3K4me3_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GTEX-XQ3S-1726-SM-4BOOD GTEx Tissue Sample Gene Expression Profiles 1.0 0.913915 GTEX-WZTO-0011-R8A-SM-4E3II GTEx Tissue Sample Gene Expression Profiles 1.0 0.982337 NEDD8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.42472 testis_7d HPA Tissue Sample Gene Expression Profiles 1.0 1.72976 MARCKSL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25775 embryonic stem no feeder BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.08696 R3HDM2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54425 SNB75 DepMap CRISPR Gene Dependency 1.0 2.62978 SLFN5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.22435 B3GNT8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.56531 amygdaloid complex_11 yrs_F_12289 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.33843 GTEX-QDT8-0011-R2A-SM-32PKQ GTEx Tissue Sample Gene Expression Profiles 1.0 1.17972 superficial stratum of PcPL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.02856 GTEX-N7MS-0126-SM-3TW8O GTEx Tissue Sample Gene Expression Profiles 1.0 1.88458 ZNF214 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 30.3177 SYNGR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.57479 LONRF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31427 SEC24B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76127 Declive (VI), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.70547 VPS52 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0079 GTEX-W5X1-0526-SM-3GILH GTEx Tissue Sample Gene Expression Profiles 1.0 0.930149 POU2AF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76001 POLR1H CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22536 ACD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7402 anterior (rostral) cingulate (medial prefrontal) cortex_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.885344 KCNA5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.93312 DND41 CCLE Cell Line Gene Expression Profiles 1.0 1.47395 ZNF488 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.80461 JVM3 CCLE Cell Line Gene Expression Profiles -1.0 -1.83827 OB glomerular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02517 TRAPPC6A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.37116 INSIG1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9587 Atrial Fibrillation dbGAP Gene-Trait Associations 1.0 0.361187 PCBP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.18114 periventricular stratum of r2BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16409 BT20 CCLE Cell Line Gene Expression Profiles -1.0 -1.7555 adrenal gland GTEx Tissue Gene Expression Profiles 1.0 0.968954 MRPL52 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.06382 PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Combined-MYB_Combined_sgRNA_MYB Rummagene Transcription Factor Associations 2026 1.0 null intermediate stratum of PHyB-V Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.51683 DUS3L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.20478 ANAPC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.33777 r9 portion of vagal motor nucleus (postmigratory) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03477 LPCAT4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.95875 H3K4me1_ES-E14_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null PLAGL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0719 CNBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.10236 GTEX-XMK1-2026-SM-4B65K GTEx Tissue Sample Gene Expression Profiles 1.0 1.6961 GCA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.88654 H3K4me3_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null NPAS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.21727 H3K4me3_erythroblast_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null PMC6694122-41467_2019_11591_MOESM7_ESM.xlsx-a_GATA2_R361_Subclone_4_DEGs-SubGene_GATA2 Rummagene Transcription Factor Associations 2026 1.0 null 496100362_FWM_no dementia_no TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.45014 IV, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.2198 PRPF39 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9343 FBXO22 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.6793 DPYSL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.61494 PLS3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8463 BPNT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.41423 POU4F2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 35.121 GSE210655_3_v_0_cisplatin_mouse RummaGEO Drug Perturbation Signatures -1.0 null GSE162688_1_v_2_pink1_mouse RummaGEO Gene Perturbation Signatures -1.0 null PDZD9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8817 PMC6694122-41467_2019_11591_MOESM7_ESM.xlsx-c_GATA2_R361_whole_sample_DEGs-Gene_GATA2 Rummagene Transcription Factor Associations 2026 1.0 null cerebellar cortex_3 yrs_M_12980 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.900784 MAFK ENCODE Transcription Factor Targets 1.0 null CHRD CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.84434 reuniens nucleus, main part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.20479 CEBPA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 20.1975 SOX18 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.612 anterior hypothalamic area, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.03613 GTEX-S7SE-0011-R6A-SM-2XCD9 GTEx Tissue Sample Gene Expression Profiles 1.0 0.892696 ZSWIM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41537 DDX59 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48564 NR4A2::RXRA JASPAR Predicted Human Transcription Factor Targets 2025 1.0 22.1866 GSE216043_10_v_9_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null STAT6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29934 GNPDA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.57553 IKZF2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.63752 GTPBP8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.21053 RBMY1A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.091 Primary somatosensory area, lower limb Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.73819 GTEX-PLZ5-1526-SM-3P5ZX GTEx Tissue Sample Gene Expression Profiles 1.0 1.0631 LIPA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34675 GNB3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.93607 POLR2A_cortical plate_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null COLO205 DepMap CRISPR Gene Dependency 1.0 4.0639 GTEX-X4XX-0011-R4B-SM-46MWL GTEx Tissue Sample Gene Expression Profiles 1.0 1.16978 NUDT11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.27309 GHDC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8236 TGFB1I1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.33031 ANXA5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05329 RAF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.17238 P2RX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.83389 IKZF1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.0564 Nucleus of the solitary tract, gelatinous part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.22822 ANKRD49 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84696 Chronic fatigue syndrome DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.229 Lung TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 1.0 1.069 H3K27me3_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null mantle zone of cerebellar vermis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07871 CCK-81 COSMIC Cell Line Gene Mutation Profiles 1.0 null GSE108675_3_v_0_slc1a4_mouse RummaGEO Gene Perturbation Signatures 1.0 null RERFGC1B DepMap CRISPR Gene Dependency 1.0 3.17047 CMTM6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67707 inferior olive, principal nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.2215 disease of anatomical entity DISEASES Experimental Gene-Disease Association Evidence Scores 1.0 0.100789 PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-2_MYB Rummagene Transcription Factor Associations 2026 1.0 null H3K9ac_ES-Bruce4_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null B4GALT6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.74072 H3K27ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null deep layers of rostral entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.936323 NCI-H740 COSMIC Cell Line Gene Mutation Profiles 1.0 null inferolateral temporal cortex (area TEv, area 20)_13 yrs_F_12831 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.904531 GTEX-SNMC-1026-SM-4DM7K GTEx Tissue Sample Gene Expression Profiles 1.0 1.76251 ANKRD9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.34717 GSE207611,GSE207612_3_v_2_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null FAM174C CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46042 GTEX-Q734-0126-SM-48U1E GTEx Tissue Sample Gene Expression Profiles 1.0 0.836034 subgranular zone of rostral dentate gyrus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.21964 KDM1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.10054 Arid3a JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.3333 GSE128054_1_v_0_myt1_human RummaGEO Gene Perturbation Signatures -1.0 null GTEX-N7MT-0011-R10A-SM-2I3E1 GTEx Tissue Sample Gene Expression Profiles 1.0 0.859469 UBE3A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.28077 SNU-1040 COSMIC Cell Line Gene Mutation Profiles 1.0 null STAT5B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.28107 DM3 CCLE Cell Line Gene Expression Profiles -1.0 -3.3509 HOXA10 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 28.0014 SLC31A1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.70004 496100409_FWM_no dementia_TBI_85_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.07876 SLC25A11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67744 Entorhinal area, medial part, ventral zone, layer 1 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.40287 outer SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.15631 periventricular stratum of r5Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.18518 GTEX-RU72-0011-R9A-SM-2TF67 GTEx Tissue Sample Gene Expression Profiles 1.0 1.22243 SLC4A1AP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.99603 GSE186483_1_v_4_lrrk2_mouse RummaGEO Gene Perturbation Signatures 1.0 null LYPD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.63665 PAFAH1B1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79393 VZ in caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.995058 SUPT1 CCLE Cell Line Gene Expression Profiles 1.0 1.44237 GTEX-N7MT-0011-R2a-SM-2I3GI GTEx Tissue Sample Gene Expression Profiles 1.0 1.90063 mRNA_MEF2C_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.54783 r4 part of cochlear sensory column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.38207 SOX5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.39358 TLX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76489 pancreas HPA Tissue Gene Expression Profiles -1.0 -1.01791 SPI1-20176806-THIOMACROPHAGE-MOUSE ChEA Transcription Factor Targets 2022 1.0 null GTEX-U3ZH-0526-SM-3DB75 GTEx Tissue Sample Gene Expression Profiles 1.0 0.89029 interstitial nucleus of Cajal, left Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.96342 E2F2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.55058 GAPDH CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.39396 PRDM15 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.5303 outer SZ in posteror frontal cortex (motor cortex) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.871607 PIK3C2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.1175 HSPH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48875 Medial preoptic nucleus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01789 GYPC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.32851 NUP42 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.60224 KNSTRN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87021 YDJC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.2559 GSE186483_6_v_4_lrrk2_mouse RummaGEO Gene Perturbation Signatures 1.0 null intermediate stratum of JcPV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15752 amygdaloid complex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.46649 Agranular insular area, dorsal part, layer 2/3 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.05145 ZNF253 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75306 Central nervous system TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 BCL6 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.0157 GTEX-T6MN-0011-R8A-SM-32QP3 GTEx Tissue Sample Gene Expression Profiles 1.0 1.31572 PMC7592539-12885_2020_7456_MOESM4_ESM.xlsx-Sup_TableS3_LMS_del_genes_conf-13q34_TP63 Rummagene Transcription Factor Associations 2026 1.0 null NCIH1993 DepMap CRISPR Gene Dependency 1.0 9.57461 Alx1 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 18.0394 mantle zone of InsCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04305 HOXD9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 24.2732 Gli2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 32.886 GTEX-NL4W-0011-R2a-SM-2I5GV GTEx Tissue Sample Gene Expression Profiles 1.0 1.17096 FSBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.95183 ADGRG5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.79734 PPM1H CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.10205 INAVA CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.80292 GSE216043_11_v_6_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null lateral hypothalamic area, anterior region, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.98939 superficial stratum of r3Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.50614 T-T COSMIC Cell Line Gene Mutation Profiles 1.0 null heart GTEx Tissue Gene Expression Profiles -1.0 -0.854489 FOXP2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 19.4543 Anteromedial visual area, layer 5 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.30611 Mediodorsal nucleus of the thalamus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.03839 stat3_18070348_alveolar_type_2_epithelial_lof_mouse_gpl1261_gds3106 GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations 1.0 0.028425 ZNF28 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34705 VZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.993569 mantle zone of AOB Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16904 H2BC8 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.10194 dorsal cortical nucleus of inferior colliculus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.56918 RTEL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54546 496100277_FWM_no dementia_no TBI_90-94_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.59114 ARID1B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92579 posteromedial visual area, layer 4 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.0354 ARF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.83908 GTEX-R55E-0011-R9A-SM-2TC6C GTEx Tissue Sample Gene Expression Profiles 1.0 1.56618 SAT COSMIC Cell Line Gene Mutation Profiles 1.0 null TUHR4TKB DepMap CRISPR Gene Dependency 1.0 2.69014 VRK3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68677 GTEX-VJYA-1426-SM-4KL1Y GTEx Tissue Sample Gene Expression Profiles 1.0 1.26916 icSARS-Cov_Day4_None_GSE50000 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 1.7934 r10 part of external cuneate nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.41581 Pyramus (VIII), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.70684 FBXO3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.16476 FOXK1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.7803 H3K4me3_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null TRPM7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.84564 LBP-1 MotifMap Predicted Transcription Factor Targets 1.0 null H3K4me1_liver_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null GSE114284_2_v_0_irf1_human RummaGEO Gene Perturbation Signatures -1.0 null MUS81 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.12809 GTEX-XOTO-0011-R8A-SM-4B65J GTEx Tissue Sample Gene Expression Profiles 1.0 0.944197 inner CP in subgenual (subcallosal) cingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.60398 GTEX-S7SE-0326-SM-4AT5Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.5789 TXK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41458 GSE132759_4_v_2_fgfr1_mouse RummaGEO Gene Perturbation Signatures 1.0 null TFPI2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56228 FANCM CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44863 ASB6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.43285 RUNX1 ChEA Transcription Factor Targets 1.0 null GTEX-RWSA-2426-SM-47JXR GTEx Tissue Sample Gene Expression Profiles 1.0 1.55726 A-VN-1203-2004(H5N1)_Day2-10^3pfu_22074594_GSE33263 GEO Signatures of Differentially Expressed Genes for Viral Infections -1.0 -1.76303 TTC9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.43999 GTEX-WWYW-0011-R7A-SM-3NB3H GTEx Tissue Sample Gene Expression Profiles 1.0 0.958588 GSE218060_2_v_4_decitabine_human RummaGEO Drug Perturbation Signatures 1.0 null GTEX-Q2AG-0011-R7A-SM-2HMJP GTEx Tissue Sample Gene Expression Profiles 1.0 0.997077 dorsolateral prefrontal cortex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.35026 GSE218949_0_v_1_cep20_human RummaGEO Gene Perturbation Signatures -1.0 null cell COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 HNF4, COUP MotifMap Predicted Transcription Factor Targets 1.0 null BCL2L12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.30589 GSE229309,GSE229314_4_v_1_elavl1_human RummaGEO Gene Perturbation Signatures 1.0 null periventricular stratum of r9Lim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03477 ZNF705A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.73682 primary somatosensory cortex (area S1, areas 3,1,2)_13 pcw_M_12820 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.875992 JADE3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -4.95961 H3K4me3_megakaryocyte_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null RNF103 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.09066 COA5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.86185 ZGPAT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.37265 GSE196540,GSE196542_4_v_5_dnmt3a_mouse RummaGEO Gene Perturbation Signatures -1.0 null MRPL19 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.11983 outer SZ in dorsomedial extrastriate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.920169 SELENOV CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8657 MCFD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.82258 Golgi apparatus COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 1.0 1.714 PPFIA4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.66141 EMB CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.18559 frontal pole, right, superior aspect Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.81347 NOXO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.89008 retroreuniens nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.27522 GTEX-PWO3-0011-R6A-SM-2I5F3 GTEx Tissue Sample Gene Expression Profiles 1.0 0.946326 duodenum HPA Tissue Gene Expression Profiles -1.0 -1.01791 DTX2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.02021 NCI-H196 COSMIC Cell Line Gene Mutation Profiles 1.0 null disease DISEASES Experimental Gene-Disease Association Evidence Scores 1.0 0.100789 TAF5L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.03037 r9 part of nucleus gracilis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.71821 GTEX-T6MN-0011-R4A-SM-32QPG GTEx Tissue Sample Gene Expression Profiles 1.0 0.87738 GTEX-QMR6-1926-SM-32PL9 GTEx Tissue Sample Gene Expression Profiles 1.0 0.851155 MTMR1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.79309 DNAJB14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.21288 ERF::FOXI1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.8595 A101D COSMIC Cell Line Gene Mutation Profiles 1.0 null enzalutamide_homo sapiens_gpl570_gse44905 GEO Signatures of Differentially Expressed Genes for Small Molecules -1.0 null SCARB1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.89102 RADX CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.30539 KASUMI6 CCLE Cell Line Gene Expression Profiles 1.0 1.80057 PMC8755441-mmc3.xlsx-IRF7-Up-Symbol_IRF7 Rummagene Transcription Factor Associations 2026 1.0 null F2RL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.09019 LIG3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.29009 GTEX-X585-0011-R4B-SM-46MVH GTEx Tissue Sample Gene Expression Profiles 1.0 1.11281 fallopian tube HPA Tissue Gene Expression Profiles 1.0 1.83613 GSE201657_0_v_1_ash2l_human RummaGEO Gene Perturbation Signatures 1.0 null SLC27A3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.83132 SG in rostral perirhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.36132 CPEB3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.67631 UXT CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.36213 GSE123861_1_v_0_sin3a_human RummaGEO Gene Perturbation Signatures -1.0 null REM2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.14913 SP in midcingulate cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.825206 GR MotifMap Predicted Transcription Factor Targets 1.0 null 496100514_FWM_no dementia_TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.43038 GOLGA8B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80561 PPP1R3F CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.8314 striatum_21 pcw_M_12886 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.0099 NR3C2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.5293 subbrachial nucleus, rostral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.06299 EFNB3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.45684 AVPI1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80393 head and face region of M1 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.951015 OCUM1 CCLE Cell Line Gene Expression Profiles -1.0 -1.85783 GTEX-WZTO-0011-R7B-SM-4E3IS GTEx Tissue Sample Gene Expression Profiles 1.0 0.949066 layer III of caudal entorhinal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.10975 GSE199606_1_v_4_csf2_mouse RummaGEO Gene Perturbation Signatures 1.0 null TBL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.43888 SW1783 CCLE Cell Line Gene Expression Profiles -1.0 -1.53838 ARMC6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.20539 INTS11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.30702 PPA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32475 NPDC1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.87887 Lingula (I), granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.0188 inner SZ in midlateral temporal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.943379 VIIIA, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.995785 Rarg JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 59.5829 organelle COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 POLR2A_limb_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null hippocampus (hippocampal formation)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.45685 interpositus (intermediate) nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.89423 Thap11 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 25.2758 BDH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.98812 GSE179974_3_v_2_carboplatin_mouse RummaGEO Drug Perturbation Signatures 1.0 null GSE206779_1_v_3_angiotensin ii_mouse RummaGEO Drug Perturbation Signatures -1.0 null ZNF805 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.01826 697 COSMIC Cell Line Gene Mutation Profiles 1.0 null NAV2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.76978 GSE183335,GSE183351_1_v_0_lin28b_human RummaGEO Gene Perturbation Signatures -1.0 null CNR_KO_GDS2820_636_mouse_Skin GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null ZBTB37 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34062 RNF19B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.5644 primary auditory cortex (core)_12 pcw_F_13060 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.57331 GSE145990_1_v_5_ibrutinib_human RummaGEO Drug Perturbation Signatures -1.0 null GTEX-XMD1-0011-R9A-SM-4AT49 GTEx Tissue Sample Gene Expression Profiles 1.0 3.16005 GSE216043_10_v_4_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null GTEX-SSA3-0226-SM-32QPN GTEx Tissue Sample Gene Expression Profiles 1.0 0.840703 TCFL5 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 23.9781 ATG16L2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4651 RYBP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.83938 TMEM86B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.51985 T98G DepMap CRISPR Gene Dependency 1.0 2.11247 GSE223008_5_v_1_calhm6_mouse RummaGEO Gene Perturbation Signatures 1.0 null H3K4me3_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null fallopian tube GTEx Tissue Gene Expression Profiles 1.0 0.946009 superficial stratum of InsCx (cortical plate/marginal zone) Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04305 CSNK1D CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.52118 RNA helicase p68_KD_GDS2152_626_mouse_skeletal muscle cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null 496100436_FWM_no dementia_no TBI_95-99_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.91209 PMC5687749-pone.0188272.s005.xlsx-Supplementary_Table_3-Supplementary_Table_3_Differentially_Expressed_Genes_in_Common_between_AFX_compared_to_both_Keratinocytes_and_Fibroblasts_FOXO4 Rummagene Transcription Factor Associations 2026 1.0 null ventrolateral prefrontal cortex_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.97071 ES8 DepMap CRISPR Gene Dependency 1.0 4.94742 Accessory olfactory bulb, glomerular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.57234 superficial stratum of r11Tr Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.13635 inner SZ in primary visual cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.960731 MAFK CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.05193 GTEX-UTHO-0011-R1A-SM-3GIJO GTEx Tissue Sample Gene Expression Profiles 1.0 1.23339 H3K27me3_MEL cell line_mm9_2 ENCODE Transcription Factor Binding Site Profiles 1.0 null GSE190316,GSE190324_1_v_11_rbm4_human RummaGEO Gene Perturbation Signatures -1.0 null COLO320 DepMap CRISPR Gene Dependency 1.0 3.40659 MZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.835573 CP67-MEL COSMIC Cell Line Gene Mutation Profiles 1.0 null MYC ENCODE Transcription Factor Targets 1.0 null PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-9_MYB Rummagene Transcription Factor Associations 2026 1.0 null superficial stratum of r6BL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.39471 GTEX-R55F-0011-R8A-SM-2TF4F GTEx Tissue Sample Gene Expression Profiles 1.0 0.881018 POLR2A_liver_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null ZNF677 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 29.2321 H3K4me3_MEL cell line_mm9_3 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_testis_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null r7 part of the dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.69606 GTEX-PVOW-0011-R3A-SM-32PKX GTEx Tissue Sample Gene Expression Profiles 1.0 1.08116 testis_7b HPA Tissue Sample Gene Expression Profiles 1.0 1.39919 PMC7608835-aba3058_Table_S4.xlsx-EWS-FLI1_RING1B-Genes_containing_RING1B_EWSR1-FLI1_enhancers_FLI1 Rummagene Transcription Factor Associations 2026 1.0 null SZ in medial temporal-occipital cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.18873 MAGEH1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.53317 CALU CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.32929 GSE199606_1_v_4_ricin_mouse RummaGEO Drug Perturbation Signatures 1.0 null central nuclear group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.6439 PMC11925450-elife-96850-supp2.xlsx-DNMT1_KO_vs_DNMT1_L1TD1_dKO_res-Unnamed_0_DNMT1 Rummagene Transcription Factor Associations 2026 1.0 null SERINC5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.92682 Perturb_943_KO_Sftpa1_SRP246320 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -5.51173 Anterior olfactory nucleus, lateral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.16607 WDR90 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.54736 rostral putamen Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.891465 KCNA6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.9602 TDOTT DepMap CRISPR Gene Dependency 1.0 2.2056 PPARG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.83096 Atrial fibrillation GWAS Catalog SNP-Phenotype Associations 1.0 0.085234 CDKN1A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.49067 insular cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.04071 Ovarian serous cystadenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.27 H3K27ac_cortical plate_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null GTEX-SJXC-2026-SM-4DM6N GTEx Tissue Sample Gene Expression Profiles 1.0 0.832515 retrotrapezoid nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.39359 Whole body TISSUES Curated Tissue Protein Expression Evidence Scores 2025 1.0 4.0 GTEX-Q2AI-1226-SM-48U14 GTEx Tissue Sample Gene Expression Profiles 1.0 1.6303 PMEPA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.66341 r3 part of spinal trigeminal sensory column, oral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.16492 GTEX-NPJ8-0011-R3a-SM-2HMIW GTEx Tissue Sample Gene Expression Profiles 1.0 1.22309 cell part COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 DPM2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.65991 ARPC4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.25912 GSE146156_2_v_3_tagap_mouse RummaGEO Gene Perturbation Signatures 1.0 null primary somatosensory cortex (area S1, areas 3,1,2)_18 yrs_M_12984 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.56622 SIDT2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.25938 FZD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56835 STAU1_DELETION_GDS3370_56_human_HeLa GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null intermediate stratum of isLim Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.11002 GTEX-V1D1-2126-SM-4JBH4 GTEx Tissue Sample Gene Expression Profiles 1.0 1.87365 LN319 DepMap CRISPR Gene Dependency 1.0 2.283 SPI1-20176806-THIOMACROPHAGE-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null GTEX-RNOR-0011-R9A-SM-2TF52 GTEx Tissue Sample Gene Expression Profiles 1.0 1.74619 primary auditory cortex (core)_4 mos_M_12889 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.77787 primary auditory cortex (core)_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.37187 Central amygdalar nucleus, medial part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.3424 PROSER2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15998 cognitive disorder GWASdb SNP-Disease Associations 1.0 0.673055 C17orf49 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.23116 intracellular COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 GTEX-XMD1-0011-R8A-SM-4AT48 GTEx Tissue Sample Gene Expression Profiles 1.0 1.28307 ZNF580 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.32673 Crus I, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.873909 MYC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.97165 ADGRL1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.71826 red nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.18944 DDX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.86265 IV, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.07845 SKBR3 DepMap CRISPR Gene Dependency 1.0 2.27196 KNS81 DepMap CRISPR Gene Dependency 1.0 3.43408 ZNF540 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12236 TRIM4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.01051 mantle zone of CoPV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.2565 AOB, granular layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.1815 lateral orbital frontal cortex (area 12/47) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.59581 U118MG CCLE Cell Line Gene Expression Profiles -1.0 -1.68271 TMEM223 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.58894 emboliform nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.67288 cerebellar cortex_10 mos_M_12977 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.69511 PMC6335596-mmc2.xlsx-RNA-seq_Day_3_GATA6_Het-Unnamed_13_GATA6 Rummagene Transcription Factor Associations 2026 1.0 null GLB1L3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.88995 pyramidal layer of caudal subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 0.903719 HTRA1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.64328 RCM1 DepMap CRISPR Gene Dependency 1.0 6.01167 HT-115 COSMIC Cell Line Gene Mutation Profiles 1.0 null PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-1_MYB Rummagene Transcription Factor Associations 2026 1.0 null PLEKHM2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.45228 muscle GTEx Tissue Gene Expression Profiles -1.0 -1.52127 VPS29 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.47563 YAP_OE_GDS3220_32_human_MCF10A GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null ESRRG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.31086 496100596_FWM_dementia_TBI_89_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.26446 ALDH2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.85758 GTEX-OXRL-2126-SM-3NM98 GTEx Tissue Sample Gene Expression Profiles 1.0 2.19719 PROKR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.72705 RHOXF2B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.10149 GSE148066,GSE157787_11_v_10_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null ARID5A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.77137 Perturb_1661_KO_Itgae_SRP158371 PerturbAtlas Signatures of Differentially Expressed Genes for Mouse Gene Perturbations -1.0 -1.54976 CMTM3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.39448 GMEB2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.49397 GSE127261_1_v_2_ezh2_human RummaGEO Gene Perturbation Signatures -1.0 null MAFK_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null pallidal islands of Calleja Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.81461 GORASP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.91938 KDM1A_KD_GDS5055_367_mouse_adipose tissue GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null GTEX-WHSE-0011-R4A-SM-3P5ZN GTEx Tissue Sample Gene Expression Profiles 1.0 0.982685 PMC8635809-Table_2.xls-LPS-upregulated-Unnamed_4_IRF6 Rummagene Transcription Factor Associations 2026 1.0 null GDAP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.38578 GTEX-N7MS-0011-R5a-SM-2HMK8 GTEx Tissue Sample Gene Expression Profiles 1.0 0.926992 intermediate stratum of m1AL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.24679 GTEX-WHSE-0011-R8A-SM-3P5Z1 GTEx Tissue Sample Gene Expression Profiles 1.0 1.07971 PCI30 DepMap CRISPR Gene Dependency 1.0 3.40472 GSE115542_5_v_3_digoxin_human RummaGEO Drug Perturbation Signatures 1.0 null ZNF646 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78416 IFRD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.04157 BANF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75243 interpeduncular nucleus Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.38723 cuneus, right, peristriate Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.54356 GTEX-RVPU-0011-R7A-SM-2XCAB GTEx Tissue Sample Gene Expression Profiles 1.0 1.26098 GTEX-N7MT-0011-R3a-SM-2I3GC GTEx Tissue Sample Gene Expression Profiles 1.0 1.5097 LGR4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.36066 HOMEZ CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.11931 COQ4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.76364 GSE96777,GSE96778_1_v_0_zbtb4_human RummaGEO Gene Perturbation Signatures 1.0 null STAT3_deficiency_GDS3106_58_mouse_type II alveolar cells GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null PARP4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.56103 PLEKHA4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12145 RBM33 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13531 cerebellar cortex_4 mos_M_12296 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.0182 GTEX-QLQW-1026-SM-447A9 GTEx Tissue Sample Gene Expression Profiles 1.0 1.40128 layer 1 of AOV cortex Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.64694 GATC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.57094 PMC6420765-12864_2019_5550_MOESM4_ESM.xlsx-R_D4_vs_D9-Row_names_CENPX Rummagene Transcription Factor Associations 2026 1.0 null AMDHD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.10944 GTEX-T5JC-2126-SM-32PMO GTEx Tissue Sample Gene Expression Profiles 1.0 0.974749 rostral ventral respiratory cell group Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.98348 H3K4me1_olfactory bulb_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null PFDN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.29278 GTEX-WWYW-0011-R1A-SM-3TW8G GTEx Tissue Sample Gene Expression Profiles 1.0 0.851143 RGS14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.97119 NOG CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.7732 liminal reticular formation of m2 Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.31895 H3K27ac_heart_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null Paraganglioma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.15 LDLRAP1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54334 GTEX-NPJ7-0011-R9a-SM-2TC5R GTEx Tissue Sample Gene Expression Profiles 1.0 2.24012 superficial stratum of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.21938 GSE225141,GSE225143_2_v_3_mettl3_mouse RummaGEO Gene Perturbation Signatures -1.0 null GTEX-Q2AH-1526-SM-48TZG GTEx Tissue Sample Gene Expression Profiles 1.0 1.51822 GSE223008_9_v_1_calhm6_mouse RummaGEO Gene Perturbation Signatures 1.0 null OB olfactory fiber layer Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.02973 EN DepMap CRISPR Gene Dependency 1.0 4.34919 PMC6904118-NIHMS1544763-supplement-5.xlsx-MYB_Individual-MYB_sgRNA-5_MYB Rummagene Transcription Factor Associations 2026 1.0 null FBXO31 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.36319 nucleus of the inferior collicular brachium, rostral part Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.09897 GTEX-UTHO-0011-R2A-SM-3GIKC GTEx Tissue Sample Gene Expression Profiles 1.0 1.68002 OSTM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41308 DYNC1LI2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.17983 H3K4me3_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null TMEM63A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31952 mantle zone of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.71425 PMC3889689-elife01439s001.xls-RFX2_rnaseq_chip_DirectDE_final-ENSG_ID_RFX2 Rummagene Transcription Factor Associations 2026 1.0 null H3K9ac_liver_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null superficial stratum of r7BI Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.49297 MRGPRF CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.44295 KATOIII COSMIC Cell Line Gene Mutation Profiles 1.0 null Dlx4 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 18.5985 LRP6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.22642 Ovarian cystadenocarcinoma DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.261 IRF2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.41346 GTEX-WWYW-0011-R8A-SM-3NB3S GTEx Tissue Sample Gene Expression Profiles 1.0 1.20448 ETV2::HOXB13 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.107 striatum_16 pcw_M_12837 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.15857 CITED1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.64327 ROM1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47017 GTEX-QDT8-0011-R8A-SM-32PKE GTEx Tissue Sample Gene Expression Profiles 1.0 1.19884 TBX20 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12984 FOXA1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 16.8385 ZNF577 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.17549 LCLC97TM1 DepMap CRISPR Gene Dependency 1.0 4.18419 EXO1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75232 SMRT-22465074-MACROPHAGES-MOUSE ChEA Transcription Factor Targets 2022 1.0 null CPLANE2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.29269 SRF ChEA Transcription Factor Targets 1.0 null GSE168596_1_v_3_adiponectin_mouse RummaGEO Drug Perturbation Signatures 1.0 null tachycardia GWASdb SNP-Phenotype Associations 1.0 0.919744 DNAJC5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.89372 SLFN14 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.57168 496100352_FWM_no dementia_no TBI_90-94_F Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.70827 SART3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.14623 GTEX-PW2O-1426-SM-48TCD GTEx Tissue Sample Gene Expression Profiles 1.0 1.45609 IZ in caudal midinferior temporal cortex (area TF) Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.41821 mainolfactoryepithelium.MOE. BioGPS Mouse Cell Type and Tissue Gene Expression Profiles -1.0 -1.3245 membrane-bounded organelle COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 GRHL2 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 26.0045 TRIM33_KD_GDS4071_449_human_HMEC-TR mammary epithelial cell line GEO Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 null Shox2 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.9545 GSE174383_6_v_5_ly6d_mouse RummaGEO Gene Perturbation Signatures -1.0 null Seminal plasma TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.953 PKN2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.66674 GSE124410_6_v_0_stk40_mouse RummaGEO Gene Perturbation Signatures 1.0 null PMC4407272-elife06857s002.xlsx-501M_BRG1-MITF_ComUP-List-Ensembl_gene_id_MITF Rummagene Transcription Factor Associations 2026 1.0 null GTEX-X585-0011-R2B-SM-46MVF GTEx Tissue Sample Gene Expression Profiles 1.0 1.0599 Duodenum disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.469 external part of AOV Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 2.34429 GSE207611,GSE207612_0_v_1_cisplatin_human RummaGEO Drug Perturbation Signatures 1.0 null CADOES1 CCLE Cell Line Gene Expression Profiles 1.0 1.74603 TRAF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.12982 VIIIB, left, paravermis Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -0.900969 cerebellar cortex_35 pcw_F_12295 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.62318 GTEX-XMD1-0011-R2B-SM-4AT5N GTEx Tissue Sample Gene Expression Profiles 1.0 1.33662 GSE235701,GSE261434_0_v_1_enasidenib_human RummaGEO Drug Perturbation Signatures 1.0 null medioventral part of putamen Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.77396 SW13 COSMIC Cell Line Gene Mutation Profiles 1.0 null ASH1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.06474 H3K4me2_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null CLDN12 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.26915 Central amygdalar nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.35288 GTEX-Q734-0626-SM-2I3EF GTEx Tissue Sample Gene Expression Profiles 1.0 0.857386 Perturb_10154_KD_ZRSR2_SRP265290 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 3.52247 GTEX-WFON-2026-SM-4LVMW GTEx Tissue Sample Gene Expression Profiles 1.0 1.35692 PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-PKNOX1_PKNOX1 Rummagene Transcription Factor Associations 2026 1.0 null BL2268 (TDP1) NURSA Protein Complexes 1.0 null GSE183994_3_v_0_scml2_mouse RummaGEO Gene Perturbation Signatures 1.0 null GTEX-XLM4-0011-R9A-SM-4AT45 GTEx Tissue Sample Gene Expression Profiles 1.0 1.40186 GSE124410_3_v_0_stk40_mouse RummaGEO Gene Perturbation Signatures 1.0 null TMEM59L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.54809 PMC12498101-cd-24-1904_supplementary_tables_s1-s12_suppst1.xlsx-S7-Supplementary_Table_7_Human_tissue_RNA-seq_differential_analysis_for_SPOPmut_vs_SPOPwt_AA_vs_AG_and_AG_vs_GG_clone_data_DEG_set_TEAD1 Rummagene Transcription Factor Associations 2026 1.0 null KYSE-150 COSMIC Cell Line Gene Mutation Profiles 1.0 null GTEX-R55C-1426-SM-48FED GTEx Tissue Sample Gene Expression Profiles 1.0 1.58575 GSC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.95975 ZSCAN16 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 32.1289 CARD11 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.63588 cardiovascular system disease DISEASES Experimental Gene-Disease Association Evidence Scores 1.0 0.100789 MBOAT1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15992 polymorphic layer of caudal subiculum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 2.15324 r4 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.32274 OCILY3 CCLE Cell Line Gene Expression Profiles 1.0 1.61467 Primary somatosensory area, lower limb, layer 6b Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.10137 HPBALL CCLE Cell Line Gene Expression Profiles 1.0 1.42662 VCAP CCLE Cell Line Gene Expression Profiles 1.0 1.5281 cumulus-oocyte complex TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 1.0 0.691 GSE151612_4_v_2_pracinostat_human RummaGEO Drug Perturbation Signatures 1.0 null ZNF384_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-S7SE-0926-SM-2XCD6 GTEx Tissue Sample Gene Expression Profiles 1.0 0.863707 SKOR2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.13844 H3K27ac_bone marrow macrophage_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null mRNA_MYBL2_19796622 ESCAPE Omics Signatures of Genes and Proteins for Stem Cells 1.0 null GTEX-S32W-1326-SM-4AD5Q GTEx Tissue Sample Gene Expression Profiles 1.0 1.18312 GTEX-OXRO-0011-R2A-SM-3NB1W GTEx Tissue Sample Gene Expression Profiles 1.0 0.959596 SUDS3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.48596 GTEX-NPJ7-0011-R2a-SM-2I3GF GTEx Tissue Sample Gene Expression Profiles 1.0 2.14869 GSE210885_3_v_7_klf4_mouse RummaGEO Gene Perturbation Signatures -1.0 null ZXDC_KD_GDS5070_504_human_U937 GEO Signatures of Differentially Expressed Genes for Gene Perturbations -1.0 null BEX1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34522 DENND4A CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.98396 PIANP CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.17717 CRLF3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.68542 H3K4me3_megakaryocyte_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null FOXP4 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 15.997 HMGXB3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.51528 GSE210101,GSE210114_1_v_3_urod_human RummaGEO Gene Perturbation Signatures 1.0 null LINS1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.2986 GTEX-XOTO-0011-R5A-SM-4B657 GTEx Tissue Sample Gene Expression Profiles 1.0 0.917444 TAGLN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.78441 NR2F1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.6048 SSTR3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.53084 GTEX-P44H-0011-R8A-SM-2XCEL GTEx Tissue Sample Gene Expression Profiles 1.0 1.07135 CHD2 ENCODE Transcription Factor Targets 1.0 null GSE135350_3_v_0_dexamethasone_human RummaGEO Drug Perturbation Signatures 1.0 null GTEX-Q2AG-0011-R9A-SM-2HMJ6 GTEx Tissue Sample Gene Expression Profiles 1.0 1.49038 Lymph node disease DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.113 superficial stratum of CoPL Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.27333 496100549_FWM_no dementia_TBI_87_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.02107 PMC12048643-44318_2025_409_MOESM3_ESM.xlsx-regulonTargets-MEF2C_MEF2C Rummagene Transcription Factor Associations 2026 1.0 null IRF3 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 49.8856 GSE140936,GSE140938_0_v_1_slfn11_human RummaGEO Gene Perturbation Signatures 1.0 null striatum_8 yrs_M_12841 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.03028 r7 part of cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.7174 supraventricular arrhythmia GWASdb SNP-Phenotype Associations 1.0 0.919744 SG in dysgranular insular cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.04168 RDES CCLE Cell Line Gene Expression Profiles 1.0 1.34738 TRAF5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.19229 SATB1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 17.2285 corpus callosum Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -0.91431 SPI1 ChEA Transcription Factor Targets 1.0 null striatum_37 pcw_M_263195015 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -1.67238 superficial stratum of r7Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.29229 ALG5 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.15988 GTEX-S3XE-1526-SM-4AD5A GTEx Tissue Sample Gene Expression Profiles 1.0 1.31003 IRF9 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 27.6445 MGRN1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.45355 ETV5::FOXO1 JASPAR Predicted Human Transcription Factor Targets 2025 1.0 25.5661 orbital frontal cortex_16 pcw_M_12287 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.854226 H3K4me3_ES-E14_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null SLC2A10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.3403 GTEX-T6MN-0011-R9A-SM-32QOZ GTEx Tissue Sample Gene Expression Profiles 1.0 1.57265 SAYSD1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.80623 disease of mental health GWASdb SNP-Disease Associations 1.0 0.04668 H3K4me1_CH12.LX_mm9_2 ENCODE Histone Modification Site Profiles 1.0 null TE-6 COSMIC Cell Line Gene Mutation Profiles 1.0 null HLF CCLE Cell Line Gene Expression Profiles 1.0 2.40871 RUNX1-22412390-EML-MOUSE ChEA Transcription Factor Binding Site Profiles 1.0 null r5 part of the cochlear column Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.16504 GSE148066,GSE157787_2_v_10_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null NRF1 Pathway Commons Protein-Protein Interactions 1.0 null r4 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.21938 Msx3 JASPAR Predicted Mouse Transcription Factor Targets 2025 1.0 19.9831 GTEX-RU72-0011-R8A-SM-2TF61 GTEx Tissue Sample Gene Expression Profiles 1.0 0.841051 CFAP119 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.55415 GTEX-WL46-0011-R5A-SM-3LK6V GTEx Tissue Sample Gene Expression Profiles 1.0 1.14909 NCCIT COSMIC Cell Line Gene Mutation Profiles 1.0 null ISTMEL1 DepMap CRISPR Gene Dependency 1.0 4.85854 ventral juxtacommissural pretectal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.15674 GTEX-PVOW-0011-R5A-SM-32PL7 GTEx Tissue Sample Gene Expression Profiles 1.0 1.12531 globose nucleus, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 1.66605 INA6 DepMap CRISPR Gene Dependency 1.0 2.70698 ZNF7 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.07763 GTEX-OHPM-2126-SM-3LK75 GTEx Tissue Sample Gene Expression Profiles 1.0 1.91491 POLR2A_lung_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-T6MN-0011-R2A-SM-32QOW GTEx Tissue Sample Gene Expression Profiles 1.0 1.15308 TMX4 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.4983 LUC7L2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.39472 MYH3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.16761 r5 part of posteroventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.71267 inner SZ in posterior parahippocampal cortex Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles -1.0 -1.01441 r7 part of parapyramidal nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.76293 Perturb_8943_Mut_RB1_SRP220467 PerturbAtlas Signatures of Differentially Expressed Genes for Gene Perturbations 1.0 20.0 GSE148066,GSE157787_3_v_10_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null NID1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.2043 496100380_FWM_no dementia_no TBI_78_M Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles 1.0 2.50711 ING3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.23485 Duodenum cancer DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 1.0 1.517 r3 part of dorsal cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.88232 GTEX-XPT6-1626-SM-4B655 GTEx Tissue Sample Gene Expression Profiles 1.0 1.34685 RPP25L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.5441 CIC CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.75025 GTEX-RU72-0011-R2A-SM-2TF6O GTEx Tissue Sample Gene Expression Profiles 1.0 0.995416 GPR176 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.64395 GTEX-QVUS-0011-R9A-SM-3GIJA GTEx Tissue Sample Gene Expression Profiles 1.0 2.08711 superior olivary complex, right Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles 1.0 0.905427 MED1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.08695 OS9 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.06578 Ventral cochlear nucleus Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -1.51744 PMC3889689-elife01439s001.xls-RFX2_rnaseq_chip_DirectDE_final-GeneName_RFX2 Rummagene Transcription Factor Associations 2026 1.0 null MXI1_MEL cell line_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null GTEX-TSE9-0011-R8A-SM-3DB7R GTEx Tissue Sample Gene Expression Profiles 1.0 1.13633 intracellular membrane-bounded organelle COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 superficial stratum of r5BM Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.03018 laterodorsal subdivision of area 8 Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles 1.0 1.16356 SPRTN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.15808 PLOD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.85513 RMI2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.28648 EPHA2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 4.1445 EBF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.46144 septopallidal part of the olfactory tuberculum Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.66259 spleen BioGPS Mouse Cell Type and Tissue Gene Expression Profiles 1.0 0.892132 GSE117042_1_v_3_tunicamycin_mouse RummaGEO Drug Perturbation Signatures 1.0 null DHX32 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.31872 inferolateral temporal cortex (area TEv, area 20)_13 pcw_M_12888 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 1.13004 L540 CCLE Cell Line Gene Expression Profiles 1.0 1.62487 H3K4me3_thymus_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null spleen HPA Tissue Protein Expression Profiles -1.0 -1.02941 IX, left, lateral hemisphere Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles -1.0 -1.84579 Purkinje cell layer of CbVCx Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.01332 STAT3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.55882 white matter of cerebellar vermis Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles 1.0 1.07058 ZNF267 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.47511 SCARB2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.99134 posterior (caudal) superior temporal cortex (area 22c)_12 pcw_F_12960 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq 1.0 0.895514 GSE140322_3_v_2_imatinib_human RummaGEO Drug Perturbation Signatures 1.0 null TESMIN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.89093 MORC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.65572 PDIA6 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.2039 PMC9576445-IJG2022-9264555.nxml--Potential_targets_of_hsa-miR-15b-5p_AND_hsa-miR-16-5p_NOT_hsa-miR-184_NR4A2 Rummagene Transcription Factor Associations 2026 1.0 null PLCD3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.34601 Ebolavirus(EBOV)_1day_Splenocytes_19683682_GSE17509 GEO Signatures of Differentially Expressed Genes for Viral Infections 1.0 2.0805 GLUD2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.77879 EP300_CH12.LX_mm9_1 ENCODE Transcription Factor Binding Site Profiles 1.0 null APPBP2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.13722 ARFGAP3 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.4014 MFE280 DepMap CRISPR Gene Dependency 1.0 11.9869 GPM6B CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.46738 H3K9ac_CH12.LX_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null EMC10 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.01599 RNF24 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.60827 H3K27ac_spleen_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null H3K4me1_small intestine_mm9_1 ENCODE Histone Modification Site Profiles 1.0 null ES6 COSMIC Cell Line Gene Mutation Profiles 1.0 null KDF1 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.0425 ATPAF2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 3.22595 intracellular part COMPARTMENTS Experimental Protein Localization Evidence Scores 1.0 0.233497 MRPS24 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.12862 OVCAR-5 COSMIC Cell Line Gene Mutation Profiles 1.0 null BL667 (BIRC6) NURSA Protein Complexes 1.0 null striatum_4 mos_M_12890 Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq -1.0 -0.953831 GSE148066,GSE157787_5_v_6_n4bp1_mouse RummaGEO Gene Perturbation Signatures 1.0 null DUS1L CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -2.52379 GSE172458_0_v_1_cisplatin_human RummaGEO Drug Perturbation Signatures -1.0 null CFL2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas -1.0 -3.35467 LC1F CCLE Cell Line Gene Expression Profiles -1.0 -1.63449 RUSC2 CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.80749 MAJIN CM4AI KOLF21J CRISPRi Gene Perturbation Atlas 1.0 2.71959 mantle zone of r4Co Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles -1.0 -2.37586