association	dataset	threshold value	standardized value
ZSCAN4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	185.06
RPL18A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.55627
GSE210662_2_v_0_znf165_human	RummaGEO Gene Perturbation Signatures	1.0	null
FOXC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	77.0753
GSE173911,GSE173917_0_v_1_morc3_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
Weaver syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.323
Autosomal dominant intellectual developmental disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.009
PAX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9444
GSE138001_5_v_4_rorb_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
TBX18	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7008
RASSF4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.15223
ATP11B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.64461
ZNF558	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	570.035
RFX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6786
GSE239844_7_v_10_crizotinib_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE143692_0_v_1_trim8_human	RummaGEO Gene Perturbation Signatures	1.0	null
Ciliary plasm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.169
Albright's hereditary osteodystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.297
PLCXD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.45687
CCDC102A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.48493
ZNF709	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0031
PMC12616242-can-24-3452_supplementary_table_s4_suppst4.xlsx-EWSR1-FLI1-KDM6B_genes-Genes_associated_to_EWSR1_FLI1-KDM6B_peaks_in_A-673_FLI1	Rummagene Transcription Factor Associations 2026	1.0	null
ZNF500	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.04873
HOXA10	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.23
GSE188869,GSE188871_2_v_3_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE156454_0_v_1_tamoxifen_human	RummaGEO Drug Perturbation Signatures	-1.0	null
SOX18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.28995
TCF7L2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.7354
D-283MED cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.753
SLC16A13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.70483
NRN1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.66505
RPS8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.17514
FOXB1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	129.32
PBX1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1667
RUSC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.80749
GSE191105_2_v_3_nat1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Multiple epiphyseal dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.297
FYCO1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.98689
GSE144919,GSE145177_1_v_0_dazl_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE214161,GSE214233_0_v_2_zmym2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ATOH7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.117
MYB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	15.7944
POU2F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.0782
CDKN2AIPNL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.14948
Sotos syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.16
UBLCP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08368
CEP95	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2038
DMRTA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.1511
TFEB	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.3758
PMC11285331-cd-23-0539_table_s1_suppst1.xlsx-Lost_AR_Peaks-Unnamed_20_AR	Rummagene Transcription Factor Associations 2026	1.0	null
FOXF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.8889
ZNF75D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.9914
COPS5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.46964
GATA2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.7787
RPRM	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.28376
ZNF214	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.2855
GSE182680,GSE182683_0_v_6_dexamethasone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
MEF2D	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8468
Hmx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.9918
ATP2A2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.23321
ARHGDIA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.99349
DHRS1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45432
HASPIN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.02118
HLA-B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12555
RNF20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63713
FBXO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.0546
Geleophysic dysplasia 2	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	2.038
Male urethra	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	1.124
SAMM50	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7745
IRF3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.796
Peritubular contractile cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.77
KIF2A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36739
MAPK14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10469
GSE217378_2_v_0_lin28b_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE120595_0_v_4_arid2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GATA1::TAL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.063
SH3BP4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36245
SUPT3H	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.05168
UTP14A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01717
SLC25A27	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07783
TBR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.0812
GSE95771_0_v_3_ruxolitinib_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
STMP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.32284
ARL8B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3537
FAM156B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02947
POU5F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	21.8125
RPP40	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.03051
SLC16A5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20915
KCNA6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.508
KIAA0753	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.50581
Acromesomelic dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.498
GSE57871_1_v_2_vorinostat_human	RummaGEO Drug Perturbation Signatures	-1.0	null
DRG2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.24981
Inner dynein arm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.746
MGA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.6418
PYGL	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48182
MPC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.54159
GSE88819_6_v_10_tug1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DMTF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06181
PSMB8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.7255
DLD	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.25942
Ebf2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.2053
GSE120595_5_v_4_arid2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DES	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.04734
Seckel syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.087
GSE158975_0_v_1_spp1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
RORA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.5489
GSE120595_0_v_1_arid2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
DDX59	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35442
TDGF1P3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.10394
PRKAB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.09666
NEURL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.87683
SCX	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.27603
GSE183994_1_v_0_scml2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE247764_5_v_2_nell2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
RFX5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.9702
MAML2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08042
SH3GLB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.63913
PDE5A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67912
RAD51D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.75618
PMC11285331-cd-23-0539_table_s1_suppst1.xlsx-Lost_AR_Peaks-Unnamed_19_AR	Rummagene Transcription Factor Associations 2026	1.0	null
CENPI	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14676
TAX1BP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.9841
ZIM3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	72.7231
GSE210655_3_v_7_cisplatin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
THAP11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2366
SESN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.47211
RRP15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.59665
GSE197562_0_v_3_nox4_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
ZNF266	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44568
CUL9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14535
MFSD13A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.36536
GULP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33258
Homocystinuria	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.025
DNMT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.85424
NUP54	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37704
RRP9	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32243
ASCL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.14419
ETNK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.13801
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_15_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
Trophoblast stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.695
GSE210476_11_v_10_rutaecarpine_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE195559_3_v_1_notch1_human	RummaGEO Gene Perturbation Signatures	1.0	null
Campomelic dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.204
GLB1L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.93338
PRKACG	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.56549
GSE198036,GSE198041_0_v_3_sox9_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
KLF9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	162.316
DHX29	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.45078
WDHD1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.2216
Foxj2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	37.5177
IKZF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.6406
POU5F1B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.7781
CAMKMT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.30804
ZSWIM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20974
NKX6-3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.882
Hoxd13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	57.5274
Foxf1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	23.2192
ZNF382	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.274
Atoh1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.4071
GSE94814_1_v_3_reck_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
EOMES	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.8531
ZNF724	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08221
Tatton-Brown-Rahman syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.207
Foxo1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.1343
ONECUT3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	63.3199
TBX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.1129
PMC10330983-ab-22-0432-Supplementary-Table-8.pdf-47-INTS1_MAFK_MAFK	Rummagene Transcription Factor Associations 2026	1.0	null
TBX18	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.0641
Medulloblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.643
CENPA	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12943
TP63	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.9711
MSI2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.06435
ATL2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	4.04835
CERS5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.63875
Sperm plasma membrane	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.027
TEX30	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.40798
PMC10602967-18_2023_4927_MOESM3_ESM.xlsx-DDX5_17_KD_HEK293-Unnamed_2_AR	Rummagene Transcription Factor Associations 2026	1.0	null
IRF5	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	17.0569
TCF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.1519
GSE186471_1_v_0_carnosol_human	RummaGEO Drug Perturbation Signatures	-1.0	null
BBS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.50475
METTL14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.84721
Foxo3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	22.3813
MEF2A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	32.1558
GSE229973_3_v_7_cisplatin_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE238116_1_v_2_egr1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
CERS6	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.4053
UNC5D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.02412
Otopalatodigital syndrome spectrum disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.377
SOX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.5665
PRDM4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.18382
BANP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.33283
POU3F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	35.074
Axonemal dynein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.526
MAX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.7125
GSE88819_1_v_4_tug1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
FUNDC1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.86563
IREB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.10373
Lhx3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	75.6
NFATC4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	19.0303
GSE180800,GSE180801_0_v_5_tex10_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE113817_2_v_1_bach1_human	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE203485_1_v_0_zdhhc2_human	RummaGEO Gene Perturbation Signatures	-1.0	null
Geleophysic dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.484
GSE206270_1_v_0_lsm14b_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
FOXF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03234
ZSCAN16	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.4601
GOLT1B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.24781
ANKMY2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.29535
Rectum cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.04
HPRT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.014
GSE183994_3_v_0_scml2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
TBX3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	20.3662
TMEM120B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.40963
Stat6	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	27.6879
MXRA7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60442
GSE88819_7_v_10_tug1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
GSE210580_0_v_11_rag2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
SOX8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.267
TAF1D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.3456
IRF4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.3782
ROM1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.36337
GDPD2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.11089
Spinal cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.123
GSE195559_0_v_9_notch1_human	RummaGEO Gene Perturbation Signatures	1.0	null
RTRAF	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.59195
PHF21A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.82669
IZUMO4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.20174
NHERF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28469
GSE228261_0_v_1_elesclomol_human	RummaGEO Drug Perturbation Signatures	1.0	null
GSE182680,GSE182683_0_v_2_dexamethasone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GRSF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20003
PLEKHJ1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03258
DUX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	34.5367
RPAIN	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44942
METTL21C	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.06153
Hmx1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	18.9078
NFATC3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	14.533
EGR4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	107.117
PMC12211054-spectrum.00100-25-s0002.pdf-55-HOXA5_HOXA5	Rummagene Transcription Factor Associations 2026	1.0	null
SRF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.0414
Pax7	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	46.8216
FOXH1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.1878
RPL11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60895
RPL13A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.97028
GSE232223_1_v_0_letmd1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
IRS4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07648
TMEM115	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.22705
SLFN12	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.25397
GSE95771_0_v_4_ruxolitinib_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
SENP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0266
HEPH	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.40837
ATRAID	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.28415
TBX20	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	22.6446
ZNF80	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.01858
FOXC1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	125.079
SIPA1L2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.24389
c2	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.825
GSE153064,GSE153065_1_v_2_hdac3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
TBCB	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59519
EIF3E	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.6001
Gonocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.75
FOXE1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	121.425
SMARCA1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.52199
POLR2D	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.82612
gh1	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.844
Yy1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	29.1705
Androgen insensitivity syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.109
PMC9270251-mmc2.xlsx-2_Filtered_DEGs_Control_vs_KD_2-Gene_ID_AR	Rummagene Transcription Factor Associations 2026	1.0	null
CDX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.7736
CTNNBL1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.30021
HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	59.5818
PEX14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.0835
HNF4G	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.271
EGR1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	99.0669
ZNF157	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.8209
Coffin-Siris syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.145
SLC39A8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.02593
ANKRD52	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45422
IRF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3172
GPR150	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60993
GSE130217_5_v_3_sesn2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF766	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.9527
HOXD9	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.1874
GSE182680,GSE182683_5_v_6_dexamethasone_human	RummaGEO Drug Perturbation Signatures	-1.0	null
ZNF8	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	42.4955
NADK2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12874
RNF113A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10728
Fibrochondrogenesis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.658
Weill-Marchesani syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.375
GSE157684,GSE173391_0_v_1_rgcc_human	RummaGEO Gene Perturbation Signatures	1.0	null
PNPLA2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.00774
TSEN34	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.20748
BARX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	27.7625
PPARA::RXRA	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	40.6234
IGSF9B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36304
DDX24	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	5.06194
ETV2::HOXB13	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.3152
ZNF341	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	24.9312
KLK5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.23574
ATG16L1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.48539
Axoneme	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.17
ZBED1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.07637
TBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	18.3155
NDUFB5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.44868
GSE88819_0_v_10_tug1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
PMC9387164-Table_2.XLSX-Sheet1-CLOCK_CLOCK	Rummagene Transcription Factor Associations 2026	1.0	null
ESCO2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46502
SLFN5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22435
UBE2T	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.03604
FMO5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.46388
FOXD2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	67.3138
EXOSC7	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.18961
CDR2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.14686
MEPCE	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14514
GSE88819_1_v_2_tug1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
Msgn1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	26.7399
Outer dynein arm	COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025	1.0	1.686
NUF2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.43648
Sox11	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.7704
EIF3L	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.68777
NUDT15	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.98223
ZKSCAN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.45605
GSE210655_3_v_5_cisplatin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
Cornelia de Lange syndrome	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.031
LHX4	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.50468
IRF2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	45.5
Medulloblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025	1.0	0.724
GSE210655_3_v_0_cisplatin_mouse	RummaGEO Drug Perturbation Signatures	-1.0	null
CPSF1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.12119
ZNF354A	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	79.1329
POU3F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	36.0513
PBX2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.3154
GSE199660_1_v_3_secretin_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
PPHLN1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60119
Phimosis	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.381
Otopalatodigital syndrome type 1	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.629
KLK13	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.48437
FAM32A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.35931
FOXL1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	16.4994
GSE120595_5_v_1_arid2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
HERC2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.33261
MAF	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	29.3767
MEF2B	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	31.6993
EEF1A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.31416
KIAA1958	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.10464
SRCAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.36787
Dmrt1	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	24.9534
RBM38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.32681
CNOT8	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.13123
DMRTC2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.647
KLF11	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	114.078
POU3F4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	43.558
YJU2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.08257
STMN3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.90191
GOLPH3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.15102
GNG14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.37344
GSE203485_1_v_0_sunitinib_human	RummaGEO Drug Perturbation Signatures	-1.0	null
GSE153064,GSE153065_1_v_0_hdac3_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
POU3F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	55.5064
RNF25	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.51523
IRF7	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	25.9019
ZDHHC21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.1614
ONECUT1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	46.5687
NUBP1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.79997
TCAP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.09003
GSE180200,GSE180201_15_v_1_qpctl_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
POU2F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	39.744
GSE88819_1_v_8_tug1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
GSE165548_2_v_13_gemcitabine_human	RummaGEO Drug Perturbation Signatures	1.0	null
RBPJ	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	28.4217
Foxj3	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	65.964
ARPC3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.08953
PMC11216188-peerj-12-17616-s013.pdf-88-NR3C2_NR3C2	Rummagene Transcription Factor Associations 2026	1.0	null
PMC10602967-18_2023_4927_MOESM3_ESM.xlsx-DDX5_17_KD_HEK293-Unnamed_1_AR	Rummagene Transcription Factor Associations 2026	1.0	null
RPS27A	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.07481
GTEx Breast 20-29 vs 70-79	GTEx Tissue-Specific Aging Signatures	1.0	3.74116
ZNF784	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.22678
KCNH2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.12467
GSE130217_0_v_3_sesn2_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
BUD31	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.14542
ZNF547	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.4394
Foxl2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	39.4395
ZNF385B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.57737
GSE136238_1_v_0_ebf1_mouse	RummaGEO Gene Perturbation Signatures	1.0	null
CLDN11	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.67134
Acromicric dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.729
TP73	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	60.6984
GSE240386,GSE242143_1_v_4_morc2_human	RummaGEO Gene Perturbation Signatures	1.0	null
ZNF430	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.01992
LACTB2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.646
Spondyloepimetaphyseal dysplasia	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.174
PSMA5	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.29567
GSE122191_1_v_0_zbtb24_human	RummaGEO Gene Perturbation Signatures	-1.0	null
CDX4	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	26.1171
MED21	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	3.80863
RPS20	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.51368
CLOCK	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1548
C3orf14	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.32857
DHX38	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.65871
DPRX	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	23.6365
Hoxa13	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	58.739
GSE188870,GSE188871_4_v_2_kat7_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
PMC6400843-Table_5.xls-C_FOXM1_Correlated_genes-Ensembl_ID_FOXM1	Rummagene Transcription Factor Associations 2026	1.0	null
GSE171837_0_v_2_bortezomib_mouse	RummaGEO Drug Perturbation Signatures	1.0	null
PMC8379183-41467_2021_25326_MOESM9_ESM.xlsx-SALL4_unique_peaks-Unnamed_14_SALL4	Rummagene Transcription Factor Associations 2026	1.0	null
GSE191105_2_v_4_nat1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
HMGB1P1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.36545
AP1S1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.60124
ZNF350	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.73685
GTF2H2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.39998
Hypospadias	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.587
PMC12000322-41419_2025_7601_MOESM9_ESM.xlsx-H3122-AR_somatic_filtered_PASS-Unnamed_47_AR	Rummagene Transcription Factor Associations 2026	1.0	null
POU4F2	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	52.4871
DPEP3	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.67314
JMY	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.60848
Pseudohypoparathyroidism	DISEASES Text-mining Gene-Disease Association Evidence Scores 2025	1.0	1.13
FOXD3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	177.627
GSE196117_6_v_8_clarithromycin_human	RummaGEO Drug Perturbation Signatures	1.0	null
SARNP	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.59848
GSE88819_1_v_12_tug1_mouse	RummaGEO Gene Perturbation Signatures	-1.0	null
POU2F3	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	56.8512
POU1F1	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	33.0891
MEF2C	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.8357
MALT1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-3.09397
ALDH4A1	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.54516
Hmx2	JASPAR Predicted Mouse Transcription Factor Targets 2025	1.0	40.8775
ARHGAP11B	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.37173
DNTTIP2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.70118
TERT	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.1368
PUF60	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	1.0	2.7198
RTN2	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.43371
MRPL54	CM4AI KOLF21J CRISPRi Gene Perturbation Atlas	-1.0	-2.69496
ZNF410	JASPAR Predicted Human Transcription Factor Targets 2025	1.0	47.2567