association	dataset	threshold value	standardized value
MAFA	MotifMap Predicted Transcription Factor Targets	1.0	null
mir15107	GeneRIF Biological Term Annotations	1.0	null
entorhinal cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.264011
players	GeneRIF Biological Term Annotations	1.0	null
NFATC1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
scleral disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.574217
granulin	GeneRIF Biological Term Annotations	1.0	null
pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.126467
20068076-Table3	GeneSigDB Published Gene Signatures	1.0	null
C32TG	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.897958
AN3 CA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29415
leg muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.113101
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941608
SNU1272	CCLE Cell Line Gene CNV Profiles	1.0	1.94257
H3K36me3_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
overexpressed	GeneRIF Biological Term Annotations	1.0	null
risc complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.4608
H3K4me1_olfactory bulb_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
tissues	GeneRIF Biological Term Annotations	1.0	null
SKNMC	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50355
reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.227186
adenomas	GeneRIF Biological Term Annotations	1.0	null
immune system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.179239
CTCF_retinal pigment epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
brain cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069392
altered	GeneRIF Biological Term Annotations	1.0	null
tissues, cell types and enzyme sources	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.916496
group	GeneRIF Biological Term Annotations	1.0	null
extracellular membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.205399
H3K36me3_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
identifying	GeneRIF Biological Term Annotations	1.0	null
miR-targeted genes in muscle cell - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
CTCF_retinal pigment epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
glioma	GeneRIF Biological Term Annotations	1.0	null
head	GeneRIF Biological Term Annotations	1.0	null
regulating	GeneRIF Biological Term Annotations	1.0	null
H2AK5ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K4me1_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NFATC1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
prognosis	GeneRIF Biological Term Annotations	1.0	null
regulated	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_U2OS_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NR1I2	ChEA Transcription Factor Targets	1.0	null
gastric cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.439123
H3K36me3_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SCLC-21H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26272
roles	GeneRIF Biological Term Annotations	1.0	null
cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.067864
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
MOLM6	CCLE Cell Line Gene CNV Profiles	1.0	1.47473
psychotic disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.105323
malignant glioma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.301254
H3K36me3_Adipose Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
sall4	GeneRIF Biological Term Annotations	1.0	null
MKN-74	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.46801
G59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.80644
H3K36me3_Breast Myoepithelial Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
h4 neuroglioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.72322
acute myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.085388
H3K36me3_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
lps	GeneRIF Biological Term Annotations	1.0	null
hematologic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.182666
BFTC-909	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.845187
lipid	GeneRIF Biological Term Annotations	1.0	null
squamous cell carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.289744
allowing	GeneRIF Biological Term Annotations	1.0	null
RB1_KD_GSE50532_624_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
components	GeneRIF Biological Term Annotations	1.0	null
MFM-223	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01871
PATU8902	CCLE Cell Line Gene CNV Profiles	1.0	2.64996
H3K36me3_H7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.897249
OUMS23	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
gastrointestinal system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.060215
dementia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.703536
H3K27ac_kidney_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
MCAS	CCLE Cell Line Gene CNV Profiles	1.0	2.06188
OE33	CCLE Cell Line Gene CNV Profiles	1.0	1.51633
BT-20	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94299
HCC33	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98437
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
accumulation	GeneRIF Biological Term Annotations	1.0	null
BEN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26272
betasite	GeneRIF Biological Term Annotations	1.0	null
cervical carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.585625
SNU-668	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.36694
ribonucleoprotein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.392388
support	GeneRIF Biological Term Annotations	1.0	null
organ system benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.04174
H2AFZ_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me2_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
interleukin6	GeneRIF Biological Term Annotations	1.0	null
nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.539396
demonstrated	GeneRIF Biological Term Annotations	1.0	null
epithelioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.514924
skin	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.066646
Heart Defects, Congenital	CTD Gene-Disease Associations	1.0	1.02485
20485376-TableS3	GeneSigDB Published Gene Signatures	1.0	null
here	GeneRIF Biological Term Annotations	1.0	null
CTCF_MCF-7_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
myopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.056572
H3K36me3_bronchial epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
discriminate	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hematopoietic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055171
YH13	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59252
Neural Tube Defects	CTD Gene-Disease Associations	1.0	1.39002
imr-32 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.432225
quadriceps	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.421529
encountered	GeneRIF Biological Term Annotations	1.0	null
pancreatic beta cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.172402
thorax muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.18987
20448109-Table2	GeneSigDB Published Gene Signatures	1.0	null
targeting	GeneRIF Biological Term Annotations	1.0	null
NR1I2-20693526-LIVER-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
suppresses	GeneRIF Biological Term Annotations	1.0	null
CTCF_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
THP-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.61141
contributing	GeneRIF Biological Term Annotations	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42967
facioscapulohumeral muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.465038
pancreatic cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.128776
micrornas	GeneRIF Biological Term Annotations	1.0	null
cognitive disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.722482
provide	GeneRIF Biological Term Annotations	1.0	null
lymph node	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.2559
Inflammation	CTD Gene-Disease Associations	1.0	1.17366
document	GeneRIF Biological Term Annotations	1.0	null
translation	GeneRIF Biological Term Annotations	1.0	null
YMB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910679
lung cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060262
SKBR3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.82747
correlation	GeneRIF Biological Term Annotations	1.0	null
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846404
digestive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.354826
Hearing Loss, Noise-Induced	CTD Gene-Disease Associations	1.0	2.88009
hepatitis	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
hacat cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.260267
mirna	GeneRIF Biological Term Annotations	1.0	null
hypoxic	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_cardiac mesoderm_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_Adult Liver	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HS 683	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50345
aip	GeneRIF Biological Term Annotations	1.0	null
cervical cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.144031
KASUMI6	CCLE Cell Line Gene CNV Profiles	1.0	1.47745
BICR 78	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54524
amyloid	GeneRIF Biological Term Annotations	1.0	null
organ system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.703134
relationship	GeneRIF Biological Term Annotations	1.0	null
20406893-Table1b	GeneSigDB Published Gene Signatures	1.0	null
hypothesize	GeneRIF Biological Term Annotations	1.0	null
mir181a	GeneRIF Biological Term Annotations	1.0	null
glt1	GeneRIF Biological Term Annotations	1.0	null
HCC1937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26338
H3K36me3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COR-L88	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.985056
urogenital system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.059945
FOS_MCF 10A_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RFX5_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
chronic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.159124
ABC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08981
Learning Disorders	CTD Gene-Disease Associations	1.0	1.40595
20068076-SuppTable9c	GeneSigDB Published Gene Signatures	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846081
cerebral hemisphere	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.382884
therapeutic	GeneRIF Biological Term Annotations	1.0	null
hematopoietic cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.054072
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.970459
examined	GeneRIF Biological Term Annotations	1.0	null
nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.46466
COR-L47	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.39168
KASUMI1	CCLE Cell Line Gene CNV Profiles	1.0	1.63221
bace1	GeneRIF Biological Term Annotations	1.0	null
OUMS-23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.1392
DKMG	CCLE Cell Line Gene CNV Profiles	-1.0	-1.5853
Carcinoma, Hepatocellular	CTD Gene-Disease Associations	1.0	1.25619
THP1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.19563
gastrointestinal system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.165435
multiple	GeneRIF Biological Term Annotations	1.0	null
rad51	GeneRIF Biological Term Annotations	1.0	null
glial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079721
decrease	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_testis_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
breast cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.219264
eye and adnexa disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.050406
eGFP-JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NUR77	MotifMap Predicted Transcription Factor Targets	1.0	null
loss	GeneRIF Biological Term Annotations	1.0	null
correlated	GeneRIF Biological Term Annotations	1.0	null
pleomorphic adenoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.35082
EZH2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disease of anatomical entity	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.330295
ACHN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15279
H3K4me1_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
KASUMI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.08819
H3K36me3_cardiac mesoderm_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
sk-n-sh cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.32132
OVKATE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.35396
Carcinoma, Non-Small-Cell Lung	HuGE Navigator Gene-Phenotype Associations	1.0	null
H3K36me3_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.28919
cancer stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.358174
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
POLR2A_H1-hESC_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-436	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01871
siha cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.381003
demonstrate	GeneRIF Biological Term Annotations	1.0	null
MEL-HO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.847091
gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.531089
eye disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.05201
H3K9me1_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
downregulates	GeneRIF Biological Term Annotations	1.0	null
cerebral gray matter	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.323509
oncogene	GeneRIF Biological Term Annotations	1.0	null
keratinocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.187507
H3K27me3_G1E-ER4_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_CD19 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
direct	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_Adult Kidney	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
refractive error	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.05932
telencephalon	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.377621
PA-TU-8902	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.57549
adenocarcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.258917
H3K36me3_Stomach Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
glioma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.124183
CTCF_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HSF1	MotifMap Predicted Transcription Factor Targets	1.0	null
PK-59	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.81811
dna	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_Brain Anterior Caudate	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MEC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.45476
precursor	GeneRIF Biological Term Annotations	1.0	null
skeletal system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.21573
POLR2A	ENCODE Transcription Factor Targets	1.0	null
ratio	GeneRIF Biological Term Annotations	1.0	null
mir107	GeneRIF Biological Term Annotations	1.0	null
HH	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59763
regions	GeneRIF Biological Term Annotations	1.0	null
gastric	GeneRIF Biological Term Annotations	1.0	null
neck	GeneRIF Biological Term Annotations	1.0	null
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
H3K4me1_brown adipose tissue_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
epidermis	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07219
muscle tissue disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.056091
gastric cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.6461
SUDHL10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54607
endocrine gland cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.047871
thorax	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.374243
Fatty Liver	CTD Gene-Disease Associations	1.0	1.21076
CTCF	ENCODE Transcription Factor Targets	1.0	null
HNF4	MotifMap Predicted Transcription Factor Targets	1.0	null
non-small cell lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.293866
MCAS	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.45239
15284443-Table5	GeneSigDB Published Gene Signatures	1.0	null
cascade	GeneRIF Biological Term Annotations	1.0	null
progresses	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_CH12.LX_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_CH12.LX_mm9_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SK-OV-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42967
hepatocytes	GeneRIF Biological Term Annotations	1.0	null
20068076-SuppTable11b	GeneSigDB Published Gene Signatures	1.0	null
carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.160021
G121	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02873
cervical cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.147839
extensor	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.320591
neuroblastoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.393819
PBX3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
limbic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.257237
KMS-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826465
central nervous system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.436778
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.909381
KARPAS422	CCLE Cell Line Gene CNV Profiles	-1.0	-1.60411
cdk6	GeneRIF Biological Term Annotations	1.0	null
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.07022
POLR2A_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ASPC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.970459
lymphoid tissue	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.242054
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.19802
Necrosis	CTD Gene-Disease Associations	1.0	1.41008
directly	GeneRIF Biological Term Annotations	1.0	null
KNS81	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43434
H3K4me1_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
miR-targeted genes in lymphocytes - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
basis	GeneRIF Biological Term Annotations	1.0	null
C3A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.15041
leukocyte	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056236
relative	GeneRIF Biological Term Annotations	1.0	null
uterine cervix	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.135852
19924232-TableS2	GeneSigDB Published Gene Signatures	1.0	null
miapaca-2 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.311145
squamous	GeneRIF Biological Term Annotations	1.0	null
SK-BR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68796
SNU-423	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.845187
cerebral lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.463013
lymphoblastic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.167452
u87	GeneRIF Biological Term Annotations	1.0	null
epithelial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.469211
miR-targeted genes in epithelium - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
HN	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.39536
acute myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.112831
etiologies	GeneRIF Biological Term Annotations	1.0	null
NCI-H358	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02873
poor	GeneRIF Biological Term Annotations	1.0	null
MAFK_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lung cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.078538
RAD21	ENCODE Transcription Factor Targets	1.0	null
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.6988
receptorinteracting	GeneRIF Biological Term Annotations	1.0	null
lung cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.214765
cervical squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.379875
lung	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056673
cdk5r1	GeneRIF Biological Term Annotations	1.0	null
SNU668	CCLE Cell Line Gene CNV Profiles	1.0	1.80119
chromosomal	GeneRIF Biological Term Annotations	1.0	null
CTCF_choroid plexus epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
stem	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_heart_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_HepG2_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
frequently	GeneRIF Biological Term Annotations	1.0	null
polysome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.180634
H3K9ac_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
chemotherapy	GeneRIF Biological Term Annotations	1.0	null
virusinduced	GeneRIF Biological Term Annotations	1.0	null
inverse	GeneRIF Biological Term Annotations	1.0	null
20068076-SuppTable9b	GeneSigDB Published Gene Signatures	1.0	null
eye	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05925
dicer1	GeneRIF Biological Term Annotations	1.0	null
chrm1	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_testis_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
contributes	GeneRIF Biological Term Annotations	1.0	null
T-47D	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.69695
CTCF_kidney_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
benign neoplasm	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.040964
SK-MEL-24	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26338
SW900	CCLE Cell Line Gene CNV Profiles	-1.0	-2.17682
KARPAS-422	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57477
BCL3	ENCODE Transcription Factor Targets	1.0	null
organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.041862
NCI-H2452	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910679
head	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.55249
extracellular organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.118699
pituitary	GeneRIF Biological Term Annotations	1.0	null
pancreatic adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.107075
intracellular	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.286614
HCC38	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941608
organism form	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.050906
20068076-Table2	GeneSigDB Published Gene Signatures	1.0	null
forebrain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.321685
squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.634762
H3K4me1_Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
lower	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_cardiac mesoderm_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bxpc-3 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.347778
blood	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.445268
pancreatic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.213283
head and neck squamous cell carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.222699
intracellular part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.239197
HSC3	CCLE Cell Line Gene CNV Profiles	1.0	1.61169
gastric epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.191926
cepsilon	GeneRIF Biological Term Annotations	1.0	null
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910679
animal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.922483
WM-115	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50345
regulate	GeneRIF Biological Term Annotations	1.0	null
aryl	GeneRIF Biological Term Annotations	1.0	null
acute promyelocytic leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.398357
rad51d	GeneRIF Biological Term Annotations	1.0	null
pancreatic islet	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.112344
extracellular vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.205399
ganglion	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.085495
CEBPB_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_keratinocyte_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mirnamediated	GeneRIF Biological Term Annotations	1.0	null
embryo	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051756
carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.51571
H3K4me2_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
kinase	GeneRIF Biological Term Annotations	1.0	null
breast cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.377402
STAT3_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COV362	CCLE Cell Line Gene CNV Profiles	1.0	2.75538
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.54385
hydrocarbon	GeneRIF Biological Term Annotations	1.0	null
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16205
epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075078
significant	GeneRIF Biological Term Annotations	1.0	null
cyp2c8	GeneRIF Biological Term Annotations	1.0	null
grn	GeneRIF Biological Term Annotations	1.0	null
squamous cell carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.105176
crc	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_cardiac mesoderm_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Abnormalities, Drug-Induced	CTD Gene-Disease Associations	1.0	1.28579
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.03335
H3K36me3_Duodenum Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
YAPC	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07077
H3K27ac_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
stomach	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.153696
common	GeneRIF Biological Term Annotations	1.0	null
pancreatic cancer cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.348148
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.33966
neuroblastoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.127144
20028859-TableS2	GeneSigDB Published Gene Signatures	1.0	null
Neuro D	MotifMap Predicted Transcription Factor Targets	1.0	null
PK-45H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.04395
H3K36me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
promoting	GeneRIF Biological Term Annotations	1.0	null
temporal lobe	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.505495
H3K36me3_small intestine_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
20068076-SuppTable4	GeneSigDB Published Gene Signatures	1.0	null
TOV21G	CCLE Cell Line Gene CNV Profiles	1.0	1.91775
SW 900	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.94312
carcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.451428
Cardiomyopathies	CTD Gene-Disease Associations	1.0	1.01361
reproductive organ cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.185612
H3K36me3_GM06990_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_Colon Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
breast cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.334498
increase	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_small intestine_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
CHK1_KD_GSE54267_671_human_U2OS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
POLR2A_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FTC133	CCLE Cell Line Gene CNV Profiles	1.0	1.33025
notch2	GeneRIF Biological Term Annotations	1.0	null
negatively	GeneRIF Biological Term Annotations	1.0	null
migration	GeneRIF Biological Term Annotations	1.0	null
adult stem cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061078
liver	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.276846
H3K27me3_G1E-ER4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_Brain Germinal Matrix	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11372
alzheimer disease specific cell type	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.246442
il6mediated	GeneRIF Biological Term Annotations	1.0	null
SW 620	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.36111
utility	GeneRIF Biological Term Annotations	1.0	null
gastric adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.320956
amyloid plaque	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.246442
STAT3_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
SK-MEL-31	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02873
FOS_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU398	CCLE Cell Line Gene CNV Profiles	1.0	1.59897
BCL3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
endocrine gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.569222
H3K36me3_megakaryocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hippocampus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.361155
alzheimer's disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.707961
CTCF_choroid plexus epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_G1E-ER4_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
fatty	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
FOS_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
myeloid leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070136
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.897958
lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063123
excretory gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.05915
skeletal muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.316588
accelerated	GeneRIF Biological Term Annotations	1.0	null
gastric cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.568025
breast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.35334
H3K79me1_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
cerebral cortex	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.387781
mirnas	GeneRIF Biological Term Annotations	1.0	null
critical	GeneRIF Biological Term Annotations	1.0	null
PANC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.99801
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PRRX2	JASPAR Predicted Transcription Factor Targets	1.0	null
overexpression	GeneRIF Biological Term Annotations	1.0	null
COR-L279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.02873
cell	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.318953
OCI-M1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08485
NFIC	JASPAR Predicted Transcription Factor Targets	1.0	null
disease of mental health	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.639463
MKN74	CCLE Cell Line Gene CNV Profiles	1.0	1.39253
PSN1	CCLE Cell Line Gene CNV Profiles	1.0	1.5266
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
JM1	CCLE Cell Line Gene CNV Profiles	1.0	1.50897
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01871
other	GeneRIF Biological Term Annotations	1.0	null
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
brain	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.575616
H3K36me3_Brain Mid Frontal Lobe	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K36me3_megakaryocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27ac_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
CTCF_brain microvascular endothelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WM115	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41926
disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.902389
SU-DHL-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.53586
CAKI-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.845187
H3K36me3_erythroblast_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_brain microvascular endothelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_cortical plate_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
inversely	GeneRIF Biological Term Annotations	1.0	null
panc-1 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.224893
H3K36me3_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
limb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.077581
therapy	GeneRIF Biological Term Annotations	1.0	null
U-2932	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46643
lines	GeneRIF Biological Term Annotations	1.0	null
mir103	GeneRIF Biological Term Annotations	1.0	null
SK-MEL-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.40541
leukemia cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056245
myeloid leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.085469
H3K27ac_H1 BMP4 Derived Trophoblast Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCI-H2196	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07132
EPLC-272H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.16205
H3K4me1_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
TCF3	ENCODE Transcription Factor Targets	1.0	null
non-small cell lung cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.063951
H3K36me3_CH12.LX_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SKMEL24	CCLE Cell Line Gene CNV Profiles	-1.0	-1.40268
H3K36me3_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
glial cell projection	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.421604
H3K36me3_megakaryocyte_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
leg	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.096235
H3K36me3_H1	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
spinal cord	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079112
T47D	CCLE Cell Line Gene CNV Profiles	1.0	1.64026
HCC366	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889417
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991577
STAT6	MotifMap Predicted Transcription Factor Targets	1.0	null
H3K36me3_H7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
suppressor	GeneRIF Biological Term Annotations	1.0	null
Liver Diseases	CTD Gene-Disease Associations	1.0	1.17464
H3K79me2_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
upregulation	GeneRIF Biological Term Annotations	1.0	null
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991577
NIH:OVCAR-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826465
nhek cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	1.1297
mirna449a	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
microrna107	GeneRIF Biological Term Annotations	1.0	null
cycle	GeneRIF Biological Term Annotations	1.0	null
NCIH1963	CCLE Cell Line Gene CNV Profiles	-1.0	-1.78156
BCP1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.61167
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.07132
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.941608
POLR2A_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
vertebrate muscular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.070225
CAPAN-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.991577
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bronchogenic carcinoma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060089
p53	GeneRIF Biological Term Annotations	1.0	null
internal female genital organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.062342
diverse	GeneRIF Biological Term Annotations	1.0	null
SNU-398	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.99801
proteinmrna	GeneRIF Biological Term Annotations	1.0	null
tauopathy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.706351
integument	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.071427
Peripheral Nervous System Diseases	CTD Gene-Disease Associations	1.0	1.05972
blood cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056673
RAD21_H1-hESC_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dysregulated	GeneRIF Biological Term Annotations	1.0	null
liver	GeneRIF Biological Term Annotations	1.0	null
tumorigenesis	GeneRIF Biological Term Annotations	1.0	null
leukemia cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.061452
ags cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.363393
respiratory system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.056056
H3K4me1_heart_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
NURR1	MotifMap Predicted Transcription Factor Targets	1.0	null
schizoaffective disorder	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.445052
H3K36me3_G1E-ER4_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9me1_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.21435
oropharynx cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.449571
H3K9ac_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
20068076-SuppTable9a	GeneSigDB Published Gene Signatures	1.0	null
breast cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.060733
KNS-62	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.889417
sclera	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.363393
CTCF_H1-hESC_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ARID3A	JASPAR Predicted Transcription Factor Targets	1.0	null
extracellular region part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.049313
H3K27ac_liver_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
Poisoning	CTD Gene-Disease Associations	1.0	1.15156
mir424	GeneRIF Biological Term Annotations	1.0	null
Anorexia	CTD Gene-Disease Associations	1.0	1.10069
mir185	GeneRIF Biological Term Annotations	1.0	null
BCL3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
myopia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.200982
individuals	GeneRIF Biological Term Annotations	1.0	null
endocrine pancreas	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.108774
H3K36me3_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pathways	GeneRIF Biological Term Annotations	1.0	null
LBP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
H3K36me3_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
form	GeneRIF Biological Term Annotations	1.0	null
enzyme	GeneRIF Biological Term Annotations	1.0	null
sensory system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.048676
invasion	GeneRIF Biological Term Annotations	1.0	null
NFATC1	ENCODE Transcription Factor Targets	1.0	null
female reproductive system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.271604
TCF3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acts	GeneRIF Biological Term Annotations	1.0	null
nb-4 cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.329361
scleral staphyloma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	1.39346
H3K4me1_kidney_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
pancreatic beta cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.437589
SCLC-22H	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36702
mir181b	GeneRIF Biological Term Annotations	1.0	null
localized	GeneRIF Biological Term Annotations	1.0	null
Prenatal Injuries	CTD Gene-Disease Associations	1.0	1.20229
viscus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.320227
BT20	CCLE Cell Line Gene CNV Profiles	-1.0	-2.21328
H3K4me1_placenta_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_skeletal muscle myoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regulator	GeneRIF Biological Term Annotations	1.0	null
HS 746T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7454
membrane-bounded vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.049413
Fatty Liver, Alcoholic	CTD Gene-Disease Associations	1.0	1.06552
efficiency	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_Brain Cingulate Gyrus	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
transcriptional	GeneRIF Biological Term Annotations	1.0	null
prognostic	GeneRIF Biological Term Annotations	1.0	null
disorders	GeneRIF Biological Term Annotations	1.0	null
ccl2	GeneRIF Biological Term Annotations	1.0	null
thigh	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.306083
H2BK12ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.04314
H3K4me1_liver_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
proteincleaving	GeneRIF Biological Term Annotations	1.0	null
RXRA_HepG2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disease of cellular proliferation	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.88516
value	GeneRIF Biological Term Annotations	1.0	null
DMS 79	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.98437
uterus	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087136
gastric epithelium cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.664368
myoblast	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.255234
molecular	GeneRIF Biological Term Annotations	1.0	null
diagnostic	GeneRIF Biological Term Annotations	1.0	null
mir103107	GeneRIF Biological Term Annotations	1.0	null
myotonic dystrophy type 1	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.164359
squamous epithelium	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.097389
SOX4	MotifMap Predicted Transcription Factor Targets	1.0	null
neuro-2a cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.310783
epidermal cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.077423
cell part	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.318953
H3K4me1_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
downregulation	GeneRIF Biological Term Annotations	1.0	null
cdk5	GeneRIF Biological Term Annotations	1.0	null
RXRA	ENCODE Transcription Factor Targets	1.0	null
trunk	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.242983
H3K36me3_erythroblast_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
influence	GeneRIF Biological Term Annotations	1.0	null
changes	GeneRIF Biological Term Annotations	1.0	null
myotonic disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.127529
hindlimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.087876
differentially	GeneRIF Biological Term Annotations	1.0	null
MOLP8	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7585
H3K36me3_Colonic Mucosa	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
MAFK_HepG2_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K36me3_brain_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
terminal loop	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.663368
H3K36me3_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PBX3	ENCODE Transcription Factor Targets	1.0	null
brain	GeneRIF Biological Term Annotations	1.0	null
alzheimers	GeneRIF Biological Term Annotations	1.0	null
let7	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAFK	ENCODE Transcription Factor Targets	1.0	null
thigh muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.31187
MEG01	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73863
schizophrenia	GeneRIF Biological Term Annotations	1.0	null
emphasizing	GeneRIF Biological Term Annotations	1.0	null
H2BK15ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
H3K79me2_liver_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.28294
H3K36me3_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
adenocarcinoma cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.31332
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.20262
COV362	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.98245
glioma cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.560847
damage	GeneRIF Biological Term Annotations	1.0	null
G22	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.00423
pyrazinamide_mus musculus_gpl6246_gse48027	GEO Signatures of Differentially Expressed Genes for Small Molecules	-1.0	null
muscular disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.055204
involves	GeneRIF Biological Term Annotations	1.0	null
pectoral muscle	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.379875
repair	GeneRIF Biological Term Annotations	1.0	null
NCI-H1703	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12977
H3K36me3_H9	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
cellular_component	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.370833
gastrointestinal tract	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079749
pharynx cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.385936
epithelial cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.07939
tends	GeneRIF Biological Term Annotations	1.0	null
vesicle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.048885
extracellular vesicular exosome	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.205399
H3K36me3_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
non-small cell lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.215992
RFX5	ENCODE Transcription Factor Targets	1.0	null
pathophysiology	GeneRIF Biological Term Annotations	1.0	null
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826465
mitogen	GeneRIF Biological Term Annotations	1.0	null
indicated	GeneRIF Biological Term Annotations	1.0	null
musculoskeletal system disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.043847
H3K36me3_H1 Derived Mesenchymal Stem Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
NCIH1755	CCLE Cell Line Gene CNV Profiles	1.0	1.36946
H3K36me3_NT2-D1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
rnai effector complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.440916
KMS-12-PE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26338
PR, GR	MotifMap Predicted Transcription Factor Targets	1.0	null
537 MEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.80644
H3K4me3_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
20068076-SuppTable11a	GeneSigDB Published Gene Signatures	1.0	null
HUG1N	CCLE Cell Line Gene CNV Profiles	1.0	1.95521
H3K36me3_cardiac mesoderm_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
glia	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.079002
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
lung carcinoma	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.180652
H3K36me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU1033	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
chronic lymphocytic leukemia	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.161523
leading	GeneRIF Biological Term Annotations	1.0	null
hematopoietic system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.537416
PE01	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.826465
H3K27ac_H1-hESC_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
implications	GeneRIF Biological Term Annotations	1.0	null
exosome (rnase complex)	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.205059
alimentary canal	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.069973
H3K36me3_CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
membrane-bounded organelle	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.04333
forelimb	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.08396
H3K36me3_cardiac mesoderm_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
female reproductive gland	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.225395
metastasis	GeneRIF Biological Term Annotations	1.0	null
cell type cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.318999
thoracic cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.377031
respiratory system cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.055448
muscular dystrophy	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.108202
neurodegenerative disease	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.505739
OCILY10	CCLE Cell Line Gene CNV Profiles	-1.0	-1.77218
UOK101	CCLE Cell Line Gene CNV Profiles	1.0	1.66714
Hyperplasia	CTD Gene-Disease Associations	1.0	1.06116
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.07077
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	2.88009
H3K27ac_brown adipose tissue_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
sense organ	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.055182
FOS_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TP53BP1_KD_GSE54268_669_human_MCF-10A	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	-1.0	null
H3K36me3_cardiac mesoderm_hg19_8	ENCODE Transcription Factor Binding Site Profiles	1.0	null
muscular system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.068191
20068076-SuppTable10	GeneSigDB Published Gene Signatures	1.0	null
macromolecular complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.045133
stratum spinosum	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.18292
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01871
protein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.040942
PK59	CCLE Cell Line Gene CNV Profiles	1.0	2.4084
suppressed	GeneRIF Biological Term Annotations	1.0	null
NCIH524	CCLE Cell Line Gene CNV Profiles	-1.0	-1.73492
AP-1	MotifMap Predicted Transcription Factor Targets	1.0	null
healthy	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_G1E-ER4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H1693	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01871
FOS_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
embryonic structure	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.051149
keratinocyte cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.189788
NCI-H1869	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.27312
UACC-257	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.01871
interleukin-35 complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	0.219969
15284443-Table6	GeneSigDB Published Gene Signatures	1.0	null
mirna107	GeneRIF Biological Term Annotations	1.0	null
CTCF_MCF-7_hg19_7	ENCODE Transcription Factor Binding Site Profiles	1.0	null
p53induced	GeneRIF Biological Term Annotations	1.0	null
central nervous system	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.55249
alzeimers	GeneRIF Biological Term Annotations	1.0	null
supporting	GeneRIF Biological Term Annotations	1.0	null
pancreatic cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.33965
cofilin	GeneRIF Biological Term Annotations	1.0	null
cancer	DISEASES Text-mining Gene-Disease Association Evidence Scores	1.0	0.890898
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.846404
YMB-1-E	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.910679
treatment	GeneRIF Biological Term Annotations	1.0	null
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.24798
whole body	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.923767
OVK18	CCLE Cell Line Gene CNV Profiles	1.0	1.70778
brain cancer cell	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.410111
MONOMAC1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.48639
CEBPB	ENCODE Transcription Factor Targets	1.0	null
repress	GeneRIF Biological Term Annotations	1.0	null
Lung Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
lung	GeneRIF Biological Term Annotations	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
plag1	GeneRIF Biological Term Annotations	1.0	null
cancers	GeneRIF Biological Term Annotations	1.0	null
glial cell line	TISSUES Text-mining Tissue Protein Expression Evidence Scores	1.0	0.075605
H3K36me3_bronchial epithelial cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_Caco-2_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
esophageal	GeneRIF Biological Term Annotations	1.0	null
micro-ribonucleoprotein complex	COMPARTMENTS Text-mining Protein Localization Evidence Scores	1.0	1.54857