association	dataset	threshold value	standardized value
RELA_GM19099_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inhibited	GeneRIF Biological Term Annotations	1.0	null
healthy	GeneRIF Biological Term Annotations	1.0	null
bcl6	GeneRIF Biological Term Annotations	1.0	null
tuberculosis	GeneRIF Biological Term Annotations	1.0	null
oncomir	GeneRIF Biological Term Annotations	1.0	null
abnormal respiratory system physiology	MPO Gene-Phenotype Associations	1.0	null
aneurysms	GeneRIF Biological Term Annotations	1.0	null
triptolide	GeneRIF Biological Term Annotations	1.0	null
SMC3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tubule	GeneRIF Biological Term Annotations	1.0	null
bcl2	GeneRIF Biological Term Annotations	1.0	null
18812439-Table1	GeneSigDB Published Gene Signatures	1.0	null
CTCF_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
thus	GeneRIF Biological Term Annotations	1.0	null
infection	GeneRIF Biological Term Annotations	1.0	null
EZH2	ENCODE Transcription Factor Targets	1.0	null
H3K4me3_fibroblast of villous mesenchyme_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
splenic	GeneRIF Biological Term Annotations	1.0	null
PE01	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2784
evaluate	GeneRIF Biological Term Annotations	1.0	null
injury	GeneRIF Biological Term Annotations	1.0	null
following	GeneRIF Biological Term Annotations	1.0	null
pertinent	GeneRIF Biological Term Annotations	1.0	null
BRCA1	JASPAR Predicted Transcription Factor Targets	1.0	null
anaplastic	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_GM12875_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
considered	GeneRIF Biological Term Annotations	1.0	null
abnormal mature b cell morphology	MPO Gene-Phenotype Associations	1.0	null
macroglobulinemia	GeneRIF Biological Term Annotations	1.0	null
FOS_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
manner	GeneRIF Biological Term Annotations	1.0	null
showed	GeneRIF Biological Term Annotations	1.0	null
possibility	GeneRIF Biological Term Annotations	1.0	null
fusion	GeneRIF Biological Term Annotations	1.0	null
complicated	GeneRIF Biological Term Annotations	1.0	null
EZH2_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
infiltrate	GeneRIF Biological Term Annotations	1.0	null
ZNF384	ENCODE Transcription Factor Targets	1.0	null
suppressing	GeneRIF Biological Term Annotations	1.0	null
poor	GeneRIF Biological Term Annotations	1.0	null
CTCF_BE2C_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
some	GeneRIF Biological Term Annotations	1.0	null
abnormal hematopoietic system morphology/development	MPO Gene-Phenotype Associations	1.0	null
pulmonary	GeneRIF Biological Term Annotations	1.0	null
status	GeneRIF Biological Term Annotations	1.0	null
FOSL2_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pbmcs	GeneRIF Biological Term Annotations	1.0	null
ZNF217	ENCODE Transcription Factor Targets	1.0	null
RCOR1	ENCODE Transcription Factor Targets	1.0	null
H3K4me3_GM06990_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_Pancreatic Islets	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
tp53inp1	GeneRIF Biological Term Annotations	1.0	null
ipsc	GeneRIF Biological Term Annotations	1.0	null
driven	GeneRIF Biological Term Annotations	1.0	null
absolute	GeneRIF Biological Term Annotations	1.0	null
suggesting	GeneRIF Biological Term Annotations	1.0	null
HCC-15	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.836943
H2AFZ_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
active	GeneRIF Biological Term Annotations	1.0	null
signals	GeneRIF Biological Term Annotations	1.0	null
let7i	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_CD4+ CD25- Th Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
controlled	GeneRIF Biological Term Annotations	1.0	null
controlling	GeneRIF Biological Term Annotations	1.0	null
decreased interleukin-4 secretion	MPO Gene-Phenotype Associations	1.0	null
specific	GeneRIF Biological Term Annotations	1.0	null
lymphocyteassociated	GeneRIF Biological Term Annotations	1.0	null
removing	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of gingiva_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
KDM1A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cd4t	GeneRIF Biological Term Annotations	1.0	null
abnormal adaptive immunity	MPO Gene-Phenotype Associations	1.0	null
NCIN87	CCLE Cell Line Gene CNV Profiles	-1.0	-1.88564
H3K4me3_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
exposed	GeneRIF Biological Term Annotations	1.0	null
repressor	GeneRIF Biological Term Annotations	1.0	null
lkb1	GeneRIF Biological Term Annotations	1.0	null
venous	GeneRIF Biological Term Annotations	1.0	null
pu1	GeneRIF Biological Term Annotations	1.0	null
abnormal cd4-positive helper t cell morphology	MPO Gene-Phenotype Associations	1.0	null
CTCF_GM12878_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_BE2C_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
growthsuppressive	GeneRIF Biological Term Annotations	1.0	null
mirna221	GeneRIF Biological Term Annotations	1.0	null
NCI-H441	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.63763
CUX1	ENCODE Transcription Factor Targets	1.0	null
distinct	GeneRIF Biological Term Annotations	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
Non-alcoholic Fatty Liver Disease	CTD Gene-Disease Associations	1.0	1.1607
end	GeneRIF Biological Term Annotations	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05436
bone	GeneRIF Biological Term Annotations	1.0	null
RELA_GM10847_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
participate	GeneRIF Biological Term Annotations	1.0	null
MOGGCCM	CCLE Cell Line Gene CNV Profiles	1.0	1.35041
least	GeneRIF Biological Term Annotations	1.0	null
monocyte	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
phagocytosis	GeneRIF Biological Term Annotations	1.0	null
cervical	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_Panc1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
abnormal bronchiole morphology	MGI Mouse Phenotype Associations 2023	1.0	null
suggests	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_heart_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
decreased immunoglobulin level	MPO Gene-Phenotype Associations	1.0	null
intervertebral	GeneRIF Biological Term Annotations	1.0	null
ectopic	GeneRIF Biological Term Annotations	1.0	null
mature	GeneRIF Biological Term Annotations	1.0	null
abnormal regulatory t cell number	MPO Gene-Phenotype Associations	1.0	null
sites	GeneRIF Biological Term Annotations	1.0	null
they	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
mutagenesis	GeneRIF Biological Term Annotations	1.0	null
Liver Cirrhosis	CTD Gene-Disease Associations	1.0	1.28456
arthritis	GeneRIF Biological Term Annotations	1.0	null
hsamir155	GeneRIF Biological Term Annotations	1.0	null
eczema	GeneRIF Biological Term Annotations	1.0	null
into	GeneRIF Biological Term Annotations	1.0	null
CHD1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cns	GeneRIF Biological Term Annotations	1.0	null
mutant	GeneRIF Biological Term Annotations	1.0	null
macrophages	GeneRIF Biological Term Annotations	1.0	null
decrease	GeneRIF Biological Term Annotations	1.0	null
mucosa	GeneRIF Biological Term Annotations	1.0	null
CTCF_HeLa-S3_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
fungoides	GeneRIF Biological Term Annotations	1.0	null
IRF1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal regulatory t cell morphology	MPO Gene-Phenotype Associations	1.0	null
lymphomas	GeneRIF Biological Term Annotations	1.0	null
activates	GeneRIF Biological Term Annotations	1.0	null
HCC515	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26351
interactions	GeneRIF Biological Term Annotations	1.0	null
crucial	GeneRIF Biological Term Annotations	1.0	null
soluble	GeneRIF Biological Term Annotations	1.0	null
RAD21	ENCODE Transcription Factor Targets	1.0	null
limit	GeneRIF Biological Term Annotations	1.0	null
increases	GeneRIF Biological Term Annotations	1.0	null
hmgb1	GeneRIF Biological Term Annotations	1.0	null
NFIC	ENCODE Transcription Factor Targets	1.0	null
p5065	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ETS2	MotifMap Predicted Transcription Factor Targets	1.0	null
hepatis	GeneRIF Biological Term Annotations	1.0	null
POLR2A_GM12878_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
liver	GeneRIF Biological Term Annotations	1.0	null
decreased spleen germinal center number	MGI Mouse Phenotype Associations 2023	1.0	null
erk12	GeneRIF Biological Term Annotations	1.0	null
drive	GeneRIF Biological Term Annotations	1.0	null
kidney	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_neural cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K36me3_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ets2	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
phosphorylation	GeneRIF Biological Term Annotations	1.0	null
other	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
mir183	GeneRIF Biological Term Annotations	1.0	null
NCI-H1666	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05516
H3K4me1_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
BCLAF1	ENCODE Transcription Factor Targets	1.0	null
abnormal t-helper 2 cell morphology	MPO Gene-Phenotype Associations	1.0	null
NCI-H1373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.11588
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.01025
miR-targeted genes in squamous cell - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
H3K4me3_fibroblast of mammary gland_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
mtb	GeneRIF Biological Term Annotations	1.0	null
making	GeneRIF Biological Term Annotations	1.0	null
acc	GeneRIF Biological Term Annotations	1.0	null
HSC4	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39308
promotes	GeneRIF Biological Term Annotations	1.0	null
16141321-Table2	GeneSigDB Published Gene Signatures	1.0	null
borna	GeneRIF Biological Term Annotations	1.0	null
MEF2A	ENCODE Transcription Factor Targets	1.0	null
diseasefree	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_thymus_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ccnd1	GeneRIF Biological Term Annotations	1.0	null
vivo	GeneRIF Biological Term Annotations	1.0	null
smad5	GeneRIF Biological Term Annotations	1.0	null
reduction	GeneRIF Biological Term Annotations	1.0	null
abnormal lymphocyte morphology	MPO Gene-Phenotype Associations	1.0	null
H3K4me3_foreskin fibroblast_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
killing	GeneRIF Biological Term Annotations	1.0	null
inversely	GeneRIF Biological Term Annotations	1.0	null
rip1	GeneRIF Biological Term Annotations	1.0	null
required	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
decreased spleen germinal center size	MPO Gene-Phenotype Associations	1.0	null
abnormal dendritic cell physiology	MGI Mouse Phenotype Associations 2023	1.0	null
therapy	GeneRIF Biological Term Annotations	1.0	null
ZR-75-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22279
suppressed	GeneRIF Biological Term Annotations	1.0	null
JUN	ENCODE Transcription Factor Targets	1.0	null
glomerular	GeneRIF Biological Term Annotations	1.0	null
duplication	GeneRIF Biological Term Annotations	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.952711
kaposi	GeneRIF Biological Term Annotations	1.0	null
impact	GeneRIF Biological Term Annotations	1.0	null
BCLAF1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cdc73	GeneRIF Biological Term Annotations	1.0	null
ZR-75-30	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.22145
CTCF_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_spleen_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
Infertility, Male	CTD Gene-Disease Associations	1.0	1.04831
based	GeneRIF Biological Term Annotations	1.0	null
regulate	GeneRIF Biological Term Annotations	1.0	null
mir203	GeneRIF Biological Term Annotations	1.0	null
CTCF_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Cisplatin	CTD Gene-Chemical Interactions	1.0	null
central	GeneRIF Biological Term Annotations	1.0	null
well	GeneRIF Biological Term Annotations	1.0	null
serum	GeneRIF Biological Term Annotations	1.0	null
G84	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.834511
SMC3	ENCODE Transcription Factor Targets	1.0	null
coordinated	GeneRIF Biological Term Annotations	1.0	null
abnormal CD4-positive, alpha beta T cell morphology	MGI Mouse Phenotype Associations 2023	1.0	null
nodal	GeneRIF Biological Term Annotations	1.0	null
reviews	GeneRIF Biological Term Annotations	1.0	null
cfos	GeneRIF Biological Term Annotations	1.0	null
tregs	GeneRIF Biological Term Annotations	1.0	null
HEL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.92257
aeruginosa	GeneRIF Biological Term Annotations	1.0	null
elevation	GeneRIF Biological Term Annotations	1.0	null
mediated	GeneRIF Biological Term Annotations	1.0	null
conduction	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
infarction	GeneRIF Biological Term Annotations	1.0	null
abnormal cd4-positive, alpha beta t cell morphology	MPO Gene-Phenotype Associations	1.0	null
decreased spleen germinal center size	MGI Mouse Phenotype Associations 2023	1.0	null
JUN_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CAL12T	CCLE Cell Line Gene CNV Profiles	1.0	1.57722
cords	GeneRIF Biological Term Annotations	1.0	null
mir195	GeneRIF Biological Term Annotations	1.0	null
stat5	GeneRIF Biological Term Annotations	1.0	null
umbilical	GeneRIF Biological Term Annotations	1.0	null
strand	GeneRIF Biological Term Annotations	1.0	null
PSN1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34195
MAZ_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
immunity	GeneRIF Biological Term Annotations	1.0	null
nscs	GeneRIF Biological Term Annotations	1.0	null
far	GeneRIF Biological Term Annotations	1.0	null
been	GeneRIF Biological Term Annotations	1.0	null
conserved	GeneRIF Biological Term Annotations	1.0	null
gastric	GeneRIF Biological Term Annotations	1.0	null
then	GeneRIF Biological Term Annotations	1.0	null
RAD21_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
preventing	GeneRIF Biological Term Annotations	1.0	null
difference	GeneRIF Biological Term Annotations	1.0	null
circulation	GeneRIF Biological Term Annotations	1.0	null
mir146	GeneRIF Biological Term Annotations	1.0	null
abnormal lymphopoiesis	MPO Gene-Phenotype Associations	1.0	null
instability	GeneRIF Biological Term Annotations	1.0	null
noninvasive	GeneRIF Biological Term Annotations	1.0	null
MAZ	ENCODE Transcription Factor Targets	1.0	null
MOLP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971873
herpesvirus	GeneRIF Biological Term Annotations	1.0	null
conclude	GeneRIF Biological Term Annotations	1.0	null
elevated	GeneRIF Biological Term Annotations	1.0	null
JUN_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
regulating	GeneRIF Biological Term Annotations	1.0	null
BHLHE40	ENCODE Transcription Factor Targets	1.0	null
article	GeneRIF Biological Term Annotations	1.0	null
guillainbarre	GeneRIF Biological Term Annotations	1.0	null
increased hematopoietic cell number	MPO Gene-Phenotype Associations	1.0	null
MXI1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
implied	GeneRIF Biological Term Annotations	1.0	null
increased interleukin-10 secretion	MGI Mouse Phenotype Associations 2023	1.0	null
hozot	GeneRIF Biological Term Annotations	1.0	null
mir210ship1akt	GeneRIF Biological Term Annotations	1.0	null
highly	GeneRIF Biological Term Annotations	1.0	null
irradiation	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
future	GeneRIF Biological Term Annotations	1.0	null
ulcerative	GeneRIF Biological Term Annotations	1.0	null
lmp2a	GeneRIF Biological Term Annotations	1.0	null
specifically	GeneRIF Biological Term Annotations	1.0	null
COV504	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16918
H3K9ac_Peripheral Blood Mononuclear Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
CTCF_fibroblast of upper leg skin_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
features	GeneRIF Biological Term Annotations	1.0	null
betacatenin	GeneRIF Biological Term Annotations	1.0	null
inhibit	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
biopsies	GeneRIF Biological Term Annotations	1.0	null
campfoxp3dependent	GeneRIF Biological Term Annotations	1.0	null
finally	GeneRIF Biological Term Annotations	1.0	null
decreased interleukin-4 secretion	MGI Mouse Phenotype Associations 2023	1.0	null
abnormal immune system organ morphology	MPO Gene-Phenotype Associations	1.0	null
H3K4me1_CH12.LX_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
integrity	GeneRIF Biological Term Annotations	1.0	null
Exhausted CD8+ T cell_Liver_Human	CellMarker Gene-Cell Type Associations	1.0	null
BECKER	CCLE Cell Line Gene CNV Profiles	1.0	1.36785
colon	GeneRIF Biological Term Annotations	1.0	null
vitro	GeneRIF Biological Term Annotations	1.0	null
kaplanmeier	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of lung_hg19_5	ENCODE Histone Modification Site Profiles	1.0	null
transplants	GeneRIF Biological Term Annotations	1.0	null
mice	GeneRIF Biological Term Annotations	1.0	null
cisplatinresistant	GeneRIF Biological Term Annotations	1.0	null
presence	GeneRIF Biological Term Annotations	1.0	null
immunopathological	GeneRIF Biological Term Annotations	1.0	null
subsequent	GeneRIF Biological Term Annotations	1.0	null
EP300_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNU1076	CCLE Cell Line Gene CNV Profiles	-1.0	-1.7521
lung inflammation	MPO Gene-Phenotype Associations	1.0	null
tumour	GeneRIF Biological Term Annotations	1.0	null
tgfbeta	GeneRIF Biological Term Annotations	1.0	null
RCOR1_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal leukocyte cell number	MPO Gene-Phenotype Associations	1.0	null
STAT3_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EGR1	ENCODE Transcription Factor Targets	1.0	null
bmpmediated	GeneRIF Biological Term Annotations	1.0	null
CUX1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
decreased mature b cell number	MPO Gene-Phenotype Associations	1.0	null
deficits	GeneRIF Biological Term Annotations	1.0	null
mir564	GeneRIF Biological Term Annotations	1.0	null
efficiently	GeneRIF Biological Term Annotations	1.0	null
HEL9217	CCLE Cell Line Gene CNV Profiles	1.0	2.66789
FOXM1_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
neoplastic	GeneRIF Biological Term Annotations	1.0	null
infectivity	GeneRIF Biological Term Annotations	1.0	null
ductal	GeneRIF Biological Term Annotations	1.0	null
crohns	GeneRIF Biological Term Annotations	1.0	null
set	GeneRIF Biological Term Annotations	1.0	null
VCAP	CCLE Cell Line Gene CNV Profiles	1.0	1.75243
regulator	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
STAT3_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
large	GeneRIF Biological Term Annotations	1.0	null
18812439-Table2	GeneSigDB Published Gene Signatures	1.0	null
strongly	GeneRIF Biological Term Annotations	1.0	null
impacting	GeneRIF Biological Term Annotations	1.0	null
decreased igg level	MPO Gene-Phenotype Associations	1.0	null
several	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
abnormal blood cell physiology	MPO Gene-Phenotype Associations	1.0	null
cebpbeta	GeneRIF Biological Term Annotations	1.0	null
ARID3A	ENCODE Transcription Factor Targets	1.0	null
significant	GeneRIF Biological Term Annotations	1.0	null
SIHA	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34195
H3K27ac_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
HS 936.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0279
malignant	GeneRIF Biological Term Annotations	1.0	null
formation	GeneRIF Biological Term Annotations	1.0	null
auxiliary	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_GM12866_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
transcription	GeneRIF Biological Term Annotations	1.0	null
decreased	GeneRIF Biological Term Annotations	1.0	null
lung cancer	GAD Gene-Disease Associations	1.0	null
Anemia	CTD Gene-Disease Associations	1.0	1.01549
glioma	GeneRIF Biological Term Annotations	1.0	null
CTCF_A549_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
waldenstroms	GeneRIF Biological Term Annotations	1.0	null
negativefeedback	GeneRIF Biological Term Annotations	1.0	null
PBX3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hepatitis	GeneRIF Biological Term Annotations	1.0	null
FOXM1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lymphoma	GeneRIF Biological Term Annotations	1.0	null
abnormal cd4-positive, alpha-beta t cell physiology	MPO Gene-Phenotype Associations	1.0	null
multistep	GeneRIF Biological Term Annotations	1.0	null
upregulated	GeneRIF Biological Term Annotations	1.0	null
CTCF_spleen_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
independently	GeneRIF Biological Term Annotations	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886694
15284443-Table5	GeneSigDB Published Gene Signatures	1.0	null
hif1alphadependent	GeneRIF Biological Term Annotations	1.0	null
abnormal interleukin-10 secretion	MPO Gene-Phenotype Associations	1.0	null
peripheral	GeneRIF Biological Term Annotations	1.0	null
induced	GeneRIF Biological Term Annotations	1.0	null
hypoxia	GeneRIF Biological Term Annotations	1.0	null
mononuclear	GeneRIF Biological Term Annotations	1.0	null
rupture	GeneRIF Biological Term Annotations	1.0	null
apoptosispromoting	GeneRIF Biological Term Annotations	1.0	null
claudin1	GeneRIF Biological Term Annotations	1.0	null
lipopolysaccharides	GeneRIF Biological Term Annotations	1.0	null
transplantation	GeneRIF Biological Term Annotations	1.0	null
cutaneous	GeneRIF Biological Term Annotations	1.0	null
SIN3A_PFSK-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
capacity	GeneRIF Biological Term Annotations	1.0	null
hif1alpha	GeneRIF Biological Term Annotations	1.0	null
flt3	GeneRIF Biological Term Annotations	1.0	null
suggested	GeneRIF Biological Term Annotations	1.0	null
POLR2A_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
highgrade	GeneRIF Biological Term Annotations	1.0	null
activities	GeneRIF Biological Term Annotations	1.0	null
iii	GeneRIF Biological Term Annotations	1.0	null
STAT3	ChEA Transcription Factor Targets	1.0	null
EBF1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
dynamic	GeneRIF Biological Term Annotations	1.0	null
increased inflammatory response	MPO Gene-Phenotype Associations	1.0	null
downregulates	GeneRIF Biological Term Annotations	1.0	null
abnormal spleen morphology	MPO Gene-Phenotype Associations	1.0	null
host	GeneRIF Biological Term Annotations	1.0	null
conventional	GeneRIF Biological Term Annotations	1.0	null
NCI-H146	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836825
PANC0213	CCLE Cell Line Gene CNV Profiles	-1.0	-1.4992
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.22979
virusinfected	GeneRIF Biological Term Annotations	1.0	null
events	GeneRIF Biological Term Annotations	1.0	null
EGR1_HCT116_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ntreg	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
POLR2A_GM18951_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mesenchymal	GeneRIF Biological Term Annotations	1.0	null
cd154	GeneRIF Biological Term Annotations	1.0	null
HCC4017	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.40354
modulate	GeneRIF Biological Term Annotations	1.0	null
protein1	GeneRIF Biological Term Annotations	1.0	null
highlight	GeneRIF Biological Term Annotations	1.0	null
abnormal cd4-positive, alpha beta t cell number	MPO Gene-Phenotype Associations	1.0	null
OVKATE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71446
DOV13	CCLE Cell Line Gene CNV Profiles	1.0	1.54965
nephropathy	GeneRIF Biological Term Annotations	1.0	null
EP300_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WRNIP1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Renal Insufficiency	CTD Gene-Disease Associations	1.0	1.1461
mrnas	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ck1alpha	GeneRIF Biological Term Annotations	1.0	null
altered	GeneRIF Biological Term Annotations	1.0	null
ETS1	ENCODE Transcription Factor Targets	1.0	null
start	GeneRIF Biological Term Annotations	1.0	null
decreased tumor necrosis factor secretion	MGI Mouse Phenotype Associations 2023	1.0	null
antiviral	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
observed	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_B cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
hcc	GeneRIF Biological Term Annotations	1.0	null
result	GeneRIF Biological Term Annotations	1.0	null
ifngamma	GeneRIF Biological Term Annotations	1.0	null
SET-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.86705
mir1552	GeneRIF Biological Term Annotations	1.0	null
more	GeneRIF Biological Term Annotations	1.0	null
explained	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K27ac_Duodenum Smooth Muscle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
dense	GeneRIF Biological Term Annotations	1.0	null
STAT5A_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
indicating	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
rodentium	GeneRIF Biological Term Annotations	1.0	null
cytokines	GeneRIF Biological Term Annotations	1.0	null
aid	GeneRIF Biological Term Annotations	1.0	null
abnormal tumor necrosis factor secretion	MPO Gene-Phenotype Associations	1.0	null
Hyperplasia	CTD Gene-Disease Associations	1.0	1.22979
control	GeneRIF Biological Term Annotations	1.0	null
specificity	GeneRIF Biological Term Annotations	1.0	null
pathologic	GeneRIF Biological Term Annotations	1.0	null
abnormal respiratory conducting tube morphology	MPO Gene-Phenotype Associations	1.0	null
authors	GeneRIF Biological Term Annotations	1.0	null
hepatoma	GeneRIF Biological Term Annotations	1.0	null
biomarker	GeneRIF Biological Term Annotations	1.0	null
ets_00000000_2008_ovarian_cancer_cells_gof_human_gpl6244_gse21129	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.232056
clinical	GeneRIF Biological Term Annotations	1.0	null
CTCF_B cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mucosal	GeneRIF Biological Term Annotations	1.0	null
derived	GeneRIF Biological Term Annotations	1.0	null
lichen	GeneRIF Biological Term Annotations	1.0	null
without	GeneRIF Biological Term Annotations	1.0	null
H2AFZ	ENCODE Transcription Factor Targets	1.0	null
silence	GeneRIF Biological Term Annotations	1.0	null
HCC2885	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26559
proteinbeta	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_Adipose Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
those	GeneRIF Biological Term Annotations	1.0	null
transcriptional	GeneRIF Biological Term Annotations	1.0	null
STAT3_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
demonstrates	GeneRIF Biological Term Annotations	1.0	null
ATF3-23680149-GBM1-GSC-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
eGFP-JUNB_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PML	ENCODE Transcription Factor Targets	1.0	null
REST_PFSK-1_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
postliver	GeneRIF Biological Term Annotations	1.0	null
increased susceptibility to bacterial infection	MGI Mouse Phenotype Associations 2023	1.0	null
Fibrosis	CTD Gene-Disease Associations	1.0	1.26794
H3K27ac_thymus_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_CH12.LX_mm9_4	ENCODE Histone Modification Site Profiles	1.0	null
similar	GeneRIF Biological Term Annotations	1.0	null
aberrations	GeneRIF Biological Term Annotations	1.0	null
majority	GeneRIF Biological Term Annotations	1.0	null
CTCF_GM12872_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mycobacterium	GeneRIF Biological Term Annotations	1.0	null
neuroendocrine	GeneRIF Biological Term Annotations	1.0	null
abnormal interleukin-4 secretion	MPO Gene-Phenotype Associations	1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
whose	GeneRIF Biological Term Annotations	1.0	null
NUGC-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26559
abnormal humoral immune response	MPO Gene-Phenotype Associations	1.0	null
H2AFZ_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCI-H2810	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901417
antidsdna	GeneRIF Biological Term Annotations	1.0	null
avenues	GeneRIF Biological Term Annotations	1.0	null
rectal	GeneRIF Biological Term Annotations	1.0	null
helicobacter	GeneRIF Biological Term Annotations	1.0	null
gfi1b_22201127_amulv_gof_mouse_gpl6246_gds4302	GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations	-1.0	-0.671447
RT-112	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.56639
H3K4me3_fibroblast of pulmonary artery_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
TALL1	CCLE Cell Line Gene CNV Profiles	1.0	2.86955
TEAD4	ENCODE Transcription Factor Targets	1.0	null
cellular	GeneRIF Biological Term Annotations	1.0	null
significance	GeneRIF Biological Term Annotations	1.0	null
severely	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
lpsinduced	GeneRIF Biological Term Annotations	1.0	null
mirk1211	GeneRIF Biological Term Annotations	1.0	null
abnormalities	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_thymus_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49791
bloodderived	GeneRIF Biological Term Annotations	1.0	null
inhibitory	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of pedal digit skin_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
abnormal T-helper 17 cell differentiation	MGI Mouse Phenotype Associations 2023	1.0	null
abnormal lung morphology	MPO Gene-Phenotype Associations	1.0	null
mir155mediated	GeneRIF Biological Term Annotations	1.0	null
ZBTB33_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
survival	GeneRIF Biological Term Annotations	1.0	null
olt	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of gingiva_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H2AFZ_CD14-positive monocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
direct	GeneRIF Biological Term Annotations	1.0	null
MEF2A_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mirnainteractions	GeneRIF Biological Term Annotations	1.0	null
facilitates	GeneRIF Biological Term Annotations	1.0	null
preintegration	GeneRIF Biological Term Annotations	1.0	null
sex	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RUNX3	ENCODE Transcription Factor Targets	1.0	null
cardiomyogenic	GeneRIF Biological Term Annotations	1.0	null
abnormal respiratory system morphology	MPO Gene-Phenotype Associations	1.0	null
CTCF_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HS 940.T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26672
including	GeneRIF Biological Term Annotations	1.0	null
eGFP-JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
group	GeneRIF Biological Term Annotations	1.0	null
ventricular	GeneRIF Biological Term Annotations	1.0	null
NCI-N417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.946866
FOXM1	ENCODE Transcription Factor Targets	1.0	null
H2BK20ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
seen	GeneRIF Biological Term Annotations	1.0	null
alpha1	GeneRIF Biological Term Annotations	1.0	null
approximately	GeneRIF Biological Term Annotations	1.0	null
fate	GeneRIF Biological Term Annotations	1.0	null
near	GeneRIF Biological Term Annotations	1.0	null
dysregulation	GeneRIF Biological Term Annotations	1.0	null
PA-TU-8902	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.26559
TCF3	ENCODE Transcription Factor Targets	1.0	null
TAF1	ENCODE Transcription Factor Targets	1.0	null
stenotic	GeneRIF Biological Term Annotations	1.0	null
kinasenegative	GeneRIF Biological Term Annotations	1.0	null
juice	GeneRIF Biological Term Annotations	1.0	null
VMRCLCD	CCLE Cell Line Gene CNV Profiles	-1.0	-1.75675
key	GeneRIF Biological Term Annotations	1.0	null
mechanical	GeneRIF Biological Term Annotations	1.0	null
mir145	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_CD8 Memory Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
ets1	GeneRIF Biological Term Annotations	1.0	null
CTCF_SK-N-SH_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal igg level	MPO Gene-Phenotype Associations	1.0	null
H3K9ac_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
proliferation	GeneRIF Biological Term Annotations	1.0	null
abnormal peyer's patch germinal center morphology	MPO Gene-Phenotype Associations	1.0	null
confers	GeneRIF Biological Term Annotations	1.0	null
stimuli	GeneRIF Biological Term Annotations	1.0	null
JUND_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
differentiation	GeneRIF Biological Term Annotations	1.0	null
CTCF_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
therapeutic	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_neural cell_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAX_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
KHM-1B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.64775
nervous	GeneRIF Biological Term Annotations	1.0	null
their	GeneRIF Biological Term Annotations	1.0	null
antihiv1	GeneRIF Biological Term Annotations	1.0	null
angiotensin	GeneRIF Biological Term Annotations	1.0	null
correlated	GeneRIF Biological Term Annotations	1.0	null
POLR2A_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
disorders	GeneRIF Biological Term Annotations	1.0	null
abnormal immune system physiology	MGI Mouse Phenotype Associations 2023	1.0	null
critical	GeneRIF Biological Term Annotations	1.0	null
antigen	GeneRIF Biological Term Annotations	1.0	null
invasion	GeneRIF Biological Term Annotations	1.0	null
KDM1A	ENCODE Transcription Factor Targets	1.0	null
restored	GeneRIF Biological Term Annotations	1.0	null
20054351-Table2	GeneSigDB Published Gene Signatures	1.0	null
pathology	GeneRIF Biological Term Annotations	1.0	null
fluid	GeneRIF Biological Term Annotations	1.0	null
needle	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_CH12.LX_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
H3K9ac_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
biogenesis	GeneRIF Biological Term Annotations	1.0	null
homologue	GeneRIF Biological Term Annotations	1.0	null
homology2	GeneRIF Biological Term Annotations	1.0	null
decreased igm level	MPO Gene-Phenotype Associations	1.0	null
ELF1	ENCODE Transcription Factor Targets	1.0	null
borrmann	GeneRIF Biological Term Annotations	1.0	null
mir148a	GeneRIF Biological Term Annotations	1.0	null
smad2	GeneRIF Biological Term Annotations	1.0	null
MHHCALL2	CCLE Cell Line Gene CNV Profiles	1.0	1.72358
screened	GeneRIF Biological Term Annotations	1.0	null
abnormal leukopoiesis	MPO Gene-Phenotype Associations	1.0	null
blood	GeneRIF Biological Term Annotations	1.0	null
oral	GeneRIF Biological Term Annotations	1.0	null
huvec	GeneRIF Biological Term Annotations	1.0	null
pigment	GeneRIF Biological Term Annotations	1.0	null
abnormal mononuclear cell morphology	MPO Gene-Phenotype Associations	1.0	null
abnormal hematopoietic cell number	MPO Gene-Phenotype Associations	1.0	null
H3K4me1_bone marrow macrophage_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
downs	GeneRIF Biological Term Annotations	1.0	null
abnormal germinal center B cell physiology	MGI Mouse Phenotype Associations 2023	1.0	null
abnormal t cell physiology	MPO Gene-Phenotype Associations	1.0	null
negatively	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_foreskin fibroblast_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	1.62713
melanoma	GeneRIF Biological Term Annotations	1.0	null
strong	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_MEL cell line_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
linear	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
lymphocytic	GeneRIF Biological Term Annotations	1.0	null
16651414-Supp3	GeneSigDB Published Gene Signatures	1.0	null
ikbke	GeneRIF Biological Term Annotations	1.0	null
NCI-H847	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961067
H3K27ac_Mobilized CD34 Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
physiological	GeneRIF Biological Term Annotations	1.0	null
deaminations	GeneRIF Biological Term Annotations	1.0	null
dna	GeneRIF Biological Term Annotations	1.0	null
neuroinflammatory	GeneRIF Biological Term Annotations	1.0	null
upregulates	GeneRIF Biological Term Annotations	1.0	null
activated	GeneRIF Biological Term Annotations	1.0	null
abnormal hematopoiesis	MPO Gene-Phenotype Associations	1.0	null
constitutively	GeneRIF Biological Term Annotations	1.0	null
ophthalmopathy	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
potentiate	GeneRIF Biological Term Annotations	1.0	null
proximal	GeneRIF Biological Term Annotations	1.0	null
HCC1500	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0279
casein	GeneRIF Biological Term Annotations	1.0	null
RMUG-S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38444
cytoprotective	GeneRIF Biological Term Annotations	1.0	null
HNF4	MotifMap Predicted Transcription Factor Targets	1.0	null
at1r	GeneRIF Biological Term Annotations	1.0	null
crucially	GeneRIF Biological Term Annotations	1.0	null
processes	GeneRIF Biological Term Annotations	1.0	null
extensive	GeneRIF Biological Term Annotations	1.0	null
PML_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
vascular	GeneRIF Biological Term Annotations	1.0	null
hmscs	GeneRIF Biological Term Annotations	1.0	null
deregulation	GeneRIF Biological Term Annotations	1.0	null
only	GeneRIF Biological Term Annotations	1.0	null
Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.20978
SFPI1-20887958-HPC-7-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
toward	GeneRIF Biological Term Annotations	1.0	null
nonmalignant	GeneRIF Biological Term Annotations	1.0	null
arrest	GeneRIF Biological Term Annotations	1.0	null
validated	GeneRIF Biological Term Annotations	1.0	null
endometrial	GeneRIF Biological Term Annotations	1.0	null
research	GeneRIF Biological Term Annotations	1.0	null
consequent	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
death	GeneRIF Biological Term Annotations	1.0	null
way	GeneRIF Biological Term Annotations	1.0	null
GATA3	ENCODE Transcription Factor Targets	1.0	null
cll	GeneRIF Biological Term Annotations	1.0	null
negative	GeneRIF Biological Term Annotations	1.0	null
tolerance	GeneRIF Biological Term Annotations	1.0	null
mir200	GeneRIF Biological Term Annotations	1.0	null
decreased lymphocyte cell number	MPO Gene-Phenotype Associations	1.0	null
miR-targeted genes in muscle cell - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
EP300_GM12878_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mirna222	GeneRIF Biological Term Annotations	1.0	null
Neoplasm Metastasis	CTD Gene-Disease Associations	1.0	2.88009
decreased hematopoietic cell number	MPO Gene-Phenotype Associations	1.0	null
MAFK_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
threshold	GeneRIF Biological Term Annotations	1.0	null
RL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.26672
RMUGS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.42241
predictive	GeneRIF Biological Term Annotations	1.0	null
osteoarthritis	GeneRIF Biological Term Annotations	1.0	null
thyroid	GeneRIF Biological Term Annotations	1.0	null
42MGBA	CCLE Cell Line Gene CNV Profiles	1.0	1.62702
PL45	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33235
microbial	GeneRIF Biological Term Annotations	1.0	null
FOSL2_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
expressional	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
TCF12_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
GATA3_SH-SY5Y_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
molecular	GeneRIF Biological Term Annotations	1.0	null
monoclonal	GeneRIF Biological Term Annotations	1.0	null
ZBTB33_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
appears	GeneRIF Biological Term Annotations	1.0	null
evidence	GeneRIF Biological Term Annotations	1.0	null
FOS_MCF 10A_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IKZF1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
rad51	GeneRIF Biological Term Annotations	1.0	null
IPC-298	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.3047
SETDB1	ENCODE Transcription Factor Targets	1.0	null
SPI1	ENCODE Transcription Factor Targets	1.0	null
MAFK_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
microsatellite	GeneRIF Biological Term Annotations	1.0	null
abnormal dendritic cell physiology	MPO Gene-Phenotype Associations	1.0	null
Liver Diseases	CTD Gene-Disease Associations	1.0	1.15593
ctcl	GeneRIF Biological Term Annotations	1.0	null
mir132	GeneRIF Biological Term Annotations	1.0	null
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.12083
inflammation	GeneRIF Biological Term Annotations	1.0	null
acetylcholine	GeneRIF Biological Term Annotations	1.0	null
JUN_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
deregulated	GeneRIF Biological Term Annotations	1.0	null
CEBPB_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ship1	GeneRIF Biological Term Annotations	1.0	null
ETS1_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_GM12873_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.885907
H3K4me2_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H2AFZ_A549_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HDLM2	CCLE Cell Line Gene CNV Profiles	-1.0	-1.71277
POLR2A_GM19099_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
ascribed	GeneRIF Biological Term Annotations	1.0	null
combining	GeneRIF Biological Term Annotations	1.0	null
20028859-TableS2	GeneSigDB Published Gene Signatures	1.0	null
mir16	GeneRIF Biological Term Annotations	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.34459
biomarkers	GeneRIF Biological Term Annotations	1.0	null
CTCF_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
socs1	GeneRIF Biological Term Annotations	1.0	null
ZNF143	ENCODE Transcription Factor Targets	1.0	null
RT11284	CCLE Cell Line Gene CNV Profiles	1.0	1.41379
context	GeneRIF Biological Term Annotations	1.0	null
failure	GeneRIF Biological Term Annotations	1.0	null
mir3355p	GeneRIF Biological Term Annotations	1.0	null
viral	GeneRIF Biological Term Annotations	1.0	null
Atherosclerosis	CTD Gene-Disease Associations	1.0	1.10562
provides	GeneRIF Biological Term Annotations	1.0	null
mmp2	GeneRIF Biological Term Annotations	1.0	null
18716133-TableS1	GeneSigDB Published Gene Signatures	1.0	null
Lymphoma, Non-Hodgkin	HuGE Navigator Gene-Phenotype Associations	1.0	null
ELK1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
depletion	GeneRIF Biological Term Annotations	1.0	null
contributes	GeneRIF Biological Term Annotations	1.0	null
p53	GeneRIF Biological Term Annotations	1.0	null
impairment	GeneRIF Biological Term Annotations	1.0	null
maturation	GeneRIF Biological Term Annotations	1.0	null
complement	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_megakaryocyte_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
telomere	GeneRIF Biological Term Annotations	1.0	null
foxo3a	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
mir200c	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H1694	COSMIC Cell Line Gene CNV Profiles	1.0	2.15316
mir155hg	GeneRIF Biological Term Annotations	1.0	null
autoimmunity	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
mirna196b	GeneRIF Biological Term Annotations	1.0	null
KDM5A	ENCODE Transcription Factor Targets	1.0	null
abnormal blood cell morphology/development	MPO Gene-Phenotype Associations	1.0	null
downregulating	GeneRIF Biological Term Annotations	1.0	null
vasorelaxation	GeneRIF Biological Term Annotations	1.0	null
lymphocytosis	GeneRIF Biological Term Annotations	1.0	null
LOX-IMVI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.970947
murine	GeneRIF Biological Term Annotations	1.0	null
circulating	GeneRIF Biological Term Annotations	1.0	null
mbl	GeneRIF Biological Term Annotations	1.0	null
TBL1XR1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
identify	GeneRIF Biological Term Annotations	1.0	null
polymorphism	GeneRIF Biological Term Annotations	1.0	null
precursor	GeneRIF Biological Term Annotations	1.0	null
CTCF_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
elevating	GeneRIF Biological Term Annotations	1.0	null
abnormal lymphocyte cell number	MPO Gene-Phenotype Associations	1.0	null
decreased germinal center B cell number	MGI Mouse Phenotype Associations 2023	1.0	null
abnormal germinal center b cell morphology	MPO Gene-Phenotype Associations	1.0	null
misregulated	GeneRIF Biological Term Annotations	1.0	null
macrophagemediated	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_B cell_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
metastasis	GeneRIF Biological Term Annotations	1.0	null
malignancy	GeneRIF Biological Term Annotations	1.0	null
ZR7530	CCLE Cell Line Gene CNV Profiles	-1.0	-3.20396
H3K4me3_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_fibroblast of lung_hg19_7	ENCODE Histone Modification Site Profiles	1.0	null
EGR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
rna	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of lung_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
induction	GeneRIF Biological Term Annotations	1.0	null
involving	GeneRIF Biological Term Annotations	1.0	null
CMK115	CCLE Cell Line Gene CNV Profiles	1.0	2.2348
tcell	GeneRIF Biological Term Annotations	1.0	null
downmodulates	GeneRIF Biological Term Annotations	1.0	null
overexpressing	GeneRIF Biological Term Annotations	1.0	null
stimulatory	GeneRIF Biological Term Annotations	1.0	null
myocarditis	GeneRIF Biological Term Annotations	1.0	null
jarid2	GeneRIF Biological Term Annotations	1.0	null
implicates	GeneRIF Biological Term Annotations	1.0	null
IRF1	ENCODE Transcription Factor Targets	1.0	null
STAT5A	ENCODE Transcription Factor Targets	1.0	null
mir155ets1	GeneRIF Biological Term Annotations	1.0	null
mirna155mediated	GeneRIF Biological Term Annotations	1.0	null
melanocytic	GeneRIF Biological Term Annotations	1.0	null
increased T-helper 2 cell number	MGI Mouse Phenotype Associations 2023	1.0	null
H3K36me3_spleen_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
transcripts	GeneRIF Biological Term Annotations	1.0	null
MC116	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.44074
H3K27ac_spleen_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
resected	GeneRIF Biological Term Annotations	1.0	null
mir182	GeneRIF Biological Term Annotations	1.0	null
multiple	GeneRIF Biological Term Annotations	1.0	null
abnormal spleen b cell follicle morphology	MPO Gene-Phenotype Associations	1.0	null
cd10	GeneRIF Biological Term Annotations	1.0	null
number	GeneRIF Biological Term Annotations	1.0	null
increased lymphocyte cell number	MPO Gene-Phenotype Associations	1.0	null
systemic	GeneRIF Biological Term Annotations	1.0	null
SIN3A_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH1694	CCLE Cell Line Gene CNV Profiles	1.0	2.06417
UM-UC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38978
POLR2AphosphoS5_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
E2F4	ENCODE Transcription Factor Targets	1.0	null
immunityreview	GeneRIF Biological Term Annotations	1.0	null
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.27347
act	GeneRIF Biological Term Annotations	1.0	null
angiogenesis	GeneRIF Biological Term Annotations	1.0	null
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.836943
process	GeneRIF Biological Term Annotations	1.0	null
POLR2A_GM12892_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
protective	GeneRIF Biological Term Annotations	1.0	null
hiv1	GeneRIF Biological Term Annotations	1.0	null
CAKI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05436
CEBPB	ENCODE Transcription Factor Targets	1.0	null
mir93	GeneRIF Biological Term Annotations	1.0	null
exerts	GeneRIF Biological Term Annotations	1.0	null
mildly	GeneRIF Biological Term Annotations	1.0	null
taenia	GeneRIF Biological Term Annotations	1.0	null
Carcinoma, Non-Small-Cell Lung	HuGE Navigator Gene-Phenotype Associations	1.0	null
potentially	GeneRIF Biological Term Annotations	1.0	null
repair	GeneRIF Biological Term Annotations	1.0	null
CHD2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RAD21_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
organism	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
NCI-N87	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42892
TUHR10TKB	CCLE Cell Line Gene CNV Profiles	1.0	1.61251
POLR2A_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
myasthenia	GeneRIF Biological Term Annotations	1.0	null
mirna155	GeneRIF Biological Term Annotations	1.0	null
18478077-Table2a	GeneSigDB Published Gene Signatures	1.0	null
HCC2279	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.884181
Peripheral Nervous System Diseases	CTD Gene-Disease Associations	1.0	1.02225
jmjd1a	GeneRIF Biological Term Annotations	1.0	null
ortholog	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_GM12864_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
promoting	GeneRIF Biological Term Annotations	1.0	null
DETROIT 562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836825
enos	GeneRIF Biological Term Annotations	1.0	null
POLR2A_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
condition	GeneRIF Biological Term Annotations	1.0	null
Weight Loss	CTD Gene-Disease Associations	1.0	1.35821
PA-TU-8988T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.886694
pathophysiology	GeneRIF Biological Term Annotations	1.0	null
cvb3	GeneRIF Biological Term Annotations	1.0	null
decreased IgM level	MGI Mouse Phenotype Associations 2023	1.0	null
cystic	GeneRIF Biological Term Annotations	1.0	null
abnormal spleen secondary b follicle morphology	MPO Gene-Phenotype Associations	1.0	null
increased susceptibility to infection	MPO Gene-Phenotype Associations	1.0	null
immortalization	GeneRIF Biological Term Annotations	1.0	null
dermal	GeneRIF Biological Term Annotations	1.0	null
SETDB1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TCF12_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal lung morphology	MGI Mouse Phenotype Associations 2023	1.0	null
EZH2_myotube_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MDA-MB-415	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.953527
HOXC9-25013753-NEUROBLASTOMA BE2-C-HUMAN	ChEA Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
abnormal digestive system physiology	MPO Gene-Phenotype Associations	1.0	null
NTERA-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.79893
down	GeneRIF Biological Term Annotations	1.0	null
generalized	GeneRIF Biological Term Annotations	1.0	null
linked	GeneRIF Biological Term Annotations	1.0	null
camptothecin	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
gbs	GeneRIF Biological Term Annotations	1.0	null
progenitor	GeneRIF Biological Term Annotations	1.0	null
enter	GeneRIF Biological Term Annotations	1.0	null
POU2F2_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
HCC1534	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.7533
mir424	GeneRIF Biological Term Annotations	1.0	null
burkitt	GeneRIF Biological Term Annotations	1.0	null
mirna155foxo3a	GeneRIF Biological Term Annotations	1.0	null
ebv	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_Jurkat_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
preeclampsia	GeneRIF Biological Term Annotations	1.0	null
epithelium	GeneRIF Biological Term Annotations	1.0	null
MOLM-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22193
internal	GeneRIF Biological Term Annotations	1.0	null
FOSL1	ENCODE Transcription Factor Targets	1.0	null
contribute	GeneRIF Biological Term Annotations	1.0	null
retinal	GeneRIF Biological Term Annotations	1.0	null
H4K20me1_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me1_CD8 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
abnormal leukocyte morphology	MPO Gene-Phenotype Associations	1.0	null
microrna	GeneRIF Biological Term Annotations	1.0	null
Albuminuria	CTD Gene-Disease Associations	1.0	2.88009
ligamentum	GeneRIF Biological Term Annotations	1.0	null
ZNF384_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH2106	CCLE Cell Line Gene CNV Profiles	1.0	1.74502
H3K4me3_GM12878_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
adverse	GeneRIF Biological Term Annotations	1.0	null
abnormal cell physiology	MPO Gene-Phenotype Associations	1.0	null
Precancerous Conditions	CTD Gene-Disease Associations	1.0	1.07911
16651414-Supp2	GeneSigDB Published Gene Signatures	1.0	null
Lung Neoplasms	HuGE Navigator Gene-Phenotype Associations	1.0	null
NCI-H446	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901417
H3K27ac_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
cisplatin	GeneRIF Biological Term Annotations	1.0	null
POLR2A_GM19193_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mutator	GeneRIF Biological Term Annotations	1.0	null
ics	GeneRIF Biological Term Annotations	1.0	null
decreased susceptibility to experimental autoimmune encephalomyelitis	MGI Mouse Phenotype Associations 2023	1.0	null
16818636-TableS3	GeneSigDB Published Gene Signatures	1.0	null
tumorigenesis	GeneRIF Biological Term Annotations	1.0	null
myb	GeneRIF Biological Term Annotations	1.0	null
mir326	GeneRIF Biological Term Annotations	1.0	null
YY1_GM12892_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
rejection	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
experimental	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_Jurkat_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_fibroblast of the aortic adventitia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
STAT1	ENCODE Transcription Factor Targets	1.0	null
CTCF_choroid plexus epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
altered susceptibility to infection	MPO Gene-Phenotype Associations	1.0	null
Fatty Liver	CTD Gene-Disease Associations	1.0	1.47322
Kidney Tubular Necrosis, Acute	CTD Gene-Disease Associations	1.0	1.02188
Hematopoietic Stem Cell Differentiation(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
pten	GeneRIF Biological Term Annotations	1.0	null
highstage	GeneRIF Biological Term Annotations	1.0	null
EZH2_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
risk	GeneRIF Biological Term Annotations	1.0	null
Liver Cirrhosis, Experimental	CTD Gene-Disease Associations	1.0	1.2208
CREB1	ENCODE Transcription Factor Targets	1.0	null
ZR-75-30	COSMIC Cell Line Gene CNV Profiles	-1.0	-3.24687
Cardiovascular Diseases	CTD Gene-Disease Associations	1.0	1.05461
state	GeneRIF Biological Term Annotations	1.0	null
infectious	GeneRIF Biological Term Annotations	1.0	null
determined	GeneRIF Biological Term Annotations	1.0	null
demonstrating	GeneRIF Biological Term Annotations	1.0	null
suppress	GeneRIF Biological Term Annotations	1.0	null
ZNF384_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
translation	GeneRIF Biological Term Annotations	1.0	null
lymph	GeneRIF Biological Term Annotations	1.0	null
stem	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
pressure	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CHD1	ENCODE Transcription Factor Targets	1.0	null
REST	ENCODE Transcription Factor Targets	1.0	null
Learning Disorders	CTD Gene-Disease Associations	1.0	1.50953
estradiol	GeneRIF Biological Term Annotations	1.0	null
rituximabinduced	GeneRIF Biological Term Annotations	1.0	null
crassiceps	GeneRIF Biological Term Annotations	1.0	null
profiles	GeneRIF Biological Term Annotations	1.0	null
COLO320	CCLE Cell Line Gene CNV Profiles	-1.0	-2.19975
selected	GeneRIF Biological Term Annotations	1.0	null
leukemia	GeneRIF Biological Term Annotations	1.0	null
recent	GeneRIF Biological Term Annotations	1.0	null
apoptosis	GeneRIF Biological Term Annotations	1.0	null
production	GeneRIF Biological Term Annotations	1.0	null
exosomal	GeneRIF Biological Term Annotations	1.0	null
reveals	GeneRIF Biological Term Annotations	1.0	null
a549	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_brain microvascular endothelial cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
micrornas	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_Brain Hippocampus Middle	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HOXC9	ChEA Transcription Factor Targets	1.0	null
demonstrate	GeneRIF Biological Term Annotations	1.0	null
HCC1493	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.01876
fibrosisassociated	GeneRIF Biological Term Annotations	1.0	null
kaposis	GeneRIF Biological Term Annotations	1.0	null
GR-M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.49791
especially	GeneRIF Biological Term Annotations	1.0	null
myd88	GeneRIF Biological Term Annotations	1.0	null
marker	GeneRIF Biological Term Annotations	1.0	null
abnormal lymphocyte physiology	MPO Gene-Phenotype Associations	1.0	null
breast	GeneRIF Biological Term Annotations	1.0	null
NCIH2122	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09121
H3K27ac_CD4 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
mir210	GeneRIF Biological Term Annotations	1.0	null
showing	GeneRIF Biological Term Annotations	1.0	null
predictors	GeneRIF Biological Term Annotations	1.0	null
adaptor	GeneRIF Biological Term Annotations	1.0	null
abnormal interferon secretion	MPO Gene-Phenotype Associations	1.0	null
BCL3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_Panc1_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
JUND_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hk2	GeneRIF Biological Term Annotations	1.0	null
migratory	GeneRIF Biological Term Annotations	1.0	null
19088021-supptable2	GeneSigDB Published Gene Signatures	1.0	null
cance	GeneRIF Biological Term Annotations	1.0	null
interleukin	GeneRIF Biological Term Annotations	1.0	null
Carcinoma, Hepatocellular	CTD Gene-Disease Associations	1.0	1.46041
susceptibility	GeneRIF Biological Term Annotations	1.0	null
s100p	GeneRIF Biological Term Annotations	1.0	null
SUPHD1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62257
effect	GeneRIF Biological Term Annotations	1.0	null
upstream	GeneRIF Biological Term Annotations	1.0	null
pivotal	GeneRIF Biological Term Annotations	1.0	null
bioinformatic	GeneRIF Biological Term Annotations	1.0	null
myocardial	GeneRIF Biological Term Annotations	1.0	null
TEAD4_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
literature	GeneRIF Biological Term Annotations	1.0	null
classification	GeneRIF Biological Term Annotations	1.0	null
GATA2	ENCODE Transcription Factor Targets	1.0	null
rheumatoid	GeneRIF Biological Term Annotations	1.0	null
Prenatal Injuries	CTD Gene-Disease Associations	1.0	1.39479
lmp1	GeneRIF Biological Term Annotations	1.0	null
system	GeneRIF Biological Term Annotations	1.0	null
receptorpositive	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
increased t-helper 2 cell number	MPO Gene-Phenotype Associations	1.0	null
CTCF_fibroblast of upper leg skin_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K9ac_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RXRA_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K27ac_skeletal muscle myoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
hashimotos	GeneRIF Biological Term Annotations	1.0	null
drives	GeneRIF Biological Term Annotations	1.0	null
adaptive	GeneRIF Biological Term Annotations	1.0	null
epsteinbarr	GeneRIF Biological Term Annotations	1.0	null
stability	GeneRIF Biological Term Annotations	1.0	null
abnormal t-helper 2 cell number	MPO Gene-Phenotype Associations	1.0	null
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RELA	ENCODE Transcription Factor Targets	1.0	null
Regulation of toll-like receptor signaling pathway(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
H3K4me3_WI38_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me3_GM12865_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
characteristic	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-468	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38978
enriched	GeneRIF Biological Term Annotations	1.0	null
leukemias	GeneRIF Biological Term Annotations	1.0	null
upregulating	GeneRIF Biological Term Annotations	1.0	null
related	GeneRIF Biological Term Annotations	1.0	null
affect	GeneRIF Biological Term Annotations	1.0	null
regulated	GeneRIF Biological Term Annotations	1.0	null
transfection	GeneRIF Biological Term Annotations	1.0	null
colonic	GeneRIF Biological Term Annotations	1.0	null
proliferative	GeneRIF Biological Term Annotations	1.0	null
intestinal	GeneRIF Biological Term Annotations	1.0	null
expansion	GeneRIF Biological Term Annotations	1.0	null
microribonucleic	GeneRIF Biological Term Annotations	1.0	null
promoted	GeneRIF Biological Term Annotations	1.0	null
examines	GeneRIF Biological Term Annotations	1.0	null
RELA_GM18505_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir20a	GeneRIF Biological Term Annotations	1.0	null
abnormal T-helper 1 cell morphology	MGI Mouse Phenotype Associations 2023	1.0	null
abdominal	GeneRIF Biological Term Annotations	1.0	null
stat3	GeneRIF Biological Term Annotations	1.0	null
domaincontaining	GeneRIF Biological Term Annotations	1.0	null
spleens	GeneRIF Biological Term Annotations	1.0	null
cml	GeneRIF Biological Term Annotations	1.0	null
shift	GeneRIF Biological Term Annotations	1.0	null
STAT3-18555785-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
let7a	GeneRIF Biological Term Annotations	1.0	null
mir125b	GeneRIF Biological Term Annotations	1.0	null
chc	GeneRIF Biological Term Annotations	1.0	null
vulvar	GeneRIF Biological Term Annotations	1.0	null
bbb	GeneRIF Biological Term Annotations	1.0	null
propose	GeneRIF Biological Term Annotations	1.0	null
oncogenic	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_U-87 MG_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUN_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
resulting	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_A549_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
acting	GeneRIF Biological Term Annotations	1.0	null
selection	GeneRIF Biological Term Annotations	1.0	null
TCF3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05516
benign	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_Penis Foreskin Fibroblast Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.935991
hematopoietic system phenotype	MPO Gene-Phenotype Associations	1.0	null
line	GeneRIF Biological Term Annotations	1.0	null
torpedo	GeneRIF Biological Term Annotations	1.0	null
lupus	GeneRIF Biological Term Annotations	1.0	null
activate	GeneRIF Biological Term Annotations	1.0	null
NCI-H2198	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.836943
antisense	GeneRIF Biological Term Annotations	1.0	null
A-431	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.33193
H2AFZ_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
chromosomal instability	MPO Gene-Phenotype Associations	1.0	null
abnormal cytokine secretion	MGI Mouse Phenotype Associations 2023	1.0	null
subtype	GeneRIF Biological Term Annotations	1.0	null
RXRA	ENCODE Transcription Factor Targets	1.0	null
JHH-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.842063
Hypercholesterolemia	CTD Gene-Disease Associations	1.0	1.04352
SQ1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.35211
carcioma	GeneRIF Biological Term Annotations	1.0	null
cytidine	GeneRIF Biological Term Annotations	1.0	null
mir150	GeneRIF Biological Term Annotations	1.0	null
secretome	GeneRIF Biological Term Annotations	1.0	null
essential	GeneRIF Biological Term Annotations	1.0	null
CTCF_fibroblast of gingiva_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
widespread	GeneRIF Biological Term Annotations	1.0	null
crescentic	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_K562_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MTA3	ENCODE Transcription Factor Targets	1.0	null
cocaine	GeneRIF Biological Term Annotations	1.0	null
Neoplasms	CTD Gene-Disease Associations	1.0	1.07732
19924232-TableS1	GeneSigDB Published Gene Signatures	1.0	null
silencing	GeneRIF Biological Term Annotations	1.0	null
c57bl6	GeneRIF Biological Term Annotations	1.0	null
mirs	GeneRIF Biological Term Annotations	1.0	null
fibrosis	GeneRIF Biological Term Annotations	1.0	null
pathogeninduced	GeneRIF Biological Term Annotations	1.0	null
aspiration	GeneRIF Biological Term Annotations	1.0	null
protects	GeneRIF Biological Term Annotations	1.0	null
mechanisms	GeneRIF Biological Term Annotations	1.0	null
mucinous	GeneRIF Biological Term Annotations	1.0	null
kinase	GeneRIF Biological Term Annotations	1.0	null
mxi1	GeneRIF Biological Term Annotations	1.0	null
ski	GeneRIF Biological Term Annotations	1.0	null
mir175p	GeneRIF Biological Term Annotations	1.0	null
nasopharyngeal	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K79me2_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
validation	GeneRIF Biological Term Annotations	1.0	null
genomic	GeneRIF Biological Term Annotations	1.0	null
altogether	GeneRIF Biological Term Annotations	1.0	null
japanese	GeneRIF Biological Term Annotations	1.0	null
cardiovascular	GeneRIF Biological Term Annotations	1.0	null
higher	GeneRIF Biological Term Annotations	1.0	null
BHLHE40_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_fibroblast of lung_hg19_6	ENCODE Histone Modification Site Profiles	1.0	null
nodules	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
tensin	GeneRIF Biological Term Annotations	1.0	null
monocytes	GeneRIF Biological Term Annotations	1.0	null
interruption	GeneRIF Biological Term Annotations	1.0	null
SNU387	CCLE Cell Line Gene CNV Profiles	-1.0	-1.74381
targets	GeneRIF Biological Term Annotations	1.0	null
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05516
replication	GeneRIF Biological Term Annotations	1.0	null
affecting	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
18955564-TableS2b	GeneSigDB Published Gene Signatures	1.0	null
Hypertension	CTD Gene-Disease Associations	1.0	1.10459
egfrnfkappab	GeneRIF Biological Term Annotations	1.0	null
phosphatase	GeneRIF Biological Term Annotations	1.0	null
KDM5A_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
malt	GeneRIF Biological Term Annotations	1.0	null
disc	GeneRIF Biological Term Annotations	1.0	null
repress	GeneRIF Biological Term Annotations	1.0	null
setting	GeneRIF Biological Term Annotations	1.0	null
decreased interferon-gamma secretion	MGI Mouse Phenotype Associations 2023	1.0	null
pseudomonas	GeneRIF Biological Term Annotations	1.0	null
marrow	GeneRIF Biological Term Annotations	1.0	null
NCI-H187	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08046
frequency	GeneRIF Biological Term Annotations	1.0	null
TBP_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Seizures	CTD Gene-Disease Associations	1.0	1.04051
decreased igg1 level	MPO Gene-Phenotype Associations	1.0	null
MAZ_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
shows	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_endothelial cell of umbilical vein_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
GATA3_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
signal	GeneRIF Biological Term Annotations	1.0	null
mouse	GeneRIF Biological Term Annotations	1.0	null
planus	GeneRIF Biological Term Annotations	1.0	null
resolution	GeneRIF Biological Term Annotations	1.0	null
reactivation	GeneRIF Biological Term Annotations	1.0	null
DB	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971873
GTL-16	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.56917
tat	GeneRIF Biological Term Annotations	1.0	null
HDAC1	ENCODE Transcription Factor Targets	1.0	null
cldn1	GeneRIF Biological Term Annotations	1.0	null
connected	GeneRIF Biological Term Annotations	1.0	null
correlates	GeneRIF Biological Term Annotations	1.0	null
adenocarcinoma	GeneRIF Biological Term Annotations	1.0	null
20490655-ST3	GeneSigDB Published Gene Signatures	1.0	null
heart	GeneRIF Biological Term Annotations	1.0	null
EZH2_H1-hESC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CFPAC-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.9004
neoplasms	GeneRIF Biological Term Annotations	1.0	null
EGR1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bronchial	GeneRIF Biological Term Annotations	1.0	null
POU2F2_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
socs1expression	GeneRIF Biological Term Annotations	1.0	null
postoperative	GeneRIF Biological Term Annotations	1.0	null
ras	GeneRIF Biological Term Annotations	1.0	null
downregulation	GeneRIF Biological Term Annotations	1.0	null
g0g1	GeneRIF Biological Term Annotations	1.0	null
antineoplastics	GeneRIF Biological Term Annotations	1.0	null
extent	GeneRIF Biological Term Annotations	1.0	null
allograft	GeneRIF Biological Term Annotations	1.0	null
bcell	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
membrane	GeneRIF Biological Term Annotations	1.0	null
KM-12	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.71446
factors	GeneRIF Biological Term Annotations	1.0	null
confirmed	GeneRIF Biological Term Annotations	1.0	null
when	GeneRIF Biological Term Annotations	1.0	null
immunotherapies	GeneRIF Biological Term Annotations	1.0	null
Adenocarcinoma	CTD Gene-Disease Associations	1.0	1.18554
intraductal	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
miR-targeted genes in lymphocytes - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
H2AFZ_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lesions	GeneRIF Biological Term Annotations	1.0	null
validates	GeneRIF Biological Term Annotations	1.0	null
CTCF_mammary epithelial cell_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal T cell physiology	MGI Mouse Phenotype Associations 2023	1.0	null
chromosomal instability	MGI Mouse Phenotype Associations 2023	1.0	null
CUX1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
skin	GeneRIF Biological Term Annotations	1.0	null
alterations	GeneRIF Biological Term Annotations	1.0	null
causing	GeneRIF Biological Term Annotations	1.0	null
DBTRG05MG	CCLE Cell Line Gene CNV Profiles	1.0	1.86182
provide	GeneRIF Biological Term Annotations	1.0	null
morphogenetic	GeneRIF Biological Term Annotations	1.0	null
IRF1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2BK120ac_IMR90	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
lung	GeneRIF Biological Term Annotations	1.0	null
node	GeneRIF Biological Term Annotations	1.0	null
relationship	GeneRIF Biological Term Annotations	1.0	null
CTCF_fibroblast of skin of abdomen_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
interacting	GeneRIF Biological Term Annotations	1.0	null
NCI-H2081	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00415
POLR2A_GM18505_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pdcd4	GeneRIF Biological Term Annotations	1.0	null
responses	GeneRIF Biological Term Annotations	1.0	null
SIN3A	ENCODE Transcription Factor Targets	1.0	null
mir155	GeneRIF Biological Term Annotations	1.0	null
decreased regulatory T cell number	MGI Mouse Phenotype Associations 2023	1.0	null
compared	GeneRIF Biological Term Annotations	1.0	null
represses	GeneRIF Biological Term Annotations	1.0	null
hep2	GeneRIF Biological Term Annotations	1.0	null
BCL11A_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
consequently	GeneRIF Biological Term Annotations	1.0	null
tretinoin_homo sapiens_gpl6244_gds4180	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
closely	GeneRIF Biological Term Annotations	1.0	null
MAX_NB4_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
action	GeneRIF Biological Term Annotations	1.0	null
capillary	GeneRIF Biological Term Annotations	1.0	null
even	GeneRIF Biological Term Annotations	1.0	null
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.77782
COV504	CCLE Cell Line Gene CNV Profiles	-1.0	-1.33293
ap1	GeneRIF Biological Term Annotations	1.0	null
diminished	GeneRIF Biological Term Annotations	1.0	null
mediating	GeneRIF Biological Term Annotations	1.0	null
antitumor	GeneRIF Biological Term Annotations	1.0	null
ELF1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
STAT1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
markedly	GeneRIF Biological Term Annotations	1.0	null
enables	GeneRIF Biological Term Annotations	1.0	null
mir361	GeneRIF Biological Term Annotations	1.0	null
STAT3	ENCODE Transcription Factor Targets	1.0	null
KAT2A_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PA-TU-8988S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.16918
H4K20me1_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RELA_GM18951_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cardiac	GeneRIF Biological Term Annotations	1.0	null
remodelling	GeneRIF Biological Term Annotations	1.0	null
loops	GeneRIF Biological Term Annotations	1.0	null
challenge	GeneRIF Biological Term Annotations	1.0	null
Memory Disorders	CTD Gene-Disease Associations	1.0	1.43428
single	GeneRIF Biological Term Annotations	1.0	null
tnfalpha	GeneRIF Biological Term Annotations	1.0	null
NIHOVCAR3	CCLE Cell Line Gene CNV Profiles	1.0	1.34345
cancerfree	GeneRIF Biological Term Annotations	1.0	null
progenitors	GeneRIF Biological Term Annotations	1.0	null
ARID3A_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
WRNIP1	ENCODE Transcription Factor Targets	1.0	null
H3K27ac_CD4 Memory Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
IKZF1	ENCODE Transcription Factor Targets	1.0	null
hormones	GeneRIF Biological Term Annotations	1.0	null
increased susceptibility to bacterial infection	MPO Gene-Phenotype Associations	1.0	null
H3K27ac_CD14-positive monocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
treatment	GeneRIF Biological Term Annotations	1.0	null
abnormal professional antigen presenting cell morphology	MPO Gene-Phenotype Associations	1.0	null
promote	GeneRIF Biological Term Annotations	1.0	null
dependency	GeneRIF Biological Term Annotations	1.0	null
apc	GeneRIF Biological Term Annotations	1.0	null
whole	GeneRIF Biological Term Annotations	1.0	null
EGR1_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal Peyer's patch germinal center morphology	MGI Mouse Phenotype Associations 2023	1.0	null
no abnormal phenotype detected	MGI Mouse Phenotype Associations 2023	1.0	null
H3K4me3_cardiac fibroblast_hg19_3	ENCODE Histone Modification Site Profiles	1.0	null
regions	GeneRIF Biological Term Annotations	1.0	null
Ovarian Neoplasms	CTD Gene-Disease Associations	1.0	1.40705
mmp16	GeneRIF Biological Term Annotations	1.0	null
RCOR1_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
others	GeneRIF Biological Term Annotations	1.0	null
processed	GeneRIF Biological Term Annotations	1.0	null
mir146b	GeneRIF Biological Term Annotations	1.0	null
syndromes	GeneRIF Biological Term Annotations	1.0	null
diffuse	GeneRIF Biological Term Annotations	1.0	null
candidate	GeneRIF Biological Term Annotations	1.0	null
Abnormalities, Drug-Induced	CTD Gene-Disease Associations	1.0	1.12737
CCNT2	ENCODE Transcription Factor Targets	1.0	null
H3K4me3_WI38_hg19_4	ENCODE Histone Modification Site Profiles	1.0	null
increased t cell number	MPO Gene-Phenotype Associations	1.0	null
cycle	GeneRIF Biological Term Annotations	1.0	null
decreased interferon-gamma secretion	MPO Gene-Phenotype Associations	1.0	null
oligonucleotide	GeneRIF Biological Term Annotations	1.0	null
BRCA1_HeLa-S3_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
miR-targeted genes in leukocytes - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
known	GeneRIF Biological Term Annotations	1.0	null
COV413A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.42892
relative	GeneRIF Biological Term Annotations	1.0	null
19837975-TableS1	GeneSigDB Published Gene Signatures	1.0	null
akt	GeneRIF Biological Term Annotations	1.0	null
MEF2C	ENCODE Transcription Factor Targets	1.0	null
mirna200a	GeneRIF Biological Term Annotations	1.0	null
increase	GeneRIF Biological Term Annotations	1.0	null
abnormal CD4-positive, alpha-beta T cell physiology	MGI Mouse Phenotype Associations 2023	1.0	null
molecule	GeneRIF Biological Term Annotations	1.0	null
origin	GeneRIF Biological Term Annotations	1.0	null
thymi	GeneRIF Biological Term Annotations	1.0	null
abnormal B cell physiology	MGI Mouse Phenotype Associations 2023	1.0	null
innate	GeneRIF Biological Term Annotations	1.0	null
individuals	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_megakaryocyte_mm9_3	ENCODE Histone Modification Site Profiles	1.0	null
HDAC1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
antigens	GeneRIF Biological Term Annotations	1.0	null
targeting	GeneRIF Biological Term Annotations	1.0	null
suppression	GeneRIF Biological Term Annotations	1.0	null
abnormal class switch recombination	MPO Gene-Phenotype Associations	1.0	null
PBX3	ENCODE Transcription Factor Targets	1.0	null
correlation	GeneRIF Biological Term Annotations	1.0	null
ho1	GeneRIF Biological Term Annotations	1.0	null
decreased germinal center b cell number	MPO Gene-Phenotype Associations	1.0	null
serve	GeneRIF Biological Term Annotations	1.0	null
MEF2C_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
promoter	GeneRIF Biological Term Annotations	1.0	null
BATF_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
osteosarcoma	GeneRIF Biological Term Annotations	1.0	null
JUND_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOSL1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_GM12891_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
antagonizes	GeneRIF Biological Term Annotations	1.0	null
cyr61	GeneRIF Biological Term Annotations	1.0	null
RUNX3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
severity	GeneRIF Biological Term Annotations	1.0	null
comparing	GeneRIF Biological Term Annotations	1.0	null
abnormal b cell number	MPO Gene-Phenotype Associations	1.0	null
FOS_MCF 10A_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
attenuating	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
program	GeneRIF Biological Term Annotations	1.0	null
Proteinuria	CTD Gene-Disease Associations	1.0	1.30421
confirms	GeneRIF Biological Term Annotations	1.0	null
inflammatory	GeneRIF Biological Term Annotations	1.0	null
abnormal germinal center b cell physiology	MPO Gene-Phenotype Associations	1.0	null
BHLHE40_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bacterial	GeneRIF Biological Term Annotations	1.0	null
mir143	GeneRIF Biological Term Annotations	1.0	null
CTCF_osteoblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
overexpressed	GeneRIF Biological Term Annotations	1.0	null
intestinal inflammation	MPO Gene-Phenotype Associations	1.0	null
sera	GeneRIF Biological Term Annotations	1.0	null
activator	GeneRIF Biological Term Annotations	1.0	null
hematopoiesis	GeneRIF Biological Term Annotations	1.0	null
MXI1	ENCODE Transcription Factor Targets	1.0	null
treg	GeneRIF Biological Term Annotations	1.0	null
repression	GeneRIF Biological Term Annotations	1.0	null
reducing	GeneRIF Biological Term Annotations	1.0	null
programmed	GeneRIF Biological Term Annotations	1.0	null
integration	GeneRIF Biological Term Annotations	1.0	null
one	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_B cell_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
outcome	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RAD21_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
suffering	GeneRIF Biological Term Annotations	1.0	null
EP300_GM12878_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
primary	GeneRIF Biological Term Annotations	1.0	null
huvecs	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_PFSK-1_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lymphatic	GeneRIF Biological Term Annotations	1.0	null
TBP	ENCODE Transcription Factor Targets	1.0	null
situ	GeneRIF Biological Term Annotations	1.0	null
abnormal cell-mediated immunity	MPO Gene-Phenotype Associations	1.0	null
H3K4me1_Neurosphere Cultured Cells Ganglionic Eminence Derived	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
POLR2A_GM12891_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RCOR1_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Glucose Intolerance	CTD Gene-Disease Associations	1.0	1.31837
population	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_mammary epithelial cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
diseases	GeneRIF Biological Term Annotations	1.0	null
abnormal leukocyte physiology	MPO Gene-Phenotype Associations	1.0	null
renal	GeneRIF Biological Term Annotations	1.0	null
MS751	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38362
H3K4me1_CH12.LX_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
pathways	GeneRIF Biological Term Annotations	1.0	null
temporally	GeneRIF Biological Term Annotations	1.0	null
preeclamptic	GeneRIF Biological Term Annotations	1.0	null
calculated	GeneRIF Biological Term Annotations	1.0	null
FOS_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2A_GM12878_hg19_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TEAD4_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
controls	GeneRIF Biological Term Annotations	1.0	null
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34195
wntbetacatenin	GeneRIF Biological Term Annotations	1.0	null
lymphomagenesis	GeneRIF Biological Term Annotations	1.0	null
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.83538
BRCA1	ENCODE Transcription Factor Targets	1.0	null
H3K4me3_fibroblast of upper leg skin_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
TEAD4_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
decreased b cell number	MPO Gene-Phenotype Associations	1.0	null
outcomes	GeneRIF Biological Term Annotations	1.0	null
abnormal t-helper 1 cell morphology	MPO Gene-Phenotype Associations	1.0	null
reduced	GeneRIF Biological Term Annotations	1.0	null
GATA3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_mononuclear cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
repressing	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
MHH-PREB-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.70582
GATA2_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cyclin	GeneRIF Biological Term Annotations	1.0	null
MYC_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inhibits	GeneRIF Biological Term Annotations	1.0	null
H3K4me2_fibroblast of lung_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
low	GeneRIF Biological Term Annotations	1.0	null
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.73938
fibroblasts	GeneRIF Biological Term Annotations	1.0	null
nfkappab	GeneRIF Biological Term Annotations	1.0	null
ramos	GeneRIF Biological Term Annotations	1.0	null
among	GeneRIF Biological Term Annotations	1.0	null
KM12	CCLE Cell Line Gene CNV Profiles	-1.0	-1.6701
carcinoid	GeneRIF Biological Term Annotations	1.0	null
POU2F2_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal b cell physiology	MPO Gene-Phenotype Associations	1.0	null
needed	GeneRIF Biological Term Annotations	1.0	null
mellitus	GeneRIF Biological Term Annotations	1.0	null
diabetic	GeneRIF Biological Term Annotations	1.0	null
abnormal immune system morphology	MPO Gene-Phenotype Associations	1.0	null
modulates	GeneRIF Biological Term Annotations	1.0	null
induces	GeneRIF Biological Term Annotations	1.0	null
GATA3_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cardiomyocyte	GeneRIF Biological Term Annotations	1.0	null
autocrine	GeneRIF Biological Term Annotations	1.0	null
EP300_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
miR-targeted genes in adipocytes - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
obesity	GeneRIF Biological Term Annotations	1.0	null
cd4	GeneRIF Biological Term Annotations	1.0	null
overall	GeneRIF Biological Term Annotations	1.0	null
estrogen	GeneRIF Biological Term Annotations	1.0	null
Lymphatic Metastasis	HuGE Navigator Gene-Phenotype Associations	1.0	null
player	GeneRIF Biological Term Annotations	1.0	null
EBF1	ENCODE Transcription Factor Targets	1.0	null
partly	GeneRIF Biological Term Annotations	1.0	null
ovarian	GeneRIF Biological Term Annotations	1.0	null
hcv	GeneRIF Biological Term Annotations	1.0	null
degeneration	GeneRIF Biological Term Annotations	1.0	null
TEF-1	MotifMap Predicted Transcription Factor Targets	1.0	null
letter	GeneRIF Biological Term Annotations	1.0	null
EP300_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me1_bone marrow_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
similarly	GeneRIF Biological Term Annotations	1.0	null
exogenous	GeneRIF Biological Term Annotations	1.0	null
neurotensin	GeneRIF Biological Term Annotations	1.0	null
surrounding	GeneRIF Biological Term Annotations	1.0	null
HEL	CCLE Cell Line Gene CNV Profiles	1.0	2.22034
graftversushost	GeneRIF Biological Term Annotations	1.0	null
abnormal igm level	MPO Gene-Phenotype Associations	1.0	null
prostate	GeneRIF Biological Term Annotations	1.0	null
CHD1_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
phenotype	GeneRIF Biological Term Annotations	1.0	null
lung inflammation	MGI Mouse Phenotype Associations 2023	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05436
th17	GeneRIF Biological Term Annotations	1.0	null
immune	GeneRIF Biological Term Annotations	1.0	null
KPL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38362
abnormal class switch recombination	MGI Mouse Phenotype Associations 2023	1.0	null
leading	GeneRIF Biological Term Annotations	1.0	null
kinasepositive	GeneRIF Biological Term Annotations	1.0	null
MYC_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
increasing	GeneRIF Biological Term Annotations	1.0	null
ZNF217_MCF-7_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
angiogenic	GeneRIF Biological Term Annotations	1.0	null
RCOR1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
homeostasis	GeneRIF Biological Term Annotations	1.0	null
mir146a	GeneRIF Biological Term Annotations	1.0	null
KYSE-140	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836825
PLCPRF5	CCLE Cell Line Gene CNV Profiles	1.0	1.42453
Fever	CTD Gene-Disease Associations	1.0	1.26298
cancerassociatedmesenchymal	GeneRIF Biological Term Annotations	1.0	null
RCOR1_IMR-90_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
bowel	GeneRIF Biological Term Annotations	1.0	null
CTCF_fibroblast of gingiva_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H3K4me3_Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
myelodysplastic	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
plasma	GeneRIF Biological Term Annotations	1.0	null
abnormal b cell morphology	MPO Gene-Phenotype Associations	1.0	null
lifralphact3	GeneRIF Biological Term Annotations	1.0	null
immortalized	GeneRIF Biological Term Annotations	1.0	null
genome	GeneRIF Biological Term Annotations	1.0	null
due	GeneRIF Biological Term Annotations	1.0	null
aortic	GeneRIF Biological Term Annotations	1.0	null
against	GeneRIF Biological Term Annotations	1.0	null
surgeryinduced	GeneRIF Biological Term Annotations	1.0	null
cases	GeneRIF Biological Term Annotations	1.0	null
CMK	CCLE Cell Line Gene CNV Profiles	1.0	1.91532
SIN3A_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
gscs	GeneRIF Biological Term Annotations	1.0	null
oncogene	GeneRIF Biological Term Annotations	1.0	null
BATF	ENCODE Transcription Factor Targets	1.0	null
suppresses	GeneRIF Biological Term Annotations	1.0	null
Cell Transformation, Neoplastic	CTD Gene-Disease Associations	1.0	1.08513
CREB1_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MTA3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
secreted	GeneRIF Biological Term Annotations	1.0	null
abnormal cytokine secretion	MPO Gene-Phenotype Associations	1.0	null
H3K27ac_embryonic fibroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
ZNF143_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir31	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_CD4+ CD25- CD45RO+ Memory Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
expressions	GeneRIF Biological Term Annotations	1.0	null
interplay	GeneRIF Biological Term Annotations	1.0	null
links	GeneRIF Biological Term Annotations	1.0	null
chronic	GeneRIF Biological Term Annotations	1.0	null
EP300_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
characterized	GeneRIF Biological Term Annotations	1.0	null
abnormal immune system morphology	MGI Mouse Phenotype Associations 2023	1.0	null
less	GeneRIF Biological Term Annotations	1.0	null
demonstrated	GeneRIF Biological Term Annotations	1.0	null
tlr2mediated	GeneRIF Biological Term Annotations	1.0	null
NFIC_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal interferon-gamma secretion	MPO Gene-Phenotype Associations	1.0	null
ultraviolet	GeneRIF Biological Term Annotations	1.0	null
decreased effector memory T-helper cell number	MGI Mouse Phenotype Associations 2023	1.0	null
acts	GeneRIF Biological Term Annotations	1.0	null
express	GeneRIF Biological Term Annotations	1.0	null
mdamb231	GeneRIF Biological Term Annotations	1.0	null
pancreatic	GeneRIF Biological Term Annotations	1.0	null
encephalitis	GeneRIF Biological Term Annotations	1.0	null
mir19a	GeneRIF Biological Term Annotations	1.0	null
bind	GeneRIF Biological Term Annotations	1.0	null
mir221	GeneRIF Biological Term Annotations	1.0	null
homolog	GeneRIF Biological Term Annotations	1.0	null
TAF1_PFSK-1_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pathogenesis	GeneRIF Biological Term Annotations	1.0	null
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.67268
inducer	GeneRIF Biological Term Annotations	1.0	null
abnormal peyer's patch follicle morphology	MPO Gene-Phenotype Associations	1.0	null
spinal	GeneRIF Biological Term Annotations	1.0	null
decreased regulatory t cell number	MPO Gene-Phenotype Associations	1.0	null
PL45	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.2784
thereby	GeneRIF Biological Term Annotations	1.0	null
abnormal humoral immune response	MGI Mouse Phenotype Associations 2023	1.0	null
barrier	GeneRIF Biological Term Annotations	1.0	null
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.05516
p38mapk	GeneRIF Biological Term Annotations	1.0	null
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.50801
abnormal alpha-beta t cell number	MPO Gene-Phenotype Associations	1.0	null
depends	GeneRIF Biological Term Annotations	1.0	null
p65	GeneRIF Biological Term Annotations	1.0	null
H3K27me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir34a	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_Adipose Derived Mesenchymal Stem Cell Cultured Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
part	GeneRIF Biological Term Annotations	1.0	null
abnormal igg1 level	MPO Gene-Phenotype Associations	1.0	null
suppressive	GeneRIF Biological Term Annotations	1.0	null
respiratory system phenotype	MPO Gene-Phenotype Associations	1.0	null
Inflammation	CTD Gene-Disease Associations	1.0	1.69017
myd88dependent	GeneRIF Biological Term Annotations	1.0	null
transforming	GeneRIF Biological Term Annotations	1.0	null
proatherogenic	GeneRIF Biological Term Annotations	1.0	null
diabetes	GeneRIF Biological Term Annotations	1.0	null
focuses	GeneRIF Biological Term Annotations	1.0	null
ELK1	ENCODE Transcription Factor Targets	1.0	null
observations	GeneRIF Biological Term Annotations	1.0	null
sarcomaassociated	GeneRIF Biological Term Annotations	1.0	null
CTCF_foreskin fibroblast_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mcf7	GeneRIF Biological Term Annotations	1.0	null
possible	GeneRIF Biological Term Annotations	1.0	null
behavior	GeneRIF Biological Term Annotations	1.0	null
H3K9ac_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
sox6	GeneRIF Biological Term Annotations	1.0	null
abnormal gut-associated lymphoid tissue morphology	MPO Gene-Phenotype Associations	1.0	null
highlevel	GeneRIF Biological Term Annotations	1.0	null
EBF1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
chemosensitivity	GeneRIF Biological Term Annotations	1.0	null
snps	GeneRIF Biological Term Annotations	1.0	null
thyroiditis	GeneRIF Biological Term Annotations	1.0	null
miR-targeted genes in epithelium - TarBase(Homo sapiens)	WikiPathways Pathways 2014	1.0	null
encoded	GeneRIF Biological Term Annotations	1.0	null
RT112	CCLE Cell Line Gene CNV Profiles	1.0	1.78398
mir222	GeneRIF Biological Term Annotations	1.0	null
hematopoietic	GeneRIF Biological Term Annotations	1.0	null
prolonged	GeneRIF Biological Term Annotations	1.0	null
erythematosus	GeneRIF Biological Term Annotations	1.0	null
specimens	GeneRIF Biological Term Annotations	1.0	null
kshv	GeneRIF Biological Term Annotations	1.0	null
decreased t cell number	MPO Gene-Phenotype Associations	1.0	null
myeloid	GeneRIF Biological Term Annotations	1.0	null
asthma	GeneRIF Biological Term Annotations	1.0	null
NCI-H2595	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.9004
analyzed	GeneRIF Biological Term Annotations	1.0	null
MYC_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
isoformspecific	GeneRIF Biological Term Annotations	1.0	null
abnormal interleukin secretion	MPO Gene-Phenotype Associations	1.0	null
respiratory system inflammation	MPO Gene-Phenotype Associations	1.0	null
different	GeneRIF Biological Term Annotations	1.0	null
bmpinduced	GeneRIF Biological Term Annotations	1.0	null
endotheliumdependent	GeneRIF Biological Term Annotations	1.0	null
form	GeneRIF Biological Term Annotations	1.0	null
Hepatomegaly	CTD Gene-Disease Associations	1.0	1.24024
histological	GeneRIF Biological Term Annotations	1.0	null
demonstrable	GeneRIF Biological Term Annotations	1.0	null
GATA3_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
POLR2AphosphoS5_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
enhances	GeneRIF Biological Term Annotations	1.0	null
abnormal spleen germinal center morphology	MPO Gene-Phenotype Associations	1.0	null
CTCF_foreskin fibroblast_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
gensini	GeneRIF Biological Term Annotations	1.0	null
value	GeneRIF Biological Term Annotations	1.0	null
tissues	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_astrocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
increased interleukin-10 secretion	MPO Gene-Phenotype Associations	1.0	null
diagnostic	GeneRIF Biological Term Annotations	1.0	null
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836825
H3K4me1_megakaryocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
POU2F2	ENCODE Transcription Factor Targets	1.0	null
mir1555p	GeneRIF Biological Term Annotations	1.0	null
dnacontaining	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
SMC3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SET2	CCLE Cell Line Gene CNV Profiles	1.0	2.04764
H3K4me3_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
positive	GeneRIF Biological Term Annotations	1.0	null
reverse	GeneRIF Biological Term Annotations	1.0	null
il8dependent	GeneRIF Biological Term Annotations	1.0	null
POLR2AphosphoS5_U-87 MG_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TK-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.930056
H3K36me3_K562_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
exhibited	GeneRIF Biological Term Annotations	1.0	null
ATF1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
causal	GeneRIF Biological Term Annotations	1.0	null
syndrome	GeneRIF Biological Term Annotations	1.0	null
endothelial	GeneRIF Biological Term Annotations	1.0	null
led	GeneRIF Biological Term Annotations	1.0	null
SOX10	MotifMap Predicted Transcription Factor Targets	1.0	null
autoimmune	GeneRIF Biological Term Annotations	1.0	null
studies	GeneRIF Biological Term Annotations	1.0	null
abnormal inflammatory response	MPO Gene-Phenotype Associations	1.0	null
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.02559
axis	GeneRIF Biological Term Annotations	1.0	null
ocular	GeneRIF Biological Term Annotations	1.0	null
feedback	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_GM12864_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
polycystic	GeneRIF Biological Term Annotations	1.0	null
decreased interleukin-6 secretion	MGI Mouse Phenotype Associations 2023	1.0	null
CTCF_HEK293_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
MAFF	ENCODE Transcription Factor Targets	1.0	null
stimulation	GeneRIF Biological Term Annotations	1.0	null
abnormal immune serum protein physiology	MPO Gene-Phenotype Associations	1.0	null
include	GeneRIF Biological Term Annotations	1.0	null
MEF2A_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cellular phenotype	MPO Gene-Phenotype Associations	1.0	null
H3K4me1_keratinocyte_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
recurrence	GeneRIF Biological Term Annotations	1.0	null
NCI-H2122	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.17541
stage	GeneRIF Biological Term Annotations	1.0	null
BCL11A	ENCODE Transcription Factor Targets	1.0	null
pylori	GeneRIF Biological Term Annotations	1.0	null
altered susceptibility to bacterial infection	MPO Gene-Phenotype Associations	1.0	null
K-562	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0279
decreased tumor necrosis factor secretion	MPO Gene-Phenotype Associations	1.0	null
endogenous	GeneRIF Biological Term Annotations	1.0	null
FOSL2_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NFIC_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SCC-9	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.962154
dermatitis	GeneRIF Biological Term Annotations	1.0	null
FOSL2_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
loss	GeneRIF Biological Term Annotations	1.0	null
represents	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_myotube_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
mir146a5p	GeneRIF Biological Term Annotations	1.0	null
BCLAF1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
approach	GeneRIF Biological Term Annotations	1.0	null
epithelial	GeneRIF Biological Term Annotations	1.0	null
CTCF_MCF-7_hg19_5	ENCODE Transcription Factor Binding Site Profiles	1.0	null
addressed	GeneRIF Biological Term Annotations	1.0	null
variations	GeneRIF Biological Term Annotations	1.0	null
distinguishing	GeneRIF Biological Term Annotations	1.0	null
15284443-Table6	GeneSigDB Published Gene Signatures	1.0	null
fine	GeneRIF Biological Term Annotations	1.0	null
oscillatory	GeneRIF Biological Term Annotations	1.0	null
whereas	GeneRIF Biological Term Annotations	1.0	null
19895320-Table1	GeneSigDB Published Gene Signatures	1.0	null
il13ralpha1	GeneRIF Biological Term Annotations	1.0	null
FOSL2_MCF-7_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
H2AFZ_fibroblast of lung_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
vhl	GeneRIF Biological Term Annotations	1.0	null
CEBPB_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
chinese	GeneRIF Biological Term Annotations	1.0	null
hypothermia	GeneRIF Biological Term Annotations	1.0	null
abnormal bronchiole morphology	MPO Gene-Phenotype Associations	1.0	null
COLO-783	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38978
RUNX3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
18381423-SuppTable1c	GeneSigDB Published Gene Signatures	1.0	null
establish	GeneRIF Biological Term Annotations	1.0	null
micrornas21	GeneRIF Biological Term Annotations	1.0	null
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00415
decreased spleen germinal center number	MPO Gene-Phenotype Associations	1.0	null
abnormal effector t cell morphology	MPO Gene-Phenotype Associations	1.0	null
implications	GeneRIF Biological Term Annotations	1.0	null
loop	GeneRIF Biological Term Annotations	1.0	null
immune system phenotype	MPO Gene-Phenotype Associations	1.0	null
aimed	GeneRIF Biological Term Annotations	1.0	null
clear	GeneRIF Biological Term Annotations	1.0	null
various	GeneRIF Biological Term Annotations	1.0	null
aggressive	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_GM12878_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
methylation	GeneRIF Biological Term Annotations	1.0	null
NFIC_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cellmediated	GeneRIF Biological Term Annotations	1.0	null
synovial	GeneRIF Biological Term Annotations	1.0	null
H2AFZ_B cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal intestine physiology	MPO Gene-Phenotype Associations	1.0	null
eGFP-FOS_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PATU8902	CCLE Cell Line Gene CNV Profiles	-1.0	-1.59976
Uterine Cervical Neoplasms	CTD Gene-Disease Associations	1.0	1.19607
OVISE	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.20047
mtor	GeneRIF Biological Term Annotations	1.0	null
pathological	GeneRIF Biological Term Annotations	1.0	null
colorectal	GeneRIF Biological Term Annotations	1.0	null
sensitivity	GeneRIF Biological Term Annotations	1.0	null
abnormal peyer's patch morphology	MPO Gene-Phenotype Associations	1.0	null
CCNT2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal chromosome stability	MPO Gene-Phenotype Associations	1.0	null
ATF3	ChEA Transcription Factor Targets	1.0	null
rheb	GeneRIF Biological Term Annotations	1.0	null
KP4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14675
CHD2	ENCODE Transcription Factor Targets	1.0	null
underexpressed	GeneRIF Biological Term Annotations	1.0	null
NCI-H2461	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.10013
virus	GeneRIF Biological Term Annotations	1.0	null
rates	GeneRIF Biological Term Annotations	1.0	null
addition	GeneRIF Biological Term Annotations	1.0	null
pathogens	GeneRIF Biological Term Annotations	1.0	null
progesterone	GeneRIF Biological Term Annotations	1.0	null
KYO1	CCLE Cell Line Gene CNV Profiles	1.0	1.37095
women	GeneRIF Biological Term Annotations	1.0	null
functions	GeneRIF Biological Term Annotations	1.0	null
bic	GeneRIF Biological Term Annotations	1.0	null
biological	GeneRIF Biological Term Annotations	1.0	null
caspase3	GeneRIF Biological Term Annotations	1.0	null
level	GeneRIF Biological Term Annotations	1.0	null
reported	GeneRIF Biological Term Annotations	1.0	null
ELF1_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
PBX3_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Weight Gain	CTD Gene-Disease Associations	1.0	1.09262
graves	GeneRIF Biological Term Annotations	1.0	null
NCI-H2106	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.62215
FOXM1_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inducing	GeneRIF Biological Term Annotations	1.0	null
transformation	GeneRIF Biological Term Annotations	1.0	null
diagnosis	GeneRIF Biological Term Annotations	1.0	null
abnormal professional antigen presenting cell physiology	MPO Gene-Phenotype Associations	1.0	null
eae	GeneRIF Biological Term Annotations	1.0	null
than	GeneRIF Biological Term Annotations	1.0	null
mirna146a	GeneRIF Biological Term Annotations	1.0	null
tandem	GeneRIF Biological Term Annotations	1.0	null
KAT2A	ENCODE Transcription Factor Targets	1.0	null
abnormal alpha-beta t cell morphology	MPO Gene-Phenotype Associations	1.0	null
directly	GeneRIF Biological Term Annotations	1.0	null
latent	GeneRIF Biological Term Annotations	1.0	null
tuner	GeneRIF Biological Term Annotations	1.0	null
COV413B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.38444
orbital	GeneRIF Biological Term Annotations	1.0	null
flavum	GeneRIF Biological Term Annotations	1.0	null
TCF3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Breast Neoplasms	CTD Gene-Disease Associations	1.0	1.15055
effects	GeneRIF Biological Term Annotations	1.0	null
leads	GeneRIF Biological Term Annotations	1.0	null
TBL1XR1	ENCODE Transcription Factor Targets	1.0	null
SNU-387	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-2.1245
ovary	GeneRIF Biological Term Annotations	1.0	null
Multiple Sclerosis	HuGE Navigator Gene-Phenotype Associations	1.0	null
H3K4me3_A549_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
JHH-7	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.952711
mirnas	GeneRIF Biological Term Annotations	1.0	null
papillary	GeneRIF Biological Term Annotations	1.0	null
tumors	GeneRIF Biological Term Annotations	1.0	null
repetitively	GeneRIF Biological Term Annotations	1.0	null
Anorexia	CTD Gene-Disease Associations	1.0	1.12048
finetuning	GeneRIF Biological Term Annotations	1.0	null
gravis	GeneRIF Biological Term Annotations	1.0	null
tumours	GeneRIF Biological Term Annotations	1.0	null
ELF1_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Neural Tube Defects	CTD Gene-Disease Associations	1.0	1.40232
mir9	GeneRIF Biological Term Annotations	1.0	null
proinflammatory	GeneRIF Biological Term Annotations	1.0	null
JUN_K562_hg19_6	ENCODE Transcription Factor Binding Site Profiles	1.0	null
current	GeneRIF Biological Term Annotations	1.0	null
atopic	GeneRIF Biological Term Annotations	1.0	null
decreased leukocyte cell number	MPO Gene-Phenotype Associations	1.0	null
stromal	GeneRIF Biological Term Annotations	1.0	null
abnormal t cell morphology	MPO Gene-Phenotype Associations	1.0	null
phase	GeneRIF Biological Term Annotations	1.0	null
hbec	GeneRIF Biological Term Annotations	1.0	null
samples	GeneRIF Biological Term Annotations	1.0	null
increased cd4-positive, alpha beta t cell number	MPO Gene-Phenotype Associations	1.0	null
STAT3_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
normal	GeneRIF Biological Term Annotations	1.0	null
mcl1	GeneRIF Biological Term Annotations	1.0	null
Mammary Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.0353
lower	GeneRIF Biological Term Annotations	1.0	null
effector	GeneRIF Biological Term Annotations	1.0	null
excessive	GeneRIF Biological Term Annotations	1.0	null
there	GeneRIF Biological Term Annotations	1.0	null
19895320-Table3	GeneSigDB Published Gene Signatures	1.0	null
dendritic	GeneRIF Biological Term Annotations	1.0	null
behcet	GeneRIF Biological Term Annotations	1.0	null
mir503	GeneRIF Biological Term Annotations	1.0	null
squamous	GeneRIF Biological Term Annotations	1.0	null
inositol	GeneRIF Biological Term Annotations	1.0	null
coronary	GeneRIF Biological Term Annotations	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.97606
TT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.49463
H3K27ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
able	GeneRIF Biological Term Annotations	1.0	null
FOS_endothelial cell of umbilical vein_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pi3kakt	GeneRIF Biological Term Annotations	1.0	null
upregulation	GeneRIF Biological Term Annotations	1.0	null
panin3	GeneRIF Biological Term Annotations	1.0	null
OCI-LY-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.971873
mismatch	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of upper leg skin_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
rafls	GeneRIF Biological Term Annotations	1.0	null
RAD21_SK-N-SH_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cluster	GeneRIF Biological Term Annotations	1.0	null
rage	GeneRIF Biological Term Annotations	1.0	null
dependent	GeneRIF Biological Term Annotations	1.0	null
glioblastoma	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_CD4 Naive Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
FOS	ENCODE Transcription Factor Targets	1.0	null
vein	GeneRIF Biological Term Annotations	1.0	null
STAT3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
harbored	GeneRIF Biological Term Annotations	1.0	null
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.20681
tcells	GeneRIF Biological Term Annotations	1.0	null
first	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_CD8 Memory Primary Cells	Roadmap Epigenomics Histone Modification Site Profiles	1.0	null
let75a	GeneRIF Biological Term Annotations	1.0	null
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00415
intestinal inflammation	MGI Mouse Phenotype Associations 2023	1.0	null
KMS-11	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.901417
CTCF_LNCaP clone FGC_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
prospective	GeneRIF Biological Term Annotations	1.0	null
prevent	GeneRIF Biological Term Annotations	1.0	null
jakstat	GeneRIF Biological Term Annotations	1.0	null
defect	GeneRIF Biological Term Annotations	1.0	null
18440302-SuppTable2	GeneSigDB Published Gene Signatures	1.0	null
inhibiting	GeneRIF Biological Term Annotations	1.0	null
BATF_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
modulating	GeneRIF Biological Term Annotations	1.0	null
20086245-Table2b	GeneSigDB Published Gene Signatures	1.0	null
bchronic	GeneRIF Biological Term Annotations	1.0	null
fasmediated	GeneRIF Biological Term Annotations	1.0	null
posttranscriptional	GeneRIF Biological Term Annotations	1.0	null
digestive/alimentary phenotype	MPO Gene-Phenotype Associations	1.0	null
adipogenic	GeneRIF Biological Term Annotations	1.0	null
LUDLU1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.5925
colitis	GeneRIF Biological Term Annotations	1.0	null
SPI1_GM12891_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
hypertrophy	GeneRIF Biological Term Annotations	1.0	null
YY1	ENCODE Transcription Factor Targets	1.0	null
algorithms	GeneRIF Biological Term Annotations	1.0	null
PBX3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abd	GeneRIF Biological Term Annotations	1.0	null
under	GeneRIF Biological Term Annotations	1.0	null
urinary	GeneRIF Biological Term Annotations	1.0	null
POU2F2_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
abnormal gut-associated lymphoid tissue morphology	MGI Mouse Phenotype Associations 2023	1.0	null
TCF12	ENCODE Transcription Factor Targets	1.0	null
types	GeneRIF Biological Term Annotations	1.0	null
abnormal b cell differentiation	MPO Gene-Phenotype Associations	1.0	null
POLR2AphosphoS2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
staging	GeneRIF Biological Term Annotations	1.0	null
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08046
valuable	GeneRIF Biological Term Annotations	1.0	null
ccaatenhancerbinding	GeneRIF Biological Term Annotations	1.0	null
gallbladder	GeneRIF Biological Term Annotations	1.0	null
activating	GeneRIF Biological Term Annotations	1.0	null
emt	GeneRIF Biological Term Annotations	1.0	null
creating	GeneRIF Biological Term Annotations	1.0	null
necrosis	GeneRIF Biological Term Annotations	1.0	null
abnormal immune system physiology	MPO Gene-Phenotype Associations	1.0	null
JUND	ENCODE Transcription Factor Targets	1.0	null
e2f2	GeneRIF Biological Term Annotations	1.0	null
improve	GeneRIF Biological Term Annotations	1.0	null
il13	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_fibroblast of mammary gland_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
RELA_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Edema	CTD Gene-Disease Associations	1.0	1.30512
increased alpha-beta t cell number	MPO Gene-Phenotype Associations	1.0	null
atherosclerosis	GeneRIF Biological Term Annotations	1.0	null
t2d	GeneRIF Biological Term Annotations	1.0	null
G292CLONEA141B1	CCLE Cell Line Gene CNV Profiles	-1.0	-1.62386
FOSL2	ENCODE Transcription Factor Targets	1.0	null
postentry	GeneRIF Biological Term Annotations	1.0	null
gbm	GeneRIF Biological Term Annotations	1.0	null
metabolic	GeneRIF Biological Term Annotations	1.0	null
overexpression	GeneRIF Biological Term Annotations	1.0	null
cd8	GeneRIF Biological Term Annotations	1.0	null
type	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SNB75	CCLE Cell Line Gene CNV Profiles	1.0	1.34519
modulation	GeneRIF Biological Term Annotations	1.0	null
autophagy	GeneRIF Biological Term Annotations	1.0	null
migration	GeneRIF Biological Term Annotations	1.0	null
FOSL1_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
TOLEDO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.885217
abnormal immune system cell morphology	MPO Gene-Phenotype Associations	1.0	null
BCL3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inflamed	GeneRIF Biological Term Annotations	1.0	null
htr8svneo	GeneRIF Biological Term Annotations	1.0	null
prognosis	GeneRIF Biological Term Annotations	1.0	null
basis	GeneRIF Biological Term Annotations	1.0	null
shown	GeneRIF Biological Term Annotations	1.0	null
MAX	ENCODE Transcription Factor Targets	1.0	null
MAFK	ENCODE Transcription Factor Targets	1.0	null
mir130a	GeneRIF Biological Term Annotations	1.0	null
used	GeneRIF Biological Term Annotations	1.0	null
scores	GeneRIF Biological Term Annotations	1.0	null
shifting	GeneRIF Biological Term Annotations	1.0	null
mir1243p	GeneRIF Biological Term Annotations	1.0	null
ZBTB33	ENCODE Transcription Factor Targets	1.0	null
increased leukocyte cell number	MPO Gene-Phenotype Associations	1.0	null
three	GeneRIF Biological Term Annotations	1.0	null
regulators	GeneRIF Biological Term Annotations	1.0	null
MAFF_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
site	GeneRIF Biological Term Annotations	1.0	null
indicated	GeneRIF Biological Term Annotations	1.0	null
pilot	GeneRIF Biological Term Annotations	1.0	null
mammalian phenotype	MPO Gene-Phenotype Associations	1.0	null
sclerosus	GeneRIF Biological Term Annotations	1.0	null
POU2F2_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
stretch	GeneRIF Biological Term Annotations	1.0	null
acute	GeneRIF Biological Term Annotations	1.0	null
review	GeneRIF Biological Term Annotations	1.0	null
starting	GeneRIF Biological Term Annotations	1.0	null
inhibition	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K4me2_HeLa-S3_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H2AFZ_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
JUND_SK-N-SH_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
NCIH2066	CCLE Cell Line Gene CNV Profiles	-1.0	-1.99541
abnormal hematopoietic system physiology	MPO Gene-Phenotype Associations	1.0	null
markers	GeneRIF Biological Term Annotations	1.0	null
Genetic Predisposition to Disease	HuGE Navigator Gene-Phenotype Associations	1.0	null
biologic	GeneRIF Biological Term Annotations	1.0	null
EP300_SK-N-SH_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
further	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
induce	GeneRIF Biological Term Annotations	1.0	null
s100a4	GeneRIF Biological Term Annotations	1.0	null
glomerulonephritis	GeneRIF Biological Term Annotations	1.0	null
CEBPB_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tissue	GeneRIF Biological Term Annotations	1.0	null
abnormal spleen white pulp morphology	MPO Gene-Phenotype Associations	1.0	null
prognostic	GeneRIF Biological Term Annotations	1.0	null
transient	GeneRIF Biological Term Annotations	1.0	null
20406893-Table1a	GeneSigDB Published Gene Signatures	1.0	null
bach1	GeneRIF Biological Term Annotations	1.0	null
field	GeneRIF Biological Term Annotations	1.0	null
H3K4me3_A549_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
cytokine	GeneRIF Biological Term Annotations	1.0	null
POLR2A_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
carcinomas	GeneRIF Biological Term Annotations	1.0	null
abnormal response to infection	MPO Gene-Phenotype Associations	1.0	null
involvement	GeneRIF Biological Term Annotations	1.0	null
BCL3	ENCODE Transcription Factor Targets	1.0	null
enhanced	GeneRIF Biological Term Annotations	1.0	null
JUN_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
FOS_MCF 10A_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
EP300	ENCODE Transcription Factor Targets	1.0	null
OVKATE	CCLE Cell Line Gene CNV Profiles	-1.0	-1.58628
src	GeneRIF Biological Term Annotations	1.0	null
decreased T-helper 17 cell number	MGI Mouse Phenotype Associations 2023	1.0	null
modulated	GeneRIF Biological Term Annotations	1.0	null
eradicate	GeneRIF Biological Term Annotations	1.0	null
ship	GeneRIF Biological Term Annotations	1.0	null
Hyperalgesia	CTD Gene-Disease Associations	1.0	1.03864
mir1425p	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_fibroblast of lung_hg19_2	ENCODE Histone Modification Site Profiles	1.0	null
pregnant	GeneRIF Biological Term Annotations	1.0	null
cytotoxic	GeneRIF Biological Term Annotations	1.0	null
abnormal immunoglobulin level	MPO Gene-Phenotype Associations	1.0	null
Atrophy	CTD Gene-Disease Associations	1.0	1.07983
intracellular	GeneRIF Biological Term Annotations	1.0	null
knockdown	GeneRIF Biological Term Annotations	1.0	null
KLE	CCLE Cell Line Gene CNV Profiles	1.0	1.34694
downregulated	GeneRIF Biological Term Annotations	1.0	null
ATF1	ENCODE Transcription Factor Targets	1.0	null
MYC	ENCODE Transcription Factor Targets	1.0	null
mycosis	GeneRIF Biological Term Annotations	1.0	null
MEF2A_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
microrna155	GeneRIF Biological Term Annotations	1.0	null
JUND_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nonsmall	GeneRIF Biological Term Annotations	1.0	null
brain	GeneRIF Biological Term Annotations	1.0	null
EBF1_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
fadd	GeneRIF Biological Term Annotations	1.0	null
PC-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.14755
mirna	GeneRIF Biological Term Annotations	1.0	null
SPI1	ChEA Transcription Factor Targets	1.0	null
E2F4_MCF 10A_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
suppressor	GeneRIF Biological Term Annotations	1.0	null
abnormal t cell number	MPO Gene-Phenotype Associations	1.0	null
support	GeneRIF Biological Term Annotations	1.0	null
after	GeneRIF Biological Term Annotations	1.0	null
esophageal	GeneRIF Biological Term Annotations	1.0	null
PML_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mir21	GeneRIF Biological Term Annotations	1.0	null
sle	GeneRIF Biological Term Annotations	1.0	null
candidates	GeneRIF Biological Term Annotations	1.0	null
abnormal immune cell physiology	MPO Gene-Phenotype Associations	1.0	null
wildtype	GeneRIF Biological Term Annotations	1.0	null
factorbeta	GeneRIF Biological Term Annotations	1.0	null
roles	GeneRIF Biological Term Annotations	1.0	null
strategy	GeneRIF Biological Term Annotations	1.0	null
caused	GeneRIF Biological Term Annotations	1.0	null
NCI-H1651	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.836825
enhance	GeneRIF Biological Term Annotations	1.0	null
decreased IgG1 level	MGI Mouse Phenotype Associations 2023	1.0	null
tap63	GeneRIF Biological Term Annotations	1.0	null
sclerosis	GeneRIF Biological Term Annotations	1.0	null