association	dataset	threshold value	standardized value
Hypertrophy	CTD Gene-Disease Associations	1.0	1.10562
qpcr	GeneRIF Biological Term Annotations	1.0	null
NCIH522	CCLE Cell Line Gene CNV Profiles	-1.0	-1.65685
H3K36me3_G1E-ER4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
lung	GeneRIF Biological Term Annotations	1.0	null
NCI-H1650	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927922
mir1516	GeneRIF Biological Term Annotations	1.0	null
NCI-H920	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14479
OCI-LY-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06664
shorter	GeneRIF Biological Term Annotations	1.0	null
myeloma	GeneRIF Biological Term Annotations	1.0	null
bind	GeneRIF Biological Term Annotations	1.0	null
ccnb1	GeneRIF Biological Term Annotations	1.0	null
implicates	GeneRIF Biological Term Annotations	1.0	null
proliferation	GeneRIF Biological Term Annotations	1.0	null
WIDR	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.86554
biallelic	GeneRIF Biological Term Annotations	1.0	null
UACC812	CCLE Cell Line Gene CNV Profiles	1.0	2.74114
sequester	GeneRIF Biological Term Annotations	1.0	null
pmns	GeneRIF Biological Term Annotations	1.0	null
likely	GeneRIF Biological Term Annotations	1.0	null
UACC-812	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.6628
HCC630	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.17718
OCI-AML3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06664
therapeutic	GeneRIF Biological Term Annotations	1.0	null
Necrosis	CTD Gene-Disease Associations	1.0	1.67761
SNU-484	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.70834
mir26ab	GeneRIF Biological Term Annotations	1.0	null
higher	GeneRIF Biological Term Annotations	1.0	null
STAT3	ChEA Transcription Factor Targets	1.0	null
cultures	GeneRIF Biological Term Annotations	1.0	null
group	GeneRIF Biological Term Annotations	1.0	null
bmi1	GeneRIF Biological Term Annotations	1.0	null
ALEXANDERCELLS	CCLE Cell Line Gene CNV Profiles	-1.0	-1.50714
KARPAS-1106P	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21675
Anemia	CTD Gene-Disease Associations	1.0	1.05015
LS1034	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.912799
effects	GeneRIF Biological Term Annotations	1.0	null
pathogenesis	GeneRIF Biological Term Annotations	1.0	null
SW948	CCLE Cell Line Gene CNV Profiles	1.0	2.12803
dleu1	GeneRIF Biological Term Annotations	1.0	null
repression	GeneRIF Biological Term Annotations	1.0	null
Lung Neoplasms	CTD Gene-Disease Associations	1.0	1.09716
H3K36me3_testis_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
RB1_KD_GSE50532_657_human_OSTEOBLASTS	GEO Signatures of Differentially Expressed Genes for Gene Perturbations	1.0	null
Prenatal Exposure Delayed Effects	CTD Gene-Disease Associations	1.0	1.38071
Neoplasms	CTD Gene-Disease Associations	1.0	1.51607
carm1	GeneRIF Biological Term Annotations	1.0	null
presence	GeneRIF Biological Term Annotations	1.0	null
NCI-H345	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.57112
POLR2AphosphoS2_K562_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
like	GeneRIF Biological Term Annotations	1.0	null
aggressive	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM12878_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CMK115	CCLE Cell Line Gene CNV Profiles	1.0	1.55507
Hyperkinesis	CTD Gene-Disease Associations	1.0	1.12048
marrow	GeneRIF Biological Term Annotations	1.0	null
repressed	GeneRIF Biological Term Annotations	1.0	null
implicated	GeneRIF Biological Term Annotations	1.0	null
governing	GeneRIF Biological Term Annotations	1.0	null
key	GeneRIF Biological Term Annotations	1.0	null
microrna15a	GeneRIF Biological Term Annotations	1.0	null
NCI-H2373	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.02119
drug	GeneRIF Biological Term Annotations	1.0	null
microprocessor	GeneRIF Biological Term Annotations	1.0	null
late	GeneRIF Biological Term Annotations	1.0	null
silencing	GeneRIF Biological Term Annotations	1.0	null
involving	GeneRIF Biological Term Annotations	1.0	null
epithelialmesenchymal	GeneRIF Biological Term Annotations	1.0	null
mir34a	GeneRIF Biological Term Annotations	1.0	null
POLR2A	ENCODE Transcription Factor Targets	1.0	null
COLO 800	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0748
transcribed	GeneRIF Biological Term Annotations	1.0	null
reconstituting	GeneRIF Biological Term Annotations	1.0	null
regulatory	GeneRIF Biological Term Annotations	1.0	null
evasion	GeneRIF Biological Term Annotations	1.0	null
AR_01_278	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	1.0	2.48694
transcription	GeneRIF Biological Term Annotations	1.0	null
LXFL529	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21675
NCI-H929	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.943519
H3K36me3_erythroblast_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
tamoxifeninduced	GeneRIF Biological Term Annotations	1.0	null
modulation	GeneRIF Biological Term Annotations	1.0	null
mir29b	GeneRIF Biological Term Annotations	1.0	null
STAT3-18555785-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
rna	GeneRIF Biological Term Annotations	1.0	null
leukemia	GeneRIF Biological Term Annotations	1.0	null
tissues	GeneRIF Biological Term Annotations	1.0	null
upregulation	GeneRIF Biological Term Annotations	1.0	null
deletion	GeneRIF Biological Term Annotations	1.0	null
hsamir15ahsamir161	GeneRIF Biological Term Annotations	1.0	null
represent	GeneRIF Biological Term Annotations	1.0	null
primicrorna	GeneRIF Biological Term Annotations	1.0	null
mdr	GeneRIF Biological Term Annotations	1.0	null
hmga2targeting	GeneRIF Biological Term Annotations	1.0	null
Thrombocytopenia	CTD Gene-Disease Associations	1.0	1.0869
Liver Neoplasms	CTD Gene-Disease Associations	1.0	1.26917
contribute	GeneRIF Biological Term Annotations	1.0	null
noncoding	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_liver_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
OCIAML3	CCLE Cell Line Gene CNV Profiles	-1.0	-1.32813
COLO201	CCLE Cell Line Gene CNV Profiles	1.0	1.40098
HCC4011	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68801
a2a	GeneRIF Biological Term Annotations	1.0	null
suppress	GeneRIF Biological Term Annotations	1.0	null
RMG-I	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05942
copy	GeneRIF Biological Term Annotations	1.0	null
primary	GeneRIF Biological Term Annotations	1.0	null
one	GeneRIF Biological Term Annotations	1.0	null
her2delta16	GeneRIF Biological Term Annotations	1.0	null
mapkinases	GeneRIF Biological Term Annotations	1.0	null
subset	GeneRIF Biological Term Annotations	1.0	null
20086245-Table2a	GeneSigDB Published Gene Signatures	1.0	null
induces	GeneRIF Biological Term Annotations	1.0	null
mir15	GeneRIF Biological Term Annotations	1.0	null
SNU-719	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903979
Non-alcoholic Fatty Liver Disease	CTD Gene-Disease Associations	1.0	1.18587
underlying	GeneRIF Biological Term Annotations	1.0	null
TRIM28_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
inducing	GeneRIF Biological Term Annotations	1.0	null
VMRC-LCD	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.25085
Myocardial Reperfusion Injury	CTD Gene-Disease Associations	1.0	2.88009
BICR18	CCLE Cell Line Gene CNV Profiles	1.0	1.46703
H3K36me3_BJ_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
axis	GeneRIF Biological Term Annotations	1.0	null
Nervous System Diseases	CTD Gene-Disease Associations	1.0	1.01474
bcl2	GeneRIF Biological Term Annotations	1.0	null
bone	GeneRIF Biological Term Annotations	1.0	null
decrease	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_GM12878_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
Kidney Diseases	CTD Gene-Disease Associations	1.0	1.59708
HCC2218	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.898471
transporter	GeneRIF Biological Term Annotations	1.0	null
CHAGO-K-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06664
NCIH1975	CCLE Cell Line Gene CNV Profiles	-1.0	-1.39658
effect	GeneRIF Biological Term Annotations	1.0	null
evaluate	GeneRIF Biological Term Annotations	1.0	null
KARPAS-422	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.0354
HEP3B217	CCLE Cell Line Gene CNV Profiles	-1.0	-1.94725
HCC2157	CCLE Cell Line Gene CNV Profiles	-1.0	-1.83989
inhibited	GeneRIF Biological Term Annotations	1.0	null
Atrophy	CTD Gene-Disease Associations	1.0	1.10699
bcell	GeneRIF Biological Term Annotations	1.0	null
hdac3	GeneRIF Biological Term Annotations	1.0	null
Hypertension	CTD Gene-Disease Associations	1.0	1.27782
derepress	GeneRIF Biological Term Annotations	1.0	null
transcriptional	GeneRIF Biological Term Annotations	1.0	null
CTCF	ENCODE Transcription Factor Targets	1.0	null
VMRCRCW	CCLE Cell Line Gene CNV Profiles	-1.0	-1.54539
HCC1263	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.73993
ECC12	CCLE Cell Line Gene CNV Profiles	-1.0	-1.37003
POLR2A_HeLa-S3_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
feedback	GeneRIF Biological Term Annotations	1.0	null
alleviates	GeneRIF Biological Term Annotations	1.0	null
reduction	GeneRIF Biological Term Annotations	1.0	null
endothelin1	GeneRIF Biological Term Annotations	1.0	null
vitamin	GeneRIF Biological Term Annotations	1.0	null
possess	GeneRIF Biological Term Annotations	1.0	null
shown	GeneRIF Biological Term Annotations	1.0	null
COLO 320DM	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.845889
cyclin	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_megakaryocyte_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
changes	GeneRIF Biological Term Annotations	1.0	null
U937	CCLE Cell Line Gene CNV Profiles	1.0	1.39792
explain	GeneRIF Biological Term Annotations	1.0	null
20448109-Table2	GeneSigDB Published Gene Signatures	1.0	null
part	GeneRIF Biological Term Annotations	1.0	null
ChIP_ASH2L_23239880	ESCAPE Omics Signatures of Genes and Proteins for Stem Cells	1.0	null
modulates	GeneRIF Biological Term Annotations	1.0	null
deacetylases	GeneRIF Biological Term Annotations	1.0	null
COLO 853	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.904736
highthroughput	GeneRIF Biological Term Annotations	1.0	null
adenosine	GeneRIF Biological Term Annotations	1.0	null
leads	GeneRIF Biological Term Annotations	1.0	null
binucleation	GeneRIF Biological Term Annotations	1.0	null
JL-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00306
environment	GeneRIF Biological Term Annotations	1.0	null
support	GeneRIF Biological Term Annotations	1.0	null
suppressor	GeneRIF Biological Term Annotations	1.0	null
metastatic	GeneRIF Biological Term Annotations	1.0	null
mir	GeneRIF Biological Term Annotations	1.0	null
ASH2L-23239880-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
NCI-H889	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.64866
H3K36me3_G1E_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
cellcycle	GeneRIF Biological Term Annotations	1.0	null
induce	GeneRIF Biological Term Annotations	1.0	null
WSU-DLCL2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06664
Glioma	CTD Gene-Disease Associations	1.0	1.23169
endothelial	GeneRIF Biological Term Annotations	1.0	null
metalloproteinase9	GeneRIF Biological Term Annotations	1.0	null
sensitivity	GeneRIF Biological Term Annotations	1.0	null
CL-34	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.38287
Proteinuria	CTD Gene-Disease Associations	1.0	1.04239
H3K36me3_G1E_mm9_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
nnktl	GeneRIF Biological Term Annotations	1.0	null
COLO 201	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0319
while	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_myocyte_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
there	GeneRIF Biological Term Annotations	1.0	null
rbdependent	GeneRIF Biological Term Annotations	1.0	null
hbx	GeneRIF Biological Term Annotations	1.0	null
possibly	GeneRIF Biological Term Annotations	1.0	null
only	GeneRIF Biological Term Annotations	1.0	null
lowrisk	GeneRIF Biological Term Annotations	1.0	null
GATA2	JASPAR Predicted Transcription Factor Targets	1.0	null
lmp1	GeneRIF Biological Term Annotations	1.0	null
FADU	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.0319
significant	GeneRIF Biological Term Annotations	1.0	null
encoded	GeneRIF Biological Term Annotations	1.0	null
CALU6	CCLE Cell Line Gene CNV Profiles	1.0	2.76375
turn	GeneRIF Biological Term Annotations	1.0	null
when	GeneRIF Biological Term Annotations	1.0	null
suppressive	GeneRIF Biological Term Annotations	1.0	null
RC-K8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29392
samples	GeneRIF Biological Term Annotations	1.0	null
targeting	GeneRIF Biological Term Annotations	1.0	null
NCI-H1573	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.17929
CAL78	CCLE Cell Line Gene CNV Profiles	-1.0	-3.21049
Leukemia, Promyelocytic, Acute	CTD Gene-Disease Associations	1.0	2.88009
line	GeneRIF Biological Term Annotations	1.0	null
multiple	GeneRIF Biological Term Annotations	1.0	null
often	GeneRIF Biological Term Annotations	1.0	null
Heart Diseases	CTD Gene-Disease Associations	1.0	1.15391
observations	GeneRIF Biological Term Annotations	1.0	null
let7a	GeneRIF Biological Term Annotations	1.0	null
NCI-H1435	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.327
LN319	CCLE Cell Line Gene CNV Profiles	-1.0	-2.34877
mirnas	GeneRIF Biological Term Annotations	1.0	null
ETS1	ENCODE Transcription Factor Targets	1.0	null
deletions	GeneRIF Biological Term Annotations	1.0	null
NCIH1734	CCLE Cell Line Gene CNV Profiles	-1.0	-1.63785
micrornas	GeneRIF Biological Term Annotations	1.0	null
arrest	GeneRIF Biological Term Annotations	1.0	null
SNU-449	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.36452
SK-MEL-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06664
MHH-ES-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.14877
H4K20me1_B cell_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
neuroblastoma	GeneRIF Biological Term Annotations	1.0	null
NCI-H1792	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-3.10917
FOXL1	JASPAR Predicted Transcription Factor Targets	1.0	null
mirna16	GeneRIF Biological Term Annotations	1.0	null
EFM-19	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.42496
features	GeneRIF Biological Term Annotations	1.0	null
complementary	GeneRIF Biological Term Annotations	1.0	null
progesterone	GeneRIF Biological Term Annotations	1.0	null
KMBC2	CCLE Cell Line Gene CNV Profiles	-1.0	-2.20314
Glucose Intolerance	CTD Gene-Disease Associations	1.0	1.16866
hematopoiesis	GeneRIF Biological Term Annotations	1.0	null
NCI-H2009	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.903979
demonistrated	GeneRIF Biological Term Annotations	1.0	null
differentially	GeneRIF Biological Term Annotations	1.0	null
RCM-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.86554
PLC/PRF/5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.21935
REST_01_338	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.61216
OCUM1	CCLE Cell Line Gene CNV Profiles	1.0	1.33632
UCSD-242L	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.912799
H3K36me3_G1E_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
potentially	GeneRIF Biological Term Annotations	1.0	null
overexpression	GeneRIF Biological Term Annotations	1.0	null
mesenchymal	GeneRIF Biological Term Annotations	1.0	null
malignant	GeneRIF Biological Term Annotations	1.0	null
suppression	GeneRIF Biological Term Annotations	1.0	null
lymphocytic	GeneRIF Biological Term Annotations	1.0	null
survival	GeneRIF Biological Term Annotations	1.0	null
Breast Neoplasms	CTD Gene-Disease Associations	1.0	1.3228
H3K36me3_endothelial cell of umbilical vein_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
leukemic	GeneRIF Biological Term Annotations	1.0	null
downstream	GeneRIF Biological Term Annotations	1.0	null
muscle	GeneRIF Biological Term Annotations	1.0	null
ML-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37992
respectively	GeneRIF Biological Term Annotations	1.0	null
mir222	GeneRIF Biological Term Annotations	1.0	null
cd4	GeneRIF Biological Term Annotations	1.0	null
adenocarcinoma	GeneRIF Biological Term Annotations	1.0	null
LS513	CCLE Cell Line Gene CNV Profiles	1.0	1.51402
H3K36me3_spleen_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
long	GeneRIF Biological Term Annotations	1.0	null
arrestinducing	GeneRIF Biological Term Annotations	1.0	null
propose	GeneRIF Biological Term Annotations	1.0	null
HT-29	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864796
NCIH508	CCLE Cell Line Gene CNV Profiles	1.0	2.26925
pediatric	GeneRIF Biological Term Annotations	1.0	null
tp53	GeneRIF Biological Term Annotations	1.0	null
transformation	GeneRIF Biological Term Annotations	1.0	null
COLO 794	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.18379
HMY-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.25497
chromosome	GeneRIF Biological Term Annotations	1.0	null
bystander	GeneRIF Biological Term Annotations	1.0	null
site	GeneRIF Biological Term Annotations	1.0	null
CALU-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68738
klf4	GeneRIF Biological Term Annotations	1.0	null
TCC-PAN2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.86554
biogenesis	GeneRIF Biological Term Annotations	1.0	null
mycinduced	GeneRIF Biological Term Annotations	1.0	null
least	GeneRIF Biological Term Annotations	1.0	null
sickle	GeneRIF Biological Term Annotations	1.0	null
EFM-192A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.864796
Adenocarcinoma	CTD Gene-Disease Associations	1.0	1.36533
akt3	GeneRIF Biological Term Annotations	1.0	null
MEG01	CCLE Cell Line Gene CNV Profiles	-1.0	-2.59447
bortezomib	GeneRIF Biological Term Annotations	1.0	null
smooth	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM12878_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
more	GeneRIF Biological Term Annotations	1.0	null
Neoplasms, Experimental	CTD Gene-Disease Associations	1.0	1.38918
dysregulated	GeneRIF Biological Term Annotations	1.0	null
highlighted	GeneRIF Biological Term Annotations	1.0	null
region	GeneRIF Biological Term Annotations	1.0	null
treatment	GeneRIF Biological Term Annotations	1.0	null
downregulation	GeneRIF Biological Term Annotations	1.0	null
NCI-H1048	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00408
PANC 03.27	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.912799
akt	GeneRIF Biological Term Annotations	1.0	null
pcmt1	GeneRIF Biological Term Annotations	1.0	null
negatively	GeneRIF Biological Term Annotations	1.0	null
NCI-H2073	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43417
targeted	GeneRIF Biological Term Annotations	1.0	null
MX-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.50682
Pain	CTD Gene-Disease Associations	1.0	1.12151
mds	GeneRIF Biological Term Annotations	1.0	null
meg01	GeneRIF Biological Term Annotations	1.0	null
KO52	CCLE Cell Line Gene CNV Profiles	1.0	1.85096
OCI-LY-10	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05764
SK-MEL-28	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00397
Neutropenia	CTD Gene-Disease Associations	1.0	1.14438
prognostic	GeneRIF Biological Term Annotations	1.0	null
groups	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_MEL cell line_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CAL-148	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03489
ccnd1	GeneRIF Biological Term Annotations	1.0	null
cycle	GeneRIF Biological Term Annotations	1.0	null
release	GeneRIF Biological Term Annotations	1.0	null
sponge	GeneRIF Biological Term Annotations	1.0	null
NCI-H1734	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.43417
regulated	GeneRIF Biological Term Annotations	1.0	null
cmycdriven	GeneRIF Biological Term Annotations	1.0	null
mir1792	GeneRIF Biological Term Annotations	1.0	null
checkpoint	GeneRIF Biological Term Annotations	1.0	null
impairs	GeneRIF Biological Term Annotations	1.0	null
autoregulatory	GeneRIF Biological Term Annotations	1.0	null
thet	GeneRIF Biological Term Annotations	1.0	null
PL-21	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.75524
mouse	GeneRIF Biological Term Annotations	1.0	null
map3kip3	GeneRIF Biological Term Annotations	1.0	null
prognosis	GeneRIF Biological Term Annotations	1.0	null
estrogen	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_mammary epithelial cell_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
independent	GeneRIF Biological Term Annotations	1.0	null
neonatal	GeneRIF Biological Term Annotations	1.0	null
increase	GeneRIF Biological Term Annotations	1.0	null
16934749-Table3	GeneSigDB Published Gene Signatures	1.0	null
therapies	GeneRIF Biological Term Annotations	1.0	null
MT-3	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29392
histone	GeneRIF Biological Term Annotations	1.0	null
U266B1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.975552
DV-90	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06664
tretinoin_homo sapiens_gpl6244_gds4180	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
ductal	GeneRIF Biological Term Annotations	1.0	null
P31FUJ	CCLE Cell Line Gene CNV Profiles	1.0	1.71071
CMK	CCLE Cell Line Gene CNV Profiles	1.0	1.36241
OUMS23	CCLE Cell Line Gene CNV Profiles	1.0	1.67762
highrisk	GeneRIF Biological Term Annotations	1.0	null
POLR2A_HepG2_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
embedded	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_keratinocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
kcot	GeneRIF Biological Term Annotations	1.0	null
WSU-FSCCL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.29523
however	GeneRIF Biological Term Annotations	1.0	null
SW 1417	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.03107
OVSAHO	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51634
chronic	GeneRIF Biological Term Annotations	1.0	null
cancers	GeneRIF Biological Term Annotations	1.0	null
Edema	CTD Gene-Disease Associations	1.0	1.21402
HSC2	CCLE Cell Line Gene CNV Profiles	1.0	1.42324
wt1	GeneRIF Biological Term Annotations	1.0	null
nonsmall	GeneRIF Biological Term Annotations	1.0	null
percentage	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_erythroblast_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
transition	GeneRIF Biological Term Annotations	1.0	null
commonly	GeneRIF Biological Term Annotations	1.0	null
tumors	GeneRIF Biological Term Annotations	1.0	null
mir15107	GeneRIF Biological Term Annotations	1.0	null
mir15a	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_CH12.LX_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
Infertility, Male	CTD Gene-Disease Associations	1.0	1.25059
locus	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_erythroblast_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
apoptosis	GeneRIF Biological Term Annotations	1.0	null
arsenic trioxide	CTD Gene-Chemical Interactions	1.0	null
H3K36me3_megakaryocyte_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
induction	GeneRIF Biological Term Annotations	1.0	null
coregulation	GeneRIF Biological Term Annotations	1.0	null
Disease Models, Animal	CTD Gene-Disease Associations	1.0	1.37648
demonstrate	GeneRIF Biological Term Annotations	1.0	null
SW1463	CCLE Cell Line Gene CNV Profiles	1.0	1.70357
Drug-Induced Liver Injury	CTD Gene-Disease Associations	1.0	1.83592
model	GeneRIF Biological Term Annotations	1.0	null
Hyperplasia	CTD Gene-Disease Associations	1.0	1.10803
20028859-TableS2	GeneSigDB Published Gene Signatures	1.0	null
WSU-NHL	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.37992
GRANTA-519	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.917304
COLO205	CCLE Cell Line Gene CNV Profiles	1.0	2.13178
outcome	GeneRIF Biological Term Annotations	1.0	null
clonal	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_G1E-ER4_mm9_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
SU-DHL-4	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.1489
COLO800	CCLE Cell Line Gene CNV Profiles	1.0	1.57627
microrna	GeneRIF Biological Term Annotations	1.0	null
ASH2L	ChEA Transcription Factor Targets	1.0	null
Fatty Liver	CTD Gene-Disease Associations	1.0	1.51004
acs	GeneRIF Biological Term Annotations	1.0	null
present	GeneRIF Biological Term Annotations	1.0	null
act	GeneRIF Biological Term Annotations	1.0	null
mir15a161deletion	GeneRIF Biological Term Annotations	1.0	null
COLO320	CCLE Cell Line Gene CNV Profiles	1.0	1.49872
mirna15	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_kidney_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
COLO 857	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.952749
mir223	GeneRIF Biological Term Annotations	1.0	null
SU-DHL-8	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.05764
sclerosis	GeneRIF Biological Term Annotations	1.0	null
dleu2	GeneRIF Biological Term Annotations	1.0	null
COLO 206F	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.33898
ovarian	GeneRIF Biological Term Annotations	1.0	null
pancreatic	GeneRIF Biological Term Annotations	1.0	null
NCIH2291	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56362
period	GeneRIF Biological Term Annotations	1.0	null
19807731-Figure1	GeneSigDB Published Gene Signatures	1.0	null
grn	GeneRIF Biological Term Annotations	1.0	null
TK	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.96269
NCIH889	CCLE Cell Line Gene CNV Profiles	-1.0	-1.76259
lymphoblastic	GeneRIF Biological Term Annotations	1.0	null
Learning Disorders	CTD Gene-Disease Associations	1.0	1.11186
downregulated	GeneRIF Biological Term Annotations	1.0	null
Liver Diseases	CTD Gene-Disease Associations	1.0	1.03715
DBTRG05MG	CCLE Cell Line Gene CNV Profiles	1.0	1.60762
oncogenes	GeneRIF Biological Term Annotations	1.0	null
vemurafenib_homo sapiens_gpl6244_gse24862	GEO Signatures of Differentially Expressed Genes for Small Molecules	1.0	null
nfkappabactivator	GeneRIF Biological Term Annotations	1.0	null
targets	GeneRIF Biological Term Annotations	1.0	null
stromal	GeneRIF Biological Term Annotations	1.0	null
SW 948	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.08544
COLO 205	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.73993
vitro	GeneRIF Biological Term Annotations	1.0	null
mir181a	GeneRIF Biological Term Annotations	1.0	null
accelerates	GeneRIF Biological Term Annotations	1.0	null
CALU-6	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.60468
Weight Loss	CTD Gene-Disease Associations	1.0	1.52693
SNUC1	CCLE Cell Line Gene CNV Profiles	1.0	1.73856
osteosarcoma	GeneRIF Biological Term Annotations	1.0	null
decreased	GeneRIF Biological Term Annotations	1.0	null
induced	GeneRIF Biological Term Annotations	1.0	null
provide	GeneRIF Biological Term Annotations	1.0	null
healthy	GeneRIF Biological Term Annotations	1.0	null
positively	GeneRIF Biological Term Annotations	1.0	null
proangiogenic	GeneRIF Biological Term Annotations	1.0	null
especially	GeneRIF Biological Term Annotations	1.0	null
reveal	GeneRIF Biological Term Annotations	1.0	null
nucleolin	GeneRIF Biological Term Annotations	1.0	null
FOXC1	JASPAR Predicted Transcription Factor Targets	1.0	null
mirna214	GeneRIF Biological Term Annotations	1.0	null
synergistically	GeneRIF Biological Term Annotations	1.0	null
Neurotoxicity Syndromes	CTD Gene-Disease Associations	1.0	1.12185
protect	GeneRIF Biological Term Annotations	1.0	null
SNU-C1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.73993
clusters	GeneRIF Biological Term Annotations	1.0	null
another	GeneRIF Biological Term Annotations	1.0	null
hbf	GeneRIF Biological Term Annotations	1.0	null
leukemogenesis	GeneRIF Biological Term Annotations	1.0	null
SNU1197	CCLE Cell Line Gene CNV Profiles	1.0	1.76491
COLO668	CCLE Cell Line Gene CNV Profiles	1.0	2.00976
Spinal Cord Diseases	CTD Gene-Disease Associations	1.0	1.25713
POLR2A_K562_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CTCF_skin fibroblast_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
suppressions	GeneRIF Biological Term Annotations	1.0	null
H3K79me2_CH12.LX_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
19895320-Table2	GeneSigDB Published Gene Signatures	1.0	null
EFO21	CCLE Cell Line Gene CNV Profiles	-1.0	-1.57397
poor	GeneRIF Biological Term Annotations	1.0	null
modulated	GeneRIF Biological Term Annotations	1.0	null
transcriptionally	GeneRIF Biological Term Annotations	1.0	null
transgene	GeneRIF Biological Term Annotations	1.0	null
prowess	GeneRIF Biological Term Annotations	1.0	null
H3K27ac_fibroblast of dermis_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
H3K36me3_CH12.LX_mm9_4	ENCODE Transcription Factor Binding Site Profiles	1.0	null
epithelial	GeneRIF Biological Term Annotations	1.0	null
NCIH1355	CCLE Cell Line Gene CNV Profiles	-1.0	-1.47587
loss	GeneRIF Biological Term Annotations	1.0	null
odontogenic	GeneRIF Biological Term Annotations	1.0	null
controlling	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_heart_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
homozygously	GeneRIF Biological Term Annotations	1.0	null
identify	GeneRIF Biological Term Annotations	1.0	null
resulted	GeneRIF Biological Term Annotations	1.0	null
migration	GeneRIF Biological Term Annotations	1.0	null
H3K79me3_C2C12_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
g2m	GeneRIF Biological Term Annotations	1.0	null
PLB985	CCLE Cell Line Gene CNV Profiles	1.0	1.3718
mediate	GeneRIF Biological Term Annotations	1.0	null
partly	GeneRIF Biological Term Annotations	1.0	null
progressionfree	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_brain_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
relapsing	GeneRIF Biological Term Annotations	1.0	null
SNU449	CCLE Cell Line Gene CNV Profiles	-1.0	-1.566
tumorigenesis	GeneRIF Biological Term Annotations	1.0	null
functions	GeneRIF Biological Term Annotations	1.0	null
EVSAT	CCLE Cell Line Gene CNV Profiles	-1.0	-1.51608
Drug-Related Side Effects and Adverse Reactions	CTD Gene-Disease Associations	1.0	1.18359
NCI-H1355	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.18241
clinicopathological	GeneRIF Biological Term Annotations	1.0	null
Seizures	CTD Gene-Disease Associations	1.0	1.33434
colorectal	GeneRIF Biological Term Annotations	1.0	null
NCI-H1623	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.64866
significance	GeneRIF Biological Term Annotations	1.0	null
Prenatal Injuries	CTD Gene-Disease Associations	1.0	1.26576
loop	GeneRIF Biological Term Annotations	1.0	null
myb	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM06990_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
involvement	GeneRIF Biological Term Annotations	1.0	null
nuclear	GeneRIF Biological Term Annotations	1.0	null
than	GeneRIF Biological Term Annotations	1.0	null
control	GeneRIF Biological Term Annotations	1.0	null
clinical	GeneRIF Biological Term Annotations	1.0	null
acts	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
IM-95	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.00408
androgen	GeneRIF Biological Term Annotations	1.0	null
inhibiting	GeneRIF Biological Term Annotations	1.0	null
due	GeneRIF Biological Term Annotations	1.0	null
Inflammation	CTD Gene-Disease Associations	1.0	1.52616
SNU-5	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.84222
Fetal Growth Retardation	CTD Gene-Disease Associations	1.0	1.15324
H3K27ac_osteoblast_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
19924232-TableS1	GeneSigDB Published Gene Signatures	1.0	null
H3K36me3_cardiac mesoderm_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
p53induced	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_small intestine_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
pheochromocytomas	GeneRIF Biological Term Annotations	1.0	null
kinase	GeneRIF Biological Term Annotations	1.0	null
mirna	GeneRIF Biological Term Annotations	1.0	null
Anorexia	CTD Gene-Disease Associations	1.0	1.15223
TRIM28	ENCODE Transcription Factor Targets	1.0	null
pathomechanism	GeneRIF Biological Term Annotations	1.0	null
mir16	GeneRIF Biological Term Annotations	1.0	null
vegf	GeneRIF Biological Term Annotations	1.0	null
acute	GeneRIF Biological Term Annotations	1.0	null
KP-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.34848
phase	GeneRIF Biological Term Annotations	1.0	null
RI-1	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.09799
H3K79me2_MEL cell line_mm9_1	ENCODE Histone Modification Site Profiles	1.0	null
future	GeneRIF Biological Term Annotations	1.0	null
oncogene	GeneRIF Biological Term Annotations	1.0	null
H3K4me1_T-cell acute lymphoblastic leukemia_hg19_1	ENCODE Histone Modification Site Profiles	1.0	null
ETS1_CH12.LX_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mechanisms	GeneRIF Biological Term Annotations	1.0	null
known	GeneRIF Biological Term Annotations	1.0	null
invasion	GeneRIF Biological Term Annotations	1.0	null
aml	GeneRIF Biological Term Annotations	1.0	null
NCI-H1930	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961874
Cognition Disorders	CTD Gene-Disease Associations	1.0	1.35934
determine	GeneRIF Biological Term Annotations	1.0	null
20054351-Table2	GeneSigDB Published Gene Signatures	1.0	null
betathalassemia	GeneRIF Biological Term Annotations	1.0	null
used	GeneRIF Biological Term Annotations	1.0	null
aimed	GeneRIF Biological Term Annotations	1.0	null
suppressed	GeneRIF Biological Term Annotations	1.0	null
other	GeneRIF Biological Term Annotations	1.0	null
Depressive Disorder	CTD Gene-Disease Associations	1.0	1.67998
mediated	GeneRIF Biological Term Annotations	1.0	null
manipulated	GeneRIF Biological Term Annotations	1.0	null
IM-95M	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.06664
angiogenesis	GeneRIF Biological Term Annotations	1.0	null
adult	GeneRIF Biological Term Annotations	1.0	null
JHOS4	CCLE Cell Line Gene CNV Profiles	1.0	1.69905
stabilizes	GeneRIF Biological Term Annotations	1.0	null
doublenegative	GeneRIF Biological Term Annotations	1.0	null
prostate	GeneRIF Biological Term Annotations	1.0	null
cluster	GeneRIF Biological Term Annotations	1.0	null
myeloidspecific	GeneRIF Biological Term Annotations	1.0	null
Uterine Cervical Neoplasms	CTD Gene-Disease Associations	1.0	1.22145
H3K36me3_astrocyte_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
upregulate	GeneRIF Biological Term Annotations	1.0	null
Memory Disorders	CTD Gene-Disease Associations	1.0	1.33938
suppressing	GeneRIF Biological Term Annotations	1.0	null
vascular	GeneRIF Biological Term Annotations	1.0	null
pituitary	GeneRIF Biological Term Annotations	1.0	null
NCIH1623	CCLE Cell Line Gene CNV Profiles	-1.0	-1.56414
serinethreonineproteinkinase	GeneRIF Biological Term Annotations	1.0	null
mir15amir161	GeneRIF Biological Term Annotations	1.0	null
withdrawal	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_thymus_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
families	GeneRIF Biological Term Annotations	1.0	null
number	GeneRIF Biological Term Annotations	1.0	null
HCC1319	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.60996
common	GeneRIF Biological Term Annotations	1.0	null
modulating	GeneRIF Biological Term Annotations	1.0	null
hmga1	GeneRIF Biological Term Annotations	1.0	null
cmyb	GeneRIF Biological Term Annotations	1.0	null
family	GeneRIF Biological Term Annotations	1.0	null
CL-40	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.21675
NCI-H2135	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.879593
advanced	GeneRIF Biological Term Annotations	1.0	null
keratocystic	GeneRIF Biological Term Annotations	1.0	null
ribosomalproteins6	GeneRIF Biological Term Annotations	1.0	null
breast	GeneRIF Biological Term Annotations	1.0	null
DU4475	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927455
states	GeneRIF Biological Term Annotations	1.0	null
SOX5	JASPAR Predicted Transcription Factor Targets	1.0	null
suppressors	GeneRIF Biological Term Annotations	1.0	null
H3K36me3_GM12878_hg19_2	ENCODE Transcription Factor Binding Site Profiles	1.0	null
CPC-N	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.03489
monoallellically	GeneRIF Biological Term Annotations	1.0	null
controlled	GeneRIF Biological Term Annotations	1.0	null
interacts	GeneRIF Biological Term Annotations	1.0	null
cll	GeneRIF Biological Term Annotations	1.0	null
SIN3B-21632747-MESC-MOUSE	ChEA Transcription Factor Binding Site Profiles	1.0	null
rpii	GeneRIF Biological Term Annotations	1.0	null
mir161	GeneRIF Biological Term Annotations	1.0	null
host	GeneRIF Biological Term Annotations	1.0	null
Acute Kidney Injury	CTD Gene-Disease Associations	1.0	1.03678
glucocorticoids	GeneRIF Biological Term Annotations	1.0	null
inhibits	GeneRIF Biological Term Annotations	1.0	null
EFM-192B	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.96269
affect	GeneRIF Biological Term Annotations	1.0	null
OUMS-23	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	2.56398
thus	GeneRIF Biological Term Annotations	1.0	null
Abnormalities, Drug-Induced	CTD Gene-Disease Associations	1.0	1.15933
mir15a161	GeneRIF Biological Term Annotations	1.0	null
Demyelinating Diseases	CTD Gene-Disease Associations	1.0	1.20751
SIN3B	ChEA Transcription Factor Targets	1.0	null
mir15areckmatrix	GeneRIF Biological Term Annotations	1.0	null
Nerve Degeneration	CTD Gene-Disease Associations	1.0	1.28672
gastric	GeneRIF Biological Term Annotations	1.0	null
mir196ab	GeneRIF Biological Term Annotations	1.0	null
C-33 A	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.97347
overall	GeneRIF Biological Term Annotations	1.0	null
restoration	GeneRIF Biological Term Annotations	1.0	null
cmybmir15a	GeneRIF Biological Term Annotations	1.0	null
OVSAHO	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.64866
CALU1	CCLE Cell Line Gene CNV Profiles	-1.0	-2.09087
Lung Diseases	CTD Gene-Disease Associations	1.0	1.02485
importance	GeneRIF Biological Term Annotations	1.0	null
Micronuclei, Chromosome-Defective	CTD Gene-Disease Associations	1.0	1.12634
H3K36me3_ES-Bruce4_mm9_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
direct	GeneRIF Biological Term Annotations	1.0	null
diabeticlike	GeneRIF Biological Term Annotations	1.0	null
downregulating	GeneRIF Biological Term Annotations	1.0	null
alpha	GeneRIF Biological Term Annotations	1.0	null
regulate	GeneRIF Biological Term Annotations	1.0	null
hbv	GeneRIF Biological Term Annotations	1.0	null
suggesting	GeneRIF Biological Term Annotations	1.0	null
low	GeneRIF Biological Term Annotations	1.0	null
mirna15a16	GeneRIF Biological Term Annotations	1.0	null
bmscs	GeneRIF Biological Term Annotations	1.0	null
NCIH2073	CCLE Cell Line Gene CNV Profiles	-1.0	-1.41148
H3K36me3_U2OS_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
L428	CCLE Cell Line Gene CNV Profiles	-1.0	-1.43833
manner	GeneRIF Biological Term Annotations	1.0	null
EVSA-T	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.7275
H3K4me1_G1E-ER4_mm9_2	ENCODE Histone Modification Site Profiles	1.0	null
NCI-H1975	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.68738
vivo	GeneRIF Biological Term Annotations	1.0	null
profiling	GeneRIF Biological Term Annotations	1.0	null
CTCF_fibroblast of dermis_hg19_1	ENCODE Transcription Factor Binding Site Profiles	1.0	null
mitogen	GeneRIF Biological Term Annotations	1.0	null
HCC1576	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.46999
TAL1_01_41	KnockTF Gene Expression Profiles with Transcription Factor Perturbations	-1.0	-0.58807
mir15a16	GeneRIF Biological Term Annotations	1.0	null
involves	GeneRIF Biological Term Annotations	1.0	null
ap4	GeneRIF Biological Term Annotations	1.0	null
MDA-MB-157	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.27877
apoptopsis	GeneRIF Biological Term Annotations	1.0	null
deleted	GeneRIF Biological Term Annotations	1.0	null
MM.1S	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.917304
endogenous	GeneRIF Biological Term Annotations	1.0	null
mrnas	GeneRIF Biological Term Annotations	1.0	null
e2f	GeneRIF Biological Term Annotations	1.0	null
cardiomyocyte	GeneRIF Biological Term Annotations	1.0	null
placenta	GeneRIF Biological Term Annotations	1.0	null
G111	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	0.961874
POLR2A_MCF-7_hg19_3	ENCODE Transcription Factor Binding Site Profiles	1.0	null
correlate	GeneRIF Biological Term Annotations	1.0	null
malignancies	GeneRIF Biological Term Annotations	1.0	null
serotonin	GeneRIF Biological Term Annotations	1.0	null
U-937	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.71714
SW 1463	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	1.0	1.51404
NCI-H522	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-1.22602
MDA-MB-134-VI	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.927922
SK-MM-2	Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles	-1.0	-0.917304